Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:32:56 (19851): wrapper (7.7.26015): starting
13:32:56 (19851): wrapper: running run_atlas (--nthreads 8)
[2025-02-25 13:32:56] Arguments: --nthreads 8
[2025-02-25 13:32:56] Threads: 8
[2025-02-25 13:32:56] Checking for CVMFS
[2025-02-25 13:32:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 13:32:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 13:32:56] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 13:32:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 13:32:56] 2.11.2.0 3761 175233 221896 143048 3 186 17634467 20275201 668 130560 0 47992601 99.995 7047358 40107 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-25 13:32:56] CVMFS is ok
[2025-02-25 13:32:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 13:32:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 13:32:56] Further information can be found at the LHC@home message board.
[2025-02-25 13:32:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 13:32:56] Checking for apptainer binary...
[2025-02-25 13:32:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 13:32:56] Running /usr/bin/apptainer --version
[2025-02-25 13:32:56] apptainer version 1.3.2-1.el7
[2025-02-25 13:32:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 13:32:57] c-205-36.aglt2.org
[2025-02-25 13:32:57] apptainer works
[2025-02-25 13:32:57] Set ATHENA_PROC_NUMBER=8
[2025-02-25 13:32:57] Set ATHENA_CORE_NUMBER=8
[2025-02-25 13:32:57] Starting ATLAS job with PandaID=6530729238
[2025-02-25 13:32:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 14:50:15]  *** The last 200 lines of the pilot log: ***
[2025-02-25 14:50:15]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-02-25 14:50:15]  is_altstaged=None
[2025-02-25 14:50:15]  is_tar=False
[2025-02-25 14:50:15]  lfn=log.43401163._001375.job.log.tgz.1
[2025-02-25 14:50:15]  mtime=0
[2025-02-25 14:50:15]  protocol_id=None
[2025-02-25 14:50:15]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-25 14:50:15]  replicas=None
[2025-02-25 14:50:15]  scope=mc23_13p6TeV
[2025-02-25 14:50:15]  status=None
[2025-02-25 14:50:15]  status_code=0
[2025-02-25 14:50:15]  storage_token=
[2025-02-25 14:50:15]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6530729238/log.43401163._001375.job.log.tgz.1
[2025-02-25 14:50:15]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/df/c4/log.43401163._001375.job.log.tgz.1
[2025-02-25 14:50:15]  workdir=None
[2025-02-25 14:50:15] ]
[2025-02-25 14:50:15] 2025-02-25 19:49:55,044 | INFO     | transferring file log.43401163._001375.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6530729238/log.43401163._001375.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-02-25 14:50:15] 2025-02-25 19:49:55,044 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6530729238/log.43401163._001375.job.log.tgz.1 /tmp/boinchome/slots/1/log.43401163._001375.job
[2025-02-25 14:50:15] 2025-02-25 19:49:55,060 | INFO     | adding to output.list: log.43401163._001375.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/df/c4/log.43401163._001375.job.log.tg
[2025-02-25 14:50:15] 2025-02-25 19:49:55,061 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-25 14:50:15] 2025-02-25 19:49:55,062 | INFO     | summary of transferred files:
[2025-02-25 14:50:15] 2025-02-25 19:49:55,062 | INFO     |  -- lfn=log.43401163._001375.job.log.tgz.1, status_code=0, status=transferred
[2025-02-25 14:50:15] 2025-02-25 19:49:55,062 | INFO     | stage-out finished correctly
[2025-02-25 14:50:15] 2025-02-25 19:49:55,898 | INFO     | monitor loop #337: job 0:6530729238 is in state 'finished'
[2025-02-25 14:50:15] 2025-02-25 19:49:55,899 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 14:50:15] 2025-02-25 19:49:57,216 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-25 14:50:15] 2025-02-25 19:49:57,650 | INFO     | job 6530729238 has state=finished
[2025-02-25 14:50:15] 2025-02-25 19:49:57,650 | INFO     | preparing for final server update for job 6530729238 in state='finished'
[2025-02-25 14:50:15] 2025-02-25 19:49:57,651 | INFO     | this job has now completed (state=finished)
[2025-02-25 14:50:15] 2025-02-25 19:49:57,651 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-25 14:50:15] 2025-02-25 19:49:57,651 | INFO     | log transfer has been attempted: DONE
[2025-02-25 14:50:15] 2025-02-25 19:49:57,651 | INFO     | job 6530729238 has finished - writing final server update
[2025-02-25 14:50:15] 2025-02-25 19:49:57,651 | INFO     | total number of processed events: 400 (read)
[2025-02-25 14:50:15] 2025-02-25 19:49:57,653 | INFO     | executing command: lscpu
[2025-02-25 14:50:15] 2025-02-25 19:49:57,684 | INFO     | found 16 cores (8 cores per socket, 2 sockets)
[2025-02-25 14:50:15] 2025-02-25 19:49:57,698 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-25 14:50:15] 2025-02-25 19:49:58,375 | INFO     | PID=23521 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-02-25 14:50:15] 2025-02-25 19:49:58,376 | INFO     | .. there are 2 such processes running
[2025-02-25 14:50:15] 2025-02-25 19:49:58,401 | INFO     | monitor loop #338: job 0:6530729238 is in state 'finished'
[2025-02-25 14:50:15] 2025-02-25 19:49:58,402 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 14:50:15] 2025-02-25 19:50:00,905 | INFO     | monitor loop #339: job 0:6530729238 is in state 'finished'
[2025-02-25 14:50:15] 2025-02-25 19:50:00,905 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 14:50:15] 2025-02-25 19:50:02,360 | INFO     | CPU arch script returned: x86-64-v3
[2025-02-25 14:50:15] 2025-02-25 19:50:02,360 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6530729238/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 14:50:15] 2025-02-25 19:50:02,361 | INFO     | extracted standard info from prmon json
[2025-02-25 14:50:15] 2025-02-25 19:50:02,362 | INFO     | extracted standard memory fields from prmon json
[2025-02-25 14:50:15] 2025-02-25 19:50:02,362 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-25 14:50:15] 2025-02-25 19:50:02,362 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 14:50:15] 2025-02-25 19:50:02,362 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 14:50:15] 2025-02-25 19:50:02,364 | INFO     | fitting pss+swap vs Time
[2025-02-25 14:50:15] 2025-02-25 19:50:02,365 | INFO     | model: linear, x: [1740508722.0, 1740508783.0, 1740508844.0, 1740508905.0, 1740508966.0, 1740509027.0, 1740509088.0, 1740509149.0, 1740509210.0, 1740509271.0, 1740
[2025-02-25 14:50:15] 2025-02-25 19:50:02,365 | INFO     | sum of square deviations: 97479037.0
[2025-02-25 14:50:15] 2025-02-25 19:50:02,365 | INFO     | sum of deviations: 16467120647.5
[2025-02-25 14:50:15] 2025-02-25 19:50:02,365 | INFO     | mean x: 1740510765.5
[2025-02-25 14:50:15] 2025-02-25 19:50:02,365 | INFO     | mean y: 2417995.720588235
[2025-02-25 14:50:15] 2025-02-25 19:50:02,366 | INFO     | -- intersect: -294021832200.36084
[2025-02-25 14:50:15] 2025-02-25 19:50:02,366 | INFO     | intersect: -294021832200.36084
[2025-02-25 14:50:15] 2025-02-25 19:50:02,366 | INFO     | chi2: 1.9441913974475584
[2025-02-25 14:50:15] 2025-02-25 19:50:02,366 | INFO     | -- intersect: -294021832200.36084
[2025-02-25 14:50:15] 2025-02-25 19:50:02,366 | INFO     | current memory leak: 168.93 B/s (using 68 data points, chi2=1.94)
[2025-02-25 14:50:15] 2025-02-25 19:50:02,367 | INFO     | ..............................
[2025-02-25 14:50:15] 2025-02-25 19:50:02,367 | INFO     | . Timing measurements:
[2025-02-25 14:50:15] 2025-02-25 19:50:02,367 | INFO     | . get job = 0 s
[2025-02-25 14:50:15] 2025-02-25 19:50:02,367 | INFO     | . initial setup = 2 s
[2025-02-25 14:50:15] 2025-02-25 19:50:02,367 | INFO     | . payload setup = 7 s
[2025-02-25 14:50:15] 2025-02-25 19:50:02,367 | INFO     | . stage-in = 0 s
[2025-02-25 14:50:15] 2025-02-25 19:50:02,367 | INFO     | . payload execution = 4577 s
[2025-02-25 14:50:15] 2025-02-25 19:50:02,367 | INFO     | . stage-out = 0 s
[2025-02-25 14:50:15] 2025-02-25 19:50:02,367 | INFO     | . log creation = 0 s
[2025-02-25 14:50:15] 2025-02-25 19:50:02,368 | INFO     | ..............................
[2025-02-25 14:50:15] 2025-02-25 19:50:02,446 | INFO     | 
[2025-02-25 14:50:15] 2025-02-25 19:50:02,446 | INFO     | job summary report
[2025-02-25 14:50:15] 2025-02-25 19:50:02,446 | INFO     | --------------------------------------------------
[2025-02-25 14:50:15] 2025-02-25 19:50:02,446 | INFO     | PanDA job id: 6530729238
[2025-02-25 14:50:15] 2025-02-25 19:50:02,447 | INFO     | task id: 43401163
[2025-02-25 14:50:15] 2025-02-25 19:50:02,447 | INFO     | errors: (none)
[2025-02-25 14:50:15] 2025-02-25 19:50:02,447 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 14:50:15] 2025-02-25 19:50:02,447 | INFO     | pilot state: finished 
[2025-02-25 14:50:15] 2025-02-25 19:50:02,447 | INFO     | transexitcode: 0
[2025-02-25 14:50:15] 2025-02-25 19:50:02,447 | INFO     | exeerrorcode: 0
[2025-02-25 14:50:15] 2025-02-25 19:50:02,447 | INFO     | exeerrordiag: 
[2025-02-25 14:50:15] 2025-02-25 19:50:02,447 | INFO     | exitcode: 0
[2025-02-25 14:50:15] 2025-02-25 19:50:02,448 | INFO     | exitmsg: OK
[2025-02-25 14:50:15] 2025-02-25 19:50:02,448 | INFO     | cpuconsumptiontime: 29513 s
[2025-02-25 14:50:15] 2025-02-25 19:50:02,448 | INFO     | nevents: 400
[2025-02-25 14:50:15] 2025-02-25 19:50:02,448 | INFO     | neventsw: 0
[2025-02-25 14:50:15] 2025-02-25 19:50:02,448 | INFO     | pid: 29877
[2025-02-25 14:50:15] 2025-02-25 19:50:02,448 | INFO     | pgrp: 29877
[2025-02-25 14:50:15] 2025-02-25 19:50:02,448 | INFO     | corecount: 8
[2025-02-25 14:50:15] 2025-02-25 19:50:02,448 | INFO     | event service: False
[2025-02-25 14:50:15] 2025-02-25 19:50:02,448 | INFO     | sizes: {0: 2376943, 1: 2376943, 5: 2377177, 11: 2377233, 4588: 2403166, 4590: 2412107, 4592: 2412291, 4597: 2412461}
[2025-02-25 14:50:15] 2025-02-25 19:50:02,449 | INFO     | --------------------------------------------------
[2025-02-25 14:50:15] 2025-02-25 19:50:02,449 | INFO     | 
[2025-02-25 14:50:15] 2025-02-25 19:50:02,449 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-02-25 14:50:15] 2025-02-25 19:50:02,470 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 14:50:15] 2025-02-25 19:50:02,470 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 14:50:15] 2025-02-25 19:50:02,470 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 14:50:15] 2025-02-25 19:50:02,470 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 14:50:15] 2025-02-25 19:50:02,470 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 14:50:15] 2025-02-25 19:50:02,471 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 14:50:15] 2025-02-25 19:50:02,471 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 14:50:15] 2025-02-25 19:50:02,471 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 14:50:15] 2025-02-25 19:50:02,471 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 14:50:15] 2025-02-25 19:50:02,471 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 14:50:15] 2025-02-25 19:50:02,471 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 14:50:15] 2025-02-25 19:50:02,471 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 14:50:15] 2025-02-25 19:50:02,472 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 14:50:15] 2025-02-25 19:50:02,472 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 14:50:15] 2025-02-25 19:50:02,472 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 14:50:15] 2025-02-25 19:50:02,472 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 14:50:15] 2025-02-25 19:50:02,472 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 14:50:15] 2025-02-25 19:50:02,472 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 14:50:15] 2025-02-25 19:50:02,472 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 14:50:15] 2025-02-25 19:50:02,472 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 14:50:15] 2025-02-25 19:50:02,473 | INFO     | job 6530729238 has completed (purged errors)
[2025-02-25 14:50:15] 2025-02-25 19:50:02,473 | INFO     | overall cleanup function is called
[2025-02-25 14:50:15] 2025-02-25 19:50:03,481 | INFO     | --- collectZombieJob: --- 10, [29877]
[2025-02-25 14:50:15] 2025-02-25 19:50:03,481 | INFO     | zombie collector waiting for pid 29877
[2025-02-25 14:50:15] 2025-02-25 19:50:03,482 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 14:50:15] 2025-02-25 19:50:03,482 | INFO     | collected zombie processes
[2025-02-25 14:50:15] 2025-02-25 19:50:03,482 | INFO     | will attempt to kill all subprocesses of pid=29877
[2025-02-25 14:50:15] 2025-02-25 19:50:03,555 | INFO     | process IDs to be killed: [29877] (in reverse order)
[2025-02-25 14:50:15] 2025-02-25 19:50:03,614 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 14:50:15] 2025-02-25 19:50:03,615 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 14:50:15] 2025-02-25 19:50:03,618 | INFO     | did not find any defunct processes belonging to 29877
[2025-02-25 14:50:15] 2025-02-25 19:50:03,622 | INFO     | did not find any defunct processes belonging to 29877
[2025-02-25 14:50:15] 2025-02-25 19:50:03,622 | INFO     | ready for new job
[2025-02-25 14:50:15] 2025-02-25 19:50:03,622 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 14:50:15] 2025-02-25 19:50:03,624 | INFO     | **************************************
[2025-02-25 14:50:15] 2025-02-25 19:50:03,624 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 14:50:15] 2025-02-25 19:50:03,624 | INFO     | **************************************
[2025-02-25 14:50:15] 2025-02-25 19:50:03,624 | INFO     | 
[2025-02-25 14:50:15] 2025-02-25 19:50:03,626 | INFO     | architecture information:
[2025-02-25 14:50:15] 2025-02-25 19:50:03,626 | INFO     | executing command: cat /etc/os-release
[2025-02-25 14:50:15] 2025-02-25 19:50:03,639 | INFO     | cat /etc/os-release:
[2025-02-25 14:50:15] NAME="CentOS Linux"
[2025-02-25 14:50:15] VERSION="7 (Core)"
[2025-02-25 14:50:15] ID="centos"
[2025-02-25 14:50:15] ID_LIKE="rhel fedora"
[2025-02-25 14:50:15] VERSION_ID="7"
[2025-02-25 14:50:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 14:50:15] ANSI_COLOR="0;31"
[2025-02-25 14:50:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 14:50:15] HOME_URL="https://www.centos.org/"
[2025-02-25 14:50:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 14:50:15] 
[2025-02-25 14:50:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 14:50:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 14:50:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 14:50:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 14:50:15] 
[2025-02-25 14:50:15] 2025-02-25 19:50:03,640 | INFO     | **************************************
[2025-02-25 14:50:15] 2025-02-25 19:50:04,143 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-02-25 14:50:15] 2025-02-25 19:50:04,158 | INFO     | sufficient remaining disk space (32754368512 B)
[2025-02-25 14:50:15] 2025-02-25 19:50:04,159 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 14:50:15] 2025-02-25 19:50:04,159 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 14:50:15] 2025-02-25 19:50:04,159 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 14:50:15] 2025-02-25 19:50:04,159 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 14:50:15] 2025-02-25 19:50:04,299 | INFO     | all data control threads have been joined
[2025-02-25 14:50:15] 2025-02-25 19:50:04,398 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 14:50:15] 2025-02-25 19:50:04,398 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 14:50:15] 2025-02-25 19:50:04,398 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 14:50:15] 2025-02-25 19:50:04,413 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 14:50:15] 2025-02-25 19:50:04,414 | INFO     | aborting loop
[2025-02-25 14:50:15] 2025-02-25 19:50:04,602 | INFO     | all job control threads have been joined
[2025-02-25 14:50:15] 2025-02-25 19:50:04,707 | INFO     | all payload control threads have been joined
[2025-02-25 14:50:15] 2025-02-25 19:50:05,164 | INFO     | [job] retrieve thread has finished
[2025-02-25 14:50:15] 2025-02-25 19:50:05,165 | INFO     | [job] queue monitor thread has finished
[2025-02-25 14:50:15] 2025-02-25 19:50:05,304 | INFO     | [data] control thread has finished
[2025-02-25 14:50:15] 2025-02-25 19:50:05,339 | INFO     | [payload] validate_post thread has finished
[2025-02-25 14:50:15] 2025-02-25 19:50:05,412 | INFO     | [data] copytool_in thread has finished
[2025-02-25 14:50:15] 2025-02-25 19:50:05,419 | INFO     | [job] job monitor thread has finished
[2025-02-25 14:50:15] 2025-02-25 19:50:05,533 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 14:50:15] 2025-02-25 19:50:05,607 | INFO     | [job] control thread has finished
[2025-02-25 14:50:15] 2025-02-25 19:50:05,655 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 14:50:15] 2025-02-25 19:50:05,713 | INFO     | [payload] control thread has finished
[2025-02-25 14:50:15] 2025-02-25 19:50:05,985 | INFO     | [payload] failed_post thread has finished
[2025-02-25 14:50:15] 2025-02-25 19:50:06,051 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 14:50:15] 2025-02-25 19:50:06,191 | INFO     | [job] validate thread has finished
[2025-02-25 14:50:15] 2025-02-25 19:50:06,402 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 14:50:15] 2025-02-25 19:50:06,479 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 14:50:15] 2025-02-25 19:50:07,660 | INFO     | [data] copytool_out thread has finished
[2025-02-25 14:50:15] 2025-02-25 19:50:08,165 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 14:50:15] 2025-02-25 19:50:10,028 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139845111420736)>', '<ExcThread(monitor, started 139844403590912)>']
[2025-02-25 14:50:15] 2025-02-25 19:50:10,429 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 14:50:15] 2025-02-25 19:50:10,429 | INFO     | [monitor] control thread has ended
[2025-02-25 14:50:15] 2025-02-25 19:50:15,053 | INFO     | all workflow threads have been joined
[2025-02-25 14:50:15] 2025-02-25 19:50:15,054 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 14:50:15] 2025-02-25 19:50:15,054 | INFO     | traces error code: 0
[2025-02-25 14:50:15] 2025-02-25 19:50:15,055 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 14:50:15] 2025-02-25 19:50:15,151 [wrapper] ==== pilot stdout END ====
[2025-02-25 14:50:15] 2025-02-25 19:50:15,155 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 14:50:15] 2025-02-25 19:50:15,158 [wrapper] pilotpid: 23521
[2025-02-25 14:50:15] 2025-02-25 19:50:15,162 [wrapper] Pilot exit status: 0
[2025-02-25 14:50:15] 2025-02-25 19:50:15,175 [wrapper] pandaids: 6530729238
[2025-02-25 14:50:15] 2025-02-25 19:50:15,216 [wrapper] cleanup supervisor_pilot 15402 23522
[2025-02-25 14:50:15] 2025-02-25 19:50:15,220 [wrapper] Test setup, not cleaning
[2025-02-25 14:50:15] 2025-02-25 19:50:15,227 [wrapper] apfmon messages muted
[2025-02-25 14:50:15] 2025-02-25 19:50:15,231 [wrapper] ==== wrapper stdout END ====
[2025-02-25 14:50:15] 2025-02-25 19:50:15,234 [wrapper] ==== wrapper stderr END ====
[2025-02-25 14:50:15]  *** Error codes and diagnostics ***
[2025-02-25 14:50:15]     "exeErrorCode": 0,
[2025-02-25 14:50:15]     "exeErrorDiag": "",
[2025-02-25 14:50:15]     "pilotErrorCode": 0,
[2025-02-25 14:50:15]     "pilotErrorDiag": "",
[2025-02-25 14:50:15]  *** Listing of results directory ***
[2025-02-25 14:50:15] total 426464
[2025-02-25 14:50:15] -rw-r--r-- 1 boincer umatlas    491065 Feb 25 13:15 pilot3.tar.gz
[2025-02-25 14:50:15] -rw-r--r-- 1 boincer umatlas      5118 Feb 25 13:30 queuedata.json
[2025-02-25 14:50:15] -rwx------ 1 boincer umatlas     35865 Feb 25 13:30 runpilot2-wrapper.sh
[2025-02-25 14:50:15] -rw-r--r-- 1 boincer umatlas       100 Feb 25 13:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 14:50:15] -rwxr-xr-x 1 boincer umatlas      7986 Feb 25 13:32 run_atlas
[2025-02-25 14:50:15] -rw-r--r-- 1 boincer umatlas       105 Feb 25 13:32 job.xml
[2025-02-25 14:50:15] -rw-r--r-- 2 boincer umatlas 249204638 Feb 25 13:32 EVNT.43401161._000055.pool.root.1
[2025-02-25 14:50:15] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 13:32 start_atlas.sh
[2025-02-25 14:50:15] drwxrwx--x 2 boincer umatlas      4096 Feb 25 13:32 shared
[2025-02-25 14:50:15] -rw-r--r-- 2 boincer umatlas    503552 Feb 25 13:32 input.tar.gz
[2025-02-25 14:50:15] -rw-r--r-- 1 boincer umatlas         0 Feb 25 13:32 boinc_lockfile
[2025-02-25 14:50:15] -rw-r--r-- 1 boincer umatlas      2541 Feb 25 13:32 pandaJob.out
[2025-02-25 14:50:15] -rw------- 1 boincer umatlas       424 Feb 25 13:32 setup.sh.local
[2025-02-25 14:50:15] -rw------- 1 boincer umatlas    988266 Feb 25 13:33 agis_schedconf.cvmfs.json
[2025-02-25 14:50:15] -rw------- 1 boincer umatlas   1577983 Feb 25 13:33 agis_ddmendpoints.agis.ALL.json
[2025-02-25 14:50:15] drwx------ 4 boincer umatlas      4096 Feb 25 13:33 pilot3
[2025-02-25 14:50:15] -rw-r--r-- 1 boincer umatlas      6049 Feb 25 14:47 init_data.xml
[2025-02-25 14:50:15] -rw-r--r-- 1 boincer umatlas       529 Feb 25 14:49 boinc_task_state.xml
[2025-02-25 14:50:15] -rw------- 1 boincer umatlas 182192152 Feb 25 14:49 HITS.43401163._001375.pool.root.1
[2025-02-25 14:50:15] -rw------- 1 boincer umatlas      1044 Feb 25 14:49 memory_monitor_summary.json
[2025-02-25 14:50:15] -rw------- 1 boincer umatlas    303656 Feb 25 14:49 log.43401163._001375.job.log.tgz.1
[2025-02-25 14:50:15] -rw-r--r-- 1 boincer umatlas      8192 Feb 25 14:49 boinc_mmap_file
[2025-02-25 14:50:15] -rw-r--r-- 1 boincer umatlas        27 Feb 25 14:49 wrapper_checkpoint.txt
[2025-02-25 14:50:15] -rw------- 1 boincer umatlas      7750 Feb 25 14:50 heartbeat.json
[2025-02-25 14:50:15] -rw------- 1 boincer umatlas        95 Feb 25 14:50 pilot_heartbeat.json
[2025-02-25 14:50:15] -rw------- 1 boincer umatlas      4215 Feb 25 14:50 pilotlog.txt
[2025-02-25 14:50:15] -rw------- 1 boincer umatlas    448713 Feb 25 14:50 log.43401163._001375.job.log.1
[2025-02-25 14:50:15] -rw------- 1 boincer umatlas       357 Feb 25 14:50 output.list
[2025-02-25 14:50:15] -rw-r--r-- 1 boincer umatlas       620 Feb 25 14:50 runtime_log
[2025-02-25 14:50:15] -rw------- 1 boincer umatlas    768000 Feb 25 14:50 result.tar.gz
[2025-02-25 14:50:15] -rw------- 1 boincer umatlas       657 Feb 25 14:50 YVGMDmcsE76n9Rq4apOajLDm4fhM0noT9bVoFjIUDmK7fKDm3uyWNm.diag
[2025-02-25 14:50:15] -rw-r--r-- 1 boincer umatlas     11013 Feb 25 14:50 runtime_log.err
[2025-02-25 14:50:15] -rw-r--r-- 1 boincer umatlas     21571 Feb 25 14:50 stderr.txt
[2025-02-25 14:50:15] HITS file was successfully produced:
[2025-02-25 14:50:15] -rw------- 1 boincer umatlas 182192152 Feb 25 14:49 shared/HITS.pool.root.1
[2025-02-25 14:50:15]  *** Contents of shared directory: ***
[2025-02-25 14:50:15] total 422556
[2025-02-25 14:50:15] -rw-r--r-- 2 boincer umatlas 249204638 Feb 25 13:32 ATLAS.root_0
[2025-02-25 14:50:15] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 13:32 start_atlas.sh
[2025-02-25 14:50:15] -rw-r--r-- 2 boincer umatlas    503552 Feb 25 13:32 input.tar.gz
[2025-02-25 14:50:15] -rw------- 1 boincer umatlas 182192152 Feb 25 14:49 HITS.pool.root.1
[2025-02-25 14:50:15] -rw------- 1 boincer umatlas    768000 Feb 25 14:50 result.tar.gz
14:50:17 (19851): run_atlas exited; CPU time 29470.664957
14:50:17 (19851): called boinc_finish(0)

</stderr_txt>
]]>

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