Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-25 11:35:45 (10592): Detected: vboxwrapper 26206
2025-02-25 11:35:45 (10592): Detected: BOINC client v8.0.4
2025-02-25 11:35:45 (10592): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-02-25 11:35:46 (10592): Successfully copied 'init_data.xml' to the shared directory.
2025-02-25 11:35:46 (10592): Create VM. (boinc_3e85bcb21104ab07, slot#2)
2025-02-25 11:35:47 (10592): Setting Memory Size for VM. (4400MB)
2025-02-25 11:35:47 (10592): Setting CPU Count for VM. (4)
2025-02-25 11:35:47 (10592): Setting Chipset Options for VM.
2025-02-25 11:35:47 (10592): Setting Graphics Controller Options for VM.
2025-02-25 11:35:48 (10592): Setting Boot Options for VM.
2025-02-25 11:35:48 (10592): Setting Network Configuration for NAT.
2025-02-25 11:35:48 (10592): Enabling VM Network Access.
2025-02-25 11:35:48 (10592): Disabling USB Support for VM.
2025-02-25 11:35:49 (10592): Disabling COM Port Support for VM.
2025-02-25 11:35:49 (10592): Disabling LPT Port Support for VM.
2025-02-25 11:35:49 (10592): Disabling Audio Support for VM.
2025-02-25 11:35:49 (10592): Disabling Clipboard Support for VM.
2025-02-25 11:35:50 (10592): Disabling Drag and Drop Support for VM.
2025-02-25 11:35:50 (10592): Adding storage controller(s) to VM.
2025-02-25 11:35:50 (10592): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-25 11:35:51 (10592): Adding VirtualBox Guest Additions to VM.
2025-02-25 11:35:51 (10592): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-25 11:35:51 (10592): forwarding host port 53694 to guest port 80
2025-02-25 11:35:51 (10592): Enabling remote desktop for VM.
2025-02-25 11:35:52 (10592): Required extension pack not installed, remote desktop not enabled.
2025-02-25 11:35:52 (10592): Enabling shared directory for VM.
2025-02-25 11:35:52 (10592): Starting VM using VBoxManage interface. (boinc_3e85bcb21104ab07, slot#2)
2025-02-25 11:35:57 (10592): Successfully started VM. (PID = '9008')
2025-02-25 11:35:57 (10592): Reporting VM Process ID to BOINC.
2025-02-25 11:35:57 (10592): Guest Log: BIOS: VirtualBox 7.0.6
2025-02-25 11:35:57 (10592): Guest Log: CPUID EDX: 0x178bfbff
2025-02-25 11:35:57 (10592): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-25 11:35:57 (10592): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-25 11:35:57 (10592): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-25 11:35:57 (10592): Detected: Web Application Enabled (http://localhost:53694)
2025-02-25 11:35:57 (10592): Preference change detected
2025-02-25 11:35:57 (10592): Setting CPU throttle for VM. (60%)
2025-02-25 11:35:57 (10592): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-25 11:35:59 (10592): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-25 11:35:59 (10592): Guest Log: BIOS: Booting from Hard Disk...
2025-02-25 11:36:02 (10592): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-25 11:36:02 (10592): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-25 11:36:02 (10592): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-25 11:36:02 (10592): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-25 11:36:02 (10592): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-25 11:36:02 (10592): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-25 11:36:02 (10592): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-25 11:36:02 (10592): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-25 11:36:02 (10592): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-25 11:36:02 (10592): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-25 11:36:02 (10592): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-25 11:36:02 (10592): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-25 11:36:02 (10592): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-25 11:36:02 (10592): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-25 11:36:02 (10592): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-25 11:36:02 (10592): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-25 11:36:02 (10592): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-25 11:36:02 (10592): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-25 11:36:02 (10592): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-25 11:36:02 (10592): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-25 11:36:02 (10592): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-25 11:36:02 (10592): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-25 11:36:02 (10592): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-25 11:36:02 (10592): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-25 11:36:02 (10592): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-25 11:36:02 (10592): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-25 11:36:02 (10592): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-25 11:36:02 (10592): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-25 11:36:02 (10592): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-25 11:36:02 (10592): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-25 11:36:02 (10592): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-25 11:36:02 (10592): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-25 11:36:11 (10592): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-25 11:36:11 (10592): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-25 11:36:22 (10592): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-25 11:36:22 (10592): Guest Log: 00:00:00.000216 main     Log opened 2025-02-25T11:36:21.090083000Z
2025-02-25 11:36:22 (10592): Guest Log: 00:00:00.000309 main     OS Product: Linux
2025-02-25 11:36:22 (10592): Guest Log: 00:00:00.000341 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-25 11:36:22 (10592): Guest Log: 00:00:00.000367 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-25 11:36:22 (10592): Guest Log: 00:00:00.000392 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-25 11:36:22 (10592): Guest Log: 00:00:00.000393 main     Process ID: 1298
2025-02-25 11:36:22 (10592): Guest Log: 00:00:00.000393 main     Package type: LINUX_64BITS_GENERIC
2025-02-25 11:36:22 (10592): Guest Log: 00:00:00.002912 main     5.2.32 r132073 started. Verbose level = 0
2025-02-25 11:36:22 (10592): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-25 11:36:22 (10592): Guest Log: [INFO] Mounting shared directory
2025-02-25 11:36:22 (10592): Guest Log: [INFO] Checking for init_data.xml
2025-02-25 11:36:27 (10592): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-25 11:36:27 (10592): Guest Log: [INFO] Detected branch: prod
2025-02-25 11:36:27 (10592): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-25 11:36:27 (10592): Guest Log: Copying input files
2025-02-25 11:36:29 (10592): Guest Log: Copied input files into RunAtlas.
2025-02-25 11:36:29 (10592): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-25 11:36:29 (10592): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-25 11:36:29 (10592): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-25 11:36:29 (10592): Guest Log: Further information can be found at the LHC@home message board.
2025-02-25 11:36:32 (10592): Guest Log: 00:00:10.019749 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 011 210 765 000ns (GuestNow=1 740 501 392 304 669 000 ns GuestLast=1 740 483 381 093 904 000 ns fSetTimeLastLoop=true )
2025-02-25 11:36:39 (10592): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-25 11:36:39 (10592): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-25 11:36:39 (10592): Guest Log: 2.6.3.0 1574 0 32168 143045 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-02-25 11:36:41 (10592): Guest Log: copied the webapp to /var/www
2025-02-25 11:36:41 (10592): Guest Log: ATHENA_PROC_NUMBER=4
2025-02-25 11:36:41 (10592): Guest Log: ATHENA_CORE_NUMBER=4
2025-02-25 11:36:41 (10592): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-25 11:36:41 (10592): Guest Log:  *** Starting ATLAS job. (PandaID=6530518365 taskID=43401171) ***
2025-02-25 13:16:01 (10592): Status Report: Elapsed Time: '6000.000000'
2025-02-25 13:16:01 (10592): Status Report: CPU Time: '9819.296875'
2025-02-25 14:56:05 (10592): Status Report: Elapsed Time: '12000.000000'
2025-02-25 14:56:05 (10592): Status Report: CPU Time: '21031.968750'
2025-02-25 16:36:09 (10592): Status Report: Elapsed Time: '18000.000000'
2025-02-25 16:36:09 (10592): Status Report: CPU Time: '32550.406250'
2025-02-25 16:46:02 (10592): Guest Log:  *** Job finished ***
2025-02-25 16:46:02 (10592): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-25 16:46:02 (10592): Guest Log: 2025-02-25 21:45:51,638 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
2025-02-25 16:46:02 (10592): Guest Log: 2025-02-25 21:45:52,652 | INFO     | [job] queue monitor thread has finished
2025-02-25 16:46:02 (10592): Guest Log: 2025-02-25 21:45:52,811 | INFO     | [data] queue_monitor thread has finished
2025-02-25 16:46:02 (10592): Guest Log: 2025-02-25 21:45:52,843 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140151247927104)>', '<ExcThread(monitor, started 140150084466432)>']
2025-02-25 16:46:02 (10592): Guest Log: 2025-02-25 21:45:53,115 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-25 16:46:02 (10592): Guest Log: 2025-02-25 21:45:53,115 | INFO     | [monitor] control thread has ended
2025-02-25 16:46:02 (10592): Guest Log: 2025-02-25 21:45:57,853 | INFO     | all workflow threads have been joined
2025-02-25 16:46:02 (10592): Guest Log: 2025-02-25 21:45:57,853 | INFO     | end of generic workflow (traces error code: 0)
2025-02-25 16:46:02 (10592): Guest Log: 2025-02-25 21:45:57,853 | INFO     | traces error code: 0
2025-02-25 16:46:02 (10592): Guest Log: 2025-02-25 21:45:57,853 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-25 16:46:02 (10592): Guest Log: 2025-02-25 21:45:58,012 [wrapper] ==== pilot stdout END ====
2025-02-25 16:46:02 (10592): Guest Log: 2025-02-25 21:45:58,029 [wrapper] ==== wrapper stdout RESUME ====
2025-02-25 16:46:02 (10592): Guest Log: 2025-02-25 21:45:58,052 [wrapper] pilotpid: 5903
2025-02-25 16:46:02 (10592): Guest Log: 2025-02-25 21:45:58,057 [wrapper] Pilot exit status: 0
2025-02-25 16:46:02 (10592): Guest Log: 2025-02-25 21:45:58,169 [wrapper] pandaids: 6530518365
2025-02-25 16:46:02 (10592): Guest Log: 2025-02-25 21:45:58,244 [wrapper] cleanup supervisor_pilot 18226 5904
2025-02-25 16:46:02 (10592): Guest Log: 2025-02-25 21:45:58,288 [wrapper] Test setup, not cleaning
2025-02-25 16:46:02 (10592): Guest Log: 2025-02-25 21:45:58,322 [wrapper] apfmon messages muted
2025-02-25 16:46:02 (10592): Guest Log: 2025-02-25 21:45:58,385 [wrapper] ==== wrapper stdout END ====
2025-02-25 16:46:02 (10592): Guest Log: 2025-02-25 21:45:58,397 [wrapper] ==== wrapper stderr END ====
2025-02-25 16:46:02 (10592): Guest Log:  *** Error codes and diagnostics ***
2025-02-25 16:46:02 (10592): Guest Log:     "exeErrorCode": 0,
2025-02-25 16:46:02 (10592): Guest Log:     "exeErrorDiag": "",
2025-02-25 16:46:02 (10592): Guest Log:     "pilotErrorCode": 0,
2025-02-25 16:46:02 (10592): Guest Log:     "pilotErrorDiag": "",
2025-02-25 16:46:02 (10592): Guest Log:  *** Listing of results directory ***
2025-02-25 16:46:02 (10592): Guest Log: total 187760
2025-02-25 16:46:02 (10592): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 25 15:18 pilot3.tar.gz
2025-02-25 16:46:02 (10592): Guest Log: -rwx------. 1 atlas atlas     35865 Feb 25 15:33 runpilot2-wrapper.sh
2025-02-25 16:46:02 (10592): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 25 15:33 queuedata.json
2025-02-25 16:46:02 (10592): Guest Log: -rwxr-xr-x. 1 atlas atlas     11034 Feb 25 16:36 init_data.xml
2025-02-25 16:46:02 (10592): Guest Log: -rwxr-xr-x. 1 atlas atlas    503553 Feb 25 16:36 input.tar.gz
2025-02-25 16:46:02 (10592): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb 25 16:36 start_atlas.sh
2025-02-25 16:46:02 (10592): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 25 16:36 EVNT.43401169._000045.pool.root.1 -> /data/./ATLAS.root_0
2025-02-25 16:46:02 (10592): Guest Log: -rw-r--r--. 1 atlas atlas      2542 Feb 25 16:36 pandaJob.out
2025-02-25 16:46:02 (10592): Guest Log: -rw-------. 1 atlas atlas       424 Feb 25 16:36 setup.sh.local
2025-02-25 16:46:02 (10592): Guest Log: -rw-------. 1 atlas atlas    988282 Feb 25 16:37 agis_schedconf.cvmfs.json
2025-02-25 16:46:02 (10592): Guest Log: drwx------. 4 atlas atlas      4096 Feb 25 16:37 pilot3
2025-02-25 16:46:02 (10592): Guest Log: -rw-------. 1 atlas atlas 185519136 Feb 25 21:44 HITS.43401171._001129.pool.root.1
2025-02-25 16:46:02 (10592): Guest Log: -rw-------. 1 atlas atlas      1029 Feb 25 21:45 memory_monitor_summary.json
2025-02-25 16:46:02 (10592): Guest Log: -rw-------. 1 atlas atlas        95 Feb 25 21:45 pilot_heartbeat.json
2025-02-25 16:46:02 (10592): Guest Log: -rw-------. 1 atlas atlas   1573632 Feb 25 21:45 agis_ddmendpoints.agis.ALL.json
2025-02-25 16:46:02 (10592): Guest Log: -rw-------. 1 atlas atlas    315723 Feb 25 21:45 log.43401171._001129.job.log.tgz.1
2025-02-25 16:46:02 (10592): Guest Log: -rw-------. 1 atlas atlas      7728 Feb 25 21:45 heartbeat.json
2025-02-25 16:46:02 (10592): Guest Log: -rw-------. 1 atlas atlas      4275 Feb 25 21:45 pilotlog.txt
2025-02-25 16:46:02 (10592): Guest Log: -rw-------. 1 atlas atlas   1189033 Feb 25 21:45 log.43401171._001129.job.log.1
2025-02-25 16:46:02 (10592): Guest Log: -rw-------. 1 atlas atlas       357 Feb 25 21:45 output.list
2025-02-25 16:46:02 (10592): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 25 21:45 runtime_log
2025-02-25 16:46:02 (10592): Guest Log: -rw-------. 1 atlas atlas   1525760 Feb 25 21:45 result.tar.gz
2025-02-25 16:46:02 (10592): Guest Log: -rw-------. 1 atlas atlas       647 Feb 25 21:45 wMDLDmG7B76nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmDtwKDmPwC4rm.diag
2025-02-25 16:46:02 (10592): Guest Log: -rw-r--r--. 1 atlas atlas     10906 Feb 25 21:45 runtime_log.err
2025-02-25 16:46:02 (10592): Guest Log: Looking for outputfile HITS.43401171._001129.pool.root.1
2025-02-25 16:46:02 (10592): Guest Log: HITS file was successfully produced
2025-02-25 16:46:02 (10592): Guest Log: -rw-------. 1 atlas atlas 185519136 Feb 25 21:44 /home/atlas/RunAtlas/HITS.43401171._001129.pool.root.1
2025-02-25 16:46:04 (10592): Guest Log: Successfully finished the ATLAS job!
2025-02-25 16:46:04 (10592): Guest Log: Copying the results back to the shared directory!
2025-02-25 16:46:04 (10592): Guest Log:  *** Contents of shared directory: ***
2025-02-25 16:46:04 (10592): Guest Log: total 427564
2025-02-25 16:46:04 (10592): Guest Log: -rwxrwxrwx. 1 root root 250239335 Feb 25 16:35 ATLAS.root_0
2025-02-25 16:46:04 (10592): Guest Log: -rwxrwxrwx. 1 root root 185519136 Feb 25 21:46 HITS.pool.root.1
2025-02-25 16:46:04 (10592): Guest Log: -rwxrwxrwx. 1 root root     11034 Feb 25 16:35 init_data.xml
2025-02-25 16:46:04 (10592): Guest Log: -rwxrwxrwx. 1 root root    503553 Feb 25 16:35 input.tar.gz
2025-02-25 16:46:04 (10592): Guest Log: -rwxrwxrwx. 1 root root   1525760 Feb 25 21:46 result.tar.gz
2025-02-25 16:46:04 (10592): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb 25 16:35 start_atlas.sh
2025-02-25 16:46:04 (10592): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-25 16:46:04 (10592): VM Completion File Detected.
2025-02-25 16:46:04 (10592): Powering off VM.
2025-02-25 16:46:05 (10592): Successfully stopped VM.
2025-02-25 16:46:05 (10592): Deregistering VM. (boinc_3e85bcb21104ab07, slot#2)
2025-02-25 16:46:05 (10592): Removing network bandwidth throttle group from VM.
2025-02-25 16:46:05 (10592): Removing VM from VirtualBox.
16:46:10 (10592): called boinc_finish(0)

</stderr_txt>
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