Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-25 19:20:22 (97603): Detected: vboxwrapper 26206
2025-02-25 19:20:22 (97603): Detected: BOINC client v8.0.2
2025-02-25 19:20:22 (97603): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2025-02-25 19:20:22 (97603): Detected: Sandbox Configuration Enabled
2025-02-25 19:20:22 (97603): Successfully copied 'init_data.xml' to the shared directory.
2025-02-25 19:20:22 (97603): Create VM. (boinc_68e17dc7602adb92, slot#5)
2025-02-25 19:20:22 (97603): Setting Memory Size for VM. (4800MB)
2025-02-25 19:20:22 (97603): Setting CPU Count for VM. (8)
2025-02-25 19:20:22 (97603): Setting Chipset Options for VM.
2025-02-25 19:20:23 (97603): Setting Graphics Controller Options for VM.
2025-02-25 19:20:23 (97603): Setting Boot Options for VM.
2025-02-25 19:20:23 (97603): Setting Network Configuration for NAT.
2025-02-25 19:20:23 (97603): Enabling VM Network Access.
2025-02-25 19:20:23 (97603): Disabling USB Support for VM.
2025-02-25 19:20:23 (97603): Disabling COM Port Support for VM.
2025-02-25 19:20:23 (97603): Disabling Audio Support for VM.
2025-02-25 19:20:23 (97603): Disabling Clipboard Support for VM.
2025-02-25 19:20:23 (97603): Disabling Drag and Drop Support for VM.
2025-02-25 19:20:23 (97603): Adding storage controller(s) to VM.
2025-02-25 19:20:23 (97603): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-25 19:20:25 (97603): Adding VirtualBox Guest Additions to VM.
2025-02-25 19:20:25 (97603): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-25 19:20:25 (97603): forwarding host port 49233 to guest port 80
2025-02-25 19:20:25 (97603): Enabling remote desktop for VM.
2025-02-25 19:20:25 (97603): Required extension pack not installed, remote desktop not enabled.
2025-02-25 19:20:25 (97603): Enabling shared directory for VM.
2025-02-25 19:20:25 (97603): Starting VM using VBoxManage interface. (boinc_68e17dc7602adb92, slot#5)
2025-02-25 19:20:29 (97603): Successfully started VM. (PID = '97677')
2025-02-25 19:20:29 (97603): Reporting VM Process ID to BOINC.
2025-02-25 19:20:29 (97603): Guest Log: BIOS: VirtualBox 7.1.4
2025-02-25 19:20:29 (97603): Guest Log: CPUID EDX: 0x178bfbff
2025-02-25 19:20:29 (97603): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-25 19:20:29 (97603): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-25 19:20:29 (97603): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-25 19:20:29 (97603): Detected: Web Application Enabled (http://localhost:49233)
2025-02-25 19:20:29 (97603): Preference change detected
2025-02-25 19:20:29 (97603): Setting CPU throttle for VM. (80%)
2025-02-25 19:20:29 (97603): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-25 19:20:31 (97603): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-25 19:20:31 (97603): Guest Log: BIOS: Booting from Hard Disk...
2025-02-25 19:20:33 (97603): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-25 19:20:33 (97603): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-25 19:20:33 (97603): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-25 19:20:33 (97603): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-25 19:20:33 (97603): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-25 19:20:33 (97603): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-25 19:20:33 (97603): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-25 19:20:33 (97603): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-25 19:20:33 (97603): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-25 19:20:33 (97603): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-25 19:20:33 (97603): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-25 19:20:33 (97603): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-25 19:20:33 (97603): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-25 19:20:33 (97603): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-25 19:20:33 (97603): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-25 19:20:33 (97603): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-25 19:20:33 (97603): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-25 19:20:33 (97603): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-25 19:20:33 (97603): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-25 19:20:33 (97603): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-25 19:20:33 (97603): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-25 19:20:33 (97603): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-25 19:20:33 (97603): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-25 19:20:33 (97603): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-25 19:20:33 (97603): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-25 19:20:33 (97603): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-25 19:20:33 (97603): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-25 19:20:33 (97603): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-25 19:20:33 (97603): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-25 19:20:33 (97603): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-25 19:20:33 (97603): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-25 19:20:33 (97603): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-25 19:20:39 (97603): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-25 19:20:39 (97603): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-25 19:20:45 (97603): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-25 19:20:45 (97603): Guest Log: 00:00:00.000095 main     Log opened 2025-02-26T00:20:43.729188000Z
2025-02-25 19:20:45 (97603): Guest Log: 00:00:00.000208 main     OS Product: Linux
2025-02-25 19:20:45 (97603): Guest Log: 00:00:00.000252 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-25 19:20:45 (97603): Guest Log: 00:00:00.000292 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-25 19:20:45 (97603): Guest Log: 00:00:00.000333 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-25 19:20:45 (97603): Guest Log: 00:00:00.000334 main     Process ID: 1371
2025-02-25 19:20:45 (97603): Guest Log: 00:00:00.000334 main     Package type: LINUX_64BITS_GENERIC
2025-02-25 19:20:45 (97603): Guest Log: 00:00:00.001908 main     5.2.32 r132073 started. Verbose level = 0
2025-02-25 19:20:45 (97603): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-25 19:20:45 (97603): Guest Log: [INFO] Mounting shared directory
2025-02-25 19:20:45 (97603): Guest Log: [INFO] Checking for init_data.xml
2025-02-25 19:20:52 (97603): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-25 19:20:52 (97603): Guest Log: [INFO] Detected branch: prod
2025-02-25 19:20:52 (97603): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-25 19:20:52 (97603): Guest Log: Copying input files
2025-02-25 19:20:55 (97603): Guest Log: Copied input files into RunAtlas.
2025-02-25 19:20:55 (97603): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-25 19:20:55 (97603): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-25 19:20:55 (97603): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-25 19:20:55 (97603): Guest Log: Further information can be found at the LHC@home message board.
2025-02-25 19:21:04 (97603): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-25 19:21:05 (97603): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-25 19:21:05 (97603): Guest Log: 2.6.3.0 1653 0 30008 143057 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-02-25 19:21:06 (97603): Guest Log: copied the webapp to /var/www
2025-02-25 19:21:06 (97603): Guest Log: ATHENA_PROC_NUMBER=8
2025-02-25 19:21:06 (97603): Guest Log: ATHENA_CORE_NUMBER=8
2025-02-25 19:21:06 (97603): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-25 19:21:06 (97603): Guest Log:  *** Starting ATLAS job. (PandaID=6531002279 taskID=43401171) ***
2025-02-25 20:40:56 (97603): Guest Log:  *** Job finished ***
2025-02-25 20:40:56 (97603): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-25 20:40:56 (97603): Guest Log: 2025-02-26 01:40:39,668 | INFO     | [job] control thread has finished
2025-02-25 20:40:56 (97603): Guest Log: 2025-02-26 01:40:39,986 | INFO     | [payload] control thread has finished
2025-02-25 20:40:56 (97603): Guest Log: 2025-02-26 01:40:41,552 | INFO     | [data] queue_monitor thread has finished
2025-02-25 20:40:56 (97603): Guest Log: 2025-02-26 01:40:42,685 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140577516218176)>', '<ExcThread(monitor, started 140577081382656)>']
2025-02-25 20:40:56 (97603): Guest Log: 2025-02-26 01:40:43,621 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-25 20:40:56 (97603): Guest Log: 2025-02-26 01:40:43,621 | INFO     | [monitor] control thread has ended
2025-02-25 20:40:56 (97603): Guest Log: 2025-02-26 01:40:47,699 | INFO     | all workflow threads have been joined
2025-02-25 20:40:56 (97603): Guest Log: 2025-02-26 01:40:47,699 | INFO     | end of generic workflow (traces error code: 0)
2025-02-25 20:40:56 (97603): Guest Log: 2025-02-26 01:40:47,700 | INFO     | traces error code: 0
2025-02-25 20:40:56 (97603): Guest Log: 2025-02-26 01:40:47,700 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-25 20:40:56 (97603): Guest Log: 2025-02-26 01:40:47,760 [wrapper] ==== pilot stdout END ====
2025-02-25 20:40:56 (97603): Guest Log: 2025-02-26 01:40:47,767 [wrapper] ==== wrapper stdout RESUME ====
2025-02-25 20:40:56 (97603): Guest Log: 2025-02-26 01:40:47,774 [wrapper] pilotpid: 6011
2025-02-25 20:40:56 (97603): Guest Log: 2025-02-26 01:40:47,781 [wrapper] Pilot exit status: 0
2025-02-25 20:40:56 (97603): Guest Log: 2025-02-26 01:40:47,882 [wrapper] pandaids: 6531002279
2025-02-25 20:40:56 (97603): Guest Log: 2025-02-26 01:40:47,928 [wrapper] cleanup supervisor_pilot 31735 6012
2025-02-25 20:40:56 (97603): Guest Log: 2025-02-26 01:40:47,935 [wrapper] Test setup, not cleaning
2025-02-25 20:40:56 (97603): Guest Log: 2025-02-26 01:40:47,950 [wrapper] apfmon messages muted
2025-02-25 20:40:56 (97603): Guest Log: 2025-02-26 01:40:47,957 [wrapper] ==== wrapper stdout END ====
2025-02-25 20:40:56 (97603): Guest Log: 2025-02-26 01:40:47,964 [wrapper] ==== wrapper stderr END ====
2025-02-25 20:40:56 (97603): Guest Log:  *** Error codes and diagnostics ***
2025-02-25 20:40:56 (97603): Guest Log:     "exeErrorCode": 0,
2025-02-25 20:40:56 (97603): Guest Log:     "exeErrorDiag": "",
2025-02-25 20:40:56 (97603): Guest Log:     "pilotErrorCode": 0,
2025-02-25 20:40:56 (97603): Guest Log:     "pilotErrorDiag": "",
2025-02-25 20:40:56 (97603): Guest Log:  *** Listing of results directory ***
2025-02-25 20:40:56 (97603): Guest Log: total 180288
2025-02-25 20:40:56 (97603): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 25 21:07 pilot3.tar.gz
2025-02-25 20:40:56 (97603): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 25 21:38 queuedata.json
2025-02-25 20:40:56 (97603): Guest Log: -rwx------. 1 atlas atlas     35865 Feb 25 21:38 runpilot2-wrapper.sh
2025-02-25 20:40:56 (97603): Guest Log: -rw-r-----. 1 atlas atlas     17569 Feb 26 00:20 start_atlas.sh
2025-02-25 20:40:56 (97603): Guest Log: -rw-r-----. 1 atlas atlas    503555 Feb 26 00:20 input.tar.gz
2025-02-25 20:40:56 (97603): Guest Log: -rw-r--r--. 1 atlas atlas      8524 Feb 26 00:20 init_data.xml
2025-02-25 20:40:56 (97603): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 26 00:20 EVNT.43401169._000061.pool.root.1 -> /data/./ATLAS.root_0
2025-02-25 20:40:56 (97603): Guest Log: -rw-r--r--. 1 atlas atlas      2543 Feb 26 00:21 pandaJob.out
2025-02-25 20:40:56 (97603): Guest Log: -rw-------. 1 atlas atlas       424 Feb 26 00:21 setup.sh.local
2025-02-25 20:40:56 (97603): Guest Log: -rw-------. 1 atlas atlas    987490 Feb 26 00:21 agis_schedconf.cvmfs.json
2025-02-25 20:40:56 (97603): Guest Log: -rw-------. 1 atlas atlas   1573632 Feb 26 00:21 agis_ddmendpoints.agis.ALL.json
2025-02-25 20:40:56 (97603): Guest Log: drwx------. 4 atlas atlas      4096 Feb 26 00:21 pilot3
2025-02-25 20:40:56 (97603): Guest Log: -rw-------. 1 atlas atlas 179840490 Feb 26 01:39 HITS.43401171._001520.pool.root.1
2025-02-25 20:40:56 (97603): Guest Log: -rw-------. 1 atlas atlas        95 Feb 26 01:40 pilot_heartbeat.json
2025-02-25 20:40:56 (97603): Guest Log: -rw-------. 1 atlas atlas      1034 Feb 26 01:40 memory_monitor_summary.json
2025-02-25 20:40:56 (97603): Guest Log: -rw-------. 1 atlas atlas    274201 Feb 26 01:40 log.43401171._001520.job.log.tgz.1
2025-02-25 20:40:56 (97603): Guest Log: -rw-------. 1 atlas atlas      7712 Feb 26 01:40 heartbeat.json
2025-02-25 20:40:56 (97603): Guest Log: -rw-------. 1 atlas atlas      4398 Feb 26 01:40 pilotlog.txt
2025-02-25 20:40:56 (97603): Guest Log: -rw-------. 1 atlas atlas    246401 Feb 26 01:40 log.43401171._001520.job.log.1
2025-02-25 20:40:56 (97603): Guest Log: -rw-------. 1 atlas atlas       357 Feb 26 01:40 output.list
2025-02-25 20:40:56 (97603): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 26 01:40 runtime_log
2025-02-25 20:40:56 (97603): Guest Log: -rw-------. 1 atlas atlas    542720 Feb 26 01:40 result.tar.gz
2025-02-25 20:40:56 (97603): Guest Log: -rw-r--r--. 1 atlas atlas     10961 Feb 26 01:40 runtime_log.err
2025-02-25 20:40:56 (97603): Guest Log: -rw-------. 1 atlas atlas       665 Feb 26 01:40 r9LODmSoH76n9Rq4apOajLDm4fhM0noT9bVoFjIUDmbGgKDmPBhXon.diag
2025-02-25 20:40:56 (97603): Guest Log: Looking for outputfile HITS.43401171._001520.pool.root.1
2025-02-25 20:40:56 (97603): Guest Log: HITS file was successfully produced
2025-02-25 20:40:56 (97603): Guest Log: -rw-------. 1 atlas atlas 179840490 Feb 26 01:39 /home/atlas/RunAtlas/HITS.43401171._001520.pool.root.1
2025-02-25 20:40:56 (97603): Guest Log: Successfully finished the ATLAS job!
2025-02-25 20:40:56 (97603): Guest Log: Copying the results back to the shared directory!
2025-02-25 20:40:56 (97603): Guest Log:  *** Contents of shared directory: ***
2025-02-25 20:40:56 (97603): Guest Log: total 243540
2025-02-25 20:40:56 (97603): Guest Log: -rw-rw----. 1 root root 248300698 Feb 26 00:20 ATLAS.root_0
2025-02-25 20:40:56 (97603): Guest Log: -rw-rw-r--. 1 root root      8524 Feb 26 00:20 init_data.xml
2025-02-25 20:40:56 (97603): Guest Log: -rw-rw----. 1 root root    503555 Feb 26 00:20 input.tar.gz
2025-02-25 20:40:56 (97603): Guest Log: -rw-r--r--. 1 root root    542720 Feb 26  2025 result.tar.gz
2025-02-25 20:40:56 (97603): Guest Log: -rw-rw----. 1 root root     17569 Feb 26 00:20 start_atlas.sh
2025-02-25 20:40:56 (97603): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-25 20:40:56 (97603): VM Completion File Detected.
2025-02-25 20:40:56 (97603): Powering off VM.
2025-02-25 20:40:56 (97603): Successfully stopped VM.
2025-02-25 20:40:56 (97603): Deregistering VM. (boinc_68e17dc7602adb92, slot#5)
2025-02-25 20:40:56 (97603): Removing network bandwidth throttle group from VM.
2025-02-25 20:40:56 (97603): Removing VM from VirtualBox.
20:41:02 (97603): called boinc_finish(0)

</stderr_txt>
]]>

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