Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:37:58 (27235): wrapper (7.7.26015): starting
12:37:58 (27235): wrapper: running run_atlas (--nthreads 12)
[2025-02-25 12:37:58] Arguments: --nthreads 12
[2025-02-25 12:37:58] Threads: 12
[2025-02-25 12:37:58] Checking for CVMFS
[2025-02-25 12:37:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 12:37:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 12:37:59] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 12:37:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 12:37:59] 2.11.2.0 10995 118292 138420 143047 3 1 14361010 20275200 1 130560 0 24362520 99.985 7862209 40985 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-25 12:37:59] CVMFS is ok
[2025-02-25 12:37:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 12:37:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 12:37:59] Further information can be found at the LHC@home message board.
[2025-02-25 12:37:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 12:37:59] Checking for apptainer binary...
[2025-02-25 12:37:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 12:37:59] Running /usr/bin/apptainer --version
[2025-02-25 12:37:59] apptainer version 1.3.2-1.el7
[2025-02-25 12:37:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 12:38:00] c-205-22.aglt2.org
[2025-02-25 12:38:00] apptainer works
[2025-02-25 12:38:00] Set ATHENA_PROC_NUMBER=12
[2025-02-25 12:38:00] Set ATHENA_CORE_NUMBER=12
[2025-02-25 12:38:00] Starting ATLAS job with PandaID=6530650918
[2025-02-25 12:38:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 14:00:04]  *** The last 200 lines of the pilot log: ***
[2025-02-25 14:00:04]  guid=3a8ba92c-d097-4e37-9287-62ec7dc0a83b
[2025-02-25 14:00:04]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-02-25 14:00:04]  is_altstaged=None
[2025-02-25 14:00:04]  is_tar=False
[2025-02-25 14:00:04]  lfn=log.43401171._001248.job.log.tgz.1
[2025-02-25 14:00:04]  mtime=0
[2025-02-25 14:00:04]  protocol_id=None
[2025-02-25 14:00:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-25 14:00:04]  replicas=None
[2025-02-25 14:00:04]  scope=mc23_13p6TeV
[2025-02-25 14:00:04]  status=None
[2025-02-25 14:00:04]  status_code=0
[2025-02-25 14:00:04]  storage_token=
[2025-02-25 14:00:04]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6530650918/log.43401171._001248.job.log.tgz.1
[2025-02-25 14:00:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8b/23/log.43401171._001248.job.log.tgz.1
[2025-02-25 14:00:04]  workdir=None
[2025-02-25 14:00:04] ]
[2025-02-25 14:00:04] 2025-02-25 18:59:43,351 | INFO     | transferring file log.43401171._001248.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6530650918/log.43401171._001248.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-02-25 14:00:04] 2025-02-25 18:59:43,351 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6530650918/log.43401171._001248.job.log.tgz.1 /tmp/boinchome/slots/0/log.43401171._001248.job
[2025-02-25 14:00:04] 2025-02-25 18:59:43,374 | INFO     | adding to output.list: log.43401171._001248.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8b/23/log.43401171._001248.job.log.tg
[2025-02-25 14:00:04] 2025-02-25 18:59:43,375 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-25 14:00:04] 2025-02-25 18:59:43,376 | INFO     | summary of transferred files:
[2025-02-25 14:00:04] 2025-02-25 18:59:43,376 | INFO     |  -- lfn=log.43401171._001248.job.log.tgz.1, status_code=0, status=transferred
[2025-02-25 14:00:04] 2025-02-25 18:59:43,376 | INFO     | stage-out finished correctly
[2025-02-25 14:00:04] 2025-02-25 18:59:44,328 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-25 14:00:04] 2025-02-25 18:59:45,192 | INFO     | job 6530650918 has state=finished
[2025-02-25 14:00:04] 2025-02-25 18:59:45,192 | INFO     | preparing for final server update for job 6530650918 in state='finished'
[2025-02-25 14:00:04] 2025-02-25 18:59:45,253 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-02-25 14:00:04] 2025-02-25 18:59:45,253 | INFO     | this job has now completed (state=finished)
[2025-02-25 14:00:04] 2025-02-25 18:59:45,253 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-25 14:00:04] 2025-02-25 18:59:45,253 | INFO     | log transfer has been attempted: DONE
[2025-02-25 14:00:04] 2025-02-25 18:59:45,253 | INFO     | job 6530650918 has finished - writing final server update
[2025-02-25 14:00:04] 2025-02-25 18:59:45,254 | INFO     | total number of processed events: 400 (read)
[2025-02-25 14:00:04] 2025-02-25 18:59:45,255 | INFO     | executing command: lscpu
[2025-02-25 14:00:04] 2025-02-25 18:59:45,281 | INFO     | found 12 cores (6 cores per socket, 2 sockets)
[2025-02-25 14:00:04] 2025-02-25 18:59:45,296 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-25 14:00:04] 2025-02-25 18:59:50,252 | INFO     | CPU arch script returned: x86-64-v2
[2025-02-25 14:00:04] 2025-02-25 18:59:50,252 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6530650918/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 14:00:04] 2025-02-25 18:59:50,254 | INFO     | extracted standard info from prmon json
[2025-02-25 14:00:04] 2025-02-25 18:59:50,254 | INFO     | extracted standard memory fields from prmon json
[2025-02-25 14:00:04] 2025-02-25 18:59:50,258 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-25 14:00:04] 2025-02-25 18:59:50,259 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 14:00:04] 2025-02-25 18:59:50,259 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 14:00:04] 2025-02-25 18:59:50,262 | INFO     | fitting pss+swap vs Time
[2025-02-25 14:00:04] 2025-02-25 18:59:50,262 | INFO     | model: linear, x: [1740505430.0, 1740505491.0, 1740505552.0, 1740505613.0, 1740505674.0, 1740505735.0, 1740505796.0, 1740505857.0, 1740505918.0, 1740505979.0, 1740
[2025-02-25 14:00:04] 2025-02-25 18:59:50,263 | INFO     | sum of square deviations: 120605052.0
[2025-02-25 14:00:04] 2025-02-25 18:59:50,263 | INFO     | sum of deviations: 18393180550.0
[2025-02-25 14:00:04] 2025-02-25 18:59:50,263 | INFO     | mean x: 1740507626.0
[2025-02-25 14:00:04] 2025-02-25 18:59:50,264 | INFO     | mean y: 2611277.904109589
[2025-02-25 14:00:04] 2025-02-25 18:59:50,264 | INFO     | -- intersect: -265437936052.3178
[2025-02-25 14:00:04] 2025-02-25 18:59:50,264 | INFO     | intersect: -265437936052.3178
[2025-02-25 14:00:04] 2025-02-25 18:59:50,264 | INFO     | chi2: 2.2880643533217846
[2025-02-25 14:00:04] 2025-02-25 18:59:50,264 | INFO     | -- intersect: -265437936052.3178
[2025-02-25 14:00:04] 2025-02-25 18:59:50,265 | INFO     | current memory leak: 152.51 B/s (using 73 data points, chi2=2.29)
[2025-02-25 14:00:04] 2025-02-25 18:59:50,265 | INFO     | ..............................
[2025-02-25 14:00:04] 2025-02-25 18:59:50,265 | INFO     | . Timing measurements:
[2025-02-25 14:00:04] 2025-02-25 18:59:50,265 | INFO     | . get job = 0 s
[2025-02-25 14:00:04] 2025-02-25 18:59:50,265 | INFO     | . initial setup = 2 s
[2025-02-25 14:00:04] 2025-02-25 18:59:50,266 | INFO     | . payload setup = 8 s
[2025-02-25 14:00:04] 2025-02-25 18:59:50,266 | INFO     | . stage-in = 0 s
[2025-02-25 14:00:04] 2025-02-25 18:59:50,266 | INFO     | . payload execution = 4858 s
[2025-02-25 14:00:04] 2025-02-25 18:59:50,266 | INFO     | . stage-out = 0 s
[2025-02-25 14:00:04] 2025-02-25 18:59:50,266 | INFO     | . log creation = 0 s
[2025-02-25 14:00:04] 2025-02-25 18:59:50,266 | INFO     | ..............................
[2025-02-25 14:00:04] 2025-02-25 18:59:50,328 | WARNING  | process 5859 can no longer be monitored (due to stat problems) - aborting
[2025-02-25 14:00:04] 2025-02-25 18:59:50,334 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6530650918/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 14:00:04] 2025-02-25 18:59:50,365 | INFO     | 
[2025-02-25 14:00:04] 2025-02-25 18:59:50,366 | INFO     | job summary report
[2025-02-25 14:00:04] 2025-02-25 18:59:50,366 | INFO     | --------------------------------------------------
[2025-02-25 14:00:04] 2025-02-25 18:59:50,366 | INFO     | PanDA job id: 6530650918
[2025-02-25 14:00:04] 2025-02-25 18:59:50,366 | INFO     | task id: 43401171
[2025-02-25 14:00:04] 2025-02-25 18:59:50,366 | INFO     | errors: (none)
[2025-02-25 14:00:04] 2025-02-25 18:59:50,366 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 14:00:04] 2025-02-25 18:59:50,366 | INFO     | pilot state: finished 
[2025-02-25 14:00:04] 2025-02-25 18:59:50,367 | INFO     | transexitcode: 0
[2025-02-25 14:00:04] 2025-02-25 18:59:50,367 | INFO     | exeerrorcode: 0
[2025-02-25 14:00:04] 2025-02-25 18:59:50,367 | INFO     | exeerrordiag: 
[2025-02-25 14:00:04] 2025-02-25 18:59:50,367 | INFO     | exitcode: 0
[2025-02-25 14:00:04] 2025-02-25 18:59:50,367 | INFO     | exitmsg: OK
[2025-02-25 14:00:04] 2025-02-25 18:59:50,367 | INFO     | cpuconsumptiontime: 45114 s
[2025-02-25 14:00:04] 2025-02-25 18:59:50,367 | INFO     | nevents: 400
[2025-02-25 14:00:04] 2025-02-25 18:59:50,367 | INFO     | neventsw: 0
[2025-02-25 14:00:04] 2025-02-25 18:59:50,367 | INFO     | pid: 5859
[2025-02-25 14:00:04] 2025-02-25 18:59:50,368 | INFO     | pgrp: 5859
[2025-02-25 14:00:04] 2025-02-25 18:59:50,368 | INFO     | corecount: 12
[2025-02-25 14:00:04] 2025-02-25 18:59:50,368 | INFO     | event service: False
[2025-02-25 14:00:04] 2025-02-25 18:59:50,368 | INFO     | sizes: {0: 2376662, 1: 2376917, 6: 2377123, 12: 2377151, 4871: 2403207, 4873: 2412148, 4874: 2412332, 4879: 2412502}
[2025-02-25 14:00:04] 2025-02-25 18:59:50,368 | INFO     | --------------------------------------------------
[2025-02-25 14:00:04] 2025-02-25 18:59:50,368 | INFO     | 
[2025-02-25 14:00:04] 2025-02-25 18:59:50,368 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-25 14:00:04] 2025-02-25 18:59:50,389 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 14:00:04] 2025-02-25 18:59:50,390 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 14:00:04] 2025-02-25 18:59:50,390 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 14:00:04] 2025-02-25 18:59:50,390 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 14:00:04] 2025-02-25 18:59:50,390 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 14:00:04] 2025-02-25 18:59:50,390 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 14:00:04] 2025-02-25 18:59:50,390 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 14:00:04] 2025-02-25 18:59:50,390 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 14:00:04] 2025-02-25 18:59:50,391 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 14:00:04] 2025-02-25 18:59:50,391 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 14:00:04] 2025-02-25 18:59:50,391 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 14:00:04] 2025-02-25 18:59:50,391 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 14:00:04] 2025-02-25 18:59:50,391 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 14:00:04] 2025-02-25 18:59:50,392 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 14:00:04] 2025-02-25 18:59:50,392 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 14:00:04] 2025-02-25 18:59:50,395 | INFO     | number of running child processes to parent process 5859: 1
[2025-02-25 14:00:04] 2025-02-25 18:59:50,395 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 14:00:04] 2025-02-25 18:59:50,396 | INFO     | maximum number of monitored processes: 6
[2025-02-25 14:00:04] 2025-02-25 18:59:50,396 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 14:00:04] 2025-02-25 18:59:50,396 | INFO     | aborting job monitoring since job object (job id=6530650918) has expired
[2025-02-25 14:00:04] 2025-02-25 18:59:50,396 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 14:00:04] 2025-02-25 18:59:50,397 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 14:00:04] 2025-02-25 18:59:50,397 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 14:00:04] 2025-02-25 18:59:50,397 | INFO     | job 6530650918 has completed (purged errors)
[2025-02-25 14:00:04] 2025-02-25 18:59:50,397 | INFO     | overall cleanup function is called
[2025-02-25 14:00:04] 2025-02-25 18:59:51,405 | INFO     | --- collectZombieJob: --- 10, [5859]
[2025-02-25 14:00:04] 2025-02-25 18:59:51,405 | INFO     | zombie collector waiting for pid 5859
[2025-02-25 14:00:04] 2025-02-25 18:59:51,405 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 14:00:04] 2025-02-25 18:59:51,406 | INFO     | collected zombie processes
[2025-02-25 14:00:04] 2025-02-25 18:59:51,406 | INFO     | will attempt to kill all subprocesses of pid=5859
[2025-02-25 14:00:04] 2025-02-25 18:59:51,477 | INFO     | process IDs to be killed: [5859] (in reverse order)
[2025-02-25 14:00:04] 2025-02-25 18:59:51,527 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 14:00:04] 2025-02-25 18:59:51,528 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 14:00:04] 2025-02-25 18:59:51,532 | INFO     | did not find any defunct processes belonging to 5859
[2025-02-25 14:00:04] 2025-02-25 18:59:51,535 | INFO     | did not find any defunct processes belonging to 5859
[2025-02-25 14:00:04] 2025-02-25 18:59:51,535 | INFO     | ready for new job
[2025-02-25 14:00:04] 2025-02-25 18:59:51,535 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 14:00:04] 2025-02-25 18:59:51,536 | INFO     | **************************************
[2025-02-25 14:00:04] 2025-02-25 18:59:51,537 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 14:00:04] 2025-02-25 18:59:51,537 | INFO     | **************************************
[2025-02-25 14:00:04] 2025-02-25 18:59:51,537 | INFO     | 
[2025-02-25 14:00:04] 2025-02-25 18:59:51,537 | INFO     | architecture information:
[2025-02-25 14:00:04] 2025-02-25 18:59:51,538 | INFO     | executing command: cat /etc/os-release
[2025-02-25 14:00:04] 2025-02-25 18:59:51,553 | INFO     | cat /etc/os-release:
[2025-02-25 14:00:04] NAME="CentOS Linux"
[2025-02-25 14:00:04] VERSION="7 (Core)"
[2025-02-25 14:00:04] ID="centos"
[2025-02-25 14:00:04] ID_LIKE="rhel fedora"
[2025-02-25 14:00:04] VERSION_ID="7"
[2025-02-25 14:00:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 14:00:04] ANSI_COLOR="0;31"
[2025-02-25 14:00:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 14:00:04] HOME_URL="https://www.centos.org/"
[2025-02-25 14:00:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 14:00:04] 
[2025-02-25 14:00:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 14:00:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 14:00:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 14:00:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 14:00:04] 
[2025-02-25 14:00:04] 2025-02-25 18:59:51,554 | INFO     | **************************************
[2025-02-25 14:00:04] 2025-02-25 18:59:52,057 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-25 14:00:04] 2025-02-25 18:59:52,075 | INFO     | sufficient remaining disk space (29368516608 B)
[2025-02-25 14:00:04] 2025-02-25 18:59:52,076 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 14:00:04] 2025-02-25 18:59:52,076 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 14:00:04] 2025-02-25 18:59:52,076 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 14:00:04] 2025-02-25 18:59:52,076 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 14:00:04] 2025-02-25 18:59:52,077 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-25 14:00:04] 2025-02-25 18:59:52,077 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 14:00:04] 2025-02-25 18:59:52,077 | INFO     | aborting loop
[2025-02-25 14:00:04] 2025-02-25 18:59:52,078 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 14:00:04] 2025-02-25 18:59:52,078 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 14:00:04] 2025-02-25 18:59:52,078 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 14:00:04] 2025-02-25 18:59:52,131 | INFO     | all job control threads have been joined
[2025-02-25 14:00:04] 2025-02-25 18:59:52,144 | INFO     | all data control threads have been joined
[2025-02-25 14:00:04] 2025-02-25 18:59:52,529 | INFO     | all payload control threads have been joined
[2025-02-25 14:00:04] 2025-02-25 18:59:53,078 | INFO     | [job] retrieve thread has finished
[2025-02-25 14:00:04] 2025-02-25 18:59:53,083 | INFO     | [job] queue monitor thread has finished
[2025-02-25 14:00:04] 2025-02-25 18:59:53,084 | INFO     | [job] job monitor thread has finished
[2025-02-25 14:00:04] 2025-02-25 18:59:53,137 | INFO     | [job] control thread has finished
[2025-02-25 14:00:04] 2025-02-25 18:59:53,149 | INFO     | [data] control thread has finished
[2025-02-25 14:00:04] 2025-02-25 18:59:53,534 | INFO     | [payload] control thread has finished
[2025-02-25 14:00:04] 2025-02-25 18:59:53,537 | INFO     | [job] validate thread has finished
[2025-02-25 14:00:04] 2025-02-25 18:59:53,716 | INFO     | [payload] validate_post thread has finished
[2025-02-25 14:00:04] 2025-02-25 18:59:53,917 | INFO     | [payload] failed_post thread has finished
[2025-02-25 14:00:04] 2025-02-25 18:59:53,985 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 14:00:04] 2025-02-25 18:59:54,070 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 14:00:04] 2025-02-25 18:59:54,079 | INFO     | [data] copytool_out thread has finished
[2025-02-25 14:00:04] 2025-02-25 18:59:54,482 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 14:00:04] 2025-02-25 18:59:54,518 | INFO     | [data] copytool_in thread has finished
[2025-02-25 14:00:04] 2025-02-25 18:59:54,576 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 14:00:04] 2025-02-25 18:59:54,917 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 14:00:04] 2025-02-25 18:59:58,922 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 14:00:04] 2025-02-25 18:59:59,574 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140231505180480)>', '<ExcThread(monitor, started 140230900291328)>']
[2025-02-25 14:00:04] 2025-02-25 19:00:00,115 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 14:00:04] 2025-02-25 19:00:00,115 | INFO     | [monitor] control thread has ended
[2025-02-25 14:00:04] 2025-02-25 19:00:04,599 | INFO     | all workflow threads have been joined
[2025-02-25 14:00:04] 2025-02-25 19:00:04,600 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 14:00:04] 2025-02-25 19:00:04,600 | INFO     | traces error code: 0
[2025-02-25 14:00:04] 2025-02-25 19:00:04,600 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 14:00:04] 2025-02-25 19:00:04,686 [wrapper] ==== pilot stdout END ====
[2025-02-25 14:00:04] 2025-02-25 19:00:04,689 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 14:00:04] 2025-02-25 19:00:04,693 [wrapper] pilotpid: 31772
[2025-02-25 14:00:04] 2025-02-25 19:00:04,697 [wrapper] Pilot exit status: 0
[2025-02-25 14:00:04] 2025-02-25 19:00:04,713 [wrapper] pandaids: 6530650918
[2025-02-25 14:00:04] 2025-02-25 19:00:04,751 [wrapper] cleanup supervisor_pilot 29204 31773
[2025-02-25 14:00:04] 2025-02-25 19:00:04,755 [wrapper] Test setup, not cleaning
[2025-02-25 14:00:04] 2025-02-25 19:00:04,763 [wrapper] apfmon messages muted
[2025-02-25 14:00:04] 2025-02-25 19:00:04,767 [wrapper] ==== wrapper stdout END ====
[2025-02-25 14:00:04] 2025-02-25 19:00:04,771 [wrapper] ==== wrapper stderr END ====
[2025-02-25 14:00:04]  *** Error codes and diagnostics ***
[2025-02-25 14:00:04]     "exeErrorCode": 0,
[2025-02-25 14:00:04]     "exeErrorDiag": "",
[2025-02-25 14:00:04]     "pilotErrorCode": 0,
[2025-02-25 14:00:04]     "pilotErrorDiag": "",
[2025-02-25 14:00:04]  *** Listing of results directory ***
[2025-02-25 14:00:04] total 424156
[2025-02-25 14:00:04] -rw-r--r-- 1 boincer umatlas    491065 Feb 25 11:59 pilot3.tar.gz
[2025-02-25 14:00:04] -rw-r--r-- 1 boincer umatlas      5118 Feb 25 12:26 queuedata.json
[2025-02-25 14:00:04] -rwx------ 1 boincer umatlas     35865 Feb 25 12:29 runpilot2-wrapper.sh
[2025-02-25 14:00:04] -rw-r--r-- 1 boincer umatlas       100 Feb 25 12:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 14:00:04] -rwxr-xr-x 1 boincer umatlas      7986 Feb 25 12:37 run_atlas
[2025-02-25 14:00:04] -rw-r--r-- 1 boincer umatlas       105 Feb 25 12:37 job.xml
[2025-02-25 14:00:04] -rw-r--r-- 2 boincer umatlas 249455598 Feb 25 12:37 EVNT.43401169._000015.pool.root.1
[2025-02-25 14:00:04] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 12:37 start_atlas.sh
[2025-02-25 14:00:04] drwxrwx--x 2 boincer umatlas      4096 Feb 25 12:37 shared
[2025-02-25 14:00:04] -rw-r--r-- 2 boincer umatlas    503556 Feb 25 12:37 input.tar.gz
[2025-02-25 14:00:04] -rw-r--r-- 1 boincer umatlas         0 Feb 25 12:37 boinc_lockfile
[2025-02-25 14:00:04] -rw-r--r-- 1 boincer umatlas      2539 Feb 25 12:38 pandaJob.out
[2025-02-25 14:00:04] -rw------- 1 boincer umatlas       424 Feb 25 12:38 setup.sh.local
[2025-02-25 14:00:04] -rw------- 1 boincer umatlas    988274 Feb 25 12:38 agis_schedconf.cvmfs.json
[2025-02-25 14:00:04] -rw------- 1 boincer umatlas   1577983 Feb 25 12:38 agis_ddmendpoints.agis.ALL.json
[2025-02-25 14:00:04] drwx------ 4 boincer umatlas      4096 Feb 25 12:38 pilot3
[2025-02-25 14:00:04] -rw-r--r-- 1 boincer umatlas      5869 Feb 25 13:55 init_data.xml
[2025-02-25 14:00:04] -rw------- 1 boincer umatlas 179450817 Feb 25 13:59 HITS.43401171._001248.pool.root.1
[2025-02-25 14:00:04] -rw------- 1 boincer umatlas        95 Feb 25 13:59 pilot_heartbeat.json
[2025-02-25 14:00:04] -rw-r--r-- 1 boincer umatlas       529 Feb 25 13:59 boinc_task_state.xml
[2025-02-25 14:00:04] -rw------- 1 boincer umatlas      1052 Feb 25 13:59 memory_monitor_summary.json
[2025-02-25 14:00:04] -rw------- 1 boincer umatlas    353624 Feb 25 13:59 log.43401171._001248.job.log.tgz.1
[2025-02-25 14:00:04] -rw------- 1 boincer umatlas      7766 Feb 25 13:59 heartbeat.json
[2025-02-25 14:00:04] -rw-r--r-- 1 boincer umatlas        27 Feb 25 13:59 wrapper_checkpoint.txt
[2025-02-25 14:00:04] -rw-r--r-- 1 boincer umatlas      8192 Feb 25 13:59 boinc_mmap_file
[2025-02-25 14:00:04] -rw------- 1 boincer umatlas      4338 Feb 25 14:00 pilotlog.txt
[2025-02-25 14:00:04] -rw------- 1 boincer umatlas    458963 Feb 25 14:00 log.43401171._001248.job.log.1
[2025-02-25 14:00:04] -rw------- 1 boincer umatlas       357 Feb 25 14:00 output.list
[2025-02-25 14:00:04] -rw-r--r-- 1 boincer umatlas       620 Feb 25 14:00 runtime_log
[2025-02-25 14:00:04] -rw------- 1 boincer umatlas    829440 Feb 25 14:00 result.tar.gz
[2025-02-25 14:00:04] -rw-r--r-- 1 boincer umatlas     11015 Feb 25 14:00 runtime_log.err
[2025-02-25 14:00:04] -rw------- 1 boincer umatlas       658 Feb 25 14:00 6SMLDmlvD76nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmWvwKDmmnVkbm.diag
[2025-02-25 14:00:04] -rw-r--r-- 1 boincer umatlas     21450 Feb 25 14:00 stderr.txt
[2025-02-25 14:00:04] HITS file was successfully produced:
[2025-02-25 14:00:04] -rw------- 1 boincer umatlas 179450817 Feb 25 13:59 shared/HITS.pool.root.1
[2025-02-25 14:00:04]  *** Contents of shared directory: ***
[2025-02-25 14:00:04] total 420188
[2025-02-25 14:00:04] -rw-r--r-- 2 boincer umatlas 249455598 Feb 25 12:37 ATLAS.root_0
[2025-02-25 14:00:04] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 12:37 start_atlas.sh
[2025-02-25 14:00:04] -rw-r--r-- 2 boincer umatlas    503556 Feb 25 12:37 input.tar.gz
[2025-02-25 14:00:04] -rw------- 1 boincer umatlas 179450817 Feb 25 13:59 HITS.pool.root.1
[2025-02-25 14:00:04] -rw------- 1 boincer umatlas    829440 Feb 25 14:00 result.tar.gz
14:00:06 (27235): run_atlas exited; CPU time 45037.409917
14:00:06 (27235): called boinc_finish(0)

</stderr_txt>
]]>

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