Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:46:08 (999324): wrapper (7.7.26015): starting
14:46:08 (999324): wrapper: running run_atlas (--nthreads 9)
[2025-02-25 14:46:08] Arguments: --nthreads 9
[2025-02-25 14:46:08] Threads: 9
[2025-02-25 14:46:08] Checking for CVMFS
[2025-02-25 14:46:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 14:46:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 14:46:08] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 14:46:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 14:46:09] 2.11.5.0 3491167 16480 312048 143050 3 277 22191251 37641217 21233 130560 0 902488 96.928 6895187 36675 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-02-25 14:46:09] CVMFS is ok
[2025-02-25 14:46:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 14:46:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 14:46:09] Further information can be found at the LHC@home message board.
[2025-02-25 14:46:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 14:46:09] Checking for apptainer binary...
[2025-02-25 14:46:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 14:46:09] Running /usr/bin/apptainer --version
[2025-02-25 14:46:09] apptainer version 1.3.6-1.el9
[2025-02-25 14:46:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 14:46:09] c6-5-7-3.aglt2.org
[2025-02-25 14:46:09] apptainer works
[2025-02-25 14:46:09] Set ATHENA_PROC_NUMBER=9
[2025-02-25 14:46:09] Set ATHENA_CORE_NUMBER=9
[2025-02-25 14:46:09] Starting ATLAS job with PandaID=6530714820
[2025-02-25 14:46:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 16:20:34]  *** The last 200 lines of the pilot log: ***
[2025-02-25 16:20:34]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-25 16:20:34]  replicas=None
[2025-02-25 16:20:34]  scope=mc23_13p6TeV
[2025-02-25 16:20:34]  status=None
[2025-02-25 16:20:34]  status_code=0
[2025-02-25 16:20:34]  storage_token=
[2025-02-25 16:20:34]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6530714820/log.43401137._001743.job.log.tgz.1
[2025-02-25 16:20:34]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6a/66/log.43401137._001743.job.log.tgz.1
[2025-02-25 16:20:34]  workdir=None
[2025-02-25 16:20:34] ]
[2025-02-25 16:20:34] 2025-02-25 21:20:08,538 | INFO     | transferring file log.43401137._001743.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6530714820/log.43401137._001743.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-02-25 16:20:34] 2025-02-25 21:20:08,538 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6530714820/log.43401137._001743.job.log.tgz.1 /tmp/boinchome/slots/1/log.43401137._001743.job
[2025-02-25 16:20:34] 2025-02-25 21:20:08,559 | INFO     | adding to output.list: log.43401137._001743.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6a/66/log.43401137._001743.job.log.tg
[2025-02-25 16:20:34] 2025-02-25 21:20:08,560 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-25 16:20:34] 2025-02-25 21:20:08,560 | INFO     | summary of transferred files:
[2025-02-25 16:20:34] 2025-02-25 21:20:08,560 | INFO     |  -- lfn=log.43401137._001743.job.log.tgz.1, status_code=0, status=transferred
[2025-02-25 16:20:34] 2025-02-25 21:20:08,560 | INFO     | stage-out finished correctly
[2025-02-25 16:20:34] 2025-02-25 21:20:09,267 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-25 16:20:34] 2025-02-25 21:20:09,373 | INFO     | job 6530714820 has state=finished
[2025-02-25 16:20:34] 2025-02-25 21:20:09,374 | INFO     | preparing for final server update for job 6530714820 in state='finished'
[2025-02-25 16:20:34] 2025-02-25 21:20:09,458 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-02-25 16:20:34] 2025-02-25 21:20:09,458 | INFO     | this job has now completed (state=finished)
[2025-02-25 16:20:34] 2025-02-25 21:20:09,458 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-25 16:20:34] 2025-02-25 21:20:09,459 | INFO     | log transfer has been attempted: DONE
[2025-02-25 16:20:34] 2025-02-25 21:20:09,459 | INFO     | job 6530714820 has finished - writing final server update
[2025-02-25 16:20:34] 2025-02-25 21:20:09,459 | INFO     | total number of processed events: 400 (read)
[2025-02-25 16:20:34] 2025-02-25 21:20:09,475 | INFO     | executing command: lscpu
[2025-02-25 16:20:34] 2025-02-25 21:20:09,533 | INFO     | found 28 cores (14 cores per socket, 2 sockets)
[2025-02-25 16:20:34] 2025-02-25 21:20:09,555 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-25 16:20:34] 2025-02-25 21:20:13,709 | INFO     | CPU arch script returned: x86-64-v4
[2025-02-25 16:20:34] 2025-02-25 21:20:13,710 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6530714820/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 16:20:34] 2025-02-25 21:20:13,718 | INFO     | extracted standard info from prmon json
[2025-02-25 16:20:34] 2025-02-25 21:20:13,719 | INFO     | extracted standard memory fields from prmon json
[2025-02-25 16:20:34] 2025-02-25 21:20:13,719 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-25 16:20:34] 2025-02-25 21:20:13,720 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 16:20:34] 2025-02-25 21:20:13,720 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 16:20:34] 2025-02-25 21:20:13,723 | INFO     | fitting pss+swap vs Time
[2025-02-25 16:20:34] 2025-02-25 21:20:13,724 | INFO     | model: linear, x: [1740513110.0, 1740513171.0, 1740513232.0, 1740513293.0, 1740513354.0, 1740513415.0, 1740513476.0, 1740513537.0, 1740513598.0, 1740513659.0, 1740
[2025-02-25 16:20:34] 2025-02-25 21:20:13,724 | INFO     | sum of square deviations: 190403570.0
[2025-02-25 16:20:34] 2025-02-25 21:20:13,725 | INFO     | sum of deviations: 18660684277.000004
[2025-02-25 16:20:34] 2025-02-25 21:20:13,725 | INFO     | mean x: 1740515672.0
[2025-02-25 16:20:34] 2025-02-25 21:20:13,725 | INFO     | mean y: 2187974.3647058825
[2025-02-25 16:20:34] 2025-02-25 21:20:13,725 | INFO     | -- intersect: -170578717805.72385
[2025-02-25 16:20:34] 2025-02-25 21:20:13,725 | INFO     | intersect: -170578717805.72385
[2025-02-25 16:20:34] 2025-02-25 21:20:13,726 | INFO     | chi2: 1.7933482362698914
[2025-02-25 16:20:34] 2025-02-25 21:20:13,726 | INFO     | -- intersect: -170578717805.72385
[2025-02-25 16:20:34] 2025-02-25 21:20:13,726 | INFO     | current memory leak: 98.01 B/s (using 85 data points, chi2=1.79)
[2025-02-25 16:20:34] 2025-02-25 21:20:13,727 | INFO     | ..............................
[2025-02-25 16:20:34] 2025-02-25 21:20:13,727 | INFO     | . Timing measurements:
[2025-02-25 16:20:34] 2025-02-25 21:20:13,727 | INFO     | . get job = 0 s
[2025-02-25 16:20:34] 2025-02-25 21:20:13,727 | INFO     | . initial setup = 2 s
[2025-02-25 16:20:34] 2025-02-25 21:20:13,727 | INFO     | . payload setup = 5 s
[2025-02-25 16:20:34] 2025-02-25 21:20:13,727 | INFO     | . stage-in = 0 s
[2025-02-25 16:20:34] 2025-02-25 21:20:13,727 | INFO     | . payload execution = 5603 s
[2025-02-25 16:20:34] 2025-02-25 21:20:13,727 | INFO     | . stage-out = 0 s
[2025-02-25 16:20:34] 2025-02-25 21:20:13,727 | INFO     | . log creation = 0 s
[2025-02-25 16:20:34] 2025-02-25 21:20:13,728 | INFO     | ..............................
[2025-02-25 16:20:34] 2025-02-25 21:20:13,878 | INFO     | 
[2025-02-25 16:20:34] 2025-02-25 21:20:13,878 | INFO     | job summary report
[2025-02-25 16:20:34] 2025-02-25 21:20:13,878 | INFO     | --------------------------------------------------
[2025-02-25 16:20:34] 2025-02-25 21:20:13,878 | INFO     | PanDA job id: 6530714820
[2025-02-25 16:20:34] 2025-02-25 21:20:13,878 | INFO     | task id: 43401137
[2025-02-25 16:20:34] 2025-02-25 21:20:13,878 | INFO     | errors: (none)
[2025-02-25 16:20:34] 2025-02-25 21:20:13,878 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 16:20:34] 2025-02-25 21:20:13,878 | INFO     | pilot state: finished 
[2025-02-25 16:20:34] 2025-02-25 21:20:13,878 | INFO     | transexitcode: 0
[2025-02-25 16:20:34] 2025-02-25 21:20:13,879 | INFO     | exeerrorcode: 0
[2025-02-25 16:20:34] 2025-02-25 21:20:13,879 | INFO     | exeerrordiag: 
[2025-02-25 16:20:34] 2025-02-25 21:20:13,879 | INFO     | exitcode: 0
[2025-02-25 16:20:34] 2025-02-25 21:20:13,879 | INFO     | exitmsg: OK
[2025-02-25 16:20:34] 2025-02-25 21:20:13,879 | INFO     | cpuconsumptiontime: 38001 s
[2025-02-25 16:20:34] 2025-02-25 21:20:13,879 | INFO     | nevents: 400
[2025-02-25 16:20:34] 2025-02-25 21:20:13,879 | INFO     | neventsw: 0
[2025-02-25 16:20:34] 2025-02-25 21:20:13,879 | INFO     | pid: 1010739
[2025-02-25 16:20:34] 2025-02-25 21:20:13,879 | INFO     | pgrp: 1010739
[2025-02-25 16:20:34] 2025-02-25 21:20:13,879 | INFO     | corecount: 9
[2025-02-25 16:20:34] 2025-02-25 21:20:13,879 | INFO     | event service: False
[2025-02-25 16:20:34] 2025-02-25 21:20:13,879 | INFO     | sizes: {0: 2370400, 1: 2370400, 5: 2370634, 11: 2370690, 5611: 2397208, 5612: 2397207, 5614: 2406388, 5619: 2406502}
[2025-02-25 16:20:34] 2025-02-25 21:20:13,879 | INFO     | --------------------------------------------------
[2025-02-25 16:20:34] 2025-02-25 21:20:13,879 | INFO     | 
[2025-02-25 16:20:34] 2025-02-25 21:20:13,879 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-02-25 16:20:34] 2025-02-25 21:20:13,894 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 16:20:34] 2025-02-25 21:20:13,894 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 16:20:34] 2025-02-25 21:20:13,894 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 16:20:34] 2025-02-25 21:20:13,894 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 16:20:34] 2025-02-25 21:20:13,894 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 16:20:34] 2025-02-25 21:20:13,895 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 16:20:34] 2025-02-25 21:20:13,895 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 16:20:34] 2025-02-25 21:20:13,895 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 16:20:34] 2025-02-25 21:20:13,895 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 16:20:34] 2025-02-25 21:20:13,895 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 16:20:34] 2025-02-25 21:20:13,895 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 16:20:34] 2025-02-25 21:20:13,895 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 16:20:34] 2025-02-25 21:20:13,895 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 16:20:34] 2025-02-25 21:20:13,895 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 16:20:34] 2025-02-25 21:20:13,895 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 16:20:34] 2025-02-25 21:20:13,895 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 16:20:34] 2025-02-25 21:20:13,895 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 16:20:34] 2025-02-25 21:20:13,895 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 16:20:34] 2025-02-25 21:20:13,895 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 16:20:34] 2025-02-25 21:20:13,895 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 16:20:34] 2025-02-25 21:20:13,895 | INFO     | job 6530714820 has completed (purged errors)
[2025-02-25 16:20:34] 2025-02-25 21:20:13,895 | INFO     | overall cleanup function is called
[2025-02-25 16:20:34] 2025-02-25 21:20:13,937 | WARNING  | process 1010739 can no longer be monitored (due to stat problems) - aborting
[2025-02-25 16:20:34] 2025-02-25 21:20:14,178 | INFO     | using path: /tmp/boinchome/slots/1/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 16:20:34] 2025-02-25 21:20:14,178 | INFO     | using path: /tmp/boinchome/slots/1/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 16:20:34] 2025-02-25 21:20:14,179 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/1/PanDA_Pilot-6530714820/payload.stdout) since it has not been created yet
[2025-02-25 16:20:34] 2025-02-25 21:20:14,179 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-02-25 16:20:34] 2025-02-25 21:20:14,195 | INFO     | sufficient remaining disk space (73582772224 B)
[2025-02-25 16:20:34] 2025-02-25 21:20:14,195 | WARNING  | skipping size check of workdir since it has not been created yet
[2025-02-25 16:20:34] 2025-02-25 21:20:14,195 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/1/PanDA_Pilot-6530714820/HITS.43401137._001743.pool.root.1 since it does not exist
[2025-02-25 16:20:34] 2025-02-25 21:20:14,413 | INFO     | number of running child processes to parent process 1010739: 1
[2025-02-25 16:20:34] 2025-02-25 21:20:14,413 | INFO     | maximum number of monitored processes: 6
[2025-02-25 16:20:34] 2025-02-25 21:20:14,413 | INFO     | aborting job monitoring since job object (job id=6530714820) has expired
[2025-02-25 16:20:34] 2025-02-25 21:20:14,903 | INFO     | --- collectZombieJob: --- 10, [1010739]
[2025-02-25 16:20:34] 2025-02-25 21:20:14,903 | INFO     | zombie collector waiting for pid 1010739
[2025-02-25 16:20:34] 2025-02-25 21:20:14,903 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 16:20:34] 2025-02-25 21:20:14,903 | INFO     | collected zombie processes
[2025-02-25 16:20:34] 2025-02-25 21:20:14,904 | INFO     | will attempt to kill all subprocesses of pid=1010739
[2025-02-25 16:20:34] 2025-02-25 21:20:15,124 | INFO     | process IDs to be killed: [1010739] (in reverse order)
[2025-02-25 16:20:34] 2025-02-25 21:20:15,243 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 16:20:34] 2025-02-25 21:20:15,244 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 16:20:34] 2025-02-25 21:20:15,259 | INFO     | did not find any defunct processes belonging to 1010739
[2025-02-25 16:20:34] 2025-02-25 21:20:15,274 | INFO     | did not find any defunct processes belonging to 1010739
[2025-02-25 16:20:34] 2025-02-25 21:20:15,274 | INFO     | ready for new job
[2025-02-25 16:20:34] 2025-02-25 21:20:15,274 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 16:20:34] 2025-02-25 21:20:15,276 | INFO     | **************************************
[2025-02-25 16:20:34] 2025-02-25 21:20:15,276 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 16:20:34] 2025-02-25 21:20:15,276 | INFO     | **************************************
[2025-02-25 16:20:34] 2025-02-25 21:20:15,276 | INFO     | 
[2025-02-25 16:20:34] 2025-02-25 21:20:15,290 | INFO     | architecture information:
[2025-02-25 16:20:34] 2025-02-25 21:20:15,291 | INFO     | executing command: cat /etc/os-release
[2025-02-25 16:20:34] 2025-02-25 21:20:15,306 | INFO     | cat /etc/os-release:
[2025-02-25 16:20:34] NAME="CentOS Linux"
[2025-02-25 16:20:34] VERSION="7 (Core)"
[2025-02-25 16:20:34] ID="centos"
[2025-02-25 16:20:34] ID_LIKE="rhel fedora"
[2025-02-25 16:20:34] VERSION_ID="7"
[2025-02-25 16:20:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 16:20:34] ANSI_COLOR="0;31"
[2025-02-25 16:20:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 16:20:34] HOME_URL="https://www.centos.org/"
[2025-02-25 16:20:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 16:20:34] 
[2025-02-25 16:20:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 16:20:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 16:20:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 16:20:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 16:20:34] 
[2025-02-25 16:20:34] 2025-02-25 21:20:15,306 | INFO     | **************************************
[2025-02-25 16:20:34] 2025-02-25 21:20:15,809 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-02-25 16:20:34] 2025-02-25 21:20:15,827 | INFO     | sufficient remaining disk space (73583820800 B)
[2025-02-25 16:20:34] 2025-02-25 21:20:15,827 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 16:20:34] 2025-02-25 21:20:15,827 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 16:20:34] 2025-02-25 21:20:15,827 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 16:20:34] 2025-02-25 21:20:15,828 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 16:20:34] 2025-02-25 21:20:15,828 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-25 16:20:34] 2025-02-25 21:20:15,828 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 16:20:34] 2025-02-25 21:20:15,829 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 16:20:34] 2025-02-25 21:20:15,829 | INFO     | aborting loop
[2025-02-25 16:20:34] 2025-02-25 21:20:15,829 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 16:20:34] 2025-02-25 21:20:15,829 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 16:20:34] 2025-02-25 21:20:16,199 | INFO     | all data control threads have been joined
[2025-02-25 16:20:34] 2025-02-25 21:20:16,664 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 16:20:34] 2025-02-25 21:20:16,830 | INFO     | [job] job monitor thread has finished
[2025-02-25 16:20:34] 2025-02-25 21:20:16,833 | INFO     | [job] retrieve thread has finished
[2025-02-25 16:20:34] 2025-02-25 21:20:16,834 | INFO     | [job] queue monitor thread has finished
[2025-02-25 16:20:34] 2025-02-25 21:20:16,881 | INFO     | all payload control threads have been joined
[2025-02-25 16:20:34] 2025-02-25 21:20:17,156 | INFO     | all job control threads have been joined
[2025-02-25 16:20:34] 2025-02-25 21:20:17,205 | INFO     | [data] control thread has finished
[2025-02-25 16:20:34] 2025-02-25 21:20:17,280 | INFO     | [payload] validate_post thread has finished
[2025-02-25 16:20:34] 2025-02-25 21:20:17,595 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 16:20:34] 2025-02-25 21:20:17,595 | INFO     | [job] validate thread has finished
[2025-02-25 16:20:34] 2025-02-25 21:20:17,597 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 16:20:34] 2025-02-25 21:20:17,756 | INFO     | [payload] failed_post thread has finished
[2025-02-25 16:20:34] 2025-02-25 21:20:17,780 | INFO     | [data] copytool_in thread has finished
[2025-02-25 16:20:34] 2025-02-25 21:20:17,885 | INFO     | [payload] control thread has finished
[2025-02-25 16:20:34] 2025-02-25 21:20:18,103 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 16:20:34] 2025-02-25 21:20:18,162 | INFO     | [job] control thread has finished
[2025-02-25 16:20:34] 2025-02-25 21:20:18,669 | INFO     | [data] copytool_out thread has finished
[2025-02-25 16:20:34] 2025-02-25 21:20:19,835 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 16:20:34] 2025-02-25 21:20:26,116 | INFO     | job.realtimelogging is not enabled
[2025-02-25 16:20:34] 2025-02-25 21:20:27,119 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 16:20:34] 2025-02-25 21:20:28,778 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139717968820032)>', '<ExcThread(monitor, started 139717467158272)>']
[2025-02-25 16:20:34] 2025-02-25 21:20:28,893 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 16:20:34] 2025-02-25 21:20:28,893 | INFO     | [monitor] control thread has ended
[2025-02-25 16:20:34] 2025-02-25 21:20:33,806 | INFO     | all workflow threads have been joined
[2025-02-25 16:20:34] 2025-02-25 21:20:33,808 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 16:20:34] 2025-02-25 21:20:33,809 | INFO     | traces error code: 0
[2025-02-25 16:20:34] 2025-02-25 21:20:33,809 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 16:20:34] 2025-02-25 21:20:34,204 [wrapper] ==== pilot stdout END ====
[2025-02-25 16:20:34] 2025-02-25 21:20:34,207 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 16:20:34] 2025-02-25 21:20:34,210 [wrapper] pilotpid: 1003087
[2025-02-25 16:20:34] 2025-02-25 21:20:34,213 [wrapper] Pilot exit status: 0
[2025-02-25 16:20:34] 2025-02-25 21:20:34,226 [wrapper] pandaids: 6530714820
[2025-02-25 16:20:34] 2025-02-25 21:20:34,305 [wrapper] cleanup supervisor_pilot 1664656 1003088
[2025-02-25 16:20:34] 2025-02-25 21:20:34,308 [wrapper] Test setup, not cleaning
[2025-02-25 16:20:34] 2025-02-25 21:20:34,313 [wrapper] apfmon messages muted
[2025-02-25 16:20:34] 2025-02-25 21:20:34,316 [wrapper] ==== wrapper stdout END ====
[2025-02-25 16:20:34] 2025-02-25 21:20:34,319 [wrapper] ==== wrapper stderr END ====
[2025-02-25 16:20:34]  *** Error codes and diagnostics ***
[2025-02-25 16:20:34]     "exeErrorCode": 0,
[2025-02-25 16:20:34]     "exeErrorDiag": "",
[2025-02-25 16:20:34]     "pilotErrorCode": 0,
[2025-02-25 16:20:34]     "pilotErrorDiag": "",
[2025-02-25 16:20:34]  *** Listing of results directory ***
[2025-02-25 16:20:34] total 430348
[2025-02-25 16:20:34] -rw-r--r--. 1 boincer umatlas    491065 Feb 25 13:15 pilot3.tar.gz
[2025-02-25 16:20:34] -rw-r--r--. 1 boincer umatlas      5118 Feb 25 13:19 queuedata.json
[2025-02-25 16:20:34] -rwx------. 1 boincer umatlas     35865 Feb 25 13:19 runpilot2-wrapper.sh
[2025-02-25 16:20:34] -rw-r--r--. 1 boincer umatlas       100 Feb 25 14:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 16:20:34] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 25 14:46 run_atlas
[2025-02-25 16:20:34] -rw-r--r--. 1 boincer umatlas       105 Feb 25 14:46 job.xml
[2025-02-25 16:20:34] -rw-r--r--. 2 boincer umatlas 249739504 Feb 25 14:46 EVNT.43401135._000053.pool.root.1
[2025-02-25 16:20:34] -rw-r--r--. 2 boincer umatlas     17569 Feb 25 14:46 start_atlas.sh
[2025-02-25 16:20:34] drwxrwx--x. 2 boincer umatlas      4096 Feb 25 14:46 shared
[2025-02-25 16:20:34] -rw-r--r--. 2 boincer umatlas    503551 Feb 25 14:46 input.tar.gz
[2025-02-25 16:20:34] -rw-r--r--. 1 boincer umatlas         0 Feb 25 14:46 boinc_lockfile
[2025-02-25 16:20:34] -rw-r--r--. 1 boincer umatlas      2558 Feb 25 14:46 pandaJob.out
[2025-02-25 16:20:34] -rw-------. 1 boincer umatlas       467 Feb 25 14:46 setup.sh.local
[2025-02-25 16:20:34] -rw-------. 1 boincer umatlas    987482 Feb 25 14:46 agis_schedconf.cvmfs.json
[2025-02-25 16:20:34] -rw-------. 1 boincer umatlas   1573632 Feb 25 14:46 agis_ddmendpoints.agis.ALL.json
[2025-02-25 16:20:34] drwx------. 4 boincer umatlas      4096 Feb 25 14:46 pilot3
[2025-02-25 16:20:34] -rw-r--r--. 1 boincer umatlas      6840 Feb 25 16:12 init_data.xml
[2025-02-25 16:20:34] -rw-------. 1 boincer umatlas 185357010 Feb 25 16:19 HITS.43401137._001743.pool.root.1
[2025-02-25 16:20:34] -rw-r--r--. 1 boincer umatlas       530 Feb 25 16:19 boinc_task_state.xml
[2025-02-25 16:20:34] -rw-------. 1 boincer umatlas      1041 Feb 25 16:20 memory_monitor_summary.json
[2025-02-25 16:20:34] -rw-r--r--. 1 boincer umatlas        27 Feb 25 16:20 wrapper_checkpoint.txt
[2025-02-25 16:20:34] -rw-r--r--. 1 boincer umatlas      8192 Feb 25 16:20 boinc_mmap_file
[2025-02-25 16:20:34] -rw-------. 1 boincer umatlas        95 Feb 25 16:20 pilot_heartbeat.json
[2025-02-25 16:20:34] -rw-------. 1 boincer umatlas    347464 Feb 25 16:20 log.43401137._001743.job.log.tgz.1
[2025-02-25 16:20:34] -rw-------. 1 boincer umatlas      7734 Feb 25 16:20 heartbeat.json
[2025-02-25 16:20:34] -rw-------. 1 boincer umatlas      4410 Feb 25 16:20 pilotlog.txt
[2025-02-25 16:20:34] -rw-------. 1 boincer umatlas    544438 Feb 25 16:20 log.43401137._001743.job.log.1
[2025-02-25 16:20:34] -rw-------. 1 boincer umatlas       357 Feb 25 16:20 output.list
[2025-02-25 16:20:34] -rw-r--r--. 1 boincer umatlas       620 Feb 25 16:20 runtime_log
[2025-02-25 16:20:34] -rw-------. 1 boincer umatlas    911360 Feb 25 16:20 result.tar.gz
[2025-02-25 16:20:34] -rw-r--r--. 1 boincer umatlas     11418 Feb 25 16:20 runtime_log.err
[2025-02-25 16:20:34] -rw-------. 1 boincer umatlas       652 Feb 25 16:20 03nKDm7hE76n9Rq4apOajLDm4fhM0noT9bVoFjIUDm14fKDm6h7XIm.diag
[2025-02-25 16:20:34] -rw-r--r--. 1 boincer umatlas     22106 Feb 25 16:20 stderr.txt
[2025-02-25 16:20:34] HITS file was successfully produced:
[2025-02-25 16:20:34] -rw-------. 1 boincer umatlas 185357010 Feb 25 16:19 shared/HITS.pool.root.1
[2025-02-25 16:20:34]  *** Contents of shared directory: ***
[2025-02-25 16:20:34] total 426312
[2025-02-25 16:20:34] -rw-r--r--. 2 boincer umatlas 249739504 Feb 25 14:46 ATLAS.root_0
[2025-02-25 16:20:34] -rw-r--r--. 2 boincer umatlas     17569 Feb 25 14:46 start_atlas.sh
[2025-02-25 16:20:34] -rw-r--r--. 2 boincer umatlas    503551 Feb 25 14:46 input.tar.gz
[2025-02-25 16:20:34] -rw-------. 1 boincer umatlas 185357010 Feb 25 16:19 HITS.pool.root.1
[2025-02-25 16:20:34] -rw-------. 1 boincer umatlas    911360 Feb 25 16:20 result.tar.gz
16:20:36 (999324): run_atlas exited; CPU time 37952.202285
16:20:36 (999324): called boinc_finish(0)

</stderr_txt>
]]>

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