Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:22:50 (375186): wrapper (7.7.26015): starting
13:22:50 (375186): wrapper: running run_atlas (--nthreads 9)
[2025-02-25 13:22:50] Arguments: --nthreads 9
[2025-02-25 13:22:50] Threads: 9
[2025-02-25 13:22:50] Checking for CVMFS
[2025-02-25 13:22:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 13:22:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 13:22:51] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 13:22:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 13:22:51] 2.11.5.0 3491167 16397 306952 143048 2 247 7259435 37641216 19007 130560 0 73538 90.578 1912071 38700 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-02-25 13:22:51] CVMFS is ok
[2025-02-25 13:22:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 13:22:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 13:22:51] Further information can be found at the LHC@home message board.
[2025-02-25 13:22:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 13:22:51] Checking for apptainer binary...
[2025-02-25 13:22:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 13:22:51] Running /usr/bin/apptainer --version
[2025-02-25 13:22:51] apptainer version 1.3.6-1.el9
[2025-02-25 13:22:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 13:22:51] c6-5-7-3.aglt2.org
[2025-02-25 13:22:51] apptainer works
[2025-02-25 13:22:51] Set ATHENA_PROC_NUMBER=9
[2025-02-25 13:22:51] Set ATHENA_CORE_NUMBER=9
[2025-02-25 13:22:51] Starting ATLAS job with PandaID=6530459262
[2025-02-25 13:22:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 14:46:03]  *** The last 200 lines of the pilot log: ***
[2025-02-25 14:46:03]  lfn=log.43401121._001956.job.log.tgz.1
[2025-02-25 14:46:03]  mtime=0
[2025-02-25 14:46:03]  protocol_id=None
[2025-02-25 14:46:03]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-25 14:46:03]  replicas=None
[2025-02-25 14:46:03]  scope=mc23_13p6TeV
[2025-02-25 14:46:03]  status=None
[2025-02-25 14:46:03]  status_code=0
[2025-02-25 14:46:03]  storage_token=
[2025-02-25 14:46:03]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6530459262/log.43401121._001956.job.log.tgz.1
[2025-02-25 14:46:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bb/84/log.43401121._001956.job.log.tgz.1
[2025-02-25 14:46:03]  workdir=None
[2025-02-25 14:46:03] ]
[2025-02-25 14:46:03] 2025-02-25 19:45:41,289 | INFO     | transferring file log.43401121._001956.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6530459262/log.43401121._001956.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-02-25 14:46:03] 2025-02-25 19:45:41,289 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6530459262/log.43401121._001956.job.log.tgz.1 /tmp/boinchome/slots/1/log.43401121._001956.job
[2025-02-25 14:46:03] 2025-02-25 19:45:41,306 | INFO     | adding to output.list: log.43401121._001956.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bb/84/log.43401121._001956.job.log.tg
[2025-02-25 14:46:03] 2025-02-25 19:45:41,307 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-25 14:46:03] 2025-02-25 19:45:41,307 | INFO     | summary of transferred files:
[2025-02-25 14:46:03] 2025-02-25 19:45:41,307 | INFO     |  -- lfn=log.43401121._001956.job.log.tgz.1, status_code=0, status=transferred
[2025-02-25 14:46:03] 2025-02-25 19:45:41,308 | INFO     | stage-out finished correctly
[2025-02-25 14:46:03] 2025-02-25 19:45:42,591 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-25 14:46:03] 2025-02-25 19:45:44,358 | INFO     | job 6530459262 has state=finished
[2025-02-25 14:46:03] 2025-02-25 19:45:44,358 | INFO     | preparing for final server update for job 6530459262 in state='finished'
[2025-02-25 14:46:03] 2025-02-25 19:45:44,359 | INFO     | this job has now completed (state=finished)
[2025-02-25 14:46:03] 2025-02-25 19:45:44,359 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-25 14:46:03] 2025-02-25 19:45:44,359 | INFO     | log transfer has been attempted: DONE
[2025-02-25 14:46:03] 2025-02-25 19:45:44,359 | INFO     | job 6530459262 has finished - writing final server update
[2025-02-25 14:46:03] 2025-02-25 19:45:44,360 | INFO     | total number of processed events: 400 (read)
[2025-02-25 14:46:03] 2025-02-25 19:45:44,375 | INFO     | executing command: lscpu
[2025-02-25 14:46:03] 2025-02-25 19:45:44,422 | INFO     | found 28 cores (14 cores per socket, 2 sockets)
[2025-02-25 14:46:03] 2025-02-25 19:45:44,457 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-25 14:46:03] 2025-02-25 19:45:48,567 | INFO     | CPU arch script returned: x86-64-v4
[2025-02-25 14:46:03] 2025-02-25 19:45:48,568 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6530459262/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 14:46:03] 2025-02-25 19:45:48,575 | INFO     | extracted standard info from prmon json
[2025-02-25 14:46:03] 2025-02-25 19:45:48,575 | INFO     | extracted standard memory fields from prmon json
[2025-02-25 14:46:03] 2025-02-25 19:45:48,575 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-25 14:46:03] 2025-02-25 19:45:48,576 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 14:46:03] 2025-02-25 19:45:48,576 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 14:46:03] 2025-02-25 19:45:48,578 | INFO     | fitting pss+swap vs Time
[2025-02-25 14:46:03] 2025-02-25 19:45:48,579 | INFO     | model: linear, x: [1740508114.0, 1740508175.0, 1740508236.0, 1740508297.0, 1740508358.0, 1740508419.0, 1740508480.0, 1740508541.0, 1740508602.0, 1740508663.0, 1740
[2025-02-25 14:46:03] 2025-02-25 19:45:48,579 | INFO     | sum of square deviations: 125630262.5
[2025-02-25 14:46:03] 2025-02-25 19:45:48,579 | INFO     | sum of deviations: 16191413365.999998
[2025-02-25 14:46:03] 2025-02-25 19:45:48,579 | INFO     | mean x: 1740510340.5
[2025-02-25 14:46:03] 2025-02-25 19:45:48,580 | INFO     | mean y: 2217619.5135135134
[2025-02-25 14:46:03] 2025-02-25 19:45:48,580 | INFO     | -- intersect: -224317319966.68637
[2025-02-25 14:46:03] 2025-02-25 19:45:48,580 | INFO     | intersect: -224317319966.68637
[2025-02-25 14:46:03] 2025-02-25 19:45:48,580 | INFO     | chi2: 2.342315259052965
[2025-02-25 14:46:03] 2025-02-25 19:45:48,580 | INFO     | -- intersect: -224317319966.68637
[2025-02-25 14:46:03] 2025-02-25 19:45:48,580 | INFO     | current memory leak: 128.88 B/s (using 74 data points, chi2=2.34)
[2025-02-25 14:46:03] 2025-02-25 19:45:48,581 | INFO     | ..............................
[2025-02-25 14:46:03] 2025-02-25 19:45:48,581 | INFO     | . Timing measurements:
[2025-02-25 14:46:03] 2025-02-25 19:45:48,581 | INFO     | . get job = 0 s
[2025-02-25 14:46:03] 2025-02-25 19:45:48,581 | INFO     | . initial setup = 2 s
[2025-02-25 14:46:03] 2025-02-25 19:45:48,581 | INFO     | . payload setup = 6 s
[2025-02-25 14:46:03] 2025-02-25 19:45:48,581 | INFO     | . stage-in = 0 s
[2025-02-25 14:46:03] 2025-02-25 19:45:48,581 | INFO     | . payload execution = 4932 s
[2025-02-25 14:46:03] 2025-02-25 19:45:48,581 | INFO     | . stage-out = 0 s
[2025-02-25 14:46:03] 2025-02-25 19:45:48,581 | INFO     | . log creation = 0 s
[2025-02-25 14:46:03] 2025-02-25 19:45:48,581 | INFO     | ..............................
[2025-02-25 14:46:03] 2025-02-25 19:45:48,665 | INFO     | 
[2025-02-25 14:46:03] 2025-02-25 19:45:48,665 | INFO     | job summary report
[2025-02-25 14:46:03] 2025-02-25 19:45:48,665 | INFO     | --------------------------------------------------
[2025-02-25 14:46:03] 2025-02-25 19:45:48,665 | INFO     | PanDA job id: 6530459262
[2025-02-25 14:46:03] 2025-02-25 19:45:48,665 | INFO     | task id: 43401121
[2025-02-25 14:46:03] 2025-02-25 19:45:48,665 | INFO     | errors: (none)
[2025-02-25 14:46:03] 2025-02-25 19:45:48,665 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 14:46:03] 2025-02-25 19:45:48,665 | INFO     | pilot state: finished 
[2025-02-25 14:46:03] 2025-02-25 19:45:48,665 | INFO     | transexitcode: 0
[2025-02-25 14:46:03] 2025-02-25 19:45:48,665 | INFO     | exeerrorcode: 0
[2025-02-25 14:46:03] 2025-02-25 19:45:48,665 | INFO     | exeerrordiag: 
[2025-02-25 14:46:03] 2025-02-25 19:45:48,665 | INFO     | exitcode: 0
[2025-02-25 14:46:03] 2025-02-25 19:45:48,665 | INFO     | exitmsg: OK
[2025-02-25 14:46:03] 2025-02-25 19:45:48,666 | INFO     | cpuconsumptiontime: 35127 s
[2025-02-25 14:46:03] 2025-02-25 19:45:48,666 | INFO     | nevents: 400
[2025-02-25 14:46:03] 2025-02-25 19:45:48,666 | INFO     | neventsw: 0
[2025-02-25 14:46:03] 2025-02-25 19:45:48,666 | INFO     | pid: 390859
[2025-02-25 14:46:03] 2025-02-25 19:45:48,666 | INFO     | pgrp: 390859
[2025-02-25 14:46:03] 2025-02-25 19:45:48,666 | INFO     | corecount: 9
[2025-02-25 14:46:03] 2025-02-25 19:45:48,666 | INFO     | event service: False
[2025-02-25 14:46:03] 2025-02-25 19:45:48,666 | INFO     | sizes: {0: 2376941, 4: 2377147, 11: 2377175, 4942: 2403282, 4943: 2412223, 4945: 2412279, 4951: 2412577}
[2025-02-25 14:46:03] 2025-02-25 19:45:48,666 | INFO     | --------------------------------------------------
[2025-02-25 14:46:03] 2025-02-25 19:45:48,666 | INFO     | 
[2025-02-25 14:46:03] 2025-02-25 19:45:48,666 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-02-25 14:46:03] 2025-02-25 19:45:48,685 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 14:46:03] 2025-02-25 19:45:48,686 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 14:46:03] 2025-02-25 19:45:48,686 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 14:46:03] 2025-02-25 19:45:48,686 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 14:46:03] 2025-02-25 19:45:48,686 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 14:46:03] 2025-02-25 19:45:48,686 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 14:46:03] 2025-02-25 19:45:48,686 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 14:46:03] 2025-02-25 19:45:48,686 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 14:46:03] 2025-02-25 19:45:48,686 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 14:46:03] 2025-02-25 19:45:48,686 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 14:46:03] 2025-02-25 19:45:48,686 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 14:46:03] 2025-02-25 19:45:48,686 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 14:46:03] 2025-02-25 19:45:48,686 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 14:46:03] 2025-02-25 19:45:48,686 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 14:46:03] 2025-02-25 19:45:48,687 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 14:46:03] 2025-02-25 19:45:48,687 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 14:46:03] 2025-02-25 19:45:48,687 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 14:46:03] 2025-02-25 19:45:48,687 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 14:46:03] 2025-02-25 19:45:48,687 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 14:46:03] 2025-02-25 19:45:48,687 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 14:46:03] 2025-02-25 19:45:48,687 | INFO     | job 6530459262 has completed (purged errors)
[2025-02-25 14:46:03] 2025-02-25 19:45:48,687 | INFO     | overall cleanup function is called
[2025-02-25 14:46:03] 2025-02-25 19:45:48,795 | WARNING  | process 390859 can no longer be monitored (due to stat problems) - aborting
[2025-02-25 14:46:03] 2025-02-25 19:45:49,062 | INFO     | using path: /tmp/boinchome/slots/1/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 14:46:03] 2025-02-25 19:45:49,062 | INFO     | using path: /tmp/boinchome/slots/1/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 14:46:03] 2025-02-25 19:45:49,063 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/1/PanDA_Pilot-6530459262/payload.stdout) since it has not been created yet
[2025-02-25 14:46:03] 2025-02-25 19:45:49,063 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-02-25 14:46:03] 2025-02-25 19:45:49,074 | INFO     | sufficient remaining disk space (73692872704 B)
[2025-02-25 14:46:03] 2025-02-25 19:45:49,075 | WARNING  | skipping size check of workdir since it has not been created yet
[2025-02-25 14:46:03] 2025-02-25 19:45:49,075 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/1/PanDA_Pilot-6530459262/HITS.43401121._001956.pool.root.1 since it does not exist
[2025-02-25 14:46:03] 2025-02-25 19:45:49,300 | INFO     | number of running child processes to parent process 390859: 1
[2025-02-25 14:46:03] 2025-02-25 19:45:49,301 | INFO     | maximum number of monitored processes: 6
[2025-02-25 14:46:03] 2025-02-25 19:45:49,301 | INFO     | aborting job monitoring since job object (job id=6530459262) has expired
[2025-02-25 14:46:03] 2025-02-25 19:45:49,694 | INFO     | --- collectZombieJob: --- 10, [390859]
[2025-02-25 14:46:03] 2025-02-25 19:45:49,695 | INFO     | zombie collector waiting for pid 390859
[2025-02-25 14:46:03] 2025-02-25 19:45:49,695 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 14:46:03] 2025-02-25 19:45:49,695 | INFO     | collected zombie processes
[2025-02-25 14:46:03] 2025-02-25 19:45:49,695 | INFO     | will attempt to kill all subprocesses of pid=390859
[2025-02-25 14:46:03] 2025-02-25 19:45:49,917 | INFO     | process IDs to be killed: [390859] (in reverse order)
[2025-02-25 14:46:03] 2025-02-25 19:45:50,057 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 14:46:03] 2025-02-25 19:45:50,057 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 14:46:03] 2025-02-25 19:45:50,072 | INFO     | did not find any defunct processes belonging to 390859
[2025-02-25 14:46:03] 2025-02-25 19:45:50,086 | INFO     | did not find any defunct processes belonging to 390859
[2025-02-25 14:46:03] 2025-02-25 19:45:50,086 | INFO     | ready for new job
[2025-02-25 14:46:03] 2025-02-25 19:45:50,086 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 14:46:03] 2025-02-25 19:45:50,088 | INFO     | **************************************
[2025-02-25 14:46:03] 2025-02-25 19:45:50,088 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 14:46:03] 2025-02-25 19:45:50,088 | INFO     | **************************************
[2025-02-25 14:46:03] 2025-02-25 19:45:50,088 | INFO     | 
[2025-02-25 14:46:03] 2025-02-25 19:45:50,103 | INFO     | architecture information:
[2025-02-25 14:46:03] 2025-02-25 19:45:50,104 | INFO     | executing command: cat /etc/os-release
[2025-02-25 14:46:03] 2025-02-25 19:45:50,117 | INFO     | cat /etc/os-release:
[2025-02-25 14:46:03] NAME="CentOS Linux"
[2025-02-25 14:46:03] VERSION="7 (Core)"
[2025-02-25 14:46:03] ID="centos"
[2025-02-25 14:46:03] ID_LIKE="rhel fedora"
[2025-02-25 14:46:03] VERSION_ID="7"
[2025-02-25 14:46:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 14:46:03] ANSI_COLOR="0;31"
[2025-02-25 14:46:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 14:46:03] HOME_URL="https://www.centos.org/"
[2025-02-25 14:46:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 14:46:03] 
[2025-02-25 14:46:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 14:46:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 14:46:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 14:46:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 14:46:03] 
[2025-02-25 14:46:03] 2025-02-25 19:45:50,117 | INFO     | **************************************
[2025-02-25 14:46:03] 2025-02-25 19:45:50,620 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-02-25 14:46:03] 2025-02-25 19:45:50,635 | INFO     | sufficient remaining disk space (73692872704 B)
[2025-02-25 14:46:03] 2025-02-25 19:45:50,635 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 14:46:03] 2025-02-25 19:45:50,635 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 14:46:03] 2025-02-25 19:45:50,636 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 14:46:03] 2025-02-25 19:45:50,636 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 14:46:03] 2025-02-25 19:45:50,636 | INFO     | aborting loop
[2025-02-25 14:46:03] 2025-02-25 19:45:50,651 | INFO     | all job control threads have been joined
[2025-02-25 14:46:03] 2025-02-25 19:45:50,834 | INFO     | all data control threads have been joined
[2025-02-25 14:46:03] 2025-02-25 19:45:50,951 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 14:46:03] 2025-02-25 19:45:50,951 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 14:46:03] 2025-02-25 19:45:50,951 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 14:46:03] 2025-02-25 19:45:51,037 | INFO     | all payload control threads have been joined
[2025-02-25 14:46:03] 2025-02-25 19:45:51,641 | INFO     | [job] retrieve thread has finished
[2025-02-25 14:46:03] 2025-02-25 19:45:51,641 | INFO     | [job] job monitor thread has finished
[2025-02-25 14:46:03] 2025-02-25 19:45:51,641 | INFO     | [job] queue monitor thread has finished
[2025-02-25 14:46:03] 2025-02-25 19:45:51,657 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 14:46:03] 2025-02-25 19:45:51,657 | INFO     | [job] control thread has finished
[2025-02-25 14:46:03] 2025-02-25 19:45:51,733 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 14:46:03] 2025-02-25 19:45:51,840 | INFO     | [data] control thread has finished
[2025-02-25 14:46:03] 2025-02-25 19:45:51,898 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 14:46:03] 2025-02-25 19:45:51,901 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 14:46:03] 2025-02-25 19:45:52,022 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 14:46:03] 2025-02-25 19:45:52,042 | INFO     | [payload] control thread has finished
[2025-02-25 14:46:03] 2025-02-25 19:45:52,616 | INFO     | [payload] failed_post thread has finished
[2025-02-25 14:46:03] 2025-02-25 19:45:52,675 | INFO     | [payload] validate_post thread has finished
[2025-02-25 14:46:03] 2025-02-25 19:45:52,687 | INFO     | [data] copytool_in thread has finished
[2025-02-25 14:46:03] 2025-02-25 19:45:53,120 | INFO     | [job] validate thread has finished
[2025-02-25 14:46:03] 2025-02-25 19:45:53,176 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 14:46:03] 2025-02-25 19:45:53,907 | INFO     | [data] copytool_out thread has finished
[2025-02-25 14:46:03] 2025-02-25 19:45:57,183 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 14:46:03] 2025-02-25 19:45:58,159 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140670870292288)>', '<ExcThread(monitor, started 140670593369856)>']
[2025-02-25 14:46:03] 2025-02-25 19:45:58,991 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 14:46:03] 2025-02-25 19:45:58,992 | INFO     | [monitor] control thread has ended
[2025-02-25 14:46:03] 2025-02-25 19:46:03,185 | INFO     | all workflow threads have been joined
[2025-02-25 14:46:03] 2025-02-25 19:46:03,186 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 14:46:03] 2025-02-25 19:46:03,186 | INFO     | traces error code: 0
[2025-02-25 14:46:03] 2025-02-25 19:46:03,187 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 14:46:03] 2025-02-25 19:46:03,414 [wrapper] ==== pilot stdout END ====
[2025-02-25 14:46:03] 2025-02-25 19:46:03,417 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 14:46:03] 2025-02-25 19:46:03,419 [wrapper] pilotpid: 380777
[2025-02-25 14:46:03] 2025-02-25 19:46:03,422 [wrapper] Pilot exit status: 0
[2025-02-25 14:46:03] 2025-02-25 19:46:03,431 [wrapper] pandaids: 6530459262
[2025-02-25 14:46:03] 2025-02-25 19:46:03,527 [wrapper] cleanup supervisor_pilot  907483 380778
[2025-02-25 14:46:03] 2025-02-25 19:46:03,530 [wrapper] Test setup, not cleaning
[2025-02-25 14:46:03] 2025-02-25 19:46:03,535 [wrapper] apfmon messages muted
[2025-02-25 14:46:03] 2025-02-25 19:46:03,538 [wrapper] ==== wrapper stdout END ====
[2025-02-25 14:46:03] 2025-02-25 19:46:03,541 [wrapper] ==== wrapper stderr END ====
[2025-02-25 14:46:03]  *** Error codes and diagnostics ***
[2025-02-25 14:46:03]     "exeErrorCode": 0,
[2025-02-25 14:46:03]     "exeErrorDiag": "",
[2025-02-25 14:46:03]     "pilotErrorCode": 0,
[2025-02-25 14:46:03]     "pilotErrorDiag": "",
[2025-02-25 14:46:03]  *** Listing of results directory ***
[2025-02-25 14:46:03] total 431148
[2025-02-25 14:46:03] -rw-r--r--. 1 boincer umatlas    491065 Feb 25 09:02 pilot3.tar.gz
[2025-02-25 14:46:03] -rw-r--r--. 1 boincer umatlas      5118 Feb 25 09:44 queuedata.json
[2025-02-25 14:46:03] -rwx------. 1 boincer umatlas     35865 Feb 25 09:44 runpilot2-wrapper.sh
[2025-02-25 14:46:03] -rw-r--r--. 1 boincer umatlas       100 Feb 25 13:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 14:46:03] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 25 13:22 run_atlas
[2025-02-25 14:46:03] -rw-r--r--. 1 boincer umatlas       105 Feb 25 13:22 job.xml
[2025-02-25 14:46:03] -rw-r--r--. 2 boincer umatlas 249277596 Feb 25 13:22 EVNT.43401119._000079.pool.root.1
[2025-02-25 14:46:03] -rw-r--r--. 2 boincer umatlas     17569 Feb 25 13:22 start_atlas.sh
[2025-02-25 14:46:03] drwxrwx--x. 2 boincer umatlas      4096 Feb 25 13:22 shared
[2025-02-25 14:46:03] -rw-r--r--. 2 boincer umatlas    503554 Feb 25 13:22 input.tar.gz
[2025-02-25 14:46:03] -rw-r--r--. 1 boincer umatlas         0 Feb 25 13:22 boinc_lockfile
[2025-02-25 14:46:03] -rw-r--r--. 1 boincer umatlas      2540 Feb 25 13:22 pandaJob.out
[2025-02-25 14:46:03] -rw-------. 1 boincer umatlas       467 Feb 25 13:22 setup.sh.local
[2025-02-25 14:46:03] -rw-------. 1 boincer umatlas    988266 Feb 25 13:22 agis_schedconf.cvmfs.json
[2025-02-25 14:46:03] -rw-------. 1 boincer umatlas   1577983 Feb 25 13:23 agis_ddmendpoints.agis.ALL.json
[2025-02-25 14:46:03] drwx------. 4 boincer umatlas      4096 Feb 25 13:23 pilot3
[2025-02-25 14:46:03] -rw-r--r--. 1 boincer umatlas      6840 Feb 25 14:36 init_data.xml
[2025-02-25 14:46:03] -rw-------. 1 boincer umatlas 186818456 Feb 25 14:45 HITS.43401121._001956.pool.root.1
[2025-02-25 14:46:03] -rw-r--r--. 1 boincer umatlas       529 Feb 25 14:45 boinc_task_state.xml
[2025-02-25 14:46:03] -rw-------. 1 boincer umatlas      1037 Feb 25 14:45 memory_monitor_summary.json
[2025-02-25 14:46:03] -rw-------. 1 boincer umatlas        95 Feb 25 14:45 pilot_heartbeat.json
[2025-02-25 14:46:03] -rw-------. 1 boincer umatlas    312031 Feb 25 14:45 log.43401121._001956.job.log.tgz.1
[2025-02-25 14:46:03] -rw-------. 1 boincer umatlas      7726 Feb 25 14:45 heartbeat.json
[2025-02-25 14:46:03] -rw-------. 1 boincer umatlas      4215 Feb 25 14:46 pilotlog.txt
[2025-02-25 14:46:03] -rw-r--r--. 1 boincer umatlas        27 Feb 25 14:46 wrapper_checkpoint.txt
[2025-02-25 14:46:03] -rw-r--r--. 1 boincer umatlas      8192 Feb 25 14:46 boinc_mmap_file
[2025-02-25 14:46:03] -rw-------. 1 boincer umatlas    487770 Feb 25 14:46 log.43401121._001956.job.log.1
[2025-02-25 14:46:03] -rw-------. 1 boincer umatlas       357 Feb 25 14:46 output.list
[2025-02-25 14:46:03] -rw-r--r--. 1 boincer umatlas       620 Feb 25 14:46 runtime_log
[2025-02-25 14:46:03] -rw-------. 1 boincer umatlas    819200 Feb 25 14:46 result.tar.gz
[2025-02-25 14:46:03] -rw-r--r--. 1 boincer umatlas     11418 Feb 25 14:46 runtime_log.err
[2025-02-25 14:46:03] -rw-------. 1 boincer umatlas       652 Feb 25 14:46 leBMDmSLB76nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmerwKDmjGI8Qm.diag
[2025-02-25 14:46:03] -rw-r--r--. 1 boincer umatlas     21853 Feb 25 14:46 stderr.txt
[2025-02-25 14:46:03] HITS file was successfully produced:
[2025-02-25 14:46:03] -rw-------. 1 boincer umatlas 186818456 Feb 25 14:45 shared/HITS.pool.root.1
[2025-02-25 14:46:03]  *** Contents of shared directory: ***
[2025-02-25 14:46:03] total 427192
[2025-02-25 14:46:03] -rw-r--r--. 2 boincer umatlas 249277596 Feb 25 13:22 ATLAS.root_0
[2025-02-25 14:46:03] -rw-r--r--. 2 boincer umatlas     17569 Feb 25 13:22 start_atlas.sh
[2025-02-25 14:46:03] -rw-r--r--. 2 boincer umatlas    503554 Feb 25 13:22 input.tar.gz
[2025-02-25 14:46:03] -rw-------. 1 boincer umatlas 186818456 Feb 25 14:45 HITS.pool.root.1
[2025-02-25 14:46:03] -rw-------. 1 boincer umatlas    819200 Feb 25 14:46 result.tar.gz
14:46:05 (375186): run_atlas exited; CPU time 35093.471871
14:46:05 (375186): called boinc_finish(0)

</stderr_txt>
]]>

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