Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:56:38 (31699): wrapper (7.7.26015): starting
11:56:38 (31699): wrapper: running run_atlas (--nthreads 8)
[2025-02-25 11:56:38] Arguments: --nthreads 8
[2025-02-25 11:56:38] Threads: 8
[2025-02-25 11:56:38] Checking for CVMFS
[2025-02-25 11:56:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 11:56:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 11:56:39] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 11:56:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 11:56:39] 2.11.2.0 2731 73384 107516 143045 1 56 20002878 20275200 1 130560 0 21025610 99.959 8147057 33543 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-25 11:56:39] CVMFS is ok
[2025-02-25 11:56:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 11:56:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 11:56:39] Further information can be found at the LHC@home message board.
[2025-02-25 11:56:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 11:56:39] Checking for apptainer binary...
[2025-02-25 11:56:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 11:56:39] Running /usr/bin/apptainer --version
[2025-02-25 11:56:39] apptainer version 1.3.2-1.el7
[2025-02-25 11:56:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 11:56:41] c-204-38.aglt2.org
[2025-02-25 11:56:41] apptainer works
[2025-02-25 11:56:41] Set ATHENA_PROC_NUMBER=8
[2025-02-25 11:56:41] Set ATHENA_CORE_NUMBER=8
[2025-02-25 11:56:41] Starting ATLAS job with PandaID=6530459295
[2025-02-25 11:56:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 14:09:16]  *** The last 200 lines of the pilot log: ***
[2025-02-25 14:09:16] 2025-02-25 19:08:57,849 | INFO     | monitor loop #574: job 0:6530459295 is in state 'finished'
[2025-02-25 14:09:16] 2025-02-25 19:08:57,849 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 14:09:16] 2025-02-25 19:08:58,027 | INFO     | CPU arch script returned: x86-64-v2
[2025-02-25 14:09:16] 2025-02-25 19:08:58,027 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6530459295/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 14:09:16] 2025-02-25 19:08:58,028 | INFO     | extracted standard info from prmon json
[2025-02-25 14:09:16] 2025-02-25 19:08:58,028 | INFO     | extracted standard memory fields from prmon json
[2025-02-25 14:09:16] 2025-02-25 19:08:58,028 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-25 14:09:16] 2025-02-25 19:08:58,029 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 14:09:16] 2025-02-25 19:08:58,029 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 14:09:16] 2025-02-25 19:08:58,033 | INFO     | fitting pss+swap vs Time
[2025-02-25 14:09:16] 2025-02-25 19:08:58,033 | INFO     | model: linear, x: [1740502648.0, 1740502709.0, 1740502770.0, 1740502831.0, 1740502892.0, 1740502953.0, 1740503014.0, 1740503075.0, 1740503136.0, 1740503197.0, 1740
[2025-02-25 14:09:16] 2025-02-25 19:08:58,033 | INFO     | sum of square deviations: 681212772.5
[2025-02-25 14:09:16] 2025-02-25 19:08:58,034 | INFO     | sum of deviations: 21715819287.5
[2025-02-25 14:09:16] 2025-02-25 19:08:58,034 | INFO     | mean x: 1740506582.5
[2025-02-25 14:09:16] 2025-02-25 19:08:58,034 | INFO     | mean y: 2447013.653846154
[2025-02-25 14:09:16] 2025-02-25 19:08:58,034 | INFO     | -- intersect: -55481724657.94265
[2025-02-25 14:09:16] 2025-02-25 19:08:58,035 | INFO     | intersect: -55481724657.94265
[2025-02-25 14:09:16] 2025-02-25 19:08:58,035 | INFO     | chi2: 3.136529083342964
[2025-02-25 14:09:16] 2025-02-25 19:08:58,035 | INFO     | model: linear, x: [1740502648.0, 1740502709.0, 1740502770.0, 1740502831.0, 1740502892.0, 1740502953.0, 1740503014.0, 1740503075.0, 1740503136.0, 1740503197.0, 1740
[2025-02-25 14:09:16] 2025-02-25 19:08:58,035 | INFO     | sum of square deviations: 605592750.0
[2025-02-25 14:09:16] 2025-02-25 19:08:58,036 | INFO     | sum of deviations: 29187770318.0
[2025-02-25 14:09:16] 2025-02-25 19:08:58,036 | INFO     | mean x: 1740506430.0
[2025-02-25 14:09:16] 2025-02-25 19:08:58,036 | INFO     | mean y: 2461537.488
[2025-02-25 14:09:16] 2025-02-25 19:08:58,036 | INFO     | -- intersect: -83884774424.0425
[2025-02-25 14:09:16] 2025-02-25 19:08:58,036 | INFO     | intersect: -83884774424.0425
[2025-02-25 14:09:16] 2025-02-25 19:08:58,037 | INFO     | chi2: 2.3821080193423145
[2025-02-25 14:09:16] 2025-02-25 19:08:58,037 | INFO     | current chi2=2.3821080193423145 (change=24.052736128197324 %)
[2025-02-25 14:09:16] 2025-02-25 19:08:58,037 | INFO     | right removable region: 124
[2025-02-25 14:09:16] 2025-02-25 19:08:58,037 | INFO     | model: linear, x: [1740502953.0, 1740503014.0, 1740503075.0, 1740503136.0, 1740503197.0, 1740503258.0, 1740503319.0, 1740503380.0, 1740503441.0, 1740503502.0, 1740
[2025-02-25 14:09:16] 2025-02-25 19:08:58,037 | INFO     | sum of square deviations: 605592750.0
[2025-02-25 14:09:16] 2025-02-25 19:08:58,038 | INFO     | sum of deviations: -8078468937.0
[2025-02-25 14:09:16] 2025-02-25 19:08:58,038 | INFO     | mean x: 1740506735.0
[2025-02-25 14:09:16] 2025-02-25 19:08:58,038 | INFO     | mean y: 2506771.52
[2025-02-25 14:09:16] 2025-02-25 19:08:58,038 | INFO     | -- intersect: 23220468996.689953
[2025-02-25 14:09:16] 2025-02-25 19:08:58,038 | INFO     | intersect: 23220468996.689953
[2025-02-25 14:09:16] 2025-02-25 19:08:58,039 | INFO     | chi2: 0.9384042866416894
[2025-02-25 14:09:16] 2025-02-25 19:08:58,039 | INFO     | current chi2=0.9384042866416894 (change=70.08144156465073 %)
[2025-02-25 14:09:16] 2025-02-25 19:08:58,039 | INFO     | model: linear, x: [1740503258.0, 1740503319.0, 1740503380.0, 1740503441.0, 1740503502.0, 1740503563.0, 1740503624.0, 1740503685.0, 1740503746.0, 1740503807.0, 1740
[2025-02-25 14:09:16] 2025-02-25 19:08:58,039 | INFO     | sum of square deviations: 535786790.0
[2025-02-25 14:09:16] 2025-02-25 19:08:58,040 | INFO     | sum of deviations: -11409876943.0
[2025-02-25 14:09:16] 2025-02-25 19:08:58,040 | INFO     | mean x: 1740506887.5
[2025-02-25 14:09:16] 2025-02-25 19:08:58,040 | INFO     | mean y: 2513832.5833333335
[2025-02-25 14:09:16] 2025-02-25 19:08:58,040 | INFO     | -- intersect: 37067573620.300285
[2025-02-25 14:09:16] 2025-02-25 19:08:58,040 | INFO     | intersect: 37067573620.300285
[2025-02-25 14:09:16] 2025-02-25 19:08:58,040 | INFO     | chi2: 0.8616154569781702
[2025-02-25 14:09:16] 2025-02-25 19:08:58,041 | INFO     | current chi2=0.8616154569781702 (change=8.182915482870065 %)
[2025-02-25 14:09:16] 2025-02-25 19:08:58,041 | INFO     | left removable region: 20
[2025-02-25 14:09:16] 2025-02-25 19:08:58,041 | INFO     | model: linear, x: [1740503868.0, 1740503929.0, 1740503990.0, 1740504051.0, 1740504112.0, 1740504173.0, 1740504234.0, 1740504295.0, 1740504356.0, 1740504417.0, 1740
[2025-02-25 14:09:16] 2025-02-25 19:08:58,041 | INFO     | sum of square deviations: 348769330.0
[2025-02-25 14:09:16] 2025-02-25 19:08:58,042 | INFO     | sum of deviations: 2127383234.9999998
[2025-02-25 14:09:16] 2025-02-25 19:08:58,042 | INFO     | mean x: 1740507009.5
[2025-02-25 14:09:16] 2025-02-25 19:08:58,042 | INFO     | mean y: 2518006.6153846155
[2025-02-25 14:09:16] 2025-02-25 19:08:58,042 | INFO     | -- intersect: -10614027411.556234
[2025-02-25 14:09:16] 2025-02-25 19:08:58,042 | INFO     | intersect: -10614027411.556234
[2025-02-25 14:09:16] 2025-02-25 19:08:58,042 | INFO     | chi2: 0.00014871055280831573
[2025-02-25 14:09:16] 2025-02-25 19:08:58,043 | INFO     | -- intersect: -10614027411.556234
[2025-02-25 14:09:16] 2025-02-25 19:08:58,043 | INFO     | current memory leak: 6.10 B/s (using 104 data points, chi2=0.00)
[2025-02-25 14:09:16] 2025-02-25 19:08:58,043 | INFO     | ..............................
[2025-02-25 14:09:16] 2025-02-25 19:08:58,043 | INFO     | . Timing measurements:
[2025-02-25 14:09:16] 2025-02-25 19:08:58,043 | INFO     | . get job = 0 s
[2025-02-25 14:09:16] 2025-02-25 19:08:58,044 | INFO     | . initial setup = 2 s
[2025-02-25 14:09:16] 2025-02-25 19:08:58,044 | INFO     | . payload setup = 8 s
[2025-02-25 14:09:16] 2025-02-25 19:08:58,044 | INFO     | . stage-in = 0 s
[2025-02-25 14:09:16] 2025-02-25 19:08:58,044 | INFO     | . payload execution = 7882 s
[2025-02-25 14:09:16] 2025-02-25 19:08:58,044 | INFO     | . stage-out = 0 s
[2025-02-25 14:09:16] 2025-02-25 19:08:58,044 | INFO     | . log creation = 0 s
[2025-02-25 14:09:16] 2025-02-25 19:08:58,044 | INFO     | ..............................
[2025-02-25 14:09:16] 2025-02-25 19:08:58,488 | INFO     | 
[2025-02-25 14:09:16] 2025-02-25 19:08:58,489 | INFO     | job summary report
[2025-02-25 14:09:16] 2025-02-25 19:08:58,489 | INFO     | --------------------------------------------------
[2025-02-25 14:09:16] 2025-02-25 19:08:58,489 | INFO     | PanDA job id: 6530459295
[2025-02-25 14:09:16] 2025-02-25 19:08:58,489 | INFO     | task id: 43401121
[2025-02-25 14:09:16] 2025-02-25 19:08:58,489 | INFO     | errors: (none)
[2025-02-25 14:09:16] 2025-02-25 19:08:58,490 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 14:09:16] 2025-02-25 19:08:58,490 | INFO     | pilot state: finished 
[2025-02-25 14:09:16] 2025-02-25 19:08:58,490 | INFO     | transexitcode: 0
[2025-02-25 14:09:16] 2025-02-25 19:08:58,490 | INFO     | exeerrorcode: 0
[2025-02-25 14:09:16] 2025-02-25 19:08:58,490 | INFO     | exeerrordiag: 
[2025-02-25 14:09:16] 2025-02-25 19:08:58,490 | INFO     | exitcode: 0
[2025-02-25 14:09:16] 2025-02-25 19:08:58,491 | INFO     | exitmsg: OK
[2025-02-25 14:09:16] 2025-02-25 19:08:58,491 | INFO     | cpuconsumptiontime: 56844 s
[2025-02-25 14:09:16] 2025-02-25 19:08:58,491 | INFO     | nevents: 400
[2025-02-25 14:09:16] 2025-02-25 19:08:58,491 | INFO     | neventsw: 0
[2025-02-25 14:09:16] 2025-02-25 19:08:58,491 | INFO     | pid: 9399
[2025-02-25 14:09:16] 2025-02-25 19:08:58,491 | INFO     | pgrp: 9399
[2025-02-25 14:09:16] 2025-02-25 19:08:58,492 | INFO     | corecount: 8
[2025-02-25 14:09:16] 2025-02-25 19:08:58,492 | INFO     | event service: False
[2025-02-25 14:09:16] 2025-02-25 19:08:58,492 | INFO     | sizes: {0: 2376772, 1: 2376971, 7: 2377177, 11: 2377205, 7894: 2404629, 7896: 2413754, 7905: 2413868}
[2025-02-25 14:09:16] 2025-02-25 19:08:58,492 | INFO     | --------------------------------------------------
[2025-02-25 14:09:16] 2025-02-25 19:08:58,492 | INFO     | 
[2025-02-25 14:09:16] 2025-02-25 19:08:58,492 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-25 14:09:16] 2025-02-25 19:08:58,519 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 14:09:16] 2025-02-25 19:08:58,519 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 14:09:16] 2025-02-25 19:08:58,520 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 14:09:16] 2025-02-25 19:08:58,520 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 14:09:16] 2025-02-25 19:08:58,520 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 14:09:16] 2025-02-25 19:08:58,520 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 14:09:16] 2025-02-25 19:08:58,520 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 14:09:16] 2025-02-25 19:08:58,520 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 14:09:16] 2025-02-25 19:08:58,521 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 14:09:16] 2025-02-25 19:08:58,521 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 14:09:16] 2025-02-25 19:08:58,521 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 14:09:16] 2025-02-25 19:08:58,521 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 14:09:16] 2025-02-25 19:08:58,521 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 14:09:16] 2025-02-25 19:08:58,522 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 14:09:16] 2025-02-25 19:08:58,522 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 14:09:16] 2025-02-25 19:08:58,522 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 14:09:16] 2025-02-25 19:08:58,522 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 14:09:16] 2025-02-25 19:08:58,522 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 14:09:16] 2025-02-25 19:08:58,522 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 14:09:16] 2025-02-25 19:08:58,522 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 14:09:16] 2025-02-25 19:08:58,522 | INFO     | job 6530459295 has completed (purged errors)
[2025-02-25 14:09:16] 2025-02-25 19:08:58,523 | INFO     | overall cleanup function is called
[2025-02-25 14:09:16] 2025-02-25 19:08:59,530 | INFO     | --- collectZombieJob: --- 10, [9399]
[2025-02-25 14:09:16] 2025-02-25 19:08:59,530 | INFO     | zombie collector waiting for pid 9399
[2025-02-25 14:09:16] 2025-02-25 19:08:59,531 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 14:09:16] 2025-02-25 19:08:59,531 | INFO     | collected zombie processes
[2025-02-25 14:09:16] 2025-02-25 19:08:59,531 | INFO     | will attempt to kill all subprocesses of pid=9399
[2025-02-25 14:09:16] 2025-02-25 19:08:59,600 | INFO     | process IDs to be killed: [9399] (in reverse order)
[2025-02-25 14:09:16] 2025-02-25 19:08:59,657 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 14:09:16] 2025-02-25 19:08:59,658 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 14:09:16] 2025-02-25 19:08:59,662 | INFO     | did not find any defunct processes belonging to 9399
[2025-02-25 14:09:16] 2025-02-25 19:08:59,665 | INFO     | did not find any defunct processes belonging to 9399
[2025-02-25 14:09:16] 2025-02-25 19:08:59,666 | INFO     | ready for new job
[2025-02-25 14:09:16] 2025-02-25 19:08:59,666 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 14:09:16] 2025-02-25 19:08:59,668 | INFO     | **************************************
[2025-02-25 14:09:16] 2025-02-25 19:08:59,668 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 14:09:16] 2025-02-25 19:08:59,668 | INFO     | **************************************
[2025-02-25 14:09:16] 2025-02-25 19:08:59,668 | INFO     | 
[2025-02-25 14:09:16] 2025-02-25 19:08:59,669 | INFO     | architecture information:
[2025-02-25 14:09:16] 2025-02-25 19:08:59,670 | INFO     | executing command: cat /etc/os-release
[2025-02-25 14:09:16] 2025-02-25 19:08:59,688 | INFO     | cat /etc/os-release:
[2025-02-25 14:09:16] NAME="CentOS Linux"
[2025-02-25 14:09:16] VERSION="7 (Core)"
[2025-02-25 14:09:16] ID="centos"
[2025-02-25 14:09:16] ID_LIKE="rhel fedora"
[2025-02-25 14:09:16] VERSION_ID="7"
[2025-02-25 14:09:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 14:09:16] ANSI_COLOR="0;31"
[2025-02-25 14:09:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 14:09:16] HOME_URL="https://www.centos.org/"
[2025-02-25 14:09:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 14:09:16] 
[2025-02-25 14:09:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 14:09:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 14:09:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 14:09:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 14:09:16] 
[2025-02-25 14:09:16] 2025-02-25 19:08:59,689 | INFO     | **************************************
[2025-02-25 14:09:16] 2025-02-25 19:09:00,192 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-25 14:09:16] 2025-02-25 19:09:00,211 | INFO     | sufficient remaining disk space (18546163712 B)
[2025-02-25 14:09:16] 2025-02-25 19:09:00,212 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 14:09:16] 2025-02-25 19:09:00,212 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 14:09:16] 2025-02-25 19:09:00,213 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 14:09:16] 2025-02-25 19:09:00,213 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 14:09:16] 2025-02-25 19:09:00,352 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-02-25 14:09:16] 2025-02-25 19:09:00,353 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-02-25 14:09:16] 2025-02-25 19:09:00,353 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 14:09:16] 2025-02-25 19:09:00,353 | INFO     | will abort loop
[2025-02-25 14:09:16] 2025-02-25 19:09:00,573 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 14:09:16] 2025-02-25 19:09:00,573 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 14:09:16] 2025-02-25 19:09:00,574 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 14:09:16] 2025-02-25 19:09:00,895 | INFO     | all job control threads have been joined
[2025-02-25 14:09:16] 2025-02-25 19:09:00,984 | INFO     | all payload control threads have been joined
[2025-02-25 14:09:16] 2025-02-25 19:09:01,000 | INFO     | all data control threads have been joined
[2025-02-25 14:09:16] 2025-02-25 19:09:01,218 | INFO     | [job] retrieve thread has finished
[2025-02-25 14:09:16] 2025-02-25 19:09:01,357 | INFO     | [job] job monitor thread has finished
[2025-02-25 14:09:16] 2025-02-25 19:09:01,447 | INFO     | [job] validate thread has finished
[2025-02-25 14:09:16] 2025-02-25 19:09:01,556 | INFO     | [payload] validate_post thread has finished
[2025-02-25 14:09:16] 2025-02-25 19:09:01,648 | INFO     | [data] copytool_in thread has finished
[2025-02-25 14:09:16] 2025-02-25 19:09:01,901 | INFO     | [job] control thread has finished
[2025-02-25 14:09:16] 2025-02-25 19:09:01,990 | INFO     | [payload] control thread has finished
[2025-02-25 14:09:16] 2025-02-25 19:09:01,997 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 14:09:16] 2025-02-25 19:09:02,005 | INFO     | [data] control thread has finished
[2025-02-25 14:09:16] 2025-02-25 19:09:02,147 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 14:09:16] 2025-02-25 19:09:02,219 | INFO     | [data] copytool_out thread has finished
[2025-02-25 14:09:16] 2025-02-25 19:09:02,233 | INFO     | [payload] failed_post thread has finished
[2025-02-25 14:09:16] 2025-02-25 19:09:02,488 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 14:09:16] 2025-02-25 19:09:03,150 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 14:09:16] 2025-02-25 19:09:04,156 | INFO     | [job] queue monitor thread has finished
[2025-02-25 14:09:16] 2025-02-25 19:09:04,219 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 14:09:16] 2025-02-25 19:09:10,420 | INFO     | job.realtimelogging is not enabled
[2025-02-25 14:09:16] 2025-02-25 19:09:11,425 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 14:09:16] 2025-02-25 19:09:11,495 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139981412640576)>', '<ExcThread(monitor, started 139980651337472)>']
[2025-02-25 14:09:16] 2025-02-25 19:09:11,627 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 14:09:16] 2025-02-25 19:09:11,628 | INFO     | [monitor] control thread has ended
[2025-02-25 14:09:16] 2025-02-25 19:09:16,511 | INFO     | all workflow threads have been joined
[2025-02-25 14:09:16] 2025-02-25 19:09:16,511 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 14:09:16] 2025-02-25 19:09:16,511 | INFO     | traces error code: 0
[2025-02-25 14:09:16] 2025-02-25 19:09:16,512 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 14:09:16] 2025-02-25 19:09:16,620 [wrapper] ==== pilot stdout END ====
[2025-02-25 14:09:16] 2025-02-25 19:09:16,625 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 14:09:16] 2025-02-25 19:09:16,630 [wrapper] pilotpid: 2958
[2025-02-25 14:09:16] 2025-02-25 19:09:16,635 [wrapper] Pilot exit status: 0
[2025-02-25 14:09:16] 2025-02-25 19:09:16,655 [wrapper] pandaids: 6530459295
[2025-02-25 14:09:16] 2025-02-25 19:09:16,705 [wrapper] cleanup supervisor_pilot 29386 2959
[2025-02-25 14:09:16] 2025-02-25 19:09:16,710 [wrapper] Test setup, not cleaning
[2025-02-25 14:09:16] 2025-02-25 19:09:16,720 [wrapper] apfmon messages muted
[2025-02-25 14:09:16] 2025-02-25 19:09:16,725 [wrapper] ==== wrapper stdout END ====
[2025-02-25 14:09:16] 2025-02-25 19:09:16,729 [wrapper] ==== wrapper stderr END ====
[2025-02-25 14:09:16]  *** Error codes and diagnostics ***
[2025-02-25 14:09:16]     "exeErrorCode": 0,
[2025-02-25 14:09:16]     "exeErrorDiag": "",
[2025-02-25 14:09:16]     "pilotErrorCode": 0,
[2025-02-25 14:09:16]     "pilotErrorDiag": "",
[2025-02-25 14:09:16]  *** Listing of results directory ***
[2025-02-25 14:09:16] total 434852
[2025-02-25 14:09:16] -rw-r--r-- 1 boincer umatlas    510871 Dec 18 17:02 pilot3.tar.gz
[2025-02-25 14:09:16] -rw-r--r-- 1 boincer umatlas      5118 Feb 25 09:44 queuedata.json
[2025-02-25 14:09:16] -rwx------ 1 boincer umatlas     35865 Feb 25 09:44 runpilot2-wrapper.sh
[2025-02-25 14:09:16] -rw-r--r-- 1 boincer umatlas       100 Feb 25 11:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 14:09:16] -rwxr-xr-x 1 boincer umatlas      7986 Feb 25 11:56 run_atlas
[2025-02-25 14:09:16] -rw-r--r-- 1 boincer umatlas       105 Feb 25 11:56 job.xml
[2025-02-25 14:09:16] -rw-r--r-- 2 boincer umatlas 253351324 Feb 25 11:56 EVNT.43401119._000080.pool.root.1
[2025-02-25 14:09:16] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 11:56 start_atlas.sh
[2025-02-25 14:09:16] drwxrwx--x 2 boincer umatlas      4096 Feb 25 11:56 shared
[2025-02-25 14:09:16] -rw-r--r-- 2 boincer umatlas    524690 Feb 25 11:56 input.tar.gz
[2025-02-25 14:09:16] -rw-r--r-- 1 boincer umatlas         0 Feb 25 11:56 boinc_lockfile
[2025-02-25 14:09:16] -rw-r--r-- 1 boincer umatlas      2541 Feb 25 11:56 pandaJob.out
[2025-02-25 14:09:16] -rw------- 1 boincer umatlas       462 Feb 25 11:56 setup.sh.local
[2025-02-25 14:09:16] -rw------- 1 boincer umatlas    988282 Feb 25 11:56 agis_schedconf.cvmfs.json
[2025-02-25 14:09:16] -rw------- 1 boincer umatlas   1577983 Feb 25 11:56 agis_ddmendpoints.agis.ALL.json
[2025-02-25 14:09:16] drwx------ 6 boincer umatlas      4096 Feb 25 11:56 pilot3
[2025-02-25 14:09:16] -rw-r--r-- 1 boincer umatlas      5905 Feb 25 14:01 init_data.xml
[2025-02-25 14:09:16] -rw------- 1 boincer umatlas 185920056 Feb 25 14:08 HITS.43401121._001989.pool.root.1
[2025-02-25 14:09:16] -rw-r--r-- 1 boincer umatlas       529 Feb 25 14:08 boinc_task_state.xml
[2025-02-25 14:09:16] -rw------- 1 boincer umatlas      1057 Feb 25 14:08 memory_monitor_summary.json
[2025-02-25 14:09:16] -rw------- 1 boincer umatlas    334929 Feb 25 14:08 log.43401121._001989.job.log.tgz.1
[2025-02-25 14:09:16] -rw------- 1 boincer umatlas        95 Feb 25 14:08 pilot_heartbeat.json
[2025-02-25 14:09:16] -rw------- 1 boincer umatlas      7764 Feb 25 14:08 heartbeat.json
[2025-02-25 14:09:16] -rw-r--r-- 1 boincer umatlas      8192 Feb 25 14:09 boinc_mmap_file
[2025-02-25 14:09:16] -rw-r--r-- 1 boincer umatlas        27 Feb 25 14:09 wrapper_checkpoint.txt
[2025-02-25 14:09:16] -rw------- 1 boincer umatlas      4473 Feb 25 14:09 pilotlog.txt
[2025-02-25 14:09:16] -rw------- 1 boincer umatlas    750434 Feb 25 14:09 log.43401121._001989.job.log.1
[2025-02-25 14:09:16] -rw------- 1 boincer umatlas       357 Feb 25 14:09 output.list
[2025-02-25 14:09:16] -rw-r--r-- 1 boincer umatlas       620 Feb 25 14:09 runtime_log
[2025-02-25 14:09:16] -rw------- 1 boincer umatlas   1105920 Feb 25 14:09 result.tar.gz
[2025-02-25 14:09:16] -rw-r--r-- 1 boincer umatlas     11388 Feb 25 14:09 runtime_log.err
[2025-02-25 14:09:16] -rw------- 1 boincer umatlas       660 Feb 25 14:09 cqlKDmULB76n9Rq4apOajLDm4fhM0noT9bVoFjIUDmdxfKDmvbXU4m.diag
[2025-02-25 14:09:16] -rw-r--r-- 1 boincer umatlas     21504 Feb 25 14:09 stderr.txt
[2025-02-25 14:09:16] HITS file was successfully produced:
[2025-02-25 14:09:16] -rw------- 1 boincer umatlas 185920056 Feb 25 14:08 shared/HITS.pool.root.1
[2025-02-25 14:09:16]  *** Contents of shared directory: ***
[2025-02-25 14:09:16] total 430600
[2025-02-25 14:09:16] -rw-r--r-- 2 boincer umatlas 253351324 Feb 25 11:56 ATLAS.root_0
[2025-02-25 14:09:16] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 11:56 start_atlas.sh
[2025-02-25 14:09:16] -rw-r--r-- 2 boincer umatlas    524690 Feb 25 11:56 input.tar.gz
[2025-02-25 14:09:16] -rw------- 1 boincer umatlas 185920056 Feb 25 14:08 HITS.pool.root.1
[2025-02-25 14:09:16] -rw------- 1 boincer umatlas   1105920 Feb 25 14:09 result.tar.gz
14:09:18 (31699): run_atlas exited; CPU time 56655.886032
14:09:18 (31699): called boinc_finish(0)

</stderr_txt>
]]>

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