Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-25 22:18:51 (22324): Detected: vboxwrapper 26206
2025-02-25 22:18:51 (22324): Detected: BOINC client v7.16.11
2025-02-25 22:18:52 (22324): Detected: VirtualBox VboxManage Interface (Version: 6.1.12)
2025-02-25 22:18:53 (22324): Successfully copied 'init_data.xml' to the shared directory.
2025-02-25 22:18:53 (22324): Create VM. (boinc_667bec139715616d, slot#1)
2025-02-25 22:18:54 (22324): Setting Memory Size for VM. (4600MB)
2025-02-25 22:18:54 (22324): Setting CPU Count for VM. (6)
2025-02-25 22:18:54 (22324): Setting Chipset Options for VM.
2025-02-25 22:18:54 (22324): Setting Graphics Controller Options for VM.
2025-02-25 22:18:55 (22324): Setting Boot Options for VM.
2025-02-25 22:18:55 (22324): Setting Network Configuration for NAT.
2025-02-25 22:18:55 (22324): Enabling VM Network Access.
2025-02-25 22:18:55 (22324): Disabling USB Support for VM.
2025-02-25 22:18:56 (22324): Disabling COM Port Support for VM.
2025-02-25 22:18:56 (22324): Disabling LPT Port Support for VM.
2025-02-25 22:18:56 (22324): Disabling Audio Support for VM.
2025-02-25 22:18:56 (22324): Disabling Clipboard Support for VM.
2025-02-25 22:18:57 (22324): Disabling Drag and Drop Support for VM.
2025-02-25 22:18:57 (22324): Adding storage controller(s) to VM.
2025-02-25 22:18:57 (22324): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-25 22:18:58 (22324): Adding VirtualBox Guest Additions to VM.
2025-02-25 22:18:59 (22324): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-25 22:18:59 (22324): forwarding host port 61427 to guest port 80
2025-02-25 22:18:59 (22324): Enabling remote desktop for VM.
2025-02-25 22:18:59 (22324): Required extension pack not installed, remote desktop not enabled.
2025-02-25 22:18:59 (22324): Enabling shared directory for VM.
2025-02-25 22:19:00 (22324): Starting VM using VBoxManage interface. (boinc_667bec139715616d, slot#1)
2025-02-25 22:19:04 (22324): Successfully started VM. (PID = '9264')
2025-02-25 22:19:04 (22324): Reporting VM Process ID to BOINC.
2025-02-25 22:19:04 (22324): Guest Log: BIOS: VirtualBox 6.1.12
2025-02-25 22:19:04 (22324): Guest Log: CPUID EDX: 0x178bfbff
2025-02-25 22:19:04 (22324): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-25 22:19:04 (22324): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-25 22:19:04 (22324): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-25 22:19:04 (22324): Detected: Web Application Enabled (http://localhost:61427)
2025-02-25 22:19:04 (22324): Preference change detected
2025-02-25 22:19:04 (22324): Setting CPU throttle for VM. (100%)
2025-02-25 22:19:04 (22324): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-25 22:19:06 (22324): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-25 22:19:06 (22324): Guest Log: BIOS: Booting from Hard Disk...
2025-02-25 22:19:09 (22324): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-25 22:19:09 (22324): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-25 22:19:09 (22324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-25 22:19:09 (22324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-25 22:19:09 (22324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-25 22:19:09 (22324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-25 22:19:09 (22324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-25 22:19:09 (22324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-25 22:19:09 (22324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-25 22:19:09 (22324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-25 22:19:09 (22324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-25 22:19:09 (22324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-25 22:19:09 (22324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-25 22:19:09 (22324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-25 22:19:09 (22324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-25 22:19:09 (22324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-25 22:19:09 (22324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-25 22:19:09 (22324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-25 22:19:09 (22324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-25 22:19:09 (22324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-25 22:19:09 (22324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-25 22:19:09 (22324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-25 22:19:09 (22324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-25 22:19:09 (22324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-25 22:19:09 (22324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-25 22:19:09 (22324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-25 22:19:09 (22324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-25 22:19:09 (22324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-25 22:19:09 (22324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-25 22:19:09 (22324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-25 22:19:09 (22324): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-25 22:19:09 (22324): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-25 22:19:17 (22324): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-25 22:19:17 (22324): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-25 22:19:21 (22324): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-25 22:19:21 (22324): Guest Log: 00:00:00.000096 main     Log opened 2025-02-25T22:19:19.357701000Z
2025-02-25 22:19:21 (22324): Guest Log: 00:00:00.000172 main     OS Product: Linux
2025-02-25 22:19:21 (22324): Guest Log: 00:00:00.000193 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-25 22:19:21 (22324): Guest Log: 00:00:00.000211 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-25 22:19:21 (22324): Guest Log: 00:00:00.000228 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-25 22:19:21 (22324): Guest Log: 00:00:00.000229 main     Process ID: 1333
2025-02-25 22:19:21 (22324): Guest Log: 00:00:00.000229 main     Package type: LINUX_64BITS_GENERIC
2025-02-25 22:19:21 (22324): Guest Log: 00:00:00.000728 main     5.2.32 r132073 started. Verbose level = 0
2025-02-25 22:19:21 (22324): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-25 22:19:21 (22324): Guest Log: [INFO] Mounting shared directory
2025-02-25 22:19:21 (22324): Guest Log: [INFO] Checking for init_data.xml
2025-02-25 22:19:25 (22324): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-25 22:19:25 (22324): Guest Log: [INFO] Detected branch: prod
2025-02-25 22:19:25 (22324): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-25 22:19:25 (22324): Guest Log: Copying input files
2025-02-25 22:19:27 (22324): Guest Log: Copied input files into RunAtlas.
2025-02-25 22:19:27 (22324): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-25 22:19:27 (22324): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-25 22:19:27 (22324): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-25 22:19:27 (22324): Guest Log: Further information can be found at the LHC@home message board.
2025-02-25 22:19:31 (22324): Guest Log: 00:00:10.029016 timesync vgsvcTimeSyncWorker: Radical guest time change: 21 611 636 882 000ns (GuestNow=1 740 543 570 996 226 000 ns GuestLast=1 740 521 959 359 344 000 ns fSetTimeLastLoop=true )
2025-02-25 22:19:36 (22324): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-25 22:19:36 (22324): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-25 22:19:36 (22324): Guest Log: 2.6.3.0 1617 0 32200 143062 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-02-25 22:19:36 (22324): Guest Log: copied the webapp to /var/www
2025-02-25 22:19:36 (22324): Guest Log: ATHENA_PROC_NUMBER=6
2025-02-25 22:19:36 (22324): Guest Log: ATHENA_CORE_NUMBER=6
2025-02-25 22:19:36 (22324): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-25 22:19:36 (22324): Guest Log:  *** Starting ATLAS job. (PandaID=6530518459 taskID=43401171) ***
2025-02-25 22:32:24 (22324): VM state change detected. (old = 'running', new = 'paused')
2025-02-25 22:32:33 (22324): VM state change detected. (old = 'paused', new = 'running')
2025-02-25 22:50:25 (22324): VM state change detected. (old = 'running', new = 'paused')
2025-02-25 22:50:35 (22324): VM state change detected. (old = 'paused', new = 'running')
2025-02-25 23:12:17 (22324): VM state change detected. (old = 'running', new = 'paused')
2025-02-25 23:12:27 (22324): VM state change detected. (old = 'paused', new = 'running')
2025-02-25 23:16:48 (22324): VM state change detected. (old = 'running', new = 'paused')
2025-02-25 23:16:58 (22324): VM state change detected. (old = 'paused', new = 'running')
2025-02-25 23:25:48 (22324): VM state change detected. (old = 'running', new = 'paused')
2025-02-25 23:25:59 (22324): VM state change detected. (old = 'paused', new = 'running')
2025-02-25 23:52:06 (22324): Guest Log:  *** Job finished ***
2025-02-25 23:52:06 (22324): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-25 23:52:06 (22324): Guest Log: 2025-02-26 05:51:04,498 | INFO     | [data] queue_monitor thread has finished
2025-02-25 23:52:06 (22324): Guest Log: 2025-02-26 05:51:10,533 | INFO     | job.realtimelogging is not enabled
2025-02-25 23:52:06 (22324): Guest Log: 2025-02-26 05:51:11,562 | INFO     | [payload] run_realtimelog thread has finished
2025-02-25 23:52:06 (22324): Guest Log: 2025-02-26 05:51:13,172 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140399483135808)>', '<ExcThread(monitor, started 140398437586688)>']
2025-02-25 23:52:06 (22324): Guest Log: 2025-02-26 05:51:13,983 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-25 23:52:06 (22324): Guest Log: 2025-02-26 05:51:13,984 | INFO     | [monitor] control thread has ended
2025-02-25 23:52:06 (22324): Guest Log: 2025-02-26 05:51:18,191 | INFO     | all workflow threads have been joined
2025-02-25 23:52:06 (22324): Guest Log: 2025-02-26 05:51:18,191 | INFO     | end of generic workflow (traces error code: 0)
2025-02-25 23:52:06 (22324): Guest Log: 2025-02-26 05:51:18,191 | INFO     | traces error code: 0
2025-02-25 23:52:06 (22324): Guest Log: 2025-02-26 05:51:18,191 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-25 23:52:06 (22324): Guest Log: 2025-02-26 05:51:18,359 [wrapper] ==== pilot stdout END ====
2025-02-25 23:52:06 (22324): Guest Log: 2025-02-26 05:51:18,372 [wrapper] ==== wrapper stdout RESUME ====
2025-02-25 23:52:06 (22324): Guest Log: 2025-02-26 05:51:18,406 [wrapper] pilotpid: 5956
2025-02-25 23:52:06 (22324): Guest Log: 2025-02-26 05:51:18,440 [wrapper] Pilot exit status: 0
2025-02-25 23:52:06 (22324): Guest Log: 2025-02-26 05:51:18,584 [wrapper] pandaids: 6530518459
2025-02-25 23:52:06 (22324): Guest Log: 2025-02-26 05:51:18,621 [wrapper] cleanup supervisor_pilot  2728 5957
2025-02-25 23:52:06 (22324): Guest Log: 2025-02-26 05:51:18,627 [wrapper] Test setup, not cleaning
2025-02-25 23:52:06 (22324): Guest Log: 2025-02-26 05:51:18,634 [wrapper] apfmon messages muted
2025-02-25 23:52:06 (22324): Guest Log: 2025-02-26 05:51:18,639 [wrapper] ==== wrapper stdout END ====
2025-02-25 23:52:06 (22324): Guest Log: 2025-02-26 05:51:18,644 [wrapper] ==== wrapper stderr END ====
2025-02-25 23:52:06 (22324): Guest Log:  *** Error codes and diagnostics ***
2025-02-25 23:52:06 (22324): Guest Log:     "exeErrorCode": 0,
2025-02-25 23:52:06 (22324): Guest Log:     "exeErrorDiag": "",
2025-02-25 23:52:06 (22324): Guest Log:     "pilotErrorCode": 0,
2025-02-25 23:52:06 (22324): Guest Log:     "pilotErrorDiag": "",
2025-02-25 23:52:06 (22324): Guest Log:  *** Listing of results directory ***
2025-02-25 23:52:06 (22324): Guest Log: total 182504
2025-02-25 23:52:06 (22324): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 25 15:18 pilot3.tar.gz
2025-02-25 23:52:06 (22324): Guest Log: -rwx------. 1 atlas atlas     35865 Feb 25 15:36 runpilot2-wrapper.sh
2025-02-25 23:52:06 (22324): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 25 15:36 queuedata.json
2025-02-25 23:52:06 (22324): Guest Log: -rwxr-xr-x. 1 atlas atlas      8884 Feb 26 04:19 init_data.xml
2025-02-25 23:52:06 (22324): Guest Log: -rwxr-xr-x. 1 atlas atlas    503552 Feb 26 04:19 input.tar.gz
2025-02-25 23:52:06 (22324): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb 26 04:19 start_atlas.sh
2025-02-25 23:52:06 (22324): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 26 04:19 EVNT.43401169._000049.pool.root.1 -> /data/./ATLAS.root_0
2025-02-25 23:52:06 (22324): Guest Log: -rw-r--r--. 1 atlas atlas      2543 Feb 26 04:19 pandaJob.out
2025-02-25 23:52:06 (22324): Guest Log: -rw-------. 1 atlas atlas       424 Feb 26 04:19 setup.sh.local
2025-02-25 23:52:06 (22324): Guest Log: -rw-------. 1 atlas atlas    987482 Feb 26 04:20 agis_schedconf.cvmfs.json
2025-02-25 23:52:06 (22324): Guest Log: -rw-------. 1 atlas atlas   1573632 Feb 26 04:20 agis_ddmendpoints.agis.ALL.json
2025-02-25 23:52:06 (22324): Guest Log: drwx------. 4 atlas atlas      4096 Feb 26 04:20 pilot3
2025-02-25 23:52:06 (22324): Guest Log: -rw-------. 1 atlas atlas 181681086 Feb 26 05:50 HITS.43401171._001223.pool.root.1
2025-02-25 23:52:06 (22324): Guest Log: -rw-------. 1 atlas atlas        95 Feb 26 05:50 pilot_heartbeat.json
2025-02-25 23:52:06 (22324): Guest Log: -rw-------. 1 atlas atlas      1022 Feb 26 05:50 memory_monitor_summary.json
2025-02-25 23:52:06 (22324): Guest Log: -rw-------. 1 atlas atlas    283215 Feb 26 05:50 log.43401171._001223.job.log.tgz.1
2025-02-25 23:52:06 (22324): Guest Log: -rw-------. 1 atlas atlas      7703 Feb 26 05:50 heartbeat.json
2025-02-25 23:52:06 (22324): Guest Log: -rw-------. 1 atlas atlas      4347 Feb 26 05:51 pilotlog.txt
2025-02-25 23:52:06 (22324): Guest Log: -rw-------. 1 atlas atlas    450941 Feb 26 05:51 log.43401171._001223.job.log.1
2025-02-25 23:52:06 (22324): Guest Log: -rw-------. 1 atlas atlas       357 Feb 26 05:51 output.list
2025-02-25 23:52:06 (22324): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 26 05:51 runtime_log
2025-02-25 23:52:06 (22324): Guest Log: -rw-------. 1 atlas atlas    757760 Feb 26 05:51 result.tar.gz
2025-02-25 23:52:06 (22324): Guest Log: -rw-r--r--. 1 atlas atlas     10977 Feb 26 05:51 runtime_log.err
2025-02-25 23:52:06 (22324): Guest Log: -rw-------. 1 atlas atlas       665 Feb 26 05:51 bupMDmMAC76nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmQuwKDmTbpnqm.diag
2025-02-25 23:52:06 (22324): Guest Log: Looking for outputfile HITS.43401171._001223.pool.root.1
2025-02-25 23:52:06 (22324): Guest Log: HITS file was successfully produced
2025-02-25 23:52:06 (22324): Guest Log: -rw-------. 1 atlas atlas 181681086 Feb 26 05:50 /home/atlas/RunAtlas/HITS.43401171._001223.pool.root.1
2025-02-25 23:52:06 (22324): Guest Log: Successfully finished the ATLAS job!
2025-02-25 23:52:06 (22324): Guest Log: Copying the results back to the shared directory!
2025-02-25 23:52:06 (22324): Guest Log:  *** Contents of shared directory: ***
2025-02-25 23:52:06 (22324): Guest Log: total 426228
2025-02-25 23:52:06 (22324): Guest Log: -rwxrwxrwx. 1 root root 253480748 Feb 26 04:18 ATLAS.root_0
2025-02-25 23:52:06 (22324): Guest Log: -rwxrwxrwx. 1 root root 181681086 Feb 26  2025 HITS.pool.root.1
2025-02-25 23:52:06 (22324): Guest Log: -rwxrwxrwx. 1 root root      8884 Feb 26 04:18 init_data.xml
2025-02-25 23:52:06 (22324): Guest Log: -rwxrwxrwx. 1 root root    503552 Feb 25 17:04 input.tar.gz
2025-02-25 23:52:06 (22324): Guest Log: -rwxrwxrwx. 1 root root    757760 Feb 26  2025 result.tar.gz
2025-02-25 23:52:06 (22324): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb 25 17:04 start_atlas.sh
2025-02-25 23:52:06 (22324): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-25 23:52:06 (22324): VM Completion File Detected.
2025-02-25 23:52:06 (22324): Powering off VM.
2025-02-25 23:52:07 (22324): Successfully stopped VM.
2025-02-25 23:52:07 (22324): Deregistering VM. (boinc_667bec139715616d, slot#1)
2025-02-25 23:52:07 (22324): Removing network bandwidth throttle group from VM.
2025-02-25 23:52:08 (22324): Removing VM from VirtualBox.
23:52:13 (22324): called boinc_finish(0)

</stderr_txt>
]]>

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