Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:45:30 (30913): wrapper (7.7.26015): starting
14:45:30 (30913): wrapper: running run_atlas (--nthreads 8)
[2025-02-25 14:45:30] Arguments: --nthreads 8
[2025-02-25 14:45:30] Threads: 8
[2025-02-25 14:45:30] Checking for CVMFS
[2025-02-25 14:45:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 14:45:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 14:45:30] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 14:45:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 14:45:30] 2.11.2.0 3761 175305 223232 143050 2 58 17648480 20275201 916 130560 0 48124470 99.995 7049707 40108 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-25 14:45:30] CVMFS is ok
[2025-02-25 14:45:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 14:45:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 14:45:30] Further information can be found at the LHC@home message board.
[2025-02-25 14:45:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 14:45:30] Checking for apptainer binary...
[2025-02-25 14:45:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 14:45:30] Running /usr/bin/apptainer --version
[2025-02-25 14:45:30] apptainer version 1.3.2-1.el7
[2025-02-25 14:45:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 14:45:31] c-205-36.aglt2.org
[2025-02-25 14:45:31] apptainer works
[2025-02-25 14:45:31] Set ATHENA_PROC_NUMBER=8
[2025-02-25 14:45:31] Set ATHENA_CORE_NUMBER=8
[2025-02-25 14:45:31] Starting ATLAS job with PandaID=6530793288
[2025-02-25 14:45:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 16:05:32]  *** The last 200 lines of the pilot log: ***
[2025-02-25 16:05:32]  is_altstaged=None
[2025-02-25 16:05:32]  is_tar=False
[2025-02-25 16:05:32]  lfn=log.43401137._002127.job.log.tgz.1
[2025-02-25 16:05:32]  mtime=0
[2025-02-25 16:05:32]  protocol_id=None
[2025-02-25 16:05:32]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-25 16:05:32]  replicas=None
[2025-02-25 16:05:32]  scope=mc23_13p6TeV
[2025-02-25 16:05:32]  status=None
[2025-02-25 16:05:32]  status_code=0
[2025-02-25 16:05:32]  storage_token=
[2025-02-25 16:05:32]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6530793288/log.43401137._002127.job.log.tgz.1
[2025-02-25 16:05:32]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/62/e0/log.43401137._002127.job.log.tgz.1
[2025-02-25 16:05:32]  workdir=None
[2025-02-25 16:05:32] ]
[2025-02-25 16:05:32] 2025-02-25 21:05:10,926 | INFO     | transferring file log.43401137._002127.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6530793288/log.43401137._002127.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-02-25 16:05:32] 2025-02-25 21:05:10,926 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6530793288/log.43401137._002127.job.log.tgz.1 /tmp/boinchome/slots/0/log.43401137._002127.job
[2025-02-25 16:05:32] 2025-02-25 21:05:10,945 | INFO     | adding to output.list: log.43401137._002127.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/62/e0/log.43401137._002127.job.log.tg
[2025-02-25 16:05:32] 2025-02-25 21:05:10,946 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-25 16:05:32] 2025-02-25 21:05:10,946 | INFO     | summary of transferred files:
[2025-02-25 16:05:32] 2025-02-25 21:05:10,946 | INFO     |  -- lfn=log.43401137._002127.job.log.tgz.1, status_code=0, status=transferred
[2025-02-25 16:05:32] 2025-02-25 21:05:10,946 | INFO     | stage-out finished correctly
[2025-02-25 16:05:32] 2025-02-25 21:05:11,470 | INFO     | monitor loop #348: job 0:6530793288 is in state 'finished'
[2025-02-25 16:05:32] 2025-02-25 21:05:11,470 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 16:05:32] 2025-02-25 21:05:12,838 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-25 16:05:32] 2025-02-25 21:05:13,973 | INFO     | monitor loop #349: job 0:6530793288 is in state 'finished'
[2025-02-25 16:05:32] 2025-02-25 21:05:13,974 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 16:05:32] 2025-02-25 21:05:15,456 | INFO     | job 6530793288 has state=finished
[2025-02-25 16:05:32] 2025-02-25 21:05:15,457 | INFO     | preparing for final server update for job 6530793288 in state='finished'
[2025-02-25 16:05:32] 2025-02-25 21:05:15,457 | INFO     | this job has now completed (state=finished)
[2025-02-25 16:05:32] 2025-02-25 21:05:15,458 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-25 16:05:32] 2025-02-25 21:05:15,458 | INFO     | log transfer has been attempted: DONE
[2025-02-25 16:05:32] 2025-02-25 21:05:15,458 | INFO     | job 6530793288 has finished - writing final server update
[2025-02-25 16:05:32] 2025-02-25 21:05:15,459 | INFO     | total number of processed events: 400 (read)
[2025-02-25 16:05:32] 2025-02-25 21:05:15,461 | INFO     | executing command: lscpu
[2025-02-25 16:05:32] 2025-02-25 21:05:15,491 | INFO     | found 16 cores (8 cores per socket, 2 sockets)
[2025-02-25 16:05:32] 2025-02-25 21:05:15,506 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-25 16:05:32] 2025-02-25 21:05:16,476 | INFO     | monitor loop #350: job 0:6530793288 is in state 'finished'
[2025-02-25 16:05:32] 2025-02-25 21:05:16,477 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 16:05:32] 2025-02-25 21:05:18,979 | INFO     | monitor loop #351: job 0:6530793288 is in state 'finished'
[2025-02-25 16:05:32] 2025-02-25 21:05:18,979 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 16:05:32] 2025-02-25 21:05:20,167 | INFO     | CPU arch script returned: x86-64-v3
[2025-02-25 16:05:32] 2025-02-25 21:05:20,167 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6530793288/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 16:05:32] 2025-02-25 21:05:20,169 | INFO     | extracted standard info from prmon json
[2025-02-25 16:05:32] 2025-02-25 21:05:20,169 | INFO     | extracted standard memory fields from prmon json
[2025-02-25 16:05:32] 2025-02-25 21:05:20,169 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-25 16:05:32] 2025-02-25 21:05:20,169 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 16:05:32] 2025-02-25 21:05:20,169 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 16:05:32] 2025-02-25 21:05:20,172 | INFO     | fitting pss+swap vs Time
[2025-02-25 16:05:32] 2025-02-25 21:05:20,172 | INFO     | model: linear, x: [1740513072.0, 1740513133.0, 1740513194.0, 1740513255.0, 1740513316.0, 1740513377.0, 1740513438.0, 1740513499.0, 1740513560.0, 1740513621.0, 1740
[2025-02-25 16:05:32] 2025-02-25 21:05:20,172 | INFO     | sum of square deviations: 110960220.0
[2025-02-25 16:05:32] 2025-02-25 21:05:20,173 | INFO     | sum of deviations: 16150280089.999998
[2025-02-25 16:05:32] 2025-02-25 21:05:20,173 | INFO     | mean x: 1740515207.0
[2025-02-25 16:05:32] 2025-02-25 21:05:20,173 | INFO     | mean y: 2434364.9859154928
[2025-02-25 16:05:32] 2025-02-25 21:05:20,174 | INFO     | -- intersect: -253329868814.96747
[2025-02-25 16:05:32] 2025-02-25 21:05:20,174 | INFO     | intersect: -253329868814.96747
[2025-02-25 16:05:32] 2025-02-25 21:05:20,174 | INFO     | chi2: 1.8429557614963035
[2025-02-25 16:05:32] 2025-02-25 21:05:20,174 | INFO     | -- intersect: -253329868814.96747
[2025-02-25 16:05:32] 2025-02-25 21:05:20,174 | INFO     | current memory leak: 145.55 B/s (using 71 data points, chi2=1.84)
[2025-02-25 16:05:32] 2025-02-25 21:05:20,175 | INFO     | ..............................
[2025-02-25 16:05:32] 2025-02-25 21:05:20,175 | INFO     | . Timing measurements:
[2025-02-25 16:05:32] 2025-02-25 21:05:20,175 | INFO     | . get job = 0 s
[2025-02-25 16:05:32] 2025-02-25 21:05:20,175 | INFO     | . initial setup = 2 s
[2025-02-25 16:05:32] 2025-02-25 21:05:20,175 | INFO     | . payload setup = 6 s
[2025-02-25 16:05:32] 2025-02-25 21:05:20,176 | INFO     | . stage-in = 0 s
[2025-02-25 16:05:32] 2025-02-25 21:05:20,176 | INFO     | . payload execution = 4742 s
[2025-02-25 16:05:32] 2025-02-25 21:05:20,176 | INFO     | . stage-out = 0 s
[2025-02-25 16:05:32] 2025-02-25 21:05:20,176 | INFO     | . log creation = 0 s
[2025-02-25 16:05:32] 2025-02-25 21:05:20,176 | INFO     | ..............................
[2025-02-25 16:05:32] 2025-02-25 21:05:20,258 | INFO     | 
[2025-02-25 16:05:32] 2025-02-25 21:05:20,258 | INFO     | job summary report
[2025-02-25 16:05:32] 2025-02-25 21:05:20,259 | INFO     | --------------------------------------------------
[2025-02-25 16:05:32] 2025-02-25 21:05:20,259 | INFO     | PanDA job id: 6530793288
[2025-02-25 16:05:32] 2025-02-25 21:05:20,259 | INFO     | task id: 43401137
[2025-02-25 16:05:32] 2025-02-25 21:05:20,259 | INFO     | errors: (none)
[2025-02-25 16:05:32] 2025-02-25 21:05:20,259 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 16:05:32] 2025-02-25 21:05:20,259 | INFO     | pilot state: finished 
[2025-02-25 16:05:32] 2025-02-25 21:05:20,259 | INFO     | transexitcode: 0
[2025-02-25 16:05:32] 2025-02-25 21:05:20,259 | INFO     | exeerrorcode: 0
[2025-02-25 16:05:32] 2025-02-25 21:05:20,260 | INFO     | exeerrordiag: 
[2025-02-25 16:05:32] 2025-02-25 21:05:20,260 | INFO     | exitcode: 0
[2025-02-25 16:05:32] 2025-02-25 21:05:20,260 | INFO     | exitmsg: OK
[2025-02-25 16:05:32] 2025-02-25 21:05:20,260 | INFO     | cpuconsumptiontime: 31380 s
[2025-02-25 16:05:32] 2025-02-25 21:05:20,260 | INFO     | nevents: 400
[2025-02-25 16:05:32] 2025-02-25 21:05:20,260 | INFO     | neventsw: 0
[2025-02-25 16:05:32] 2025-02-25 21:05:20,260 | INFO     | pid: 8682
[2025-02-25 16:05:32] 2025-02-25 21:05:20,260 | INFO     | pgrp: 8682
[2025-02-25 16:05:32] 2025-02-25 21:05:20,260 | INFO     | corecount: 8
[2025-02-25 16:05:32] 2025-02-25 21:05:20,261 | INFO     | event service: False
[2025-02-25 16:05:32] 2025-02-25 21:05:20,261 | INFO     | sizes: {0: 2370229, 1: 2370428, 5: 2370634, 11: 2370690, 4752: 2396822, 4753: 2405763, 4755: 2405947, 4762: 2406117}
[2025-02-25 16:05:32] 2025-02-25 21:05:20,261 | INFO     | --------------------------------------------------
[2025-02-25 16:05:32] 2025-02-25 21:05:20,261 | INFO     | 
[2025-02-25 16:05:32] 2025-02-25 21:05:20,261 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-25 16:05:32] 2025-02-25 21:05:20,282 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 16:05:32] 2025-02-25 21:05:20,282 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 16:05:32] 2025-02-25 21:05:20,282 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 16:05:32] 2025-02-25 21:05:20,282 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 16:05:32] 2025-02-25 21:05:20,282 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 16:05:32] 2025-02-25 21:05:20,283 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 16:05:32] 2025-02-25 21:05:20,283 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 16:05:32] 2025-02-25 21:05:20,283 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 16:05:32] 2025-02-25 21:05:20,283 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 16:05:32] 2025-02-25 21:05:20,283 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 16:05:32] 2025-02-25 21:05:20,283 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 16:05:32] 2025-02-25 21:05:20,283 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 16:05:32] 2025-02-25 21:05:20,283 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 16:05:32] 2025-02-25 21:05:20,284 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 16:05:32] 2025-02-25 21:05:20,284 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 16:05:32] 2025-02-25 21:05:20,284 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 16:05:32] 2025-02-25 21:05:20,284 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 16:05:32] 2025-02-25 21:05:20,284 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 16:05:32] 2025-02-25 21:05:20,284 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 16:05:32] 2025-02-25 21:05:20,284 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 16:05:32] 2025-02-25 21:05:20,284 | INFO     | job 6530793288 has completed (purged errors)
[2025-02-25 16:05:32] 2025-02-25 21:05:20,285 | INFO     | overall cleanup function is called
[2025-02-25 16:05:32] 2025-02-25 21:05:21,288 | INFO     | --- collectZombieJob: --- 10, [8682]
[2025-02-25 16:05:32] 2025-02-25 21:05:21,288 | INFO     | zombie collector waiting for pid 8682
[2025-02-25 16:05:32] 2025-02-25 21:05:21,289 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 16:05:32] 2025-02-25 21:05:21,289 | INFO     | collected zombie processes
[2025-02-25 16:05:32] 2025-02-25 21:05:21,289 | INFO     | will attempt to kill all subprocesses of pid=8682
[2025-02-25 16:05:32] 2025-02-25 21:05:21,359 | INFO     | process IDs to be killed: [8682] (in reverse order)
[2025-02-25 16:05:32] 2025-02-25 21:05:21,413 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 16:05:32] 2025-02-25 21:05:21,413 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 16:05:32] 2025-02-25 21:05:21,417 | INFO     | did not find any defunct processes belonging to 8682
[2025-02-25 16:05:32] 2025-02-25 21:05:21,421 | INFO     | did not find any defunct processes belonging to 8682
[2025-02-25 16:05:32] 2025-02-25 21:05:21,421 | INFO     | ready for new job
[2025-02-25 16:05:32] 2025-02-25 21:05:21,421 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 16:05:32] 2025-02-25 21:05:21,423 | INFO     | **************************************
[2025-02-25 16:05:32] 2025-02-25 21:05:21,423 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 16:05:32] 2025-02-25 21:05:21,423 | INFO     | **************************************
[2025-02-25 16:05:32] 2025-02-25 21:05:21,423 | INFO     | 
[2025-02-25 16:05:32] 2025-02-25 21:05:21,425 | INFO     | architecture information:
[2025-02-25 16:05:32] 2025-02-25 21:05:21,425 | INFO     | executing command: cat /etc/os-release
[2025-02-25 16:05:32] 2025-02-25 21:05:21,438 | INFO     | cat /etc/os-release:
[2025-02-25 16:05:32] NAME="CentOS Linux"
[2025-02-25 16:05:32] VERSION="7 (Core)"
[2025-02-25 16:05:32] ID="centos"
[2025-02-25 16:05:32] ID_LIKE="rhel fedora"
[2025-02-25 16:05:32] VERSION_ID="7"
[2025-02-25 16:05:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 16:05:32] ANSI_COLOR="0;31"
[2025-02-25 16:05:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 16:05:32] HOME_URL="https://www.centos.org/"
[2025-02-25 16:05:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 16:05:32] 
[2025-02-25 16:05:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 16:05:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 16:05:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 16:05:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 16:05:32] 
[2025-02-25 16:05:32] 2025-02-25 21:05:21,438 | INFO     | **************************************
[2025-02-25 16:05:32] 2025-02-25 21:05:21,940 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-25 16:05:32] 2025-02-25 21:05:21,956 | INFO     | sufficient remaining disk space (32830914560 B)
[2025-02-25 16:05:32] 2025-02-25 21:05:21,956 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 16:05:32] 2025-02-25 21:05:21,957 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 16:05:32] 2025-02-25 21:05:21,957 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 16:05:32] 2025-02-25 21:05:21,957 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-25 16:05:32] 2025-02-25 21:05:21,957 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 16:05:32] 2025-02-25 21:05:21,958 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 16:05:32] 2025-02-25 21:05:21,958 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 16:05:32] 2025-02-25 21:05:21,959 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 16:05:32] 2025-02-25 21:05:22,034 | INFO     | all job control threads have been joined
[2025-02-25 16:05:32] 2025-02-25 21:05:22,413 | INFO     | all payload control threads have been joined
[2025-02-25 16:05:32] 2025-02-25 21:05:22,488 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 16:05:32] 2025-02-25 21:05:22,488 | INFO     | aborting loop
[2025-02-25 16:05:32] 2025-02-25 21:05:22,887 | INFO     | all data control threads have been joined
[2025-02-25 16:05:32] 2025-02-25 21:05:22,960 | INFO     | [job] retrieve thread has finished
[2025-02-25 16:05:32] 2025-02-25 21:05:22,963 | INFO     | [job] queue monitor thread has finished
[2025-02-25 16:05:32] 2025-02-25 21:05:22,964 | INFO     | [payload] failed_post thread has finished
[2025-02-25 16:05:32] 2025-02-25 21:05:23,040 | INFO     | [job] control thread has finished
[2025-02-25 16:05:32] 2025-02-25 21:05:23,076 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 16:05:32] 2025-02-25 21:05:23,098 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 16:05:32] 2025-02-25 21:05:23,235 | INFO     | [job] validate thread has finished
[2025-02-25 16:05:32] 2025-02-25 21:05:23,419 | INFO     | [payload] control thread has finished
[2025-02-25 16:05:32] 2025-02-25 21:05:23,427 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 16:05:32] 2025-02-25 21:05:23,493 | INFO     | [job] job monitor thread has finished
[2025-02-25 16:05:32] 2025-02-25 21:05:23,674 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 16:05:32] 2025-02-25 21:05:23,675 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 16:05:32] 2025-02-25 21:05:23,681 | INFO     | [data] copytool_in thread has finished
[2025-02-25 16:05:32] 2025-02-25 21:05:23,892 | INFO     | [data] control thread has finished
[2025-02-25 16:05:32] 2025-02-25 21:05:23,963 | INFO     | [payload] validate_post thread has finished
[2025-02-25 16:05:32] 2025-02-25 21:05:23,964 | INFO     | [data] copytool_out thread has finished
[2025-02-25 16:05:32] 2025-02-25 21:05:27,433 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 16:05:32] 2025-02-25 21:05:27,506 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140657943226176)>', '<ExcThread(monitor, started 140657645557504)>']
[2025-02-25 16:05:32] 2025-02-25 21:05:27,988 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 16:05:32] 2025-02-25 21:05:27,989 | INFO     | [monitor] control thread has ended
[2025-02-25 16:05:32] 2025-02-25 21:05:32,532 | INFO     | all workflow threads have been joined
[2025-02-25 16:05:32] 2025-02-25 21:05:32,532 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 16:05:32] 2025-02-25 21:05:32,532 | INFO     | traces error code: 0
[2025-02-25 16:05:32] 2025-02-25 21:05:32,533 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 16:05:32] 2025-02-25 21:05:32,628 [wrapper] ==== pilot stdout END ====
[2025-02-25 16:05:32] 2025-02-25 21:05:32,632 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 16:05:32] 2025-02-25 21:05:32,636 [wrapper] pilotpid: 2088
[2025-02-25 16:05:32] 2025-02-25 21:05:32,639 [wrapper] Pilot exit status: 0
[2025-02-25 16:05:32] 2025-02-25 21:05:32,652 [wrapper] pandaids: 6530793288
[2025-02-25 16:05:32] 2025-02-25 21:05:32,694 [wrapper] cleanup supervisor_pilot 26122 2089
[2025-02-25 16:05:32] 2025-02-25 21:05:32,698 [wrapper] Test setup, not cleaning
[2025-02-25 16:05:32] 2025-02-25 21:05:32,705 [wrapper] apfmon messages muted
[2025-02-25 16:05:32] 2025-02-25 21:05:32,708 [wrapper] ==== wrapper stdout END ====
[2025-02-25 16:05:32] 2025-02-25 21:05:32,712 [wrapper] ==== wrapper stderr END ====
[2025-02-25 16:05:32]  *** Error codes and diagnostics ***
[2025-02-25 16:05:32]     "exeErrorCode": 0,
[2025-02-25 16:05:32]     "exeErrorDiag": "",
[2025-02-25 16:05:32]     "pilotErrorCode": 0,
[2025-02-25 16:05:32]     "pilotErrorDiag": "",
[2025-02-25 16:05:32]  *** Listing of results directory ***
[2025-02-25 16:05:32] total 435464
[2025-02-25 16:05:32] -rw-r--r-- 1 boincer umatlas    491065 Feb 25 14:07 pilot3.tar.gz
[2025-02-25 16:05:32] -rwx------ 1 boincer umatlas     35865 Feb 25 14:21 runpilot2-wrapper.sh
[2025-02-25 16:05:32] -rw-r--r-- 1 boincer umatlas      5118 Feb 25 14:21 queuedata.json
[2025-02-25 16:05:32] -rw-r--r-- 1 boincer umatlas       100 Feb 25 14:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 16:05:32] -rwxr-xr-x 1 boincer umatlas      7986 Feb 25 14:45 run_atlas
[2025-02-25 16:05:32] -rw-r--r-- 1 boincer umatlas       105 Feb 25 14:45 job.xml
[2025-02-25 16:05:32] -rw-r--r-- 2 boincer umatlas 251397050 Feb 25 14:45 EVNT.43401135._000089.pool.root.1
[2025-02-25 16:05:32] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 14:45 start_atlas.sh
[2025-02-25 16:05:32] drwxrwx--x 2 boincer umatlas      4096 Feb 25 14:45 shared
[2025-02-25 16:05:32] -rw-r--r-- 2 boincer umatlas    503553 Feb 25 14:45 input.tar.gz
[2025-02-25 16:05:32] -rw-r--r-- 1 boincer umatlas         0 Feb 25 14:45 boinc_lockfile
[2025-02-25 16:05:32] -rw-r--r-- 1 boincer umatlas      2558 Feb 25 14:45 pandaJob.out
[2025-02-25 16:05:32] -rw------- 1 boincer umatlas       424 Feb 25 14:45 setup.sh.local
[2025-02-25 16:05:32] -rw------- 1 boincer umatlas    987482 Feb 25 14:45 agis_schedconf.cvmfs.json
[2025-02-25 16:05:32] -rw------- 1 boincer umatlas   1573632 Feb 25 14:45 agis_ddmendpoints.agis.ALL.json
[2025-02-25 16:05:32] drwx------ 4 boincer umatlas      4096 Feb 25 14:45 pilot3
[2025-02-25 16:05:32] -rw------- 1 boincer umatlas        95 Feb 25 16:04 pilot_heartbeat.json
[2025-02-25 16:05:32] -rw-r--r-- 1 boincer umatlas      6049 Feb 25 16:04 init_data.xml
[2025-02-25 16:05:32] -rw------- 1 boincer umatlas 189199682 Feb 25 16:04 HITS.43401137._002127.pool.root.1
[2025-02-25 16:05:32] -rw-r--r-- 1 boincer umatlas       529 Feb 25 16:04 boinc_task_state.xml
[2025-02-25 16:05:32] -rw------- 1 boincer umatlas      1045 Feb 25 16:05 memory_monitor_summary.json
[2025-02-25 16:05:32] -rw------- 1 boincer umatlas    300341 Feb 25 16:05 log.43401137._002127.job.log.tgz.1
[2025-02-25 16:05:32] -rw------- 1 boincer umatlas      7752 Feb 25 16:05 heartbeat.json
[2025-02-25 16:05:32] -rw-r--r-- 1 boincer umatlas      8192 Feb 25 16:05 boinc_mmap_file
[2025-02-25 16:05:32] -rw-r--r-- 1 boincer umatlas        27 Feb 25 16:05 wrapper_checkpoint.txt
[2025-02-25 16:05:32] -rw------- 1 boincer umatlas      4338 Feb 25 16:05 pilotlog.txt
[2025-02-25 16:05:32] -rw------- 1 boincer umatlas    462673 Feb 25 16:05 log.43401137._002127.job.log.1
[2025-02-25 16:05:32] -rw------- 1 boincer umatlas       357 Feb 25 16:05 output.list
[2025-02-25 16:05:32] -rw-r--r-- 1 boincer umatlas       620 Feb 25 16:05 runtime_log
[2025-02-25 16:05:32] -rw------- 1 boincer umatlas    778240 Feb 25 16:05 result.tar.gz
[2025-02-25 16:05:32] -rw-r--r-- 1 boincer umatlas     11013 Feb 25 16:05 runtime_log.err
[2025-02-25 16:05:32] -rw------- 1 boincer umatlas       658 Feb 25 16:05 bRlLDmffF76nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmP4wKDmDdLRvn.diag
[2025-02-25 16:05:32] -rw-r--r-- 1 boincer umatlas     21573 Feb 25 16:05 stderr.txt
[2025-02-25 16:05:32] HITS file was successfully produced:
[2025-02-25 16:05:32] -rw------- 1 boincer umatlas 189199682 Feb 25 16:04 shared/HITS.pool.root.1
[2025-02-25 16:05:32]  *** Contents of shared directory: ***
[2025-02-25 16:05:32] total 431552
[2025-02-25 16:05:32] -rw-r--r-- 2 boincer umatlas 251397050 Feb 25 14:45 ATLAS.root_0
[2025-02-25 16:05:32] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 14:45 start_atlas.sh
[2025-02-25 16:05:32] -rw-r--r-- 2 boincer umatlas    503553 Feb 25 14:45 input.tar.gz
[2025-02-25 16:05:32] -rw------- 1 boincer umatlas 189199682 Feb 25 16:04 HITS.pool.root.1
[2025-02-25 16:05:32] -rw------- 1 boincer umatlas    778240 Feb 25 16:05 result.tar.gz
16:05:34 (30913): run_atlas exited; CPU time 31355.360772
16:05:34 (30913): called boinc_finish(0)

</stderr_txt>
]]>

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