Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:40:00 (326275): wrapper (7.7.26015): starting
12:40:00 (326275): wrapper: running run_atlas (--nthreads 9)
[2025-02-25 12:40:00] Arguments: --nthreads 9
[2025-02-25 12:40:00] Threads: 9
[2025-02-25 12:40:00] Checking for CVMFS
[2025-02-25 12:40:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 12:40:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 12:40:01] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 12:40:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 12:40:01] 2.11.5.0 1327680 59057 258740 143047 2 113 22556769 37641217 15451 130560 0 2312815 98.657 7169742 43214 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-02-25 12:40:01] CVMFS is ok
[2025-02-25 12:40:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 12:40:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 12:40:01] Further information can be found at the LHC@home message board.
[2025-02-25 12:40:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 12:40:01] Checking for apptainer binary...
[2025-02-25 12:40:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 12:40:01] Running /usr/bin/apptainer --version
[2025-02-25 12:40:01] apptainer version 1.3.6-1.el9
[2025-02-25 12:40:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 12:40:01] c6-5-37-2.aglt2.org
[2025-02-25 12:40:01] apptainer works
[2025-02-25 12:40:01] Set ATHENA_PROC_NUMBER=9
[2025-02-25 12:40:01] Set ATHENA_CORE_NUMBER=9
[2025-02-25 12:40:01] Starting ATLAS job with PandaID=6530459124
[2025-02-25 12:40:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 14:03:40]  *** The last 200 lines of the pilot log: ***
[2025-02-25 14:03:40]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-25 14:03:40]  replicas=None
[2025-02-25 14:03:40]  scope=mc23_13p6TeV
[2025-02-25 14:03:40]  status=None
[2025-02-25 14:03:40]  status_code=0
[2025-02-25 14:03:40]  storage_token=
[2025-02-25 14:03:40]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6530459124/log.43401121._001818.job.log.tgz.1
[2025-02-25 14:03:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9a/8e/log.43401121._001818.job.log.tgz.1
[2025-02-25 14:03:40]  workdir=None
[2025-02-25 14:03:40] ]
[2025-02-25 14:03:40] 2025-02-25 19:03:12,923 | INFO     | transferring file log.43401121._001818.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6530459124/log.43401121._001818.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-02-25 14:03:40] 2025-02-25 19:03:12,923 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6530459124/log.43401121._001818.job.log.tgz.1 /tmp/boinchome/slots/0/log.43401121._001818.job
[2025-02-25 14:03:40] 2025-02-25 19:03:12,966 | INFO     | adding to output.list: log.43401121._001818.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9a/8e/log.43401121._001818.job.log.tg
[2025-02-25 14:03:40] 2025-02-25 19:03:12,967 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-25 14:03:40] 2025-02-25 19:03:12,967 | INFO     | summary of transferred files:
[2025-02-25 14:03:40] 2025-02-25 19:03:12,967 | INFO     |  -- lfn=log.43401121._001818.job.log.tgz.1, status_code=0, status=transferred
[2025-02-25 14:03:40] 2025-02-25 19:03:12,967 | INFO     | stage-out finished correctly
[2025-02-25 14:03:40] 2025-02-25 19:03:14,588 | INFO     | monitor loop #375: job 0:6530459124 is in state 'finished'
[2025-02-25 14:03:40] 2025-02-25 19:03:14,588 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 14:03:40] 2025-02-25 19:03:14,852 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-25 14:03:40] 2025-02-25 19:03:17,101 | INFO     | monitor loop #376: job 0:6530459124 is in state 'finished'
[2025-02-25 14:03:40] 2025-02-25 19:03:17,101 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 14:03:40] 2025-02-25 19:03:17,776 | INFO     | job 6530459124 has state=finished
[2025-02-25 14:03:40] 2025-02-25 19:03:17,776 | INFO     | preparing for final server update for job 6530459124 in state='finished'
[2025-02-25 14:03:40] 2025-02-25 19:03:17,880 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-02-25 14:03:40] 2025-02-25 19:03:17,880 | INFO     | this job has now completed (state=finished)
[2025-02-25 14:03:40] 2025-02-25 19:03:17,881 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-25 14:03:40] 2025-02-25 19:03:17,881 | INFO     | log transfer has been attempted: DONE
[2025-02-25 14:03:40] 2025-02-25 19:03:17,881 | INFO     | job 6530459124 has finished - writing final server update
[2025-02-25 14:03:40] 2025-02-25 19:03:17,881 | INFO     | total number of processed events: 400 (read)
[2025-02-25 14:03:40] 2025-02-25 19:03:17,920 | INFO     | executing command: lscpu
[2025-02-25 14:03:40] 2025-02-25 19:03:17,971 | INFO     | PID=329975 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-02-25 14:03:40] 2025-02-25 19:03:17,972 | INFO     | .. there are 17 such processes running
[2025-02-25 14:03:40] 2025-02-25 19:03:18,020 | INFO     | found 28 cores (14 cores per socket, 2 sockets)
[2025-02-25 14:03:40] 2025-02-25 19:03:18,055 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-25 14:03:40] 2025-02-25 19:03:19,611 | INFO     | monitor loop #377: job 0:6530459124 is in state 'finished'
[2025-02-25 14:03:40] 2025-02-25 19:03:19,611 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 14:03:40] 2025-02-25 19:03:22,116 | INFO     | monitor loop #378: job 0:6530459124 is in state 'finished'
[2025-02-25 14:03:40] 2025-02-25 19:03:22,116 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 14:03:40] 2025-02-25 19:03:24,629 | INFO     | CPU arch script returned: x86-64-v4
[2025-02-25 14:03:40] 2025-02-25 19:03:24,629 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6530459124/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 14:03:40] 2025-02-25 19:03:24,630 | INFO     | extracted standard info from prmon json
[2025-02-25 14:03:40] 2025-02-25 19:03:24,630 | INFO     | extracted standard memory fields from prmon json
[2025-02-25 14:03:40] 2025-02-25 19:03:24,631 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-25 14:03:40] 2025-02-25 19:03:24,631 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 14:03:40] 2025-02-25 19:03:24,631 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 14:03:40] 2025-02-25 19:03:24,633 | INFO     | fitting pss+swap vs Time
[2025-02-25 14:03:40] 2025-02-25 19:03:24,633 | INFO     | model: linear, x: [1740505543.0, 1740505604.0, 1740505665.0, 1740505726.0, 1740505787.0, 1740505848.0, 1740505909.0, 1740505970.0, 1740506031.0, 1740506092.0, 1740
[2025-02-25 14:03:40] 2025-02-25 19:03:24,634 | INFO     | sum of square deviations: 130793150.0
[2025-02-25 14:03:40] 2025-02-25 19:03:24,634 | INFO     | sum of deviations: 10701435265.0
[2025-02-25 14:03:40] 2025-02-25 19:03:24,634 | INFO     | mean x: 1740507800.0
[2025-02-25 14:03:40] 2025-02-25 19:03:24,634 | INFO     | mean y: 2208767.4
[2025-02-25 14:03:40] 2025-02-25 19:03:24,634 | INFO     | -- intersect: -142405337422.34744
[2025-02-25 14:03:40] 2025-02-25 19:03:24,634 | INFO     | intersect: -142405337422.34744
[2025-02-25 14:03:40] 2025-02-25 19:03:24,634 | INFO     | chi2: 1.6880621401066387
[2025-02-25 14:03:40] 2025-02-25 19:03:24,635 | INFO     | -- intersect: -142405337422.34744
[2025-02-25 14:03:40] 2025-02-25 19:03:24,635 | INFO     | current memory leak: 81.82 B/s (using 75 data points, chi2=1.69)
[2025-02-25 14:03:40] 2025-02-25 19:03:24,635 | INFO     | ..............................
[2025-02-25 14:03:40] 2025-02-25 19:03:24,635 | INFO     | . Timing measurements:
[2025-02-25 14:03:40] 2025-02-25 19:03:24,635 | INFO     | . get job = 0 s
[2025-02-25 14:03:40] 2025-02-25 19:03:24,635 | INFO     | . initial setup = 2 s
[2025-02-25 14:03:40] 2025-02-25 19:03:24,635 | INFO     | . payload setup = 5 s
[2025-02-25 14:03:40] 2025-02-25 19:03:24,636 | INFO     | . stage-in = 0 s
[2025-02-25 14:03:40] 2025-02-25 19:03:24,636 | INFO     | . payload execution = 4955 s
[2025-02-25 14:03:40] 2025-02-25 19:03:24,636 | INFO     | . stage-out = 1 s
[2025-02-25 14:03:40] 2025-02-25 19:03:24,636 | INFO     | . log creation = 0 s
[2025-02-25 14:03:40] 2025-02-25 19:03:24,636 | INFO     | ..............................
[2025-02-25 14:03:40] 2025-02-25 19:03:24,722 | INFO     | 
[2025-02-25 14:03:40] 2025-02-25 19:03:24,723 | INFO     | job summary report
[2025-02-25 14:03:40] 2025-02-25 19:03:24,723 | INFO     | --------------------------------------------------
[2025-02-25 14:03:40] 2025-02-25 19:03:24,723 | INFO     | PanDA job id: 6530459124
[2025-02-25 14:03:40] 2025-02-25 19:03:24,723 | INFO     | task id: 43401121
[2025-02-25 14:03:40] 2025-02-25 19:03:24,723 | INFO     | errors: (none)
[2025-02-25 14:03:40] 2025-02-25 19:03:24,723 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 14:03:40] 2025-02-25 19:03:24,723 | INFO     | pilot state: finished 
[2025-02-25 14:03:40] 2025-02-25 19:03:24,723 | INFO     | transexitcode: 0
[2025-02-25 14:03:40] 2025-02-25 19:03:24,724 | INFO     | exeerrorcode: 0
[2025-02-25 14:03:40] 2025-02-25 19:03:24,724 | INFO     | exeerrordiag: 
[2025-02-25 14:03:40] 2025-02-25 19:03:24,724 | INFO     | exitcode: 0
[2025-02-25 14:03:40] 2025-02-25 19:03:24,724 | INFO     | exitmsg: OK
[2025-02-25 14:03:40] 2025-02-25 19:03:24,724 | INFO     | cpuconsumptiontime: 33420 s
[2025-02-25 14:03:40] 2025-02-25 19:03:24,724 | INFO     | nevents: 400
[2025-02-25 14:03:40] 2025-02-25 19:03:24,724 | INFO     | neventsw: 0
[2025-02-25 14:03:40] 2025-02-25 19:03:24,724 | INFO     | pid: 336907
[2025-02-25 14:03:40] 2025-02-25 19:03:24,724 | INFO     | pgrp: 336907
[2025-02-25 14:03:40] 2025-02-25 19:03:24,724 | INFO     | corecount: 9
[2025-02-25 14:03:40] 2025-02-25 19:03:24,724 | INFO     | event service: False
[2025-02-25 14:03:40] 2025-02-25 19:03:24,724 | INFO     | sizes: {0: 2376716, 1: 2376971, 5: 2377177, 12: 2377233, 4965: 2403342, 4966: 2412283, 4968: 2412467, 4978: 2412637}
[2025-02-25 14:03:40] 2025-02-25 19:03:24,725 | INFO     | --------------------------------------------------
[2025-02-25 14:03:40] 2025-02-25 19:03:24,725 | INFO     | 
[2025-02-25 14:03:40] 2025-02-25 19:03:24,725 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-25 14:03:40] 2025-02-25 19:03:24,775 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 14:03:40] 2025-02-25 19:03:24,775 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 14:03:40] 2025-02-25 19:03:24,775 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 14:03:40] 2025-02-25 19:03:24,775 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 14:03:40] 2025-02-25 19:03:24,776 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 14:03:40] 2025-02-25 19:03:24,776 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 14:03:40] 2025-02-25 19:03:24,776 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 14:03:40] 2025-02-25 19:03:24,776 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 14:03:40] 2025-02-25 19:03:24,776 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 14:03:40] 2025-02-25 19:03:24,776 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 14:03:40] 2025-02-25 19:03:24,776 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 14:03:40] 2025-02-25 19:03:24,776 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 14:03:40] 2025-02-25 19:03:24,776 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 14:03:40] 2025-02-25 19:03:24,776 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 14:03:40] 2025-02-25 19:03:24,776 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 14:03:40] 2025-02-25 19:03:24,776 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 14:03:40] 2025-02-25 19:03:24,776 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 14:03:40] 2025-02-25 19:03:24,776 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 14:03:40] 2025-02-25 19:03:24,776 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 14:03:40] 2025-02-25 19:03:24,777 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 14:03:40] 2025-02-25 19:03:24,777 | INFO     | job 6530459124 has completed (purged errors)
[2025-02-25 14:03:40] 2025-02-25 19:03:24,777 | INFO     | overall cleanup function is called
[2025-02-25 14:03:40] 2025-02-25 19:03:25,789 | INFO     | --- collectZombieJob: --- 10, [336907]
[2025-02-25 14:03:40] 2025-02-25 19:03:25,789 | INFO     | zombie collector waiting for pid 336907
[2025-02-25 14:03:40] 2025-02-25 19:03:25,789 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 14:03:40] 2025-02-25 19:03:25,789 | INFO     | collected zombie processes
[2025-02-25 14:03:40] 2025-02-25 19:03:25,789 | INFO     | will attempt to kill all subprocesses of pid=336907
[2025-02-25 14:03:40] 2025-02-25 19:03:26,080 | INFO     | process IDs to be killed: [336907] (in reverse order)
[2025-02-25 14:03:40] 2025-02-25 19:03:26,255 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 14:03:40] 2025-02-25 19:03:26,260 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 14:03:40] 2025-02-25 19:03:26,271 | INFO     | did not find any defunct processes belonging to 336907
[2025-02-25 14:03:40] 2025-02-25 19:03:26,281 | INFO     | did not find any defunct processes belonging to 336907
[2025-02-25 14:03:40] 2025-02-25 19:03:26,281 | INFO     | ready for new job
[2025-02-25 14:03:40] 2025-02-25 19:03:26,281 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 14:03:40] 2025-02-25 19:03:26,283 | INFO     | **************************************
[2025-02-25 14:03:40] 2025-02-25 19:03:26,283 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 14:03:40] 2025-02-25 19:03:26,283 | INFO     | **************************************
[2025-02-25 14:03:40] 2025-02-25 19:03:26,283 | INFO     | 
[2025-02-25 14:03:40] 2025-02-25 19:03:26,299 | INFO     | architecture information:
[2025-02-25 14:03:40] 2025-02-25 19:03:26,300 | INFO     | executing command: cat /etc/os-release
[2025-02-25 14:03:40] 2025-02-25 19:03:26,315 | INFO     | cat /etc/os-release:
[2025-02-25 14:03:40] NAME="CentOS Linux"
[2025-02-25 14:03:40] VERSION="7 (Core)"
[2025-02-25 14:03:40] ID="centos"
[2025-02-25 14:03:40] ID_LIKE="rhel fedora"
[2025-02-25 14:03:40] VERSION_ID="7"
[2025-02-25 14:03:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 14:03:40] ANSI_COLOR="0;31"
[2025-02-25 14:03:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 14:03:40] HOME_URL="https://www.centos.org/"
[2025-02-25 14:03:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 14:03:40] 
[2025-02-25 14:03:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 14:03:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 14:03:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 14:03:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 14:03:40] 
[2025-02-25 14:03:40] 2025-02-25 19:03:26,316 | INFO     | **************************************
[2025-02-25 14:03:40] 2025-02-25 19:03:26,820 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-25 14:03:40] 2025-02-25 19:03:26,838 | INFO     | sufficient remaining disk space (75018272768 B)
[2025-02-25 14:03:40] 2025-02-25 19:03:26,838 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 14:03:40] 2025-02-25 19:03:26,838 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 14:03:40] 2025-02-25 19:03:26,839 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-25 14:03:40] 2025-02-25 19:03:26,839 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 14:03:40] 2025-02-25 19:03:26,839 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 14:03:40] 2025-02-25 19:03:26,839 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 14:03:40] 2025-02-25 19:03:26,839 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 14:03:40] 2025-02-25 19:03:27,009 | INFO     | all data control threads have been joined
[2025-02-25 14:03:40] 2025-02-25 19:03:27,169 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-02-25 14:03:40] 2025-02-25 19:03:27,169 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-02-25 14:03:40] 2025-02-25 19:03:27,170 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 14:03:40] 2025-02-25 19:03:27,170 | INFO     | will abort loop
[2025-02-25 14:03:40] 2025-02-25 19:03:27,375 | INFO     | all payload control threads have been joined
[2025-02-25 14:03:40] 2025-02-25 19:03:27,844 | INFO     | [job] retrieve thread has finished
[2025-02-25 14:03:40] 2025-02-25 19:03:27,896 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 14:03:40] 2025-02-25 19:03:27,956 | INFO     | all job control threads have been joined
[2025-02-25 14:03:40] 2025-02-25 19:03:28,015 | INFO     | [data] control thread has finished
[2025-02-25 14:03:40] 2025-02-25 19:03:28,175 | INFO     | [job] job monitor thread has finished
[2025-02-25 14:03:40] 2025-02-25 19:03:28,380 | INFO     | [payload] control thread has finished
[2025-02-25 14:03:40] 2025-02-25 19:03:28,615 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 14:03:40] 2025-02-25 19:03:28,652 | INFO     | [payload] failed_post thread has finished
[2025-02-25 14:03:40] 2025-02-25 19:03:28,689 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 14:03:40] 2025-02-25 19:03:28,815 | INFO     | [job] validate thread has finished
[2025-02-25 14:03:40] 2025-02-25 19:03:28,847 | INFO     | [data] copytool_out thread has finished
[2025-02-25 14:03:40] 2025-02-25 19:03:28,852 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 14:03:40] 2025-02-25 19:03:28,921 | INFO     | [payload] validate_post thread has finished
[2025-02-25 14:03:40] 2025-02-25 19:03:28,963 | INFO     | [job] control thread has finished
[2025-02-25 14:03:40] 2025-02-25 19:03:28,965 | INFO     | [data] copytool_in thread has finished
[2025-02-25 14:03:40] 2025-02-25 19:03:29,737 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 14:03:40] 2025-02-25 19:03:29,967 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 14:03:40] 2025-02-25 19:03:30,742 | INFO     | [job] queue monitor thread has finished
[2025-02-25 14:03:40] 2025-02-25 19:03:33,982 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 14:03:40] 2025-02-25 19:03:35,251 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140080266217280)>', '<ExcThread(monitor, started 140079477548800)>']
[2025-02-25 14:03:40] 2025-02-25 19:03:35,917 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 14:03:40] 2025-02-25 19:03:35,929 | INFO     | [monitor] control thread has ended
[2025-02-25 14:03:40] 2025-02-25 19:03:40,276 | INFO     | all workflow threads have been joined
[2025-02-25 14:03:40] 2025-02-25 19:03:40,276 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 14:03:40] 2025-02-25 19:03:40,276 | INFO     | traces error code: 0
[2025-02-25 14:03:40] 2025-02-25 19:03:40,277 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 14:03:40] 2025-02-25 19:03:40,448 [wrapper] ==== pilot stdout END ====
[2025-02-25 14:03:40] 2025-02-25 19:03:40,451 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 14:03:40] 2025-02-25 19:03:40,453 [wrapper] pilotpid: 329975
[2025-02-25 14:03:40] 2025-02-25 19:03:40,456 [wrapper] Pilot exit status: 0
[2025-02-25 14:03:40] 2025-02-25 19:03:40,468 [wrapper] pandaids: 6530459124
[2025-02-25 14:03:40] 2025-02-25 19:03:40,524 [wrapper] cleanup supervisor_pilot  573465 329976
[2025-02-25 14:03:40] 2025-02-25 19:03:40,527 [wrapper] Test setup, not cleaning
[2025-02-25 14:03:40] 2025-02-25 19:03:40,537 [wrapper] apfmon messages muted
[2025-02-25 14:03:40] 2025-02-25 19:03:40,540 [wrapper] ==== wrapper stdout END ====
[2025-02-25 14:03:40] 2025-02-25 19:03:40,542 [wrapper] ==== wrapper stderr END ====
[2025-02-25 14:03:40]  *** Error codes and diagnostics ***
[2025-02-25 14:03:40]     "exeErrorCode": 0,
[2025-02-25 14:03:40]     "exeErrorDiag": "",
[2025-02-25 14:03:40]     "pilotErrorCode": 0,
[2025-02-25 14:03:40]     "pilotErrorDiag": "",
[2025-02-25 14:03:40]  *** Listing of results directory ***
[2025-02-25 14:03:40] total 427356
[2025-02-25 14:03:40] -rw-r--r--. 1 boincer umatlas    491065 Feb 25 09:02 pilot3.tar.gz
[2025-02-25 14:03:40] -rw-r--r--. 1 boincer umatlas      5118 Feb 25 09:44 queuedata.json
[2025-02-25 14:03:40] -rwx------. 1 boincer umatlas     35865 Feb 25 09:44 runpilot2-wrapper.sh
[2025-02-25 14:03:40] -rw-r--r--. 1 boincer umatlas       100 Feb 25 12:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 14:03:40] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 25 12:40 run_atlas
[2025-02-25 14:03:40] -rw-r--r--. 1 boincer umatlas       105 Feb 25 12:40 job.xml
[2025-02-25 14:03:40] -rw-r--r--. 2 boincer umatlas 249722294 Feb 25 12:40 EVNT.43401119._000073.pool.root.1
[2025-02-25 14:03:40] -rw-r--r--. 2 boincer umatlas     17569 Feb 25 12:40 start_atlas.sh
[2025-02-25 14:03:40] drwxrwx--x. 2 boincer umatlas      4096 Feb 25 12:40 shared
[2025-02-25 14:03:40] -rw-r--r--. 2 boincer umatlas    503558 Feb 25 12:40 input.tar.gz
[2025-02-25 14:03:40] -rw-r--r--. 1 boincer umatlas         0 Feb 25 12:40 boinc_lockfile
[2025-02-25 14:03:40] -rw-r--r--. 1 boincer umatlas      2541 Feb 25 12:40 pandaJob.out
[2025-02-25 14:03:40] -rw-------. 1 boincer umatlas       467 Feb 25 12:40 setup.sh.local
[2025-02-25 14:03:40] -rw-------. 1 boincer umatlas    988274 Feb 25 12:40 agis_schedconf.cvmfs.json
[2025-02-25 14:03:40] -rw-------. 1 boincer umatlas   1577983 Feb 25 12:40 agis_ddmendpoints.agis.ALL.json
[2025-02-25 14:03:40] drwx------. 4 boincer umatlas      4096 Feb 25 12:40 pilot3
[2025-02-25 14:03:40] -rw-------. 1 boincer umatlas 182449499 Feb 25 14:02 HITS.43401121._001818.pool.root.1
[2025-02-25 14:03:40] -rw-r--r--. 1 boincer umatlas       529 Feb 25 14:02 boinc_task_state.xml
[2025-02-25 14:03:40] -rw-------. 1 boincer umatlas        95 Feb 25 14:02 pilot_heartbeat.json
[2025-02-25 14:03:40] -rw-------. 1 boincer umatlas      1036 Feb 25 14:03 memory_monitor_summary.json
[2025-02-25 14:03:40] -rw-------. 1 boincer umatlas    326927 Feb 25 14:03 log.43401121._001818.job.log.tgz.1
[2025-02-25 14:03:40] -rw-r--r--. 1 boincer umatlas      6841 Feb 25 14:03 init_data.xml
[2025-02-25 14:03:40] -rw-------. 1 boincer umatlas      7731 Feb 25 14:03 heartbeat.json
[2025-02-25 14:03:40] -rw-r--r--. 1 boincer umatlas      8192 Feb 25 14:03 boinc_mmap_file
[2025-02-25 14:03:40] -rw-r--r--. 1 boincer umatlas        27 Feb 25 14:03 wrapper_checkpoint.txt
[2025-02-25 14:03:40] -rw-------. 1 boincer umatlas      4524 Feb 25 14:03 pilotlog.txt
[2025-02-25 14:03:40] -rw-------. 1 boincer umatlas    493036 Feb 25 14:03 log.43401121._001818.job.log.1
[2025-02-25 14:03:40] -rw-------. 1 boincer umatlas       357 Feb 25 14:03 output.list
[2025-02-25 14:03:40] -rw-r--r--. 1 boincer umatlas       620 Feb 25 14:03 runtime_log
[2025-02-25 14:03:40] -rw-------. 1 boincer umatlas    839680 Feb 25 14:03 result.tar.gz
[2025-02-25 14:03:40] -rw-r--r--. 1 boincer umatlas     11423 Feb 25 14:03 runtime_log.err
[2025-02-25 14:03:40] -rw-------. 1 boincer umatlas       653 Feb 25 14:03 EI1NDmLLB76n9Rq4apOajLDm4fhM0noT9bVoFjIUDm3wfKDm5unXWn.diag
[2025-02-25 14:03:40] -rw-r--r--. 1 boincer umatlas     22050 Feb 25 14:03 stderr.txt
[2025-02-25 14:03:40] HITS file was successfully produced:
[2025-02-25 14:03:40] -rw-------. 1 boincer umatlas 182449499 Feb 25 14:02 shared/HITS.pool.root.1
[2025-02-25 14:03:40]  *** Contents of shared directory: ***
[2025-02-25 14:03:40] total 423384
[2025-02-25 14:03:40] -rw-r--r--. 2 boincer umatlas 249722294 Feb 25 12:40 ATLAS.root_0
[2025-02-25 14:03:40] -rw-r--r--. 2 boincer umatlas     17569 Feb 25 12:40 start_atlas.sh
[2025-02-25 14:03:40] -rw-r--r--. 2 boincer umatlas    503558 Feb 25 12:40 input.tar.gz
[2025-02-25 14:03:40] -rw-------. 1 boincer umatlas 182449499 Feb 25 14:02 HITS.pool.root.1
[2025-02-25 14:03:40] -rw-------. 1 boincer umatlas    839680 Feb 25 14:03 result.tar.gz
14:03:41 (326275): run_atlas exited; CPU time 33382.250476
14:03:41 (326275): called boinc_finish(0)

</stderr_txt>
]]>

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