Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:15:39 (11233): wrapper (7.7.26015): starting
12:15:39 (11233): wrapper: running run_atlas (--nthreads 8)
[2025-02-25 12:15:39] Arguments: --nthreads 8
[2025-02-25 12:15:39] Threads: 8
[2025-02-25 12:15:39] Checking for CVMFS
[2025-02-25 12:15:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 12:15:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 12:15:40] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 12:15:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 12:15:40] 2.11.2.0 3761 175155 221464 143045 0 59 17492794 20275200 92 130560 0 47763056 99.995 6979663 39951 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-25 12:15:40] CVMFS is ok
[2025-02-25 12:15:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 12:15:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 12:15:40] Further information can be found at the LHC@home message board.
[2025-02-25 12:15:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 12:15:40] Checking for apptainer binary...
[2025-02-25 12:15:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 12:15:40] Running /usr/bin/apptainer --version
[2025-02-25 12:15:40] apptainer version 1.3.2-1.el7
[2025-02-25 12:15:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 12:15:40] c-205-36.aglt2.org
[2025-02-25 12:15:40] apptainer works
[2025-02-25 12:15:41] Set ATHENA_PROC_NUMBER=8
[2025-02-25 12:15:41] Set ATHENA_CORE_NUMBER=8
[2025-02-25 12:15:41] Starting ATLAS job with PandaID=6530444356
[2025-02-25 12:15:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 13:31:25]  *** The last 200 lines of the pilot log: ***
[2025-02-25 13:31:25]  filetype=log
[2025-02-25 13:31:25]  guid=e45890e8-6f49-4035-8612-e4154d8e31cb
[2025-02-25 13:31:25]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-02-25 13:31:25]  is_altstaged=None
[2025-02-25 13:31:25]  is_tar=False
[2025-02-25 13:31:25]  lfn=log.43401171._000811.job.log.tgz.1
[2025-02-25 13:31:25]  mtime=0
[2025-02-25 13:31:25]  protocol_id=None
[2025-02-25 13:31:25]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-25 13:31:25]  replicas=None
[2025-02-25 13:31:25]  scope=mc23_13p6TeV
[2025-02-25 13:31:25]  status=None
[2025-02-25 13:31:25]  status_code=0
[2025-02-25 13:31:25]  storage_token=
[2025-02-25 13:31:25]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6530444356/log.43401171._000811.job.log.tgz.1
[2025-02-25 13:31:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e0/10/log.43401171._000811.job.log.tgz.1
[2025-02-25 13:31:25]  workdir=None
[2025-02-25 13:31:25] ]
[2025-02-25 13:31:25] 2025-02-25 18:31:00,541 | INFO     | transferring file log.43401171._000811.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6530444356/log.43401171._000811.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-02-25 13:31:25] 2025-02-25 18:31:00,541 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6530444356/log.43401171._000811.job.log.tgz.1 /tmp/boinchome/slots/1/log.43401171._000811.job
[2025-02-25 13:31:25] 2025-02-25 18:31:00,560 | INFO     | adding to output.list: log.43401171._000811.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e0/10/log.43401171._000811.job.log.tg
[2025-02-25 13:31:25] 2025-02-25 18:31:00,560 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-25 13:31:25] 2025-02-25 18:31:00,561 | INFO     | summary of transferred files:
[2025-02-25 13:31:25] 2025-02-25 18:31:00,561 | INFO     |  -- lfn=log.43401171._000811.job.log.tgz.1, status_code=0, status=transferred
[2025-02-25 13:31:25] 2025-02-25 18:31:00,561 | INFO     | stage-out finished correctly
[2025-02-25 13:31:25] 2025-02-25 18:31:00,840 | INFO     | monitor loop #329: job 0:6530444356 is in state 'finished'
[2025-02-25 13:31:25] 2025-02-25 18:31:00,840 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 13:31:25] 2025-02-25 18:31:00,857 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-25 13:31:25] 2025-02-25 18:31:00,940 | INFO     | job 6530444356 has state=finished
[2025-02-25 13:31:25] 2025-02-25 18:31:00,941 | INFO     | preparing for final server update for job 6530444356 in state='finished'
[2025-02-25 13:31:25] 2025-02-25 18:31:01,005 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-02-25 13:31:25] 2025-02-25 18:31:01,006 | INFO     | this job has now completed (state=finished)
[2025-02-25 13:31:25] 2025-02-25 18:31:01,006 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-25 13:31:25] 2025-02-25 18:31:01,006 | INFO     | log transfer has been attempted: DONE
[2025-02-25 13:31:25] 2025-02-25 18:31:01,006 | INFO     | job 6530444356 has finished - writing final server update
[2025-02-25 13:31:25] 2025-02-25 18:31:01,006 | INFO     | total number of processed events: 400 (read)
[2025-02-25 13:31:25] 2025-02-25 18:31:01,008 | INFO     | executing command: lscpu
[2025-02-25 13:31:25] 2025-02-25 18:31:01,037 | INFO     | found 16 cores (8 cores per socket, 2 sockets)
[2025-02-25 13:31:25] 2025-02-25 18:31:01,051 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-25 13:31:25] 2025-02-25 18:31:03,343 | INFO     | monitor loop #330: job 0:6530444356 is in state 'finished'
[2025-02-25 13:31:25] 2025-02-25 18:31:03,344 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 13:31:25] 2025-02-25 18:31:05,698 | INFO     | CPU arch script returned: x86-64-v3
[2025-02-25 13:31:25] 2025-02-25 18:31:05,699 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6530444356/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 13:31:25] 2025-02-25 18:31:05,700 | INFO     | extracted standard info from prmon json
[2025-02-25 13:31:25] 2025-02-25 18:31:05,700 | INFO     | extracted standard memory fields from prmon json
[2025-02-25 13:31:25] 2025-02-25 18:31:05,700 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-25 13:31:25] 2025-02-25 18:31:05,701 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 13:31:25] 2025-02-25 18:31:05,701 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 13:31:25] 2025-02-25 18:31:05,703 | INFO     | fitting pss+swap vs Time
[2025-02-25 13:31:25] 2025-02-25 18:31:05,704 | INFO     | model: linear, x: [1740504084.0, 1740504145.0, 1740504206.0, 1740504267.0, 1740504328.0, 1740504389.0, 1740504450.0, 1740504511.0, 1740504572.0, 1740504633.0, 1740
[2025-02-25 13:31:25] 2025-02-25 18:31:05,704 | INFO     | sum of square deviations: 93240818.0
[2025-02-25 13:31:25] 2025-02-25 18:31:05,704 | INFO     | sum of deviations: 16690302171.0
[2025-02-25 13:31:25] 2025-02-25 18:31:05,704 | INFO     | mean x: 1740506097.0
[2025-02-25 13:31:25] 2025-02-25 18:31:05,705 | INFO     | mean y: 2398459.6716417912
[2025-02-25 13:31:25] 2025-02-25 18:31:05,705 | INFO     | -- intersect: -311551846907.3932
[2025-02-25 13:31:25] 2025-02-25 18:31:05,705 | INFO     | intersect: -311551846907.3932
[2025-02-25 13:31:25] 2025-02-25 18:31:05,705 | INFO     | chi2: 1.7189038815309865
[2025-02-25 13:31:25] 2025-02-25 18:31:05,705 | INFO     | -- intersect: -311551846907.3932
[2025-02-25 13:31:25] 2025-02-25 18:31:05,705 | INFO     | current memory leak: 179.00 B/s (using 67 data points, chi2=1.72)
[2025-02-25 13:31:25] 2025-02-25 18:31:05,706 | INFO     | ..............................
[2025-02-25 13:31:25] 2025-02-25 18:31:05,706 | INFO     | . Timing measurements:
[2025-02-25 13:31:25] 2025-02-25 18:31:05,706 | INFO     | . get job = 0 s
[2025-02-25 13:31:25] 2025-02-25 18:31:05,706 | INFO     | . initial setup = 2 s
[2025-02-25 13:31:25] 2025-02-25 18:31:05,706 | INFO     | . payload setup = 7 s
[2025-02-25 13:31:25] 2025-02-25 18:31:05,706 | INFO     | . stage-in = 0 s
[2025-02-25 13:31:25] 2025-02-25 18:31:05,707 | INFO     | . payload execution = 4482 s
[2025-02-25 13:31:25] 2025-02-25 18:31:05,707 | INFO     | . stage-out = 0 s
[2025-02-25 13:31:25] 2025-02-25 18:31:05,707 | INFO     | . log creation = 0 s
[2025-02-25 13:31:25] 2025-02-25 18:31:05,707 | INFO     | ..............................
[2025-02-25 13:31:25] 2025-02-25 18:31:05,787 | INFO     | 
[2025-02-25 13:31:25] 2025-02-25 18:31:05,787 | INFO     | job summary report
[2025-02-25 13:31:25] 2025-02-25 18:31:05,787 | INFO     | --------------------------------------------------
[2025-02-25 13:31:25] 2025-02-25 18:31:05,787 | INFO     | PanDA job id: 6530444356
[2025-02-25 13:31:25] 2025-02-25 18:31:05,787 | INFO     | task id: 43401171
[2025-02-25 13:31:25] 2025-02-25 18:31:05,788 | INFO     | errors: (none)
[2025-02-25 13:31:25] 2025-02-25 18:31:05,788 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 13:31:25] 2025-02-25 18:31:05,788 | INFO     | pilot state: finished 
[2025-02-25 13:31:25] 2025-02-25 18:31:05,788 | INFO     | transexitcode: 0
[2025-02-25 13:31:25] 2025-02-25 18:31:05,788 | INFO     | exeerrorcode: 0
[2025-02-25 13:31:25] 2025-02-25 18:31:05,788 | INFO     | exeerrordiag: 
[2025-02-25 13:31:25] 2025-02-25 18:31:05,788 | INFO     | exitcode: 0
[2025-02-25 13:31:25] 2025-02-25 18:31:05,788 | INFO     | exitmsg: OK
[2025-02-25 13:31:25] 2025-02-25 18:31:05,789 | INFO     | cpuconsumptiontime: 28961 s
[2025-02-25 13:31:25] 2025-02-25 18:31:05,789 | INFO     | nevents: 400
[2025-02-25 13:31:25] 2025-02-25 18:31:05,789 | INFO     | neventsw: 0
[2025-02-25 13:31:25] 2025-02-25 18:31:05,789 | INFO     | pid: 31865
[2025-02-25 13:31:25] 2025-02-25 18:31:05,789 | INFO     | pgrp: 31865
[2025-02-25 13:31:25] 2025-02-25 18:31:05,789 | INFO     | corecount: 8
[2025-02-25 13:31:25] 2025-02-25 18:31:05,789 | INFO     | event service: False
[2025-02-25 13:31:25] 2025-02-25 18:31:05,789 | INFO     | sizes: {0: 2376120, 1: 2376976, 5: 2377182, 12: 2377238, 4493: 2412078, 4494: 2412078, 4499: 2412376}
[2025-02-25 13:31:25] 2025-02-25 18:31:05,790 | INFO     | --------------------------------------------------
[2025-02-25 13:31:25] 2025-02-25 18:31:05,790 | INFO     | 
[2025-02-25 13:31:25] 2025-02-25 18:31:05,790 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-02-25 13:31:25] 2025-02-25 18:31:05,810 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 13:31:25] 2025-02-25 18:31:05,810 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 13:31:25] 2025-02-25 18:31:05,810 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 13:31:25] 2025-02-25 18:31:05,810 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 13:31:25] 2025-02-25 18:31:05,810 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 13:31:25] 2025-02-25 18:31:05,811 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 13:31:25] 2025-02-25 18:31:05,811 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 13:31:25] 2025-02-25 18:31:05,811 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 13:31:25] 2025-02-25 18:31:05,811 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 13:31:25] 2025-02-25 18:31:05,811 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 13:31:25] 2025-02-25 18:31:05,811 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 13:31:25] 2025-02-25 18:31:05,811 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 13:31:25] 2025-02-25 18:31:05,811 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 13:31:25] 2025-02-25 18:31:05,812 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 13:31:25] 2025-02-25 18:31:05,812 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 13:31:25] 2025-02-25 18:31:05,812 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 13:31:25] 2025-02-25 18:31:05,812 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 13:31:25] 2025-02-25 18:31:05,812 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 13:31:25] 2025-02-25 18:31:05,812 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 13:31:25] 2025-02-25 18:31:05,812 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 13:31:25] 2025-02-25 18:31:05,813 | INFO     | job 6530444356 has completed (purged errors)
[2025-02-25 13:31:25] 2025-02-25 18:31:05,813 | INFO     | overall cleanup function is called
[2025-02-25 13:31:25] 2025-02-25 18:31:06,821 | INFO     | --- collectZombieJob: --- 10, [31865]
[2025-02-25 13:31:25] 2025-02-25 18:31:06,821 | INFO     | zombie collector waiting for pid 31865
[2025-02-25 13:31:25] 2025-02-25 18:31:06,822 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 13:31:25] 2025-02-25 18:31:06,822 | INFO     | collected zombie processes
[2025-02-25 13:31:25] 2025-02-25 18:31:06,822 | INFO     | will attempt to kill all subprocesses of pid=31865
[2025-02-25 13:31:25] 2025-02-25 18:31:06,890 | INFO     | process IDs to be killed: [31865] (in reverse order)
[2025-02-25 13:31:25] 2025-02-25 18:31:06,947 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 13:31:25] 2025-02-25 18:31:06,948 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 13:31:25] 2025-02-25 18:31:06,951 | INFO     | did not find any defunct processes belonging to 31865
[2025-02-25 13:31:25] 2025-02-25 18:31:06,954 | INFO     | did not find any defunct processes belonging to 31865
[2025-02-25 13:31:25] 2025-02-25 18:31:06,955 | INFO     | ready for new job
[2025-02-25 13:31:25] 2025-02-25 18:31:06,955 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 13:31:25] 2025-02-25 18:31:06,956 | INFO     | **************************************
[2025-02-25 13:31:25] 2025-02-25 18:31:06,957 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 13:31:25] 2025-02-25 18:31:06,957 | INFO     | **************************************
[2025-02-25 13:31:25] 2025-02-25 18:31:06,957 | INFO     | 
[2025-02-25 13:31:25] 2025-02-25 18:31:06,958 | INFO     | architecture information:
[2025-02-25 13:31:25] 2025-02-25 18:31:06,958 | INFO     | executing command: cat /etc/os-release
[2025-02-25 13:31:25] 2025-02-25 18:31:06,971 | INFO     | cat /etc/os-release:
[2025-02-25 13:31:25] NAME="CentOS Linux"
[2025-02-25 13:31:25] VERSION="7 (Core)"
[2025-02-25 13:31:25] ID="centos"
[2025-02-25 13:31:25] ID_LIKE="rhel fedora"
[2025-02-25 13:31:25] VERSION_ID="7"
[2025-02-25 13:31:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 13:31:25] ANSI_COLOR="0;31"
[2025-02-25 13:31:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 13:31:25] HOME_URL="https://www.centos.org/"
[2025-02-25 13:31:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 13:31:25] 
[2025-02-25 13:31:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 13:31:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 13:31:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 13:31:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 13:31:25] 
[2025-02-25 13:31:25] 2025-02-25 18:31:06,972 | INFO     | **************************************
[2025-02-25 13:31:25] 2025-02-25 18:31:07,475 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-02-25 13:31:25] 2025-02-25 18:31:07,490 | INFO     | sufficient remaining disk space (32825671680 B)
[2025-02-25 13:31:25] 2025-02-25 18:31:07,490 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 13:31:25] 2025-02-25 18:31:07,490 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 13:31:25] 2025-02-25 18:31:07,491 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 13:31:25] 2025-02-25 18:31:07,491 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 13:31:25] 2025-02-25 18:31:07,491 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 13:31:25] 2025-02-25 18:31:07,492 | INFO     | aborting loop
[2025-02-25 13:31:25] 2025-02-25 18:31:08,144 | INFO     | all data control threads have been joined
[2025-02-25 13:31:25] 2025-02-25 18:31:08,336 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 13:31:25] 2025-02-25 18:31:08,336 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 13:31:25] 2025-02-25 18:31:08,337 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 13:31:25] 2025-02-25 18:31:08,496 | INFO     | [job] retrieve thread has finished
[2025-02-25 13:31:25] 2025-02-25 18:31:08,497 | INFO     | [job] queue monitor thread has finished
[2025-02-25 13:31:25] 2025-02-25 18:31:08,497 | INFO     | [job] job monitor thread has finished
[2025-02-25 13:31:25] 2025-02-25 18:31:08,602 | INFO     | all job control threads have been joined
[2025-02-25 13:31:25] 2025-02-25 18:31:08,635 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 13:31:25] 2025-02-25 18:31:08,789 | INFO     | all payload control threads have been joined
[2025-02-25 13:31:25] 2025-02-25 18:31:08,927 | INFO     | [payload] validate_post thread has finished
[2025-02-25 13:31:25] 2025-02-25 18:31:09,027 | INFO     | [data] copytool_in thread has finished
[2025-02-25 13:31:25] 2025-02-25 18:31:09,046 | INFO     | [payload] failed_post thread has finished
[2025-02-25 13:31:25] 2025-02-25 18:31:09,150 | INFO     | [data] control thread has finished
[2025-02-25 13:31:25] 2025-02-25 18:31:09,609 | INFO     | [job] control thread has finished
[2025-02-25 13:31:25] 2025-02-25 18:31:09,738 | INFO     | [job] validate thread has finished
[2025-02-25 13:31:25] 2025-02-25 18:31:09,763 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 13:31:25] 2025-02-25 18:31:09,795 | INFO     | [payload] control thread has finished
[2025-02-25 13:31:25] 2025-02-25 18:31:09,845 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 13:31:25] 2025-02-25 18:31:09,910 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 13:31:25] 2025-02-25 18:31:10,641 | INFO     | [data] copytool_out thread has finished
[2025-02-25 13:31:25] 2025-02-25 18:31:11,497 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 13:31:25] 2025-02-25 18:31:18,098 | INFO     | job.realtimelogging is not enabled
[2025-02-25 13:31:25] 2025-02-25 18:31:19,104 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 13:31:25] 2025-02-25 18:31:20,153 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140192779872064)>', '<ExcThread(monitor, started 140192354658048)>']
[2025-02-25 13:31:25] 2025-02-25 18:31:20,397 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 13:31:25] 2025-02-25 18:31:20,398 | INFO     | [monitor] control thread has ended
[2025-02-25 13:31:25] 2025-02-25 18:31:25,166 | INFO     | all workflow threads have been joined
[2025-02-25 13:31:25] 2025-02-25 18:31:25,166 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 13:31:25] 2025-02-25 18:31:25,167 | INFO     | traces error code: 0
[2025-02-25 13:31:25] 2025-02-25 18:31:25,168 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 13:31:25] 2025-02-25 18:31:25,281 [wrapper] ==== pilot stdout END ====
[2025-02-25 13:31:25] 2025-02-25 18:31:25,284 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 13:31:25] 2025-02-25 18:31:25,287 [wrapper] pilotpid: 18299
[2025-02-25 13:31:25] 2025-02-25 18:31:25,290 [wrapper] Pilot exit status: 0
[2025-02-25 13:31:25] 2025-02-25 18:31:25,301 [wrapper] pandaids: 6530444356
[2025-02-25 13:31:25] 2025-02-25 18:31:25,337 [wrapper] cleanup supervisor_pilot  1025 18300
[2025-02-25 13:31:25] 2025-02-25 18:31:25,340 [wrapper] Test setup, not cleaning
[2025-02-25 13:31:25] 2025-02-25 18:31:25,347 [wrapper] apfmon messages muted
[2025-02-25 13:31:25] 2025-02-25 18:31:25,350 [wrapper] ==== wrapper stdout END ====
[2025-02-25 13:31:25] 2025-02-25 18:31:25,353 [wrapper] ==== wrapper stderr END ====
[2025-02-25 13:31:25]  *** Error codes and diagnostics ***
[2025-02-25 13:31:25]     "exeErrorCode": 0,
[2025-02-25 13:31:25]     "exeErrorDiag": "",
[2025-02-25 13:31:25]     "pilotErrorCode": 0,
[2025-02-25 13:31:25]     "pilotErrorDiag": "",
[2025-02-25 13:31:25]  *** Listing of results directory ***
[2025-02-25 13:31:25] total 426756
[2025-02-25 13:31:25] -rw-r--r-- 1 boincer umatlas    491065 Feb 25 09:02 pilot3.tar.gz
[2025-02-25 13:31:25] -rw-r--r-- 1 boincer umatlas      5118 Feb 25 09:38 queuedata.json
[2025-02-25 13:31:25] -rwx------ 1 boincer umatlas     35865 Feb 25 09:38 runpilot2-wrapper.sh
[2025-02-25 13:31:25] -rw-r--r-- 1 boincer umatlas       100 Feb 25 12:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 13:31:25] -rwxr-xr-x 1 boincer umatlas      7986 Feb 25 12:15 run_atlas
[2025-02-25 13:31:25] -rw-r--r-- 1 boincer umatlas       105 Feb 25 12:15 job.xml
[2025-02-25 13:31:25] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 12:15 start_atlas.sh
[2025-02-25 13:31:25] drwxrwx--x 2 boincer umatlas      4096 Feb 25 12:15 shared
[2025-02-25 13:31:25] -rw-r--r-- 2 boincer umatlas    503549 Feb 25 12:15 input.tar.gz
[2025-02-25 13:31:25] -rw-r--r-- 2 boincer umatlas 252645349 Feb 25 12:15 EVNT.43401169._000033.pool.root.1
[2025-02-25 13:31:25] -rw-r--r-- 1 boincer umatlas         0 Feb 25 12:15 boinc_lockfile
[2025-02-25 13:31:25] -rw-r--r-- 1 boincer umatlas      2548 Feb 25 12:15 pandaJob.out
[2025-02-25 13:31:25] -rw------- 1 boincer umatlas       424 Feb 25 12:15 setup.sh.local
[2025-02-25 13:31:25] -rw------- 1 boincer umatlas    988282 Feb 25 12:15 agis_schedconf.cvmfs.json
[2025-02-25 13:31:25] -rw------- 1 boincer umatlas   1577983 Feb 25 12:15 agis_ddmendpoints.agis.ALL.json
[2025-02-25 13:31:25] drwx------ 4 boincer umatlas      4096 Feb 25 12:15 pilot3
[2025-02-25 13:31:25] -rw-r--r-- 1 boincer umatlas      6049 Feb 25 13:28 init_data.xml
[2025-02-25 13:31:25] -rw------- 1 boincer umatlas 179080880 Feb 25 13:30 HITS.43401171._000811.pool.root.1
[2025-02-25 13:31:25] -rw------- 1 boincer umatlas        95 Feb 25 13:30 pilot_heartbeat.json
[2025-02-25 13:31:25] -rw-r--r-- 1 boincer umatlas       530 Feb 25 13:30 boinc_task_state.xml
[2025-02-25 13:31:25] -rw------- 1 boincer umatlas      1053 Feb 25 13:30 memory_monitor_summary.json
[2025-02-25 13:31:25] -rw------- 1 boincer umatlas    297474 Feb 25 13:31 log.43401171._000811.job.log.tgz.1
[2025-02-25 13:31:25] -rw------- 1 boincer umatlas      7741 Feb 25 13:31 heartbeat.json
[2025-02-25 13:31:25] -rw-r--r-- 1 boincer umatlas        27 Feb 25 13:31 wrapper_checkpoint.txt
[2025-02-25 13:31:25] -rw-r--r-- 1 boincer umatlas      8192 Feb 25 13:31 boinc_mmap_file
[2025-02-25 13:31:25] -rw------- 1 boincer umatlas      4287 Feb 25 13:31 pilotlog.txt
[2025-02-25 13:31:25] -rw------- 1 boincer umatlas    440711 Feb 25 13:31 log.43401171._000811.job.log.1
[2025-02-25 13:31:25] -rw------- 1 boincer umatlas       357 Feb 25 13:31 output.list
[2025-02-25 13:31:25] -rw-r--r-- 1 boincer umatlas       620 Feb 25 13:31 runtime_log
[2025-02-25 13:31:25] -rw------- 1 boincer umatlas    757760 Feb 25 13:31 result.tar.gz
[2025-02-25 13:31:25] -rw------- 1 boincer umatlas       656 Feb 25 13:31 SfQLDmCGB76nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmRowKDmz8hAam.diag
[2025-02-25 13:31:25] -rw-r--r-- 1 boincer umatlas     11013 Feb 25 13:31 runtime_log.err
[2025-02-25 13:31:25] -rw-r--r-- 1 boincer umatlas     21291 Feb 25 13:31 stderr.txt
[2025-02-25 13:31:25] HITS file was successfully produced:
[2025-02-25 13:31:25] -rw------- 1 boincer umatlas 179080880 Feb 25 13:30 shared/HITS.pool.root.1
[2025-02-25 13:31:25]  *** Contents of shared directory: ***
[2025-02-25 13:31:25] total 422864
[2025-02-25 13:31:25] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 12:15 start_atlas.sh
[2025-02-25 13:31:25] -rw-r--r-- 2 boincer umatlas    503549 Feb 25 12:15 input.tar.gz
[2025-02-25 13:31:25] -rw-r--r-- 2 boincer umatlas 252645349 Feb 25 12:15 ATLAS.root_0
[2025-02-25 13:31:25] -rw------- 1 boincer umatlas 179080880 Feb 25 13:30 HITS.pool.root.1
[2025-02-25 13:31:25] -rw------- 1 boincer umatlas    757760 Feb 25 13:31 result.tar.gz
13:31:27 (11233): run_atlas exited; CPU time 28938.507673
13:31:27 (11233): called boinc_finish(0)

</stderr_txt>
]]>

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