Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
22:39:29 (2749057): wrapper (7.7.26015): starting
22:39:29 (2749057): wrapper: running run_atlas (--nthreads 12)
[2025-02-25 22:39:29] Arguments: --nthreads 12
[2025-02-25 22:39:29] Threads: 12
[2025-02-25 22:39:29] Checking for CVMFS
[2025-02-25 22:39:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 22:39:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 22:39:29] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 22:39:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 22:39:29] 2.12.6.0 10657 2216 55440 143052 1 61 4283088 6291457 921 130560 5 2153158 99.997 142631 559 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-02-25 22:39:29] CVMFS is ok
[2025-02-25 22:39:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 22:39:29] Small home clusters do not require a local http proxy but it is suggested if
[2025-02-25 22:39:29] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-02-25 22:39:29] Further information can be found at the LHC@home message board.
[2025-02-25 22:39:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 22:39:29] Checking for apptainer binary...
[2025-02-25 22:39:29] apptainer is not installed, using version from CVMFS
[2025-02-25 22:39:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 22:39:29] pm101
[2025-02-25 22:39:29] apptainer works
[2025-02-25 22:39:29] Set ATHENA_PROC_NUMBER=12
[2025-02-25 22:39:29] Set ATHENA_CORE_NUMBER=12
[2025-02-25 22:39:30] Starting ATLAS job with PandaID=6531001267
[2025-02-25 22:39:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 23:23:49]  *** The last 200 lines of the pilot log: ***
[2025-02-25 23:23:49]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-02-25 23:23:49]  is_altstaged=None
[2025-02-25 23:23:49]  is_tar=False
[2025-02-25 23:23:49]  lfn=log.43401171._001293.job.log.tgz.1
[2025-02-25 23:23:49]  mtime=0
[2025-02-25 23:23:49]  protocol_id=None
[2025-02-25 23:23:49]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-25 23:23:49]  replicas=None
[2025-02-25 23:23:49]  scope=mc23_13p6TeV
[2025-02-25 23:23:49]  status=None
[2025-02-25 23:23:49]  status_code=0
[2025-02-25 23:23:49]  storage_token=
[2025-02-25 23:23:49]  surl=/var/lib/boinc-client/slots/0/PanDA_Pilot-6531001267/log.43401171._001293.job.log.tgz.1
[2025-02-25 23:23:49]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b9/c8/log.43401171._001293.job.log.tgz.1
[2025-02-25 23:23:49]  workdir=None
[2025-02-25 23:23:49] ]
[2025-02-25 23:23:49] 2025-02-25 22:23:21,283 | INFO     | transferring file log.43401171._001293.job.log.tgz.1 from /var/lib/boinc-client/slots/0/PanDA_Pilot-6531001267/log.43401171._001293.job.log.tgz.1 to /var/lib/boinc
[2025-02-25 23:23:49] 2025-02-25 22:23:21,284 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-6531001267/log.43401171._001293.job.log.tgz.1 /var/lib/boinc-client/slots/0/log.434011
[2025-02-25 23:23:49] 2025-02-25 22:23:21,296 | INFO     | adding to output.list: log.43401171._001293.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b9/c8/log.43401171._001293.job.log.tg
[2025-02-25 23:23:49] 2025-02-25 22:23:21,297 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-25 23:23:49] 2025-02-25 22:23:21,297 | INFO     | summary of transferred files:
[2025-02-25 23:23:49] 2025-02-25 22:23:21,297 | INFO     |  -- lfn=log.43401171._001293.job.log.tgz.1, status_code=0, status=transferred
[2025-02-25 23:23:49] 2025-02-25 22:23:21,297 | INFO     | stage-out finished correctly
[2025-02-25 23:23:49] 2025-02-25 22:23:23,975 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-25 23:23:49] 2025-02-25 22:23:24,440 | WARNING  | process 2760531 can no longer be monitored (due to stat problems) - aborting
[2025-02-25 23:23:49] 2025-02-25 22:23:24,440 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6531001267/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 23:23:49] 2025-02-25 22:23:24,517 | INFO     | number of running child processes to parent process 2760531: 1
[2025-02-25 23:23:49] 2025-02-25 22:23:24,518 | INFO     | maximum number of monitored processes: 6
[2025-02-25 23:23:49] 2025-02-25 22:23:26,396 | INFO     | job 6531001267 has state=finished
[2025-02-25 23:23:49] 2025-02-25 22:23:26,396 | INFO     | preparing for final server update for job 6531001267 in state='finished'
[2025-02-25 23:23:49] 2025-02-25 22:23:27,021 | INFO     | monitor loop #201: job 0:6531001267 is in state 'finished'
[2025-02-25 23:23:49] 2025-02-25 22:23:27,021 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 23:23:49] 2025-02-25 22:23:27,028 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-02-25 23:23:49] 2025-02-25 22:23:27,029 | INFO     | this job has now completed (state=finished)
[2025-02-25 23:23:49] 2025-02-25 22:23:27,029 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-25 23:23:49] 2025-02-25 22:23:27,029 | INFO     | log transfer has been attempted: DONE
[2025-02-25 23:23:49] 2025-02-25 22:23:27,029 | INFO     | job 6531001267 has finished - writing final server update
[2025-02-25 23:23:49] 2025-02-25 22:23:27,029 | INFO     | total number of processed events: 400 (read)
[2025-02-25 23:23:49] 2025-02-25 22:23:27,031 | INFO     | executing command: lscpu
[2025-02-25 23:23:49] 2025-02-25 22:23:27,058 | INFO     | found 28 cores (14 cores per socket, 2 sockets)
[2025-02-25 23:23:49] 2025-02-25 22:23:27,069 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-25 23:23:49] 2025-02-25 22:23:29,403 | INFO     | CPU arch script returned: x86-64-v3
[2025-02-25 23:23:49] 2025-02-25 22:23:29,404 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6531001267/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 23:23:49] 2025-02-25 22:23:29,405 | INFO     | extracted standard info from prmon json
[2025-02-25 23:23:49] 2025-02-25 22:23:29,405 | INFO     | extracted standard memory fields from prmon json
[2025-02-25 23:23:49] 2025-02-25 22:23:29,405 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-25 23:23:49] 2025-02-25 22:23:29,405 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 23:23:49] 2025-02-25 22:23:29,406 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 23:23:49] 2025-02-25 22:23:29,407 | INFO     | fitting pss+swap vs Time
[2025-02-25 23:23:49] 2025-02-25 22:23:29,407 | INFO     | model: linear, x: [1740519902.0, 1740519963.0, 1740520024.0, 1740520085.0, 1740520146.0, 1740520207.0, 1740520268.0, 1740520329.0, 1740520390.0, 1740520451.0, 1740
[2025-02-25 23:23:49] 2025-02-25 22:23:29,407 | INFO     | sum of square deviations: 14456085.0
[2025-02-25 23:23:49] 2025-02-25 22:23:29,408 | INFO     | sum of deviations: -1411138010.0
[2025-02-25 23:23:49] 2025-02-25 22:23:29,408 | INFO     | mean x: 1740520969.5
[2025-02-25 23:23:49] 2025-02-25 22:23:29,408 | INFO     | mean y: 2978629.222222222
[2025-02-25 23:23:49] 2025-02-25 22:23:29,408 | INFO     | -- intersect: 169904808707.24823
[2025-02-25 23:23:49] 2025-02-25 22:23:29,408 | INFO     | intersect: 169904808707.24823
[2025-02-25 23:23:49] 2025-02-25 22:23:29,409 | INFO     | chi2: 0.09559406614327688
[2025-02-25 23:23:49] 2025-02-25 22:23:29,409 | INFO     | -- intersect: 169904808707.24823
[2025-02-25 23:23:49] 2025-02-25 22:23:29,409 | INFO     | current memory leak: -97.62 B/s (using 36 data points, chi2=0.10)
[2025-02-25 23:23:49] 2025-02-25 22:23:29,409 | INFO     | ..............................
[2025-02-25 23:23:49] 2025-02-25 22:23:29,410 | INFO     | . Timing measurements:
[2025-02-25 23:23:49] 2025-02-25 22:23:29,410 | INFO     | . get job = 0 s
[2025-02-25 23:23:49] 2025-02-25 22:23:29,410 | INFO     | . initial setup = 1 s
[2025-02-25 23:23:49] 2025-02-25 22:23:29,410 | INFO     | . payload setup = 3 s
[2025-02-25 23:23:49] 2025-02-25 22:23:29,410 | INFO     | . stage-in = 0 s
[2025-02-25 23:23:49] 2025-02-25 22:23:29,410 | INFO     | . payload execution = 2602 s
[2025-02-25 23:23:49] 2025-02-25 22:23:29,410 | INFO     | . stage-out = 0 s
[2025-02-25 23:23:49] 2025-02-25 22:23:29,410 | INFO     | . log creation = 0 s
[2025-02-25 23:23:49] 2025-02-25 22:23:29,410 | INFO     | ..............................
[2025-02-25 23:23:49] 2025-02-25 22:23:29,497 | INFO     | 
[2025-02-25 23:23:49] 2025-02-25 22:23:29,497 | INFO     | job summary report
[2025-02-25 23:23:49] 2025-02-25 22:23:29,497 | INFO     | --------------------------------------------------
[2025-02-25 23:23:49] 2025-02-25 22:23:29,498 | INFO     | PanDA job id: 6531001267
[2025-02-25 23:23:49] 2025-02-25 22:23:29,498 | INFO     | task id: 43401171
[2025-02-25 23:23:49] 2025-02-25 22:23:29,498 | INFO     | errors: (none)
[2025-02-25 23:23:49] 2025-02-25 22:23:29,498 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 23:23:49] 2025-02-25 22:23:29,498 | INFO     | pilot state: finished 
[2025-02-25 23:23:49] 2025-02-25 22:23:29,498 | INFO     | transexitcode: 0
[2025-02-25 23:23:49] 2025-02-25 22:23:29,498 | INFO     | exeerrorcode: 0
[2025-02-25 23:23:49] 2025-02-25 22:23:29,498 | INFO     | exeerrordiag: 
[2025-02-25 23:23:49] 2025-02-25 22:23:29,499 | INFO     | exitcode: 0
[2025-02-25 23:23:49] 2025-02-25 22:23:29,499 | INFO     | exitmsg: OK
[2025-02-25 23:23:49] 2025-02-25 22:23:29,499 | INFO     | cpuconsumptiontime: 26092 s
[2025-02-25 23:23:49] 2025-02-25 22:23:29,499 | INFO     | nevents: 400
[2025-02-25 23:23:49] 2025-02-25 22:23:29,499 | INFO     | neventsw: 0
[2025-02-25 23:23:49] 2025-02-25 22:23:29,499 | INFO     | pid: 2760531
[2025-02-25 23:23:49] 2025-02-25 22:23:29,499 | INFO     | pgrp: 2760531
[2025-02-25 23:23:49] 2025-02-25 22:23:29,499 | INFO     | corecount: 12
[2025-02-25 23:23:49] 2025-02-25 22:23:29,499 | INFO     | event service: False
[2025-02-25 23:23:49] 2025-02-25 22:23:29,500 | INFO     | sizes: {0: 2370390, 3: 2370596, 11: 2370624, 2610: 2395779, 2611: 2404734, 2614: 2404790, 2620: 2405088}
[2025-02-25 23:23:49] 2025-02-25 22:23:29,500 | INFO     | --------------------------------------------------
[2025-02-25 23:23:49] 2025-02-25 22:23:29,500 | INFO     | 
[2025-02-25 23:23:49] 2025-02-25 22:23:29,500 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-02-25 23:23:49] 2025-02-25 22:23:29,513 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 23:23:49] 2025-02-25 22:23:29,514 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 23:23:49] 2025-02-25 22:23:29,514 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 23:23:49] 2025-02-25 22:23:29,514 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 23:23:49] 2025-02-25 22:23:29,514 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 23:23:49] 2025-02-25 22:23:29,514 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 23:23:49] 2025-02-25 22:23:29,514 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 23:23:49] 2025-02-25 22:23:29,514 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 23:23:49] 2025-02-25 22:23:29,514 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 23:23:49] 2025-02-25 22:23:29,514 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 23:23:49] 2025-02-25 22:23:29,514 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 23:23:49] 2025-02-25 22:23:29,515 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 23:23:49] 2025-02-25 22:23:29,515 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 23:23:49] 2025-02-25 22:23:29,515 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 23:23:49] 2025-02-25 22:23:29,515 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 23:23:49] 2025-02-25 22:23:29,515 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 23:23:49] 2025-02-25 22:23:29,515 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 23:23:49] 2025-02-25 22:23:29,515 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 23:23:49] 2025-02-25 22:23:29,515 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 23:23:49] 2025-02-25 22:23:29,515 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 23:23:49] 2025-02-25 22:23:29,515 | INFO     | job 6531001267 has completed (purged errors)
[2025-02-25 23:23:49] 2025-02-25 22:23:29,515 | INFO     | overall cleanup function is called
[2025-02-25 23:23:49] 2025-02-25 22:23:30,521 | INFO     | --- collectZombieJob: --- 10, [2760531]
[2025-02-25 23:23:49] 2025-02-25 22:23:30,521 | INFO     | zombie collector waiting for pid 2760531
[2025-02-25 23:23:49] 2025-02-25 22:23:30,522 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 23:23:49] 2025-02-25 22:23:30,522 | INFO     | collected zombie processes
[2025-02-25 23:23:49] 2025-02-25 22:23:30,522 | INFO     | will attempt to kill all subprocesses of pid=2760531
[2025-02-25 23:23:49] 2025-02-25 22:23:30,600 | INFO     | process IDs to be killed: [2760531] (in reverse order)
[2025-02-25 23:23:49] 2025-02-25 22:23:30,690 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 23:23:49] 2025-02-25 22:23:30,690 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 23:23:49] 2025-02-25 22:23:30,698 | INFO     | did not find any defunct processes belonging to 2760531
[2025-02-25 23:23:49] 2025-02-25 22:23:30,704 | INFO     | did not find any defunct processes belonging to 2760531
[2025-02-25 23:23:49] 2025-02-25 22:23:30,704 | INFO     | ready for new job
[2025-02-25 23:23:49] 2025-02-25 22:23:30,704 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 23:23:49] 2025-02-25 22:23:30,705 | INFO     | **************************************
[2025-02-25 23:23:49] 2025-02-25 22:23:30,705 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 23:23:49] 2025-02-25 22:23:30,706 | INFO     | **************************************
[2025-02-25 23:23:49] 2025-02-25 22:23:30,706 | INFO     | 
[2025-02-25 23:23:49] 2025-02-25 22:23:30,707 | INFO     | architecture information:
[2025-02-25 23:23:49] 2025-02-25 22:23:30,707 | INFO     | executing command: cat /etc/os-release
[2025-02-25 23:23:49] 2025-02-25 22:23:30,717 | INFO     | cat /etc/os-release:
[2025-02-25 23:23:49] NAME="CentOS Linux"
[2025-02-25 23:23:49] VERSION="7 (Core)"
[2025-02-25 23:23:49] ID="centos"
[2025-02-25 23:23:49] ID_LIKE="rhel fedora"
[2025-02-25 23:23:49] VERSION_ID="7"
[2025-02-25 23:23:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 23:23:49] ANSI_COLOR="0;31"
[2025-02-25 23:23:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 23:23:49] HOME_URL="https://www.centos.org/"
[2025-02-25 23:23:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 23:23:49] 
[2025-02-25 23:23:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 23:23:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 23:23:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 23:23:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 23:23:49] 
[2025-02-25 23:23:49] 2025-02-25 22:23:30,717 | INFO     | **************************************
[2025-02-25 23:23:49] 2025-02-25 22:23:31,220 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-02-25 23:23:49] 2025-02-25 22:23:31,232 | INFO     | sufficient remaining disk space (897125974016 B)
[2025-02-25 23:23:49] 2025-02-25 22:23:31,232 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 23:23:49] 2025-02-25 22:23:31,232 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 23:23:49] 2025-02-25 22:23:31,232 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 23:23:49] 2025-02-25 22:23:31,232 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 23:23:49] 2025-02-25 22:23:31,233 | INFO     | aborting loop
[2025-02-25 23:23:49] 2025-02-25 22:23:31,533 | INFO     | all data control threads have been joined
[2025-02-25 23:23:49] 2025-02-25 22:23:31,596 | INFO     | all payload control threads have been joined
[2025-02-25 23:23:49] 2025-02-25 22:23:31,901 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 23:23:49] 2025-02-25 22:23:31,928 | INFO     | all job control threads have been joined
[2025-02-25 23:23:49] 2025-02-25 22:23:32,135 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 23:23:49] 2025-02-25 22:23:32,136 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 23:23:49] 2025-02-25 22:23:32,136 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 23:23:49] 2025-02-25 22:23:32,238 | INFO     | [job] retrieve thread has finished
[2025-02-25 23:23:49] 2025-02-25 22:23:32,238 | INFO     | [job] queue monitor thread has finished
[2025-02-25 23:23:49] 2025-02-25 22:23:32,238 | INFO     | [job] job monitor thread has finished
[2025-02-25 23:23:49] 2025-02-25 22:23:32,539 | INFO     | [data] control thread has finished
[2025-02-25 23:23:49] 2025-02-25 22:23:32,601 | INFO     | [payload] control thread has finished
[2025-02-25 23:23:49] 2025-02-25 22:23:32,616 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 23:23:49] 2025-02-25 22:23:32,738 | INFO     | [payload] failed_post thread has finished
[2025-02-25 23:23:49] 2025-02-25 22:23:32,934 | INFO     | [job] control thread has finished
[2025-02-25 23:23:49] 2025-02-25 22:23:33,207 | INFO     | [data] copytool_in thread has finished
[2025-02-25 23:23:49] 2025-02-25 22:23:33,266 | INFO     | [job] validate thread has finished
[2025-02-25 23:23:49] 2025-02-25 22:23:33,396 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 23:23:49] 2025-02-25 22:23:33,467 | INFO     | [payload] validate_post thread has finished
[2025-02-25 23:23:49] 2025-02-25 22:23:33,543 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 23:23:49] 2025-02-25 22:23:33,907 | INFO     | [data] copytool_out thread has finished
[2025-02-25 23:23:49] 2025-02-25 22:23:34,575 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 23:23:49] 2025-02-25 22:23:38,580 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 23:23:49] 2025-02-25 22:23:42,254 | INFO     | job.realtimelogging is not enabled
[2025-02-25 23:23:49] 2025-02-25 22:23:43,260 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 23:23:49] 2025-02-25 22:23:44,585 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129118729291584)>', '<ExcThread(monitor, started 129118293198592)>']
[2025-02-25 23:23:49] 2025-02-25 22:23:45,201 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 23:23:49] 2025-02-25 22:23:45,201 | INFO     | [monitor] control thread has ended
[2025-02-25 23:23:49] 2025-02-25 22:23:49,610 | INFO     | all workflow threads have been joined
[2025-02-25 23:23:49] 2025-02-25 22:23:49,610 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 23:23:49] 2025-02-25 22:23:49,611 | INFO     | traces error code: 0
[2025-02-25 23:23:49] 2025-02-25 22:23:49,611 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 23:23:49] 2025-02-25 22:23:49,686 [wrapper] ==== pilot stdout END ====
[2025-02-25 23:23:49] 2025-02-25 22:23:49,688 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 23:23:49] 2025-02-25 22:23:49,690 [wrapper] pilotpid: 2753077
[2025-02-25 23:23:49] 2025-02-25 22:23:49,692 [wrapper] Pilot exit status: 0
[2025-02-25 23:23:49] 2025-02-25 22:23:49,698 [wrapper] pandaids: 6531001267
[2025-02-25 23:23:49] 2025-02-25 22:23:49,744 [wrapper] cleanup supervisor_pilot 2828843 2753078
[2025-02-25 23:23:49] 2025-02-25 22:23:49,746 [wrapper] Test setup, not cleaning
[2025-02-25 23:23:49] 2025-02-25 22:23:49,749 [wrapper] apfmon messages muted
[2025-02-25 23:23:49] 2025-02-25 22:23:49,750 [wrapper] ==== wrapper stdout END ====
[2025-02-25 23:23:49] 2025-02-25 22:23:49,752 [wrapper] ==== wrapper stderr END ====
[2025-02-25 23:23:49]  *** Error codes and diagnostics ***
[2025-02-25 23:23:49]     "exeErrorCode": 0,
[2025-02-25 23:23:49]     "exeErrorDiag": "",
[2025-02-25 23:23:49]     "pilotErrorCode": 0,
[2025-02-25 23:23:49]     "pilotErrorDiag": "",
[2025-02-25 23:23:49]  *** Listing of results directory ***
[2025-02-25 23:23:49] total 427013
[2025-02-25 23:23:49] -rw-r--r-- 1 boinc boinc    491065 Feb 25 22:07 pilot3.tar.gz
[2025-02-25 23:23:49] -rwx------ 1 boinc boinc     35865 Feb 25 22:38 runpilot2-wrapper.sh
[2025-02-25 23:23:49] -rw-r--r-- 1 boinc boinc      5118 Feb 25 22:38 queuedata.json
[2025-02-25 23:23:49] -rw-r--r-- 1 boinc boinc       100 Feb 25 22:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 23:23:49] -rwxr-xr-x 1 boinc boinc      7986 Feb 25 22:39 run_atlas
[2025-02-25 23:23:49] -rw-r--r-- 1 boinc boinc       105 Feb 25 22:39 job.xml
[2025-02-25 23:23:49] -rw-r--r-- 2 boinc boinc 250047717 Feb 25 22:39 EVNT.43401169._000052.pool.root.1
[2025-02-25 23:23:49] -rw-r--r-- 1 boinc boinc      6819 Feb 25 22:39 init_data.xml
[2025-02-25 23:23:49] -rw-r--r-- 2 boinc boinc     17569 Feb 25 22:39 start_atlas.sh
[2025-02-25 23:23:49] drwxrwx--x 2 boinc boinc         5 Feb 25 22:39 shared
[2025-02-25 23:23:49] -rw-r--r-- 2 boinc boinc    503554 Feb 25 22:39 input.tar.gz
[2025-02-25 23:23:49] -rw-r--r-- 1 boinc boinc         0 Feb 25 22:39 boinc_lockfile
[2025-02-25 23:23:49] -rw-r--r-- 1 boinc boinc      2542 Feb 25 22:39 pandaJob.out
[2025-02-25 23:23:49] -rw------- 1 boinc boinc       459 Feb 25 22:39 setup.sh.local
[2025-02-25 23:23:49] -rw------- 1 boinc boinc    987482 Feb 25 22:39 agis_schedconf.cvmfs.json
[2025-02-25 23:23:49] -rw------- 1 boinc boinc   1573632 Feb 25 22:39 agis_ddmendpoints.agis.ALL.json
[2025-02-25 23:23:49] drwx------ 4 boinc boinc        20 Feb 25 22:39 pilot3
[2025-02-25 23:23:49] -rw------- 1 boinc boinc        95 Feb 25 23:22 pilot_heartbeat.json
[2025-02-25 23:23:49] -rw------- 1 boinc boinc 184983320 Feb 25 23:22 HITS.43401171._001293.pool.root.1
[2025-02-25 23:23:49] -rw------- 1 boinc boinc      1037 Feb 25 23:23 memory_monitor_summary.json
[2025-02-25 23:23:49] -rw-r--r-- 1 boinc boinc        27 Feb 25 23:23 wrapper_checkpoint.txt
[2025-02-25 23:23:49] -rw-r--r-- 1 boinc boinc      8192 Feb 25 23:23 boinc_mmap_file
[2025-02-25 23:23:49] -rw-r--r-- 1 boinc boinc       529 Feb 25 23:23 boinc_task_state.xml
[2025-02-25 23:23:49] -rw------- 1 boinc boinc    330076 Feb 25 23:23 log.43401171._001293.job.log.tgz.1
[2025-02-25 23:23:49] -rw------- 1 boinc boinc      7703 Feb 25 23:23 heartbeat.json
[2025-02-25 23:23:49] -rw------- 1 boinc boinc      4295 Feb 25 23:23 pilotlog.txt
[2025-02-25 23:23:49] -rw------- 1 boinc boinc    285554 Feb 25 23:23 log.43401171._001293.job.log.1
[2025-02-25 23:23:49] -rw------- 1 boinc boinc       357 Feb 25 23:23 output.list
[2025-02-25 23:23:49] -rw-r--r-- 1 boinc boinc       620 Feb 25 23:23 runtime_log
[2025-02-25 23:23:49] -rw------- 1 boinc boinc    634880 Feb 25 23:23 result.tar.gz
[2025-02-25 23:23:49] -rw-r--r-- 1 boinc boinc     11442 Feb 25 23:23 runtime_log.err
[2025-02-25 23:23:49] -rw------- 1 boinc boinc       646 Feb 25 23:23 mT9MDmIoH76nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmc6wKDmXomELo.diag
[2025-02-25 23:23:49] -rw-r--r-- 1 boinc boinc     16149 Feb 25 23:23 stderr.txt
[2025-02-25 23:23:49] HITS file was successfully produced:
[2025-02-25 23:23:49] -rw------- 1 boinc boinc 184983320 Feb 25 23:22 shared/HITS.pool.root.1
[2025-02-25 23:23:49]  *** Contents of shared directory: ***
[2025-02-25 23:23:49] total 425651
[2025-02-25 23:23:49] -rw-r--r-- 2 boinc boinc 250047717 Feb 25 22:39 ATLAS.root_0
[2025-02-25 23:23:49] -rw-r--r-- 2 boinc boinc     17569 Feb 25 22:39 start_atlas.sh
[2025-02-25 23:23:49] -rw-r--r-- 2 boinc boinc    503554 Feb 25 22:39 input.tar.gz
[2025-02-25 23:23:49] -rw------- 1 boinc boinc 184983320 Feb 25 23:22 HITS.pool.root.1
[2025-02-25 23:23:49] -rw------- 1 boinc boinc    634880 Feb 25 23:23 result.tar.gz
23:23:50 (2749057): run_atlas exited; CPU time 26103.939547
23:23:50 (2749057): called boinc_finish(0)

</stderr_txt>
]]>

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