Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:21:52 (13277): wrapper (7.7.26015): starting
12:21:52 (13277): wrapper: running run_atlas (--nthreads 12)
[2025-02-25 12:21:52] Arguments: --nthreads 12
[2025-02-25 12:21:52] Threads: 12
[2025-02-25 12:21:52] Checking for CVMFS
[2025-02-25 12:21:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 12:21:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 12:21:52] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 12:21:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 12:21:52] 2.11.2.0 2980 218641 195484 143046 1 55 11488119 20275201 1 130560 0 23881271 99.991 6537696 39579 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-25 12:21:52] CVMFS is ok
[2025-02-25 12:21:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 12:21:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 12:21:52] Further information can be found at the LHC@home message board.
[2025-02-25 12:21:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 12:21:52] Checking for apptainer binary...
[2025-02-25 12:21:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 12:21:52] Running /usr/bin/apptainer --version
[2025-02-25 12:21:52] apptainer version 1.3.2-1.el7
[2025-02-25 12:21:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 12:21:54] c-205-10.aglt2.org
[2025-02-25 12:21:54] apptainer works
[2025-02-25 12:21:54] Set ATHENA_PROC_NUMBER=12
[2025-02-25 12:21:54] Set ATHENA_CORE_NUMBER=12
[2025-02-25 12:21:54] Starting ATLAS job with PandaID=6530435820
[2025-02-25 12:21:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 13:44:57]  *** The last 200 lines of the pilot log: ***
[2025-02-25 13:44:57]  is_tar=False
[2025-02-25 13:44:57]  lfn=log.43401163._001085.job.log.tgz.1
[2025-02-25 13:44:57]  mtime=0
[2025-02-25 13:44:57]  protocol_id=None
[2025-02-25 13:44:57]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-25 13:44:57]  replicas=None
[2025-02-25 13:44:57]  scope=mc23_13p6TeV
[2025-02-25 13:44:57]  status=None
[2025-02-25 13:44:57]  status_code=0
[2025-02-25 13:44:57]  storage_token=
[2025-02-25 13:44:57]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6530435820/log.43401163._001085.job.log.tgz.1
[2025-02-25 13:44:57]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/69/cb/log.43401163._001085.job.log.tgz.1
[2025-02-25 13:44:57]  workdir=None
[2025-02-25 13:44:57] ]
[2025-02-25 13:44:57] 2025-02-25 18:44:30,640 | INFO     | transferring file log.43401163._001085.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6530435820/log.43401163._001085.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-02-25 13:44:57] 2025-02-25 18:44:30,640 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6530435820/log.43401163._001085.job.log.tgz.1 /tmp/boinchome/slots/0/log.43401163._001085.job
[2025-02-25 13:44:57] 2025-02-25 18:44:30,663 | INFO     | adding to output.list: log.43401163._001085.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/69/cb/log.43401163._001085.job.log.tg
[2025-02-25 13:44:57] 2025-02-25 18:44:30,664 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-25 13:44:57] 2025-02-25 18:44:30,664 | INFO     | summary of transferred files:
[2025-02-25 13:44:57] 2025-02-25 18:44:30,664 | INFO     |  -- lfn=log.43401163._001085.job.log.tgz.1, status_code=0, status=transferred
[2025-02-25 13:44:57] 2025-02-25 18:44:30,665 | INFO     | stage-out finished correctly
[2025-02-25 13:44:57] 2025-02-25 18:44:30,835 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-25 13:44:57] 2025-02-25 18:44:32,375 | INFO     | PID=16956 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-02-25 13:44:57] 2025-02-25 18:44:33,475 | INFO     | job 6530435820 has state=finished
[2025-02-25 13:44:57] 2025-02-25 18:44:33,476 | INFO     | preparing for final server update for job 6530435820 in state='finished'
[2025-02-25 13:44:57] 2025-02-25 18:44:33,476 | INFO     | this job has now completed (state=finished)
[2025-02-25 13:44:57] 2025-02-25 18:44:33,476 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-25 13:44:57] 2025-02-25 18:44:33,477 | INFO     | log transfer has been attempted: DONE
[2025-02-25 13:44:57] 2025-02-25 18:44:33,477 | INFO     | job 6530435820 has finished - writing final server update
[2025-02-25 13:44:57] 2025-02-25 18:44:33,477 | INFO     | total number of processed events: 400 (read)
[2025-02-25 13:44:57] 2025-02-25 18:44:33,479 | INFO     | executing command: lscpu
[2025-02-25 13:44:57] 2025-02-25 18:44:33,504 | INFO     | found 12 cores (6 cores per socket, 2 sockets)
[2025-02-25 13:44:57] 2025-02-25 18:44:33,519 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-25 13:44:57] 2025-02-25 18:44:38,524 | INFO     | CPU arch script returned: x86-64-v2
[2025-02-25 13:44:57] 2025-02-25 18:44:38,586 | WARNING  | process 23326 can no longer be monitored (due to stat problems) - aborting
[2025-02-25 13:44:57] 2025-02-25 18:44:38,641 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6530435820/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 13:44:57] 2025-02-25 18:44:38,641 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6530435820/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 13:44:57] 2025-02-25 18:44:38,643 | INFO     | extracted standard info from prmon json
[2025-02-25 13:44:57] 2025-02-25 18:44:38,643 | INFO     | extracted standard memory fields from prmon json
[2025-02-25 13:44:57] 2025-02-25 18:44:38,643 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-25 13:44:57] 2025-02-25 18:44:38,643 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 13:44:57] 2025-02-25 18:44:38,643 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 13:44:57] 2025-02-25 18:44:38,646 | INFO     | fitting pss+swap vs Time
[2025-02-25 13:44:57] 2025-02-25 18:44:38,646 | INFO     | model: linear, x: [1740504461.0, 1740504522.0, 1740504583.0, 1740504644.0, 1740504705.0, 1740504766.0, 1740504827.0, 1740504888.0, 1740504949.0, 1740505010.0, 1740
[2025-02-25 13:44:57] 2025-02-25 18:44:38,646 | INFO     | sum of square deviations: 125630262.5
[2025-02-25 13:44:57] 2025-02-25 18:44:38,647 | INFO     | sum of deviations: 23831759776.5
[2025-02-25 13:44:57] 2025-02-25 18:44:38,647 | INFO     | mean x: 1740506687.5
[2025-02-25 13:44:57] 2025-02-25 18:44:38,647 | INFO     | mean y: 2595793.8243243243
[2025-02-25 13:44:57] 2025-02-25 18:44:38,650 | INFO     | -- intersect: -330167352437.3334
[2025-02-25 13:44:57] 2025-02-25 18:44:38,650 | INFO     | intersect: -330167352437.3334
[2025-02-25 13:44:57] 2025-02-25 18:44:38,651 | INFO     | chi2: 1.9234305963582548
[2025-02-25 13:44:57] 2025-02-25 18:44:38,651 | INFO     | -- intersect: -330167352437.3334
[2025-02-25 13:44:57] 2025-02-25 18:44:38,651 | INFO     | current memory leak: 189.70 B/s (using 74 data points, chi2=1.92)
[2025-02-25 13:44:57] 2025-02-25 18:44:38,652 | INFO     | ..............................
[2025-02-25 13:44:57] 2025-02-25 18:44:38,652 | INFO     | . Timing measurements:
[2025-02-25 13:44:57] 2025-02-25 18:44:38,653 | INFO     | . get job = 0 s
[2025-02-25 13:44:57] 2025-02-25 18:44:38,653 | INFO     | . initial setup = 2 s
[2025-02-25 13:44:57] 2025-02-25 18:44:38,653 | INFO     | . payload setup = 7 s
[2025-02-25 13:44:57] 2025-02-25 18:44:38,653 | INFO     | . stage-in = 0 s
[2025-02-25 13:44:57] 2025-02-25 18:44:38,653 | INFO     | . payload execution = 4914 s
[2025-02-25 13:44:57] 2025-02-25 18:44:38,653 | INFO     | . stage-out = 0 s
[2025-02-25 13:44:57] 2025-02-25 18:44:38,653 | INFO     | . log creation = 0 s
[2025-02-25 13:44:57] 2025-02-25 18:44:38,653 | INFO     | ..............................
[2025-02-25 13:44:57] 2025-02-25 18:44:38,719 | INFO     | number of running child processes to parent process 23326: 1
[2025-02-25 13:44:57] 2025-02-25 18:44:38,729 | INFO     | maximum number of monitored processes: 6
[2025-02-25 13:44:57] 2025-02-25 18:44:38,735 | INFO     | aborting job monitoring since job object (job id=6530435820) has expired
[2025-02-25 13:44:57] 2025-02-25 18:44:39,052 | INFO     | 
[2025-02-25 13:44:57] 2025-02-25 18:44:39,053 | INFO     | job summary report
[2025-02-25 13:44:57] 2025-02-25 18:44:39,053 | INFO     | --------------------------------------------------
[2025-02-25 13:44:57] 2025-02-25 18:44:39,053 | INFO     | PanDA job id: 6530435820
[2025-02-25 13:44:57] 2025-02-25 18:44:39,053 | INFO     | task id: 43401163
[2025-02-25 13:44:57] 2025-02-25 18:44:39,053 | INFO     | errors: (none)
[2025-02-25 13:44:57] 2025-02-25 18:44:39,053 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 13:44:57] 2025-02-25 18:44:39,054 | INFO     | pilot state: finished 
[2025-02-25 13:44:57] 2025-02-25 18:44:39,054 | INFO     | transexitcode: 0
[2025-02-25 13:44:57] 2025-02-25 18:44:39,054 | INFO     | exeerrorcode: 0
[2025-02-25 13:44:57] 2025-02-25 18:44:39,054 | INFO     | exeerrordiag: 
[2025-02-25 13:44:57] 2025-02-25 18:44:39,054 | INFO     | exitcode: 0
[2025-02-25 13:44:57] 2025-02-25 18:44:39,054 | INFO     | exitmsg: OK
[2025-02-25 13:44:57] 2025-02-25 18:44:39,055 | INFO     | cpuconsumptiontime: 46928 s
[2025-02-25 13:44:57] 2025-02-25 18:44:39,055 | INFO     | nevents: 400
[2025-02-25 13:44:57] 2025-02-25 18:44:39,055 | INFO     | neventsw: 0
[2025-02-25 13:44:57] 2025-02-25 18:44:39,055 | INFO     | pid: 23326
[2025-02-25 13:44:57] 2025-02-25 18:44:39,055 | INFO     | pgrp: 23326
[2025-02-25 13:44:57] 2025-02-25 18:44:39,055 | INFO     | corecount: 12
[2025-02-25 13:44:57] 2025-02-25 18:44:39,055 | INFO     | event service: False
[2025-02-25 13:44:57] 2025-02-25 18:44:39,055 | INFO     | sizes: {0: 2376716, 1: 2376971, 6: 2377177, 12: 2377205, 4926: 2403316, 4928: 2412441, 4936: 2412555}
[2025-02-25 13:44:57] 2025-02-25 18:44:39,055 | INFO     | --------------------------------------------------
[2025-02-25 13:44:57] 2025-02-25 18:44:39,055 | INFO     | 
[2025-02-25 13:44:57] 2025-02-25 18:44:39,056 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-25 13:44:57] 2025-02-25 18:44:39,078 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 13:44:57] 2025-02-25 18:44:39,079 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 13:44:57] 2025-02-25 18:44:39,079 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 13:44:57] 2025-02-25 18:44:39,079 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 13:44:57] 2025-02-25 18:44:39,079 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 13:44:57] 2025-02-25 18:44:39,079 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 13:44:57] 2025-02-25 18:44:39,080 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 13:44:57] 2025-02-25 18:44:39,080 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 13:44:57] 2025-02-25 18:44:39,080 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 13:44:57] 2025-02-25 18:44:39,080 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 13:44:57] 2025-02-25 18:44:39,080 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 13:44:57] 2025-02-25 18:44:39,080 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 13:44:57] 2025-02-25 18:44:39,081 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 13:44:57] 2025-02-25 18:44:39,081 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 13:44:57] 2025-02-25 18:44:39,081 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 13:44:57] 2025-02-25 18:44:39,081 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 13:44:57] 2025-02-25 18:44:39,081 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 13:44:57] 2025-02-25 18:44:39,081 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 13:44:57] 2025-02-25 18:44:39,082 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 13:44:57] 2025-02-25 18:44:39,082 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 13:44:57] 2025-02-25 18:44:39,082 | INFO     | job 6530435820 has completed (purged errors)
[2025-02-25 13:44:57] 2025-02-25 18:44:39,082 | INFO     | overall cleanup function is called
[2025-02-25 13:44:57] 2025-02-25 18:44:40,090 | INFO     | --- collectZombieJob: --- 10, [23326]
[2025-02-25 13:44:57] 2025-02-25 18:44:40,090 | INFO     | zombie collector waiting for pid 23326
[2025-02-25 13:44:57] 2025-02-25 18:44:40,091 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 13:44:57] 2025-02-25 18:44:40,091 | INFO     | collected zombie processes
[2025-02-25 13:44:57] 2025-02-25 18:44:40,091 | INFO     | will attempt to kill all subprocesses of pid=23326
[2025-02-25 13:44:57] 2025-02-25 18:44:40,155 | INFO     | process IDs to be killed: [23326] (in reverse order)
[2025-02-25 13:44:57] 2025-02-25 18:44:40,203 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 13:44:57] 2025-02-25 18:44:40,203 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 13:44:57] 2025-02-25 18:44:40,206 | INFO     | did not find any defunct processes belonging to 23326
[2025-02-25 13:44:57] 2025-02-25 18:44:40,208 | INFO     | did not find any defunct processes belonging to 23326
[2025-02-25 13:44:57] 2025-02-25 18:44:40,208 | INFO     | ready for new job
[2025-02-25 13:44:57] 2025-02-25 18:44:40,209 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 13:44:57] 2025-02-25 18:44:40,210 | INFO     | **************************************
[2025-02-25 13:44:57] 2025-02-25 18:44:40,210 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 13:44:57] 2025-02-25 18:44:40,210 | INFO     | **************************************
[2025-02-25 13:44:57] 2025-02-25 18:44:40,210 | INFO     | 
[2025-02-25 13:44:57] 2025-02-25 18:44:40,210 | INFO     | architecture information:
[2025-02-25 13:44:57] 2025-02-25 18:44:40,211 | INFO     | executing command: cat /etc/os-release
[2025-02-25 13:44:57] 2025-02-25 18:44:40,225 | INFO     | cat /etc/os-release:
[2025-02-25 13:44:57] NAME="CentOS Linux"
[2025-02-25 13:44:57] VERSION="7 (Core)"
[2025-02-25 13:44:57] ID="centos"
[2025-02-25 13:44:57] ID_LIKE="rhel fedora"
[2025-02-25 13:44:57] VERSION_ID="7"
[2025-02-25 13:44:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 13:44:57] ANSI_COLOR="0;31"
[2025-02-25 13:44:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 13:44:57] HOME_URL="https://www.centos.org/"
[2025-02-25 13:44:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 13:44:57] 
[2025-02-25 13:44:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 13:44:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 13:44:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 13:44:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 13:44:57] 
[2025-02-25 13:44:57] 2025-02-25 18:44:40,226 | INFO     | **************************************
[2025-02-25 13:44:57] 2025-02-25 18:44:40,729 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-25 13:44:57] 2025-02-25 18:44:40,745 | INFO     | sufficient remaining disk space (29358030848 B)
[2025-02-25 13:44:57] 2025-02-25 18:44:40,745 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 13:44:57] 2025-02-25 18:44:40,745 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 13:44:57] 2025-02-25 18:44:40,746 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-25 13:44:57] 2025-02-25 18:44:40,746 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 13:44:57] 2025-02-25 18:44:40,746 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 13:44:57] 2025-02-25 18:44:40,747 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 13:44:57] 2025-02-25 18:44:40,747 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 13:44:57] 2025-02-25 18:44:40,995 | INFO     | all payload control threads have been joined
[2025-02-25 13:44:57] 2025-02-25 18:44:41,220 | INFO     | all data control threads have been joined
[2025-02-25 13:44:57] 2025-02-25 18:44:41,238 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-02-25 13:44:57] 2025-02-25 18:44:41,238 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-02-25 13:44:57] 2025-02-25 18:44:41,238 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 13:44:57] 2025-02-25 18:44:41,238 | INFO     | will abort loop
[2025-02-25 13:44:57] 2025-02-25 18:44:41,262 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 13:44:57] 2025-02-25 18:44:41,424 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 13:44:57] 2025-02-25 18:44:41,751 | INFO     | [job] retrieve thread has finished
[2025-02-25 13:44:57] 2025-02-25 18:44:41,752 | INFO     | [job] queue monitor thread has finished
[2025-02-25 13:44:57] 2025-02-25 18:44:41,886 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 13:44:57] 2025-02-25 18:44:42,001 | INFO     | [payload] control thread has finished
[2025-02-25 13:44:57] 2025-02-25 18:44:42,058 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 13:44:57] 2025-02-25 18:44:42,093 | INFO     | all job control threads have been joined
[2025-02-25 13:44:57] 2025-02-25 18:44:42,225 | INFO     | [data] control thread has finished
[2025-02-25 13:44:57] 2025-02-25 18:44:42,244 | INFO     | [job] job monitor thread has finished
[2025-02-25 13:44:57] 2025-02-25 18:44:42,379 | INFO     | [payload] validate_post thread has finished
[2025-02-25 13:44:57] 2025-02-25 18:44:42,444 | INFO     | [data] copytool_in thread has finished
[2025-02-25 13:44:57] 2025-02-25 18:44:42,615 | INFO     | [payload] failed_post thread has finished
[2025-02-25 13:44:57] 2025-02-25 18:44:42,960 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 13:44:57] 2025-02-25 18:44:43,098 | INFO     | [job] control thread has finished
[2025-02-25 13:44:57] 2025-02-25 18:44:43,118 | INFO     | [job] validate thread has finished
[2025-02-25 13:44:57] 2025-02-25 18:44:43,267 | INFO     | [data] copytool_out thread has finished
[2025-02-25 13:44:57] 2025-02-25 18:44:45,430 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 13:44:57] 2025-02-25 18:44:51,213 | INFO     | job.realtimelogging is not enabled
[2025-02-25 13:44:57] 2025-02-25 18:44:52,218 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 13:44:57] 2025-02-25 18:44:52,322 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139718864611136)>', '<ExcThread(monitor, started 139717769164544)>']
[2025-02-25 13:44:57] 2025-02-25 18:44:52,800 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 13:44:57] 2025-02-25 18:44:52,800 | INFO     | [monitor] control thread has ended
[2025-02-25 13:44:57] 2025-02-25 18:44:57,344 | INFO     | all workflow threads have been joined
[2025-02-25 13:44:57] 2025-02-25 18:44:57,344 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 13:44:57] 2025-02-25 18:44:57,344 | INFO     | traces error code: 0
[2025-02-25 13:44:57] 2025-02-25 18:44:57,345 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 13:44:57] 2025-02-25 18:44:57,427 [wrapper] ==== pilot stdout END ====
[2025-02-25 13:44:57] 2025-02-25 18:44:57,431 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 13:44:57] 2025-02-25 18:44:57,434 [wrapper] pilotpid: 16956
[2025-02-25 13:44:57] 2025-02-25 18:44:57,438 [wrapper] Pilot exit status: 0
[2025-02-25 13:44:57] 2025-02-25 18:44:57,455 [wrapper] pandaids: 6530435820
[2025-02-25 13:44:57] 2025-02-25 18:44:57,497 [wrapper] cleanup supervisor_pilot 32372 16957
[2025-02-25 13:44:57] 2025-02-25 18:44:57,501 [wrapper] Test setup, not cleaning
[2025-02-25 13:44:57] 2025-02-25 18:44:57,508 [wrapper] apfmon messages muted
[2025-02-25 13:44:57] 2025-02-25 18:44:57,512 [wrapper] ==== wrapper stdout END ====
[2025-02-25 13:44:57] 2025-02-25 18:44:57,516 [wrapper] ==== wrapper stderr END ====
[2025-02-25 13:44:57]  *** Error codes and diagnostics ***
[2025-02-25 13:44:57]     "exeErrorCode": 0,
[2025-02-25 13:44:57]     "exeErrorDiag": "",
[2025-02-25 13:44:57]     "pilotErrorCode": 0,
[2025-02-25 13:44:57]     "pilotErrorDiag": "",
[2025-02-25 13:44:57]  *** Listing of results directory ***
[2025-02-25 13:44:57] total 437852
[2025-02-25 13:44:57] -rw-r--r-- 1 boincer umatlas    491065 Feb 25 09:02 pilot3.tar.gz
[2025-02-25 13:44:57] -rwx------ 1 boincer umatlas     35865 Feb 25 09:30 runpilot2-wrapper.sh
[2025-02-25 13:44:57] -rw-r--r-- 1 boincer umatlas      5118 Feb 25 09:31 queuedata.json
[2025-02-25 13:44:57] -rw-r--r-- 1 boincer umatlas       100 Feb 25 12:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 13:44:57] -rwxr-xr-x 1 boincer umatlas      7986 Feb 25 12:21 run_atlas
[2025-02-25 13:44:57] -rw-r--r-- 1 boincer umatlas       105 Feb 25 12:21 job.xml
[2025-02-25 13:44:57] -rw-r--r-- 2 boincer umatlas 250752243 Feb 25 12:21 EVNT.43401161._000044.pool.root.1
[2025-02-25 13:44:57] drwxrwx--x 2 boincer umatlas      4096 Feb 25 12:21 shared
[2025-02-25 13:44:57] -rw-r--r-- 2 boincer umatlas    503555 Feb 25 12:21 input.tar.gz
[2025-02-25 13:44:57] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 12:21 start_atlas.sh
[2025-02-25 13:44:57] -rw-r--r-- 1 boincer umatlas         0 Feb 25 12:21 boinc_lockfile
[2025-02-25 13:44:57] -rw-r--r-- 1 boincer umatlas      2541 Feb 25 12:21 pandaJob.out
[2025-02-25 13:44:57] -rw------- 1 boincer umatlas       424 Feb 25 12:21 setup.sh.local
[2025-02-25 13:44:57] -rw------- 1 boincer umatlas    988274 Feb 25 12:22 agis_schedconf.cvmfs.json
[2025-02-25 13:44:57] -rw------- 1 boincer umatlas   1577983 Feb 25 12:22 agis_ddmendpoints.agis.ALL.json
[2025-02-25 13:44:57] drwx------ 4 boincer umatlas      4096 Feb 25 12:22 pilot3
[2025-02-25 13:44:57] -rw-r--r-- 1 boincer umatlas      5869 Feb 25 13:36 init_data.xml
[2025-02-25 13:44:57] -rw------- 1 boincer umatlas 192149803 Feb 25 13:43 HITS.43401163._001085.pool.root.1
[2025-02-25 13:44:57] -rw------- 1 boincer umatlas        95 Feb 25 13:44 pilot_heartbeat.json
[2025-02-25 13:44:57] -rw-r--r-- 1 boincer umatlas      8192 Feb 25 13:44 boinc_mmap_file
[2025-02-25 13:44:57] -rw-r--r-- 1 boincer umatlas        27 Feb 25 13:44 wrapper_checkpoint.txt
[2025-02-25 13:44:57] -rw-r--r-- 1 boincer umatlas       529 Feb 25 13:44 boinc_task_state.xml
[2025-02-25 13:44:57] -rw------- 1 boincer umatlas      1044 Feb 25 13:44 memory_monitor_summary.json
[2025-02-25 13:44:57] -rw------- 1 boincer umatlas    363708 Feb 25 13:44 log.43401163._001085.job.log.tgz.1
[2025-02-25 13:44:57] -rw------- 1 boincer umatlas      7754 Feb 25 13:44 heartbeat.json
[2025-02-25 13:44:57] -rw------- 1 boincer umatlas      4596 Feb 25 13:44 pilotlog.txt
[2025-02-25 13:44:57] -rw------- 1 boincer umatlas    464093 Feb 25 13:44 log.43401163._001085.job.log.1
[2025-02-25 13:44:57] -rw------- 1 boincer umatlas       357 Feb 25 13:44 output.list
[2025-02-25 13:44:57] -rw-r--r-- 1 boincer umatlas       620 Feb 25 13:44 runtime_log
[2025-02-25 13:44:57] -rw------- 1 boincer umatlas    849920 Feb 25 13:44 result.tar.gz
[2025-02-25 13:44:57] -rw-r--r-- 1 boincer umatlas     11015 Feb 25 13:44 runtime_log.err
[2025-02-25 13:44:57] -rw------- 1 boincer umatlas       658 Feb 25 13:44 D1XNDmV8A76n9Rq4apOajLDm4fhM0noT9bVoFjIUDm3sfKDmY9dJPn.diag
[2025-02-25 13:44:57] -rw-r--r-- 1 boincer umatlas     21690 Feb 25 13:44 stderr.txt
[2025-02-25 13:44:57] HITS file was successfully produced:
[2025-02-25 13:44:57] -rw------- 1 boincer umatlas 192149803 Feb 25 13:43 shared/HITS.pool.root.1
[2025-02-25 13:44:57]  *** Contents of shared directory: ***
[2025-02-25 13:44:57] total 433872
[2025-02-25 13:44:57] -rw-r--r-- 2 boincer umatlas 250752243 Feb 25 12:21 ATLAS.root_0
[2025-02-25 13:44:57] -rw-r--r-- 2 boincer umatlas    503555 Feb 25 12:21 input.tar.gz
[2025-02-25 13:44:57] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 12:21 start_atlas.sh
[2025-02-25 13:44:57] -rw------- 1 boincer umatlas 192149803 Feb 25 13:43 HITS.pool.root.1
[2025-02-25 13:44:57] -rw------- 1 boincer umatlas    849920 Feb 25 13:44 result.tar.gz
13:44:59 (13277): run_atlas exited; CPU time 46860.556098
13:44:59 (13277): called boinc_finish(0)

</stderr_txt>
]]>

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