Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:47:35 (22496): wrapper (7.7.26015): starting
14:47:35 (22496): wrapper: running run_atlas (--nthreads 12)
[2025-02-25 14:47:35] Arguments: --nthreads 12
[2025-02-25 14:47:35] Threads: 12
[2025-02-25 14:47:35] Checking for CVMFS
[2025-02-25 14:47:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 14:47:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 14:47:36] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 14:47:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 14:47:36] 2.11.2.0 12163 293073 153520 143050 0 58 18337232 20275201 1 130560 0 24685603 99.986 8065595 42628 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-25 14:47:36] CVMFS is ok
[2025-02-25 14:47:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 14:47:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 14:47:36] Further information can be found at the LHC@home message board.
[2025-02-25 14:47:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 14:47:36] Checking for apptainer binary...
[2025-02-25 14:47:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 14:47:36] Running /usr/bin/apptainer --version
[2025-02-25 14:47:36] apptainer version 1.3.2-1.el7
[2025-02-25 14:47:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 14:47:37] c-205-20.aglt2.org
[2025-02-25 14:47:37] apptainer works
[2025-02-25 14:47:37] Set ATHENA_PROC_NUMBER=12
[2025-02-25 14:47:37] Set ATHENA_CORE_NUMBER=12
[2025-02-25 14:47:37] Starting ATLAS job with PandaID=6530729323
[2025-02-25 14:47:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 16:13:42]  *** The last 200 lines of the pilot log: ***
[2025-02-25 16:13:42]  lfn=log.43401163._001460.job.log.tgz.1
[2025-02-25 16:13:42]  mtime=0
[2025-02-25 16:13:42]  protocol_id=None
[2025-02-25 16:13:42]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-25 16:13:42]  replicas=None
[2025-02-25 16:13:42]  scope=mc23_13p6TeV
[2025-02-25 16:13:42]  status=None
[2025-02-25 16:13:42]  status_code=0
[2025-02-25 16:13:42]  storage_token=
[2025-02-25 16:13:42]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6530729323/log.43401163._001460.job.log.tgz.1
[2025-02-25 16:13:42]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/93/5e/log.43401163._001460.job.log.tgz.1
[2025-02-25 16:13:42]  workdir=None
[2025-02-25 16:13:42] ]
[2025-02-25 16:13:42] 2025-02-25 21:13:14,708 | INFO     | transferring file log.43401163._001460.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6530729323/log.43401163._001460.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-02-25 16:13:42] 2025-02-25 21:13:14,708 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6530729323/log.43401163._001460.job.log.tgz.1 /tmp/boinchome/slots/0/log.43401163._001460.job
[2025-02-25 16:13:42] 2025-02-25 21:13:14,729 | INFO     | adding to output.list: log.43401163._001460.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/93/5e/log.43401163._001460.job.log.tg
[2025-02-25 16:13:42] 2025-02-25 21:13:14,730 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-25 16:13:42] 2025-02-25 21:13:14,730 | INFO     | summary of transferred files:
[2025-02-25 16:13:42] 2025-02-25 21:13:14,731 | INFO     |  -- lfn=log.43401163._001460.job.log.tgz.1, status_code=0, status=transferred
[2025-02-25 16:13:42] 2025-02-25 21:13:14,731 | INFO     | stage-out finished correctly
[2025-02-25 16:13:42] 2025-02-25 21:13:14,823 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-25 16:13:42] 2025-02-25 21:13:16,588 | WARNING  | process 32594 can no longer be monitored (due to stat problems) - aborting
[2025-02-25 16:13:42] 2025-02-25 21:13:16,589 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6530729323/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 16:13:42] 2025-02-25 21:13:16,649 | INFO     | number of running child processes to parent process 32594: 1
[2025-02-25 16:13:42] 2025-02-25 21:13:16,649 | INFO     | maximum number of monitored processes: 6
[2025-02-25 16:13:42] 2025-02-25 21:13:17,241 | INFO     | job 6530729323 has state=finished
[2025-02-25 16:13:42] 2025-02-25 21:13:17,241 | INFO     | preparing for final server update for job 6530729323 in state='finished'
[2025-02-25 16:13:42] 2025-02-25 21:13:17,242 | INFO     | this job has now completed (state=finished)
[2025-02-25 16:13:42] 2025-02-25 21:13:17,242 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-25 16:13:42] 2025-02-25 21:13:17,242 | INFO     | log transfer has been attempted: DONE
[2025-02-25 16:13:42] 2025-02-25 21:13:17,243 | INFO     | job 6530729323 has finished - writing final server update
[2025-02-25 16:13:42] 2025-02-25 21:13:17,243 | INFO     | total number of processed events: 400 (read)
[2025-02-25 16:13:42] 2025-02-25 21:13:17,245 | INFO     | executing command: lscpu
[2025-02-25 16:13:42] 2025-02-25 21:13:17,270 | INFO     | found 12 cores (6 cores per socket, 2 sockets)
[2025-02-25 16:13:42] 2025-02-25 21:13:17,283 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-25 16:13:42] 2025-02-25 21:13:19,152 | INFO     | monitor loop #377: job 0:6530729323 is in state 'finished'
[2025-02-25 16:13:42] 2025-02-25 21:13:19,153 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 16:13:42] 2025-02-25 21:13:21,656 | INFO     | monitor loop #378: job 0:6530729323 is in state 'finished'
[2025-02-25 16:13:42] 2025-02-25 21:13:21,656 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 16:13:42] 2025-02-25 21:13:22,193 | INFO     | CPU arch script returned: x86-64-v2
[2025-02-25 16:13:42] 2025-02-25 21:13:22,193 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6530729323/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 16:13:42] 2025-02-25 21:13:22,194 | INFO     | extracted standard info from prmon json
[2025-02-25 16:13:42] 2025-02-25 21:13:22,195 | INFO     | extracted standard memory fields from prmon json
[2025-02-25 16:13:42] 2025-02-25 21:13:22,195 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-25 16:13:42] 2025-02-25 21:13:22,195 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 16:13:42] 2025-02-25 21:13:22,196 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 16:13:42] 2025-02-25 21:13:22,198 | INFO     | fitting pss+swap vs Time
[2025-02-25 16:13:42] 2025-02-25 21:13:22,198 | INFO     | model: linear, x: [1740513204.0, 1740513265.0, 1740513326.0, 1740513387.0, 1740513448.0, 1740513509.0, 1740513570.0, 1740513631.0, 1740513692.0, 1740513753.0, 1740
[2025-02-25 16:13:42] 2025-02-25 21:13:22,199 | INFO     | sum of square deviations: 141539398.0
[2025-02-25 16:13:42] 2025-02-25 21:13:22,199 | INFO     | sum of deviations: 20970428293.000008
[2025-02-25 16:13:42] 2025-02-25 21:13:22,199 | INFO     | mean x: 1740515522.0
[2025-02-25 16:13:42] 2025-02-25 21:13:22,199 | INFO     | mean y: 2590313.350649351
[2025-02-25 16:13:42] 2025-02-25 21:13:22,199 | INFO     | -- intersect: -257871587920.43326
[2025-02-25 16:13:42] 2025-02-25 21:13:22,199 | INFO     | intersect: -257871587920.43326
[2025-02-25 16:13:42] 2025-02-25 21:13:22,200 | INFO     | chi2: 2.158682075282912
[2025-02-25 16:13:42] 2025-02-25 21:13:22,200 | INFO     | -- intersect: -257871587920.43326
[2025-02-25 16:13:42] 2025-02-25 21:13:22,200 | INFO     | current memory leak: 148.16 B/s (using 77 data points, chi2=2.16)
[2025-02-25 16:13:42] 2025-02-25 21:13:22,200 | INFO     | ..............................
[2025-02-25 16:13:42] 2025-02-25 21:13:22,201 | INFO     | . Timing measurements:
[2025-02-25 16:13:42] 2025-02-25 21:13:22,201 | INFO     | . get job = 0 s
[2025-02-25 16:13:42] 2025-02-25 21:13:22,201 | INFO     | . initial setup = 2 s
[2025-02-25 16:13:42] 2025-02-25 21:13:22,201 | INFO     | . payload setup = 7 s
[2025-02-25 16:13:42] 2025-02-25 21:13:22,201 | INFO     | . stage-in = 0 s
[2025-02-25 16:13:42] 2025-02-25 21:13:22,201 | INFO     | . payload execution = 5096 s
[2025-02-25 16:13:42] 2025-02-25 21:13:22,201 | INFO     | . stage-out = 0 s
[2025-02-25 16:13:42] 2025-02-25 21:13:22,201 | INFO     | . log creation = 0 s
[2025-02-25 16:13:42] 2025-02-25 21:13:22,201 | INFO     | ..............................
[2025-02-25 16:13:42] 2025-02-25 21:13:22,286 | INFO     | 
[2025-02-25 16:13:42] 2025-02-25 21:13:22,286 | INFO     | job summary report
[2025-02-25 16:13:42] 2025-02-25 21:13:22,286 | INFO     | --------------------------------------------------
[2025-02-25 16:13:42] 2025-02-25 21:13:22,286 | INFO     | PanDA job id: 6530729323
[2025-02-25 16:13:42] 2025-02-25 21:13:22,287 | INFO     | task id: 43401163
[2025-02-25 16:13:42] 2025-02-25 21:13:22,287 | INFO     | errors: (none)
[2025-02-25 16:13:42] 2025-02-25 21:13:22,287 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 16:13:42] 2025-02-25 21:13:22,287 | INFO     | pilot state: finished 
[2025-02-25 16:13:42] 2025-02-25 21:13:22,287 | INFO     | transexitcode: 0
[2025-02-25 16:13:42] 2025-02-25 21:13:22,287 | INFO     | exeerrorcode: 0
[2025-02-25 16:13:42] 2025-02-25 21:13:22,288 | INFO     | exeerrordiag: 
[2025-02-25 16:13:42] 2025-02-25 21:13:22,288 | INFO     | exitcode: 0
[2025-02-25 16:13:42] 2025-02-25 21:13:22,288 | INFO     | exitmsg: OK
[2025-02-25 16:13:42] 2025-02-25 21:13:22,288 | INFO     | cpuconsumptiontime: 48116 s
[2025-02-25 16:13:42] 2025-02-25 21:13:22,288 | INFO     | nevents: 400
[2025-02-25 16:13:42] 2025-02-25 21:13:22,288 | INFO     | neventsw: 0
[2025-02-25 16:13:42] 2025-02-25 21:13:22,289 | INFO     | pid: 32594
[2025-02-25 16:13:42] 2025-02-25 21:13:22,289 | INFO     | pgrp: 32594
[2025-02-25 16:13:42] 2025-02-25 21:13:22,289 | INFO     | corecount: 12
[2025-02-25 16:13:42] 2025-02-25 21:13:22,289 | INFO     | event service: False
[2025-02-25 16:13:42] 2025-02-25 21:13:22,289 | INFO     | sizes: {0: 2370383, 5: 2370589, 11: 2370645, 5107: 2396784, 5108: 2405781, 5115: 2405895}
[2025-02-25 16:13:42] 2025-02-25 21:13:22,289 | INFO     | --------------------------------------------------
[2025-02-25 16:13:42] 2025-02-25 21:13:22,290 | INFO     | 
[2025-02-25 16:13:42] 2025-02-25 21:13:22,290 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-25 16:13:42] 2025-02-25 21:13:22,314 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 16:13:42] 2025-02-25 21:13:22,314 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 16:13:42] 2025-02-25 21:13:22,314 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 16:13:42] 2025-02-25 21:13:22,314 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 16:13:42] 2025-02-25 21:13:22,314 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 16:13:42] 2025-02-25 21:13:22,315 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 16:13:42] 2025-02-25 21:13:22,315 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 16:13:42] 2025-02-25 21:13:22,315 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 16:13:42] 2025-02-25 21:13:22,315 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 16:13:42] 2025-02-25 21:13:22,315 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 16:13:42] 2025-02-25 21:13:22,315 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 16:13:42] 2025-02-25 21:13:22,316 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 16:13:42] 2025-02-25 21:13:22,316 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 16:13:42] 2025-02-25 21:13:22,316 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 16:13:42] 2025-02-25 21:13:22,316 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 16:13:42] 2025-02-25 21:13:22,316 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 16:13:42] 2025-02-25 21:13:22,316 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 16:13:42] 2025-02-25 21:13:22,317 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 16:13:42] 2025-02-25 21:13:22,317 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 16:13:42] 2025-02-25 21:13:22,317 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 16:13:42] 2025-02-25 21:13:22,317 | INFO     | job 6530729323 has completed (purged errors)
[2025-02-25 16:13:42] 2025-02-25 21:13:22,317 | INFO     | overall cleanup function is called
[2025-02-25 16:13:42] 2025-02-25 21:13:23,325 | INFO     | --- collectZombieJob: --- 10, [32594]
[2025-02-25 16:13:42] 2025-02-25 21:13:23,326 | INFO     | zombie collector waiting for pid 32594
[2025-02-25 16:13:42] 2025-02-25 21:13:23,327 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 16:13:42] 2025-02-25 21:13:23,327 | INFO     | collected zombie processes
[2025-02-25 16:13:42] 2025-02-25 21:13:23,327 | INFO     | will attempt to kill all subprocesses of pid=32594
[2025-02-25 16:13:42] 2025-02-25 21:13:23,389 | INFO     | process IDs to be killed: [32594] (in reverse order)
[2025-02-25 16:13:42] 2025-02-25 21:13:23,437 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 16:13:42] 2025-02-25 21:13:23,437 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 16:13:42] 2025-02-25 21:13:23,441 | INFO     | did not find any defunct processes belonging to 32594
[2025-02-25 16:13:42] 2025-02-25 21:13:23,444 | INFO     | did not find any defunct processes belonging to 32594
[2025-02-25 16:13:42] 2025-02-25 21:13:23,445 | INFO     | ready for new job
[2025-02-25 16:13:42] 2025-02-25 21:13:23,445 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 16:13:42] 2025-02-25 21:13:23,447 | INFO     | **************************************
[2025-02-25 16:13:42] 2025-02-25 21:13:23,447 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 16:13:42] 2025-02-25 21:13:23,447 | INFO     | **************************************
[2025-02-25 16:13:42] 2025-02-25 21:13:23,447 | INFO     | 
[2025-02-25 16:13:42] 2025-02-25 21:13:23,448 | INFO     | architecture information:
[2025-02-25 16:13:42] 2025-02-25 21:13:23,448 | INFO     | executing command: cat /etc/os-release
[2025-02-25 16:13:42] 2025-02-25 21:13:23,464 | INFO     | cat /etc/os-release:
[2025-02-25 16:13:42] NAME="CentOS Linux"
[2025-02-25 16:13:42] VERSION="7 (Core)"
[2025-02-25 16:13:42] ID="centos"
[2025-02-25 16:13:42] ID_LIKE="rhel fedora"
[2025-02-25 16:13:42] VERSION_ID="7"
[2025-02-25 16:13:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 16:13:42] ANSI_COLOR="0;31"
[2025-02-25 16:13:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 16:13:42] HOME_URL="https://www.centos.org/"
[2025-02-25 16:13:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 16:13:42] 
[2025-02-25 16:13:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 16:13:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 16:13:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 16:13:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 16:13:42] 
[2025-02-25 16:13:42] 2025-02-25 21:13:23,464 | INFO     | **************************************
[2025-02-25 16:13:42] 2025-02-25 21:13:23,967 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-25 16:13:42] 2025-02-25 21:13:23,984 | INFO     | sufficient remaining disk space (29355933696 B)
[2025-02-25 16:13:42] 2025-02-25 21:13:23,984 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 16:13:42] 2025-02-25 21:13:23,984 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 16:13:42] 2025-02-25 21:13:23,985 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 16:13:42] 2025-02-25 21:13:24,017 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 16:13:42] 2025-02-25 21:13:24,017 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 16:13:42] 2025-02-25 21:13:24,018 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 16:13:42] 2025-02-25 21:13:24,107 | INFO     | all data control threads have been joined
[2025-02-25 16:13:42] 2025-02-25 21:13:24,159 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-02-25 16:13:42] 2025-02-25 21:13:24,160 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-02-25 16:13:42] 2025-02-25 21:13:24,160 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 16:13:42] 2025-02-25 21:13:24,160 | INFO     | will abort loop
[2025-02-25 16:13:42] 2025-02-25 21:13:24,198 | INFO     | all payload control threads have been joined
[2025-02-25 16:13:42] 2025-02-25 21:13:24,406 | INFO     | all job control threads have been joined
[2025-02-25 16:13:42] 2025-02-25 21:13:24,990 | INFO     | [job] retrieve thread has finished
[2025-02-25 16:13:42] 2025-02-25 21:13:24,990 | INFO     | [job] queue monitor thread has finished
[2025-02-25 16:13:42] 2025-02-25 21:13:25,004 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 16:13:42] 2025-02-25 21:13:25,113 | INFO     | [data] control thread has finished
[2025-02-25 16:13:42] 2025-02-25 21:13:25,164 | INFO     | [job] job monitor thread has finished
[2025-02-25 16:13:42] 2025-02-25 21:13:25,204 | INFO     | [payload] control thread has finished
[2025-02-25 16:13:42] 2025-02-25 21:13:25,337 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 16:13:42] 2025-02-25 21:13:25,411 | INFO     | [job] control thread has finished
[2025-02-25 16:13:42] 2025-02-25 21:13:25,415 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 16:13:42] 2025-02-25 21:13:25,462 | INFO     | [payload] failed_post thread has finished
[2025-02-25 16:13:42] 2025-02-25 21:13:25,510 | INFO     | [job] validate thread has finished
[2025-02-25 16:13:42] 2025-02-25 21:13:25,776 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 16:13:42] 2025-02-25 21:13:26,021 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 16:13:42] 2025-02-25 21:13:26,042 | INFO     | [payload] validate_post thread has finished
[2025-02-25 16:13:42] 2025-02-25 21:13:26,334 | INFO     | [data] copytool_in thread has finished
[2025-02-25 16:13:42] 2025-02-25 21:13:27,343 | INFO     | [data] copytool_out thread has finished
[2025-02-25 16:13:42] 2025-02-25 21:13:29,421 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 16:13:42] 2025-02-25 21:13:34,317 | INFO     | job.realtimelogging is not enabled
[2025-02-25 16:13:42] 2025-02-25 21:13:35,322 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 16:13:42] 2025-02-25 21:13:36,735 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140248417687360)>', '<ExcThread(monitor, started 140247316817664)>']
[2025-02-25 16:13:42] 2025-02-25 21:13:37,080 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 16:13:42] 2025-02-25 21:13:37,080 | INFO     | [monitor] control thread has ended
[2025-02-25 16:13:42] 2025-02-25 21:13:41,736 | INFO     | all workflow threads have been joined
[2025-02-25 16:13:42] 2025-02-25 21:13:41,737 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 16:13:42] 2025-02-25 21:13:41,737 | INFO     | traces error code: 0
[2025-02-25 16:13:42] 2025-02-25 21:13:41,738 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 16:13:42] 2025-02-25 21:13:41,837 [wrapper] ==== pilot stdout END ====
[2025-02-25 16:13:42] 2025-02-25 21:13:41,841 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 16:13:42] 2025-02-25 21:13:41,845 [wrapper] pilotpid: 26119
[2025-02-25 16:13:42] 2025-02-25 21:13:41,849 [wrapper] Pilot exit status: 0
[2025-02-25 16:13:42] 2025-02-25 21:13:41,864 [wrapper] pandaids: 6530729323
[2025-02-25 16:13:42] 2025-02-25 21:13:41,902 [wrapper] cleanup supervisor_pilot  8316 26120
[2025-02-25 16:13:42] 2025-02-25 21:13:41,906 [wrapper] Test setup, not cleaning
[2025-02-25 16:13:42] 2025-02-25 21:13:41,914 [wrapper] apfmon messages muted
[2025-02-25 16:13:42] 2025-02-25 21:13:41,918 [wrapper] ==== wrapper stdout END ====
[2025-02-25 16:13:42] 2025-02-25 21:13:41,922 [wrapper] ==== wrapper stderr END ====
[2025-02-25 16:13:42]  *** Error codes and diagnostics ***
[2025-02-25 16:13:42]     "exeErrorCode": 0,
[2025-02-25 16:13:42]     "exeErrorDiag": "",
[2025-02-25 16:13:42]     "pilotErrorCode": 0,
[2025-02-25 16:13:42]     "pilotErrorDiag": "",
[2025-02-25 16:13:42]  *** Listing of results directory ***
[2025-02-25 16:13:42] total 433764
[2025-02-25 16:13:42] -rw-r--r-- 1 boincer umatlas    491065 Feb 25 13:15 pilot3.tar.gz
[2025-02-25 16:13:42] -rw-r--r-- 1 boincer umatlas      5118 Feb 25 13:31 queuedata.json
[2025-02-25 16:13:42] -rwx------ 1 boincer umatlas     35865 Feb 25 13:31 runpilot2-wrapper.sh
[2025-02-25 16:13:42] -rw-r--r-- 1 boincer umatlas       100 Feb 25 14:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 16:13:42] -rwxr-xr-x 1 boincer umatlas      7986 Feb 25 14:47 run_atlas
[2025-02-25 16:13:42] -rw-r--r-- 1 boincer umatlas       105 Feb 25 14:47 job.xml
[2025-02-25 16:13:42] -rw-r--r-- 2 boincer umatlas 251167042 Feb 25 14:47 EVNT.43401161._000058.pool.root.1
[2025-02-25 16:13:42] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 14:47 start_atlas.sh
[2025-02-25 16:13:42] drwxrwx--x 2 boincer umatlas      4096 Feb 25 14:47 shared
[2025-02-25 16:13:42] -rw-r--r-- 2 boincer umatlas    503551 Feb 25 14:47 input.tar.gz
[2025-02-25 16:13:42] -rw-r--r-- 1 boincer umatlas         0 Feb 25 14:47 boinc_lockfile
[2025-02-25 16:13:42] -rw-r--r-- 1 boincer umatlas      2541 Feb 25 14:47 pandaJob.out
[2025-02-25 16:13:42] -rw------- 1 boincer umatlas       424 Feb 25 14:47 setup.sh.local
[2025-02-25 16:13:42] -rw------- 1 boincer umatlas    987482 Feb 25 14:47 agis_schedconf.cvmfs.json
[2025-02-25 16:13:42] -rw------- 1 boincer umatlas   1573632 Feb 25 14:47 agis_ddmendpoints.agis.ALL.json
[2025-02-25 16:13:42] drwx------ 4 boincer umatlas      4096 Feb 25 14:47 pilot3
[2025-02-25 16:13:42] -rw-r--r-- 1 boincer umatlas      5868 Feb 25 16:11 init_data.xml
[2025-02-25 16:13:42] -rw-r--r-- 1 boincer umatlas       529 Feb 25 16:12 boinc_task_state.xml
[2025-02-25 16:13:42] -rw------- 1 boincer umatlas 187487892 Feb 25 16:12 HITS.43401163._001460.pool.root.1
[2025-02-25 16:13:42] -rw------- 1 boincer umatlas        95 Feb 25 16:12 pilot_heartbeat.json
[2025-02-25 16:13:42] -rw------- 1 boincer umatlas      1046 Feb 25 16:13 memory_monitor_summary.json
[2025-02-25 16:13:42] -rw------- 1 boincer umatlas    380516 Feb 25 16:13 log.43401163._001460.job.log.tgz.1
[2025-02-25 16:13:42] -rw------- 1 boincer umatlas      7764 Feb 25 16:13 heartbeat.json
[2025-02-25 16:13:42] -rw-r--r-- 1 boincer umatlas      8192 Feb 25 16:13 boinc_mmap_file
[2025-02-25 16:13:42] -rw-r--r-- 1 boincer umatlas        27 Feb 25 16:13 wrapper_checkpoint.txt
[2025-02-25 16:13:42] -rw------- 1 boincer umatlas      4473 Feb 25 16:13 pilotlog.txt
[2025-02-25 16:13:42] -rw------- 1 boincer umatlas    479660 Feb 25 16:13 log.43401163._001460.job.log.1
[2025-02-25 16:13:42] -rw------- 1 boincer umatlas       357 Feb 25 16:13 output.list
[2025-02-25 16:13:42] -rw-r--r-- 1 boincer umatlas       620 Feb 25 16:13 runtime_log
[2025-02-25 16:13:42] -rw------- 1 boincer umatlas    880640 Feb 25 16:13 result.tar.gz
[2025-02-25 16:13:42] -rw------- 1 boincer umatlas       658 Feb 25 16:13 6HsKDm6sE76nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmjywKDmD7Myam.diag
[2025-02-25 16:13:42] -rw-r--r-- 1 boincer umatlas     11015 Feb 25 16:13 runtime_log.err
[2025-02-25 16:13:42] -rw-r--r-- 1 boincer umatlas     21663 Feb 25 16:13 stderr.txt
[2025-02-25 16:13:42] HITS file was successfully produced:
[2025-02-25 16:13:42] -rw------- 1 boincer umatlas 187487892 Feb 25 16:12 shared/HITS.pool.root.1
[2025-02-25 16:13:42]  *** Contents of shared directory: ***
[2025-02-25 16:13:42] total 429756
[2025-02-25 16:13:42] -rw-r--r-- 2 boincer umatlas 251167042 Feb 25 14:47 ATLAS.root_0
[2025-02-25 16:13:42] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 14:47 start_atlas.sh
[2025-02-25 16:13:42] -rw-r--r-- 2 boincer umatlas    503551 Feb 25 14:47 input.tar.gz
[2025-02-25 16:13:42] -rw------- 1 boincer umatlas 187487892 Feb 25 16:12 HITS.pool.root.1
[2025-02-25 16:13:42] -rw------- 1 boincer umatlas    880640 Feb 25 16:13 result.tar.gz
16:13:43 (22496): run_atlas exited; CPU time 48053.603629
16:13:43 (22496): called boinc_finish(0)

</stderr_txt>
]]>

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