Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:00:49 (3352703): wrapper (7.7.26015): starting
12:00:49 (3352703): wrapper: running run_atlas (--nthreads 9)
[2025-02-25 12:00:49] Arguments: --nthreads 9
[2025-02-25 12:00:49] Threads: 9
[2025-02-25 12:00:49] Checking for CVMFS
[2025-02-25 12:00:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 12:00:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 12:00:49] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 12:00:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 12:00:50] 2.11.5.0 2844332 136757 309908 143045 0 377 13037593 37641217 20910 130560 0 541377 96.345 4557199 37554 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-02-25 12:00:50] CVMFS is ok
[2025-02-25 12:00:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 12:00:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 12:00:50] Further information can be found at the LHC@home message board.
[2025-02-25 12:00:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 12:00:50] Checking for apptainer binary...
[2025-02-25 12:00:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 12:00:50] Running /usr/bin/apptainer --version
[2025-02-25 12:00:50] apptainer version 1.3.6-1.el9
[2025-02-25 12:00:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 12:00:50] c6-6-39-4.aglt2.org
[2025-02-25 12:00:50] apptainer works
[2025-02-25 12:00:50] Set ATHENA_PROC_NUMBER=9
[2025-02-25 12:00:50] Set ATHENA_CORE_NUMBER=9
[2025-02-25 12:00:50] Starting ATLAS job with PandaID=6530459146
[2025-02-25 12:00:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 13:10:39]  *** The last 200 lines of the pilot log: ***
[2025-02-25 13:10:39]  protocol_id=None
[2025-02-25 13:10:39]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-25 13:10:39]  replicas=None
[2025-02-25 13:10:39]  scope=mc23_13p6TeV
[2025-02-25 13:10:39]  status=None
[2025-02-25 13:10:39]  status_code=0
[2025-02-25 13:10:39]  storage_token=
[2025-02-25 13:10:39]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6530459146/log.43401121._001840.job.log.tgz.1
[2025-02-25 13:10:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9c/5b/log.43401121._001840.job.log.tgz.1
[2025-02-25 13:10:39]  workdir=None
[2025-02-25 13:10:39] ]
[2025-02-25 13:10:39] 2025-02-25 18:10:08,819 | INFO     | transferring file log.43401121._001840.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6530459146/log.43401121._001840.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-02-25 13:10:39] 2025-02-25 18:10:08,820 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6530459146/log.43401121._001840.job.log.tgz.1 /tmp/boinchome/slots/2/log.43401121._001840.job
[2025-02-25 13:10:39] 2025-02-25 18:10:08,842 | INFO     | adding to output.list: log.43401121._001840.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9c/5b/log.43401121._001840.job.log.tg
[2025-02-25 13:10:39] 2025-02-25 18:10:08,843 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-25 13:10:39] 2025-02-25 18:10:08,843 | INFO     | summary of transferred files:
[2025-02-25 13:10:39] 2025-02-25 18:10:08,843 | INFO     |  -- lfn=log.43401121._001840.job.log.tgz.1, status_code=0, status=transferred
[2025-02-25 13:10:39] 2025-02-25 18:10:08,844 | INFO     | stage-out finished correctly
[2025-02-25 13:10:39] 2025-02-25 18:10:10,888 | WARNING  | process 3365377 can no longer be monitored (due to stat problems) - aborting
[2025-02-25 13:10:39] 2025-02-25 18:10:10,890 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6530459146/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 13:10:39] 2025-02-25 18:10:11,050 | INFO     | number of running child processes to parent process 3365377: 1
[2025-02-25 13:10:39] 2025-02-25 18:10:11,051 | INFO     | maximum number of monitored processes: 6
[2025-02-25 13:10:39] 2025-02-25 18:10:12,340 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-25 13:10:39] 2025-02-25 18:10:13,554 | INFO     | monitor loop #311: job 0:6530459146 is in state 'finished'
[2025-02-25 13:10:39] 2025-02-25 18:10:13,554 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 13:10:39] 2025-02-25 18:10:14,602 | INFO     | PID=3356415 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-02-25 13:10:39] 2025-02-25 18:10:14,602 | INFO     | .. there are 31 such processes running
[2025-02-25 13:10:39] 2025-02-25 18:10:14,786 | INFO     | job 6530459146 has state=finished
[2025-02-25 13:10:39] 2025-02-25 18:10:14,786 | INFO     | preparing for final server update for job 6530459146 in state='finished'
[2025-02-25 13:10:39] 2025-02-25 18:10:14,787 | INFO     | this job has now completed (state=finished)
[2025-02-25 13:10:39] 2025-02-25 18:10:14,787 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-25 13:10:39] 2025-02-25 18:10:14,787 | INFO     | log transfer has been attempted: DONE
[2025-02-25 13:10:39] 2025-02-25 18:10:14,787 | INFO     | job 6530459146 has finished - writing final server update
[2025-02-25 13:10:39] 2025-02-25 18:10:14,788 | INFO     | total number of processed events: 400 (read)
[2025-02-25 13:10:39] 2025-02-25 18:10:14,803 | INFO     | executing command: lscpu
[2025-02-25 13:10:39] 2025-02-25 18:10:14,863 | INFO     | found 28 cores (14 cores per socket, 2 sockets)
[2025-02-25 13:10:39] 2025-02-25 18:10:14,899 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-25 13:10:39] 2025-02-25 18:10:16,057 | INFO     | monitor loop #312: job 0:6530459146 is in state 'finished'
[2025-02-25 13:10:39] 2025-02-25 18:10:16,057 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 13:10:39] 2025-02-25 18:10:18,560 | INFO     | monitor loop #313: job 0:6530459146 is in state 'finished'
[2025-02-25 13:10:39] 2025-02-25 18:10:18,561 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 13:10:39] 2025-02-25 18:10:20,527 | INFO     | CPU arch script returned: x86-64-v4
[2025-02-25 13:10:39] 2025-02-25 18:10:20,528 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6530459146/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 13:10:39] 2025-02-25 18:10:20,529 | INFO     | extracted standard info from prmon json
[2025-02-25 13:10:39] 2025-02-25 18:10:20,530 | INFO     | extracted standard memory fields from prmon json
[2025-02-25 13:10:39] 2025-02-25 18:10:20,530 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-25 13:10:39] 2025-02-25 18:10:20,531 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 13:10:39] 2025-02-25 18:10:20,531 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 13:10:39] 2025-02-25 18:10:20,534 | INFO     | fitting pss+swap vs Time
[2025-02-25 13:10:39] 2025-02-25 18:10:20,534 | INFO     | model: linear, x: [1740503192.0, 1740503253.0, 1740503314.0, 1740503375.0, 1740503436.0, 1740503497.0, 1740503558.0, 1740503619.0, 1740503680.0, 1740503741.0, 1740
[2025-02-25 13:10:39] 2025-02-25 18:10:20,535 | INFO     | sum of square deviations: 70364110.0
[2025-02-25 13:10:39] 2025-02-25 18:10:20,535 | INFO     | sum of deviations: 13699677679.999998
[2025-02-25 13:10:39] 2025-02-25 18:10:20,535 | INFO     | mean x: 1740505022.0
[2025-02-25 13:10:39] 2025-02-25 18:10:20,535 | INFO     | mean y: 2142658.295081967
[2025-02-25 13:10:39] 2025-02-25 18:10:20,535 | INFO     | -- intersect: -338868878403.7393
[2025-02-25 13:10:39] 2025-02-25 18:10:20,535 | INFO     | intersect: -338868878403.7393
[2025-02-25 13:10:39] 2025-02-25 18:10:20,536 | INFO     | chi2: 1.733855604110949
[2025-02-25 13:10:39] 2025-02-25 18:10:20,536 | INFO     | -- intersect: -338868878403.7393
[2025-02-25 13:10:39] 2025-02-25 18:10:20,536 | INFO     | current memory leak: 194.70 B/s (using 61 data points, chi2=1.73)
[2025-02-25 13:10:39] 2025-02-25 18:10:20,536 | INFO     | ..............................
[2025-02-25 13:10:39] 2025-02-25 18:10:20,537 | INFO     | . Timing measurements:
[2025-02-25 13:10:39] 2025-02-25 18:10:20,537 | INFO     | . get job = 0 s
[2025-02-25 13:10:39] 2025-02-25 18:10:20,537 | INFO     | . initial setup = 4 s
[2025-02-25 13:10:39] 2025-02-25 18:10:20,537 | INFO     | . payload setup = 5 s
[2025-02-25 13:10:39] 2025-02-25 18:10:20,537 | INFO     | . stage-in = 0 s
[2025-02-25 13:10:39] 2025-02-25 18:10:20,537 | INFO     | . payload execution = 4120 s
[2025-02-25 13:10:39] 2025-02-25 18:10:20,537 | INFO     | . stage-out = 0 s
[2025-02-25 13:10:39] 2025-02-25 18:10:20,537 | INFO     | . log creation = 0 s
[2025-02-25 13:10:39] 2025-02-25 18:10:20,537 | INFO     | ..............................
[2025-02-25 13:10:39] 2025-02-25 18:10:20,632 | INFO     | 
[2025-02-25 13:10:39] 2025-02-25 18:10:20,632 | INFO     | job summary report
[2025-02-25 13:10:39] 2025-02-25 18:10:20,632 | INFO     | --------------------------------------------------
[2025-02-25 13:10:39] 2025-02-25 18:10:20,632 | INFO     | PanDA job id: 6530459146
[2025-02-25 13:10:39] 2025-02-25 18:10:20,633 | INFO     | task id: 43401121
[2025-02-25 13:10:39] 2025-02-25 18:10:20,633 | INFO     | errors: (none)
[2025-02-25 13:10:39] 2025-02-25 18:10:20,633 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 13:10:39] 2025-02-25 18:10:20,633 | INFO     | pilot state: finished 
[2025-02-25 13:10:39] 2025-02-25 18:10:20,633 | INFO     | transexitcode: 0
[2025-02-25 13:10:39] 2025-02-25 18:10:20,633 | INFO     | exeerrorcode: 0
[2025-02-25 13:10:39] 2025-02-25 18:10:20,633 | INFO     | exeerrordiag: 
[2025-02-25 13:10:39] 2025-02-25 18:10:20,633 | INFO     | exitcode: 0
[2025-02-25 13:10:39] 2025-02-25 18:10:20,633 | INFO     | exitmsg: OK
[2025-02-25 13:10:39] 2025-02-25 18:10:20,633 | INFO     | cpuconsumptiontime: 29617 s
[2025-02-25 13:10:39] 2025-02-25 18:10:20,633 | INFO     | nevents: 400
[2025-02-25 13:10:39] 2025-02-25 18:10:20,633 | INFO     | neventsw: 0
[2025-02-25 13:10:39] 2025-02-25 18:10:20,633 | INFO     | pid: 3365377
[2025-02-25 13:10:39] 2025-02-25 18:10:20,633 | INFO     | pgrp: 3365377
[2025-02-25 13:10:39] 2025-02-25 18:10:20,633 | INFO     | corecount: 9
[2025-02-25 13:10:39] 2025-02-25 18:10:20,634 | INFO     | event service: False
[2025-02-25 13:10:39] 2025-02-25 18:10:20,634 | INFO     | sizes: {0: 2376943, 5: 2377149, 11: 2377205, 4129: 2403080, 4130: 2403079, 4131: 2412076, 4134: 2412260, 4143: 2412430}
[2025-02-25 13:10:39] 2025-02-25 18:10:20,634 | INFO     | --------------------------------------------------
[2025-02-25 13:10:39] 2025-02-25 18:10:20,634 | INFO     | 
[2025-02-25 13:10:39] 2025-02-25 18:10:20,634 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-02-25 13:10:39] 2025-02-25 18:10:20,661 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 13:10:39] 2025-02-25 18:10:20,662 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 13:10:39] 2025-02-25 18:10:20,662 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 13:10:39] 2025-02-25 18:10:20,662 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 13:10:39] 2025-02-25 18:10:20,662 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 13:10:39] 2025-02-25 18:10:20,662 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 13:10:39] 2025-02-25 18:10:20,662 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 13:10:39] 2025-02-25 18:10:20,663 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 13:10:39] 2025-02-25 18:10:20,663 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 13:10:39] 2025-02-25 18:10:20,663 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 13:10:39] 2025-02-25 18:10:20,663 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 13:10:39] 2025-02-25 18:10:20,663 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 13:10:39] 2025-02-25 18:10:20,663 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 13:10:39] 2025-02-25 18:10:20,663 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 13:10:39] 2025-02-25 18:10:20,663 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 13:10:39] 2025-02-25 18:10:20,664 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 13:10:39] 2025-02-25 18:10:20,664 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 13:10:39] 2025-02-25 18:10:20,664 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 13:10:39] 2025-02-25 18:10:20,664 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 13:10:39] 2025-02-25 18:10:20,664 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 13:10:39] 2025-02-25 18:10:20,664 | INFO     | job 6530459146 has completed (purged errors)
[2025-02-25 13:10:39] 2025-02-25 18:10:20,665 | INFO     | overall cleanup function is called
[2025-02-25 13:10:39] 2025-02-25 18:10:21,673 | INFO     | --- collectZombieJob: --- 10, [3365377]
[2025-02-25 13:10:39] 2025-02-25 18:10:21,674 | INFO     | zombie collector waiting for pid 3365377
[2025-02-25 13:10:39] 2025-02-25 18:10:21,674 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 13:10:39] 2025-02-25 18:10:21,674 | INFO     | collected zombie processes
[2025-02-25 13:10:39] 2025-02-25 18:10:21,674 | INFO     | will attempt to kill all subprocesses of pid=3365377
[2025-02-25 13:10:39] 2025-02-25 18:10:21,824 | INFO     | process IDs to be killed: [3365377] (in reverse order)
[2025-02-25 13:10:39] 2025-02-25 18:10:21,911 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 13:10:39] 2025-02-25 18:10:21,912 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 13:10:39] 2025-02-25 18:10:21,927 | INFO     | did not find any defunct processes belonging to 3365377
[2025-02-25 13:10:39] 2025-02-25 18:10:21,936 | INFO     | did not find any defunct processes belonging to 3365377
[2025-02-25 13:10:39] 2025-02-25 18:10:21,937 | INFO     | ready for new job
[2025-02-25 13:10:39] 2025-02-25 18:10:21,937 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 13:10:39] 2025-02-25 18:10:21,938 | INFO     | **************************************
[2025-02-25 13:10:39] 2025-02-25 18:10:21,938 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 13:10:39] 2025-02-25 18:10:21,938 | INFO     | **************************************
[2025-02-25 13:10:39] 2025-02-25 18:10:21,938 | INFO     | 
[2025-02-25 13:10:39] 2025-02-25 18:10:21,952 | INFO     | architecture information:
[2025-02-25 13:10:39] 2025-02-25 18:10:21,952 | INFO     | executing command: cat /etc/os-release
[2025-02-25 13:10:39] 2025-02-25 18:10:21,968 | INFO     | cat /etc/os-release:
[2025-02-25 13:10:39] NAME="CentOS Linux"
[2025-02-25 13:10:39] VERSION="7 (Core)"
[2025-02-25 13:10:39] ID="centos"
[2025-02-25 13:10:39] ID_LIKE="rhel fedora"
[2025-02-25 13:10:39] VERSION_ID="7"
[2025-02-25 13:10:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 13:10:39] ANSI_COLOR="0;31"
[2025-02-25 13:10:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 13:10:39] HOME_URL="https://www.centos.org/"
[2025-02-25 13:10:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 13:10:39] 
[2025-02-25 13:10:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 13:10:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 13:10:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 13:10:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 13:10:39] 
[2025-02-25 13:10:39] 2025-02-25 18:10:21,969 | INFO     | **************************************
[2025-02-25 13:10:39] 2025-02-25 18:10:22,472 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-02-25 13:10:39] 2025-02-25 18:10:22,493 | INFO     | sufficient remaining disk space (75211210752 B)
[2025-02-25 13:10:39] 2025-02-25 18:10:22,494 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 13:10:39] 2025-02-25 18:10:22,494 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 13:10:39] 2025-02-25 18:10:22,495 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 13:10:39] 2025-02-25 18:10:22,495 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 13:10:39] 2025-02-25 18:10:22,496 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 13:10:39] 2025-02-25 18:10:22,496 | INFO     | aborting loop
[2025-02-25 13:10:39] 2025-02-25 18:10:22,625 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 13:10:39] 2025-02-25 18:10:22,625 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 13:10:39] 2025-02-25 18:10:22,626 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 13:10:39] 2025-02-25 18:10:22,803 | INFO     | all data control threads have been joined
[2025-02-25 13:10:39] 2025-02-25 18:10:22,912 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 13:10:39] 2025-02-25 18:10:23,056 | INFO     | all payload control threads have been joined
[2025-02-25 13:10:39] 2025-02-25 18:10:23,500 | INFO     | [job] retrieve thread has finished
[2025-02-25 13:10:39] 2025-02-25 18:10:23,502 | INFO     | [job] queue monitor thread has finished
[2025-02-25 13:10:39] 2025-02-25 18:10:23,502 | INFO     | [job] job monitor thread has finished
[2025-02-25 13:10:39] 2025-02-25 18:10:23,600 | INFO     | [payload] failed_post thread has finished
[2025-02-25 13:10:39] 2025-02-25 18:10:23,804 | INFO     | [data] control thread has finished
[2025-02-25 13:10:39] 2025-02-25 18:10:23,860 | INFO     | all job control threads have been joined
[2025-02-25 13:10:39] 2025-02-25 18:10:24,058 | INFO     | [payload] control thread has finished
[2025-02-25 13:10:39] 2025-02-25 18:10:24,479 | INFO     | [payload] validate_post thread has finished
[2025-02-25 13:10:39] 2025-02-25 18:10:24,501 | INFO     | [data] copytool_out thread has finished
[2025-02-25 13:10:39] 2025-02-25 18:10:24,522 | INFO     | [job] validate thread has finished
[2025-02-25 13:10:39] 2025-02-25 18:10:24,566 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 13:10:39] 2025-02-25 18:10:24,577 | INFO     | [data] copytool_in thread has finished
[2025-02-25 13:10:39] 2025-02-25 18:10:24,866 | INFO     | [job] control thread has finished
[2025-02-25 13:10:39] 2025-02-25 18:10:24,885 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 13:10:39] 2025-02-25 18:10:24,932 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 13:10:39] 2025-02-25 18:10:26,918 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 13:10:39] 2025-02-25 18:10:32,891 | INFO     | job.realtimelogging is not enabled
[2025-02-25 13:10:39] 2025-02-25 18:10:33,896 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 13:10:39] 2025-02-25 18:10:34,379 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139799523379008)>', '<ExcThread(monitor, started 139798903781120)>']
[2025-02-25 13:10:39] 2025-02-25 18:10:34,677 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 13:10:39] 2025-02-25 18:10:34,677 | INFO     | [monitor] control thread has ended
[2025-02-25 13:10:39] 2025-02-25 18:10:39,390 | INFO     | all workflow threads have been joined
[2025-02-25 13:10:39] 2025-02-25 18:10:39,391 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 13:10:39] 2025-02-25 18:10:39,392 | INFO     | traces error code: 0
[2025-02-25 13:10:39] 2025-02-25 18:10:39,392 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 13:10:39] 2025-02-25 18:10:39,521 [wrapper] ==== pilot stdout END ====
[2025-02-25 13:10:39] 2025-02-25 18:10:39,525 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 13:10:39] 2025-02-25 18:10:39,530 [wrapper] pilotpid: 3356415
[2025-02-25 13:10:39] 2025-02-25 18:10:39,533 [wrapper] Pilot exit status: 0
[2025-02-25 13:10:39] 2025-02-25 18:10:39,547 [wrapper] pandaids: 6530459146
[2025-02-25 13:10:39] 2025-02-25 18:10:39,607 [wrapper] cleanup supervisor_pilot 3647205 3356416
[2025-02-25 13:10:39] 2025-02-25 18:10:39,610 [wrapper] Test setup, not cleaning
[2025-02-25 13:10:39] 2025-02-25 18:10:39,619 [wrapper] apfmon messages muted
[2025-02-25 13:10:39] 2025-02-25 18:10:39,623 [wrapper] ==== wrapper stdout END ====
[2025-02-25 13:10:39] 2025-02-25 18:10:39,627 [wrapper] ==== wrapper stderr END ====
[2025-02-25 13:10:39]  *** Error codes and diagnostics ***
[2025-02-25 13:10:39]     "exeErrorCode": 0,
[2025-02-25 13:10:39]     "exeErrorDiag": "",
[2025-02-25 13:10:39]     "pilotErrorCode": 0,
[2025-02-25 13:10:39]     "pilotErrorDiag": "",
[2025-02-25 13:10:39]  *** Listing of results directory ***
[2025-02-25 13:10:39] total 434608
[2025-02-25 13:10:39] -rw-r--r--. 1 boincer umatlas    491065 Feb 25 09:02 pilot3.tar.gz
[2025-02-25 13:10:39] -rw-r--r--. 1 boincer umatlas      5118 Feb 25 09:44 queuedata.json
[2025-02-25 13:10:39] -rwx------. 1 boincer umatlas     35865 Feb 25 09:44 runpilot2-wrapper.sh
[2025-02-25 13:10:39] -rw-r--r--. 1 boincer umatlas       100 Feb 25 12:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 13:10:39] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 25 12:00 run_atlas
[2025-02-25 13:10:39] -rw-r--r--. 1 boincer umatlas       105 Feb 25 12:00 job.xml
[2025-02-25 13:10:39] -rw-r--r--. 2 boincer umatlas 253737053 Feb 25 12:00 EVNT.43401119._000074.pool.root.1
[2025-02-25 13:10:39] -rw-r--r--. 2 boincer umatlas     17569 Feb 25 12:00 start_atlas.sh
[2025-02-25 13:10:39] drwxrwx--x. 2 boincer umatlas      4096 Feb 25 12:00 shared
[2025-02-25 13:10:39] -rw-r--r--. 2 boincer umatlas    503556 Feb 25 12:00 input.tar.gz
[2025-02-25 13:10:39] -rw-r--r--. 1 boincer umatlas         0 Feb 25 12:00 boinc_lockfile
[2025-02-25 13:10:39] -rw-r--r--. 1 boincer umatlas      2541 Feb 25 12:00 pandaJob.out
[2025-02-25 13:10:39] -rw-------. 1 boincer umatlas       467 Feb 25 12:00 setup.sh.local
[2025-02-25 13:10:39] -rw-------. 1 boincer umatlas    988282 Feb 25 12:00 agis_schedconf.cvmfs.json
[2025-02-25 13:10:39] -rw-------. 1 boincer umatlas   1577983 Feb 25 12:01 agis_ddmendpoints.agis.ALL.json
[2025-02-25 13:10:39] drwx------. 4 boincer umatlas      4096 Feb 25 12:01 pilot3
[2025-02-25 13:10:39] -rw-r--r--. 1 boincer umatlas      6840 Feb 25 13:04 init_data.xml
[2025-02-25 13:10:39] -rw-r--r--. 1 boincer umatlas       529 Feb 25 13:09 boinc_task_state.xml
[2025-02-25 13:10:39] -rw-------. 1 boincer umatlas 186028556 Feb 25 13:09 HITS.43401121._001840.pool.root.1
[2025-02-25 13:10:39] -rw-------. 1 boincer umatlas      1039 Feb 25 13:10 memory_monitor_summary.json
[2025-02-25 13:10:39] -rw-------. 1 boincer umatlas    313034 Feb 25 13:10 log.43401121._001840.job.log.tgz.1
[2025-02-25 13:10:39] -rw-------. 1 boincer umatlas        95 Feb 25 13:10 pilot_heartbeat.json
[2025-02-25 13:10:39] -rw-------. 1 boincer umatlas      7732 Feb 25 13:10 heartbeat.json
[2025-02-25 13:10:39] -rw-r--r--. 1 boincer umatlas      8192 Feb 25 13:10 boinc_mmap_file
[2025-02-25 13:10:39] -rw-r--r--. 1 boincer umatlas        27 Feb 25 13:10 wrapper_checkpoint.txt
[2025-02-25 13:10:39] -rw-------. 1 boincer umatlas      4287 Feb 25 13:10 pilotlog.txt
[2025-02-25 13:10:39] -rw-------. 1 boincer umatlas    421009 Feb 25 13:10 log.43401121._001840.job.log.1
[2025-02-25 13:10:39] -rw-------. 1 boincer umatlas       357 Feb 25 13:10 output.list
[2025-02-25 13:10:39] -rw-r--r--. 1 boincer umatlas       620 Feb 25 13:10 runtime_log
[2025-02-25 13:10:39] -rw-------. 1 boincer umatlas    757760 Feb 25 13:10 result.tar.gz
[2025-02-25 13:10:39] -rw-------. 1 boincer umatlas       652 Feb 25 13:10 vkfKDmMLB76n9Rq4apOajLDm4fhM0noT9bVoFjIUDmOxfKDmrsCNOo.diag
[2025-02-25 13:10:39] -rw-r--r--. 1 boincer umatlas     11423 Feb 25 13:10 runtime_log.err
[2025-02-25 13:10:39] -rw-r--r--. 1 boincer umatlas     21975 Feb 25 13:10 stderr.txt
[2025-02-25 13:10:39] HITS file was successfully produced:
[2025-02-25 13:10:39] -rw-------. 1 boincer umatlas 186028556 Feb 25 13:09 shared/HITS.pool.root.1
[2025-02-25 13:10:39]  *** Contents of shared directory: ***
[2025-02-25 13:10:39] total 430720
[2025-02-25 13:10:39] -rw-r--r--. 2 boincer umatlas 253737053 Feb 25 12:00 ATLAS.root_0
[2025-02-25 13:10:39] -rw-r--r--. 2 boincer umatlas     17569 Feb 25 12:00 start_atlas.sh
[2025-02-25 13:10:39] -rw-r--r--. 2 boincer umatlas    503556 Feb 25 12:00 input.tar.gz
[2025-02-25 13:10:39] -rw-------. 1 boincer umatlas 186028556 Feb 25 13:09 HITS.pool.root.1
[2025-02-25 13:10:39] -rw-------. 1 boincer umatlas    757760 Feb 25 13:10 result.tar.gz
13:10:41 (3352703): run_atlas exited; CPU time 29571.740095
13:10:41 (3352703): called boinc_finish(0)

</stderr_txt>
]]>

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