Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:31:22 (3340): wrapper (7.7.26015): starting
13:31:22 (3340): wrapper: running run_atlas (--nthreads 8)
[2025-02-25 13:31:22] Arguments: --nthreads 8
[2025-02-25 13:31:22] Threads: 8
[2025-02-25 13:31:22] Checking for CVMFS
[2025-02-25 13:31:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 13:31:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 13:31:22] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 13:31:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 13:31:22] 2.11.2.0 3761 175231 220680 143048 0 56 17633017 20275200 92 130560 0 47938212 99.995 7047190 40111 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-25 13:31:22] CVMFS is ok
[2025-02-25 13:31:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 13:31:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 13:31:22] Further information can be found at the LHC@home message board.
[2025-02-25 13:31:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 13:31:22] Checking for apptainer binary...
[2025-02-25 13:31:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 13:31:22] Running /usr/bin/apptainer --version
[2025-02-25 13:31:22] apptainer version 1.3.2-1.el7
[2025-02-25 13:31:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 13:31:24] c-205-36.aglt2.org
[2025-02-25 13:31:24] apptainer works
[2025-02-25 13:31:24] Set ATHENA_PROC_NUMBER=8
[2025-02-25 13:31:24] Set ATHENA_CORE_NUMBER=8
[2025-02-25 13:31:24] Starting ATLAS job with PandaID=6530729336
[2025-02-25 13:31:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 14:45:04]  *** The last 200 lines of the pilot log: ***
[2025-02-25 14:45:04]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-02-25 14:45:04]  is_altstaged=None
[2025-02-25 14:45:04]  is_tar=False
[2025-02-25 14:45:04]  lfn=log.43401163._001473.job.log.tgz.1
[2025-02-25 14:45:04]  mtime=0
[2025-02-25 14:45:04]  protocol_id=None
[2025-02-25 14:45:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-25 14:45:04]  replicas=None
[2025-02-25 14:45:04]  scope=mc23_13p6TeV
[2025-02-25 14:45:04]  status=None
[2025-02-25 14:45:04]  status_code=0
[2025-02-25 14:45:04]  storage_token=
[2025-02-25 14:45:04]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6530729336/log.43401163._001473.job.log.tgz.1
[2025-02-25 14:45:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2a/ed/log.43401163._001473.job.log.tgz.1
[2025-02-25 14:45:04]  workdir=None
[2025-02-25 14:45:04] ]
[2025-02-25 14:45:04] 2025-02-25 19:44:41,636 | INFO     | transferring file log.43401163._001473.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6530729336/log.43401163._001473.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-02-25 14:45:04] 2025-02-25 19:44:41,637 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6530729336/log.43401163._001473.job.log.tgz.1 /tmp/boinchome/slots/0/log.43401163._001473.job
[2025-02-25 14:45:04] 2025-02-25 19:44:41,656 | INFO     | adding to output.list: log.43401163._001473.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2a/ed/log.43401163._001473.job.log.tg
[2025-02-25 14:45:04] 2025-02-25 19:44:41,657 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-25 14:45:04] 2025-02-25 19:44:41,657 | INFO     | summary of transferred files:
[2025-02-25 14:45:04] 2025-02-25 19:44:41,657 | INFO     |  -- lfn=log.43401163._001473.job.log.tgz.1, status_code=0, status=transferred
[2025-02-25 14:45:04] 2025-02-25 19:44:41,657 | INFO     | stage-out finished correctly
[2025-02-25 14:45:04] 2025-02-25 19:44:43,145 | INFO     | PID=7039 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-02-25 14:45:04] 2025-02-25 19:44:43,145 | INFO     | .. there are 2 such processes running
[2025-02-25 14:45:04] 2025-02-25 19:44:43,603 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-25 14:45:04] 2025-02-25 19:44:44,487 | INFO     | job 6530729336 has state=finished
[2025-02-25 14:45:04] 2025-02-25 19:44:44,488 | INFO     | preparing for final server update for job 6530729336 in state='finished'
[2025-02-25 14:45:04] 2025-02-25 19:44:44,488 | INFO     | this job has now completed (state=finished)
[2025-02-25 14:45:04] 2025-02-25 19:44:44,488 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-25 14:45:04] 2025-02-25 19:44:44,489 | INFO     | log transfer has been attempted: DONE
[2025-02-25 14:45:04] 2025-02-25 19:44:44,489 | INFO     | job 6530729336 has finished - writing final server update
[2025-02-25 14:45:04] 2025-02-25 19:44:44,489 | INFO     | total number of processed events: 400 (read)
[2025-02-25 14:45:04] 2025-02-25 19:44:44,490 | INFO     | executing command: lscpu
[2025-02-25 14:45:04] 2025-02-25 19:44:44,512 | INFO     | found 16 cores (8 cores per socket, 2 sockets)
[2025-02-25 14:45:04] 2025-02-25 19:44:44,525 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-25 14:45:04] 2025-02-25 19:44:50,109 | INFO     | CPU arch script returned: x86-64-v3
[2025-02-25 14:45:04] 2025-02-25 19:44:50,110 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6530729336/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 14:45:04] 2025-02-25 19:44:50,115 | INFO     | extracted standard info from prmon json
[2025-02-25 14:45:04] 2025-02-25 19:44:50,116 | INFO     | extracted standard memory fields from prmon json
[2025-02-25 14:45:04] 2025-02-25 19:44:50,116 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-25 14:45:04] 2025-02-25 19:44:50,116 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 14:45:04] 2025-02-25 19:44:50,116 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 14:45:04] 2025-02-25 19:44:50,118 | INFO     | fitting pss+swap vs Time
[2025-02-25 14:45:04] 2025-02-25 19:44:50,118 | INFO     | model: linear, x: [1740508629.0, 1740508690.0, 1740508751.0, 1740508812.0, 1740508873.0, 1740508934.0, 1740508995.0, 1740509056.0, 1740509117.0, 1740509178.0, 1740
[2025-02-25 14:45:04] 2025-02-25 19:44:50,118 | INFO     | sum of square deviations: 85136480.0
[2025-02-25 14:45:04] 2025-02-25 19:44:50,119 | INFO     | sum of deviations: 15149480357.000002
[2025-02-25 14:45:04] 2025-02-25 19:44:50,119 | INFO     | mean x: 1740510581.0
[2025-02-25 14:45:04] 2025-02-25 19:44:50,119 | INFO     | mean y: 2416838.7230769233
[2025-02-25 14:45:04] 2025-02-25 19:44:50,119 | INFO     | -- intersect: -309710069019.3974
[2025-02-25 14:45:04] 2025-02-25 19:44:50,119 | INFO     | intersect: -309710069019.3974
[2025-02-25 14:45:04] 2025-02-25 19:44:50,119 | INFO     | chi2: 1.9144896811640966
[2025-02-25 14:45:04] 2025-02-25 19:44:50,119 | INFO     | -- intersect: -309710069019.3974
[2025-02-25 14:45:04] 2025-02-25 19:44:50,119 | INFO     | current memory leak: 177.94 B/s (using 65 data points, chi2=1.91)
[2025-02-25 14:45:04] 2025-02-25 19:44:50,119 | INFO     | ..............................
[2025-02-25 14:45:04] 2025-02-25 19:44:50,119 | INFO     | . Timing measurements:
[2025-02-25 14:45:04] 2025-02-25 19:44:50,120 | INFO     | . get job = 0 s
[2025-02-25 14:45:04] 2025-02-25 19:44:50,120 | INFO     | . initial setup = 2 s
[2025-02-25 14:45:04] 2025-02-25 19:44:50,120 | INFO     | . payload setup = 7 s
[2025-02-25 14:45:04] 2025-02-25 19:44:50,120 | INFO     | . stage-in = 0 s
[2025-02-25 14:45:04] 2025-02-25 19:44:50,120 | INFO     | . payload execution = 4356 s
[2025-02-25 14:45:04] 2025-02-25 19:44:50,120 | INFO     | . stage-out = 0 s
[2025-02-25 14:45:04] 2025-02-25 19:44:50,120 | INFO     | . log creation = 0 s
[2025-02-25 14:45:04] 2025-02-25 19:44:50,120 | INFO     | ..............................
[2025-02-25 14:45:04] 2025-02-25 19:44:50,175 | INFO     | 
[2025-02-25 14:45:04] 2025-02-25 19:44:50,175 | INFO     | job summary report
[2025-02-25 14:45:04] 2025-02-25 19:44:50,176 | INFO     | --------------------------------------------------
[2025-02-25 14:45:04] 2025-02-25 19:44:50,176 | INFO     | PanDA job id: 6530729336
[2025-02-25 14:45:04] 2025-02-25 19:44:50,176 | INFO     | task id: 43401163
[2025-02-25 14:45:04] 2025-02-25 19:44:50,176 | INFO     | errors: (none)
[2025-02-25 14:45:04] 2025-02-25 19:44:50,176 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 14:45:04] 2025-02-25 19:44:50,176 | INFO     | pilot state: finished 
[2025-02-25 14:45:04] 2025-02-25 19:44:50,176 | INFO     | transexitcode: 0
[2025-02-25 14:45:04] 2025-02-25 19:44:50,176 | INFO     | exeerrorcode: 0
[2025-02-25 14:45:04] 2025-02-25 19:44:50,177 | INFO     | exeerrordiag: 
[2025-02-25 14:45:04] 2025-02-25 19:44:50,180 | WARNING  | process 13411 can no longer be monitored (due to stat problems) - aborting
[2025-02-25 14:45:04] 2025-02-25 19:44:50,180 | INFO     | exitcode: 0
[2025-02-25 14:45:04] 2025-02-25 19:44:50,181 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6530729336/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 14:45:04] 2025-02-25 19:44:50,181 | INFO     | exitmsg: OK
[2025-02-25 14:45:04] 2025-02-25 19:44:50,181 | INFO     | cpuconsumptiontime: 28427 s
[2025-02-25 14:45:04] 2025-02-25 19:44:50,181 | INFO     | nevents: 400
[2025-02-25 14:45:04] 2025-02-25 19:44:50,182 | INFO     | neventsw: 0
[2025-02-25 14:45:04] 2025-02-25 19:44:50,182 | INFO     | pid: 13411
[2025-02-25 14:45:04] 2025-02-25 19:44:50,187 | INFO     | pgrp: 13411
[2025-02-25 14:45:04] 2025-02-25 19:44:50,188 | INFO     | corecount: 8
[2025-02-25 14:45:04] 2025-02-25 19:44:50,188 | INFO     | event service: False
[2025-02-25 14:45:04] 2025-02-25 19:44:50,188 | INFO     | sizes: {0: 2376943, 1: 2376943, 5: 2377177, 11: 2377233, 4367: 2403111, 4368: 2403110, 4370: 2412235, 4372: 2412291, 4378: 2412461}
[2025-02-25 14:45:04] 2025-02-25 19:44:50,188 | INFO     | --------------------------------------------------
[2025-02-25 14:45:04] 2025-02-25 19:44:50,188 | INFO     | 
[2025-02-25 14:45:04] 2025-02-25 19:44:50,189 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-25 14:45:04] 2025-02-25 19:44:50,208 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 14:45:04] 2025-02-25 19:44:50,209 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 14:45:04] 2025-02-25 19:44:50,209 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 14:45:04] 2025-02-25 19:44:50,209 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 14:45:04] 2025-02-25 19:44:50,209 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 14:45:04] 2025-02-25 19:44:50,209 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 14:45:04] 2025-02-25 19:44:50,209 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 14:45:04] 2025-02-25 19:44:50,210 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 14:45:04] 2025-02-25 19:44:50,210 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 14:45:04] 2025-02-25 19:44:50,210 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 14:45:04] 2025-02-25 19:44:50,210 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 14:45:04] 2025-02-25 19:44:50,210 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 14:45:04] 2025-02-25 19:44:50,210 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 14:45:04] 2025-02-25 19:44:50,210 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 14:45:04] 2025-02-25 19:44:50,210 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 14:45:04] 2025-02-25 19:44:50,211 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 14:45:04] 2025-02-25 19:44:50,211 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 14:45:04] 2025-02-25 19:44:50,211 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 14:45:04] 2025-02-25 19:44:50,211 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 14:45:04] 2025-02-25 19:44:50,211 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 14:45:04] 2025-02-25 19:44:50,211 | INFO     | job 6530729336 has completed (purged errors)
[2025-02-25 14:45:04] 2025-02-25 19:44:50,211 | INFO     | overall cleanup function is called
[2025-02-25 14:45:04] 2025-02-25 19:44:50,235 | INFO     | number of running child processes to parent process 13411: 1
[2025-02-25 14:45:04] 2025-02-25 19:44:50,236 | INFO     | maximum number of monitored processes: 6
[2025-02-25 14:45:04] 2025-02-25 19:44:50,236 | INFO     | aborting job monitoring since job object (job id=6530729336) has expired
[2025-02-25 14:45:04] 2025-02-25 19:44:51,220 | INFO     | --- collectZombieJob: --- 10, [13411]
[2025-02-25 14:45:04] 2025-02-25 19:44:51,220 | INFO     | zombie collector waiting for pid 13411
[2025-02-25 14:45:04] 2025-02-25 19:44:51,220 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 14:45:04] 2025-02-25 19:44:51,220 | INFO     | collected zombie processes
[2025-02-25 14:45:04] 2025-02-25 19:44:51,220 | INFO     | will attempt to kill all subprocesses of pid=13411
[2025-02-25 14:45:04] 2025-02-25 19:44:51,296 | INFO     | process IDs to be killed: [13411] (in reverse order)
[2025-02-25 14:45:04] 2025-02-25 19:44:51,351 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 14:45:04] 2025-02-25 19:44:51,351 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 14:45:04] 2025-02-25 19:44:51,355 | INFO     | did not find any defunct processes belonging to 13411
[2025-02-25 14:45:04] 2025-02-25 19:44:51,359 | INFO     | did not find any defunct processes belonging to 13411
[2025-02-25 14:45:04] 2025-02-25 19:44:51,360 | INFO     | ready for new job
[2025-02-25 14:45:04] 2025-02-25 19:44:51,360 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 14:45:04] 2025-02-25 19:44:51,362 | INFO     | **************************************
[2025-02-25 14:45:04] 2025-02-25 19:44:51,362 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 14:45:04] 2025-02-25 19:44:51,362 | INFO     | **************************************
[2025-02-25 14:45:04] 2025-02-25 19:44:51,362 | INFO     | 
[2025-02-25 14:45:04] 2025-02-25 19:44:51,363 | INFO     | architecture information:
[2025-02-25 14:45:04] 2025-02-25 19:44:51,364 | INFO     | executing command: cat /etc/os-release
[2025-02-25 14:45:04] 2025-02-25 19:44:51,378 | INFO     | cat /etc/os-release:
[2025-02-25 14:45:04] NAME="CentOS Linux"
[2025-02-25 14:45:04] VERSION="7 (Core)"
[2025-02-25 14:45:04] ID="centos"
[2025-02-25 14:45:04] ID_LIKE="rhel fedora"
[2025-02-25 14:45:04] VERSION_ID="7"
[2025-02-25 14:45:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 14:45:04] ANSI_COLOR="0;31"
[2025-02-25 14:45:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 14:45:04] HOME_URL="https://www.centos.org/"
[2025-02-25 14:45:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 14:45:04] 
[2025-02-25 14:45:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 14:45:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 14:45:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 14:45:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 14:45:04] 
[2025-02-25 14:45:04] 2025-02-25 19:44:51,379 | INFO     | **************************************
[2025-02-25 14:45:04] 2025-02-25 19:44:51,882 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-25 14:45:04] 2025-02-25 19:44:51,899 | INFO     | sufficient remaining disk space (32582402048 B)
[2025-02-25 14:45:04] 2025-02-25 19:44:51,899 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 14:45:04] 2025-02-25 19:44:51,900 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 14:45:04] 2025-02-25 19:44:51,900 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 14:45:04] 2025-02-25 19:44:51,900 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-25 14:45:04] 2025-02-25 19:44:51,901 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 14:45:04] 2025-02-25 19:44:51,901 | INFO     | aborting loop
[2025-02-25 14:45:04] 2025-02-25 19:44:51,901 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 14:45:04] 2025-02-25 19:44:51,902 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 14:45:04] 2025-02-25 19:44:51,902 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 14:45:04] 2025-02-25 19:44:52,219 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 14:45:04] 2025-02-25 19:44:52,362 | INFO     | all data control threads have been joined
[2025-02-25 14:45:04] 2025-02-25 19:44:52,552 | INFO     | all payload control threads have been joined
[2025-02-25 14:45:04] 2025-02-25 19:44:52,905 | INFO     | [job] retrieve thread has finished
[2025-02-25 14:45:04] 2025-02-25 19:44:52,907 | INFO     | [job] queue monitor thread has finished
[2025-02-25 14:45:04] 2025-02-25 19:44:52,907 | INFO     | [job] job monitor thread has finished
[2025-02-25 14:45:04] 2025-02-25 19:44:52,954 | INFO     | [data] copytool_in thread has finished
[2025-02-25 14:45:04] 2025-02-25 19:44:53,028 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 14:45:04] 2025-02-25 19:44:53,060 | INFO     | all job control threads have been joined
[2025-02-25 14:45:04] 2025-02-25 19:44:53,107 | INFO     | [payload] failed_post thread has finished
[2025-02-25 14:45:04] 2025-02-25 19:44:53,367 | INFO     | [data] control thread has finished
[2025-02-25 14:45:04] 2025-02-25 19:44:53,556 | INFO     | [payload] control thread has finished
[2025-02-25 14:45:04] 2025-02-25 19:44:53,626 | INFO     | [payload] validate_post thread has finished
[2025-02-25 14:45:04] 2025-02-25 19:44:53,646 | INFO     | [job] validate thread has finished
[2025-02-25 14:45:04] 2025-02-25 19:44:53,818 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 14:45:04] 2025-02-25 19:44:53,950 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 14:45:04] 2025-02-25 19:44:53,959 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 14:45:04] 2025-02-25 19:44:54,065 | INFO     | [job] control thread has finished
[2025-02-25 14:45:04] 2025-02-25 19:44:54,198 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 14:45:04] 2025-02-25 19:44:54,225 | INFO     | [data] copytool_out thread has finished
[2025-02-25 14:45:04] 2025-02-25 19:44:58,204 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 14:45:04] 2025-02-25 19:44:59,376 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140212752107328)>', '<ExcThread(monitor, started 140211891730176)>']
[2025-02-25 14:45:04] 2025-02-25 19:44:59,939 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 14:45:04] 2025-02-25 19:44:59,940 | INFO     | [monitor] control thread has ended
[2025-02-25 14:45:04] 2025-02-25 19:45:04,402 | INFO     | all workflow threads have been joined
[2025-02-25 14:45:04] 2025-02-25 19:45:04,403 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 14:45:04] 2025-02-25 19:45:04,403 | INFO     | traces error code: 0
[2025-02-25 14:45:04] 2025-02-25 19:45:04,404 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 14:45:04] 2025-02-25 19:45:04,531 [wrapper] ==== pilot stdout END ====
[2025-02-25 14:45:04] 2025-02-25 19:45:04,535 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 14:45:04] 2025-02-25 19:45:04,538 [wrapper] pilotpid: 7039
[2025-02-25 14:45:04] 2025-02-25 19:45:04,542 [wrapper] Pilot exit status: 0
[2025-02-25 14:45:04] 2025-02-25 19:45:04,558 [wrapper] pandaids: 6530729336
[2025-02-25 14:45:04] 2025-02-25 19:45:04,590 [wrapper] cleanup supervisor_pilot 21288 7040
[2025-02-25 14:45:04] 2025-02-25 19:45:04,593 [wrapper] Test setup, not cleaning
[2025-02-25 14:45:04] 2025-02-25 19:45:04,601 [wrapper] apfmon messages muted
[2025-02-25 14:45:04] 2025-02-25 19:45:04,604 [wrapper] ==== wrapper stdout END ====
[2025-02-25 14:45:04] 2025-02-25 19:45:04,608 [wrapper] ==== wrapper stderr END ====
[2025-02-25 14:45:04]  *** Error codes and diagnostics ***
[2025-02-25 14:45:04]     "exeErrorCode": 0,
[2025-02-25 14:45:04]     "exeErrorDiag": "",
[2025-02-25 14:45:04]     "pilotErrorCode": 0,
[2025-02-25 14:45:04]     "pilotErrorDiag": "",
[2025-02-25 14:45:04]  *** Listing of results directory ***
[2025-02-25 14:45:04] total 425420
[2025-02-25 14:45:04] -rw-r--r-- 1 boincer umatlas    491065 Feb 25 13:15 pilot3.tar.gz
[2025-02-25 14:45:04] -rw-r--r-- 1 boincer umatlas      5118 Feb 25 13:30 queuedata.json
[2025-02-25 14:45:04] -rwx------ 1 boincer umatlas     35865 Feb 25 13:30 runpilot2-wrapper.sh
[2025-02-25 14:45:04] -rw-r--r-- 1 boincer umatlas       100 Feb 25 13:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 14:45:04] -rwxr-xr-x 1 boincer umatlas      7986 Feb 25 13:31 run_atlas
[2025-02-25 14:45:04] -rw-r--r-- 1 boincer umatlas       105 Feb 25 13:31 job.xml
[2025-02-25 14:45:04] -rw-r--r-- 2 boincer umatlas 253579753 Feb 25 13:31 EVNT.43401161._000059.pool.root.1
[2025-02-25 14:45:04] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 13:31 start_atlas.sh
[2025-02-25 14:45:04] drwxrwx--x 2 boincer umatlas      4096 Feb 25 13:31 shared
[2025-02-25 14:45:04] -rw-r--r-- 2 boincer umatlas    503548 Feb 25 13:31 input.tar.gz
[2025-02-25 14:45:04] -rw-r--r-- 1 boincer umatlas         0 Feb 25 13:31 boinc_lockfile
[2025-02-25 14:45:04] -rw-r--r-- 1 boincer umatlas      2541 Feb 25 13:31 pandaJob.out
[2025-02-25 14:45:04] -rw------- 1 boincer umatlas       424 Feb 25 13:31 setup.sh.local
[2025-02-25 14:45:04] -rw------- 1 boincer umatlas    988266 Feb 25 13:31 agis_schedconf.cvmfs.json
[2025-02-25 14:45:04] -rw------- 1 boincer umatlas   1577983 Feb 25 13:31 agis_ddmendpoints.agis.ALL.json
[2025-02-25 14:45:04] drwx------ 4 boincer umatlas      4096 Feb 25 13:31 pilot3
[2025-02-25 14:45:04] -rw-r--r-- 1 boincer umatlas      6049 Feb 25 14:39 init_data.xml
[2025-02-25 14:45:04] -rw------- 1 boincer umatlas 176791075 Feb 25 14:44 HITS.43401163._001473.pool.root.1
[2025-02-25 14:45:04] -rw------- 1 boincer umatlas        95 Feb 25 14:44 pilot_heartbeat.json
[2025-02-25 14:45:04] -rw-r--r-- 1 boincer umatlas       529 Feb 25 14:44 boinc_task_state.xml
[2025-02-25 14:45:04] -rw------- 1 boincer umatlas      1041 Feb 25 14:44 memory_monitor_summary.json
[2025-02-25 14:45:04] -rw------- 1 boincer umatlas    299453 Feb 25 14:44 log.43401163._001473.job.log.tgz.1
[2025-02-25 14:45:04] -rw------- 1 boincer umatlas      7749 Feb 25 14:44 heartbeat.json
[2025-02-25 14:45:04] -rw-r--r-- 1 boincer umatlas      8192 Feb 25 14:45 boinc_mmap_file
[2025-02-25 14:45:04] -rw-r--r-- 1 boincer umatlas        27 Feb 25 14:45 wrapper_checkpoint.txt
[2025-02-25 14:45:04] -rw------- 1 boincer umatlas      4338 Feb 25 14:45 pilotlog.txt
[2025-02-25 14:45:04] -rw------- 1 boincer umatlas    429834 Feb 25 14:45 log.43401163._001473.job.log.1
[2025-02-25 14:45:04] -rw------- 1 boincer umatlas       357 Feb 25 14:45 output.list
[2025-02-25 14:45:04] -rw-r--r-- 1 boincer umatlas       620 Feb 25 14:45 runtime_log
[2025-02-25 14:45:04] -rw------- 1 boincer umatlas    747520 Feb 25 14:45 result.tar.gz
[2025-02-25 14:45:04] -rw-r--r-- 1 boincer umatlas     11013 Feb 25 14:45 runtime_log.err
[2025-02-25 14:45:04] -rw------- 1 boincer umatlas       658 Feb 25 14:45 JIMLDmcsE76nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm2wwKDmXoHEsm.diag
[2025-02-25 14:45:04] -rw-r--r-- 1 boincer umatlas     21605 Feb 25 14:45 stderr.txt
[2025-02-25 14:45:04] HITS file was successfully produced:
[2025-02-25 14:45:04] -rw------- 1 boincer umatlas 176791075 Feb 25 14:44 shared/HITS.pool.root.1
[2025-02-25 14:45:04]  *** Contents of shared directory: ***
[2025-02-25 14:45:04] total 421536
[2025-02-25 14:45:04] -rw-r--r-- 2 boincer umatlas 253579753 Feb 25 13:31 ATLAS.root_0
[2025-02-25 14:45:04] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 13:31 start_atlas.sh
[2025-02-25 14:45:04] -rw-r--r-- 2 boincer umatlas    503548 Feb 25 13:31 input.tar.gz
[2025-02-25 14:45:04] -rw------- 1 boincer umatlas 176791075 Feb 25 14:44 HITS.pool.root.1
[2025-02-25 14:45:04] -rw------- 1 boincer umatlas    747520 Feb 25 14:45 result.tar.gz
14:45:05 (3340): run_atlas exited; CPU time 28396.526161
14:45:05 (3340): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN