Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:32:41 (24806): wrapper (7.7.26015): starting
11:32:41 (24806): wrapper: running run_atlas (--nthreads 12)
[2025-02-25 11:32:41] Arguments: --nthreads 12
[2025-02-25 11:32:41] Threads: 12
[2025-02-25 11:32:41] Checking for CVMFS
[2025-02-25 11:32:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 11:32:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 11:32:42] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 11:32:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 11:32:42] 2.11.2.0 12163 292878 154004 143045 2 55 18165796 20275201 1 130560 0 24484621 99.986 7995537 42522 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-25 11:32:42] CVMFS is ok
[2025-02-25 11:32:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 11:32:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 11:32:42] Further information can be found at the LHC@home message board.
[2025-02-25 11:32:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 11:32:42] Checking for apptainer binary...
[2025-02-25 11:32:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 11:32:42] Running /usr/bin/apptainer --version
[2025-02-25 11:32:42] apptainer version 1.3.2-1.el7
[2025-02-25 11:32:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 11:32:43] c-205-20.aglt2.org
[2025-02-25 11:32:43] apptainer works
[2025-02-25 11:32:43] Set ATHENA_PROC_NUMBER=12
[2025-02-25 11:32:43] Set ATHENA_CORE_NUMBER=12
[2025-02-25 11:32:43] Starting ATLAS job with PandaID=6530425168
[2025-02-25 11:32:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 12:58:40]  *** The last 200 lines of the pilot log: ***
[2025-02-25 12:58:40]  is_altstaged=None
[2025-02-25 12:58:40]  is_tar=False
[2025-02-25 12:58:40]  lfn=log.43401137._001540.job.log.tgz.1
[2025-02-25 12:58:40]  mtime=0
[2025-02-25 12:58:40]  protocol_id=None
[2025-02-25 12:58:40]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-25 12:58:40]  replicas=None
[2025-02-25 12:58:40]  scope=mc23_13p6TeV
[2025-02-25 12:58:40]  status=None
[2025-02-25 12:58:40]  status_code=0
[2025-02-25 12:58:40]  storage_token=
[2025-02-25 12:58:40]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6530425168/log.43401137._001540.job.log.tgz.1
[2025-02-25 12:58:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a3/ce/log.43401137._001540.job.log.tgz.1
[2025-02-25 12:58:40]  workdir=None
[2025-02-25 12:58:40] ]
[2025-02-25 12:58:40] 2025-02-25 17:58:12,981 | INFO     | transferring file log.43401137._001540.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6530425168/log.43401137._001540.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-02-25 12:58:40] 2025-02-25 17:58:12,981 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6530425168/log.43401137._001540.job.log.tgz.1 /tmp/boinchome/slots/0/log.43401137._001540.job
[2025-02-25 12:58:40] 2025-02-25 17:58:13,001 | INFO     | adding to output.list: log.43401137._001540.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a3/ce/log.43401137._001540.job.log.tg
[2025-02-25 12:58:40] 2025-02-25 17:58:13,002 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-25 12:58:40] 2025-02-25 17:58:13,002 | INFO     | summary of transferred files:
[2025-02-25 12:58:40] 2025-02-25 17:58:13,002 | INFO     |  -- lfn=log.43401137._001540.job.log.tgz.1, status_code=0, status=transferred
[2025-02-25 12:58:40] 2025-02-25 17:58:13,003 | INFO     | stage-out finished correctly
[2025-02-25 12:58:40] 2025-02-25 17:58:14,728 | INFO     | monitor loop #376: job 0:6530425168 is in state 'finished'
[2025-02-25 12:58:40] 2025-02-25 17:58:14,728 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 12:58:40] 2025-02-25 17:58:15,946 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-25 12:58:40] 2025-02-25 17:58:16,029 | INFO     | job 6530425168 has state=finished
[2025-02-25 12:58:40] 2025-02-25 17:58:16,030 | INFO     | preparing for final server update for job 6530425168 in state='finished'
[2025-02-25 12:58:40] 2025-02-25 17:58:16,030 | INFO     | this job has now completed (state=finished)
[2025-02-25 12:58:40] 2025-02-25 17:58:16,030 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-25 12:58:40] 2025-02-25 17:58:16,031 | INFO     | log transfer has been attempted: DONE
[2025-02-25 12:58:40] 2025-02-25 17:58:16,031 | INFO     | job 6530425168 has finished - writing final server update
[2025-02-25 12:58:40] 2025-02-25 17:58:16,031 | INFO     | total number of processed events: 400 (read)
[2025-02-25 12:58:40] 2025-02-25 17:58:16,033 | INFO     | executing command: lscpu
[2025-02-25 12:58:40] 2025-02-25 17:58:16,058 | INFO     | found 12 cores (6 cores per socket, 2 sockets)
[2025-02-25 12:58:40] 2025-02-25 17:58:16,071 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-25 12:58:40] 2025-02-25 17:58:17,232 | INFO     | monitor loop #377: job 0:6530425168 is in state 'finished'
[2025-02-25 12:58:40] 2025-02-25 17:58:17,232 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 12:58:40] 2025-02-25 17:58:19,604 | INFO     | PID=28417 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-02-25 12:58:40] 2025-02-25 17:58:19,735 | INFO     | monitor loop #378: job 0:6530425168 is in state 'finished'
[2025-02-25 12:58:40] 2025-02-25 17:58:19,735 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 12:58:40] 2025-02-25 17:58:20,546 | INFO     | CPU arch script returned: x86-64-v2
[2025-02-25 12:58:40] 2025-02-25 17:58:20,546 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6530425168/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 12:58:40] 2025-02-25 17:58:20,547 | INFO     | extracted standard info from prmon json
[2025-02-25 12:58:40] 2025-02-25 17:58:20,547 | INFO     | extracted standard memory fields from prmon json
[2025-02-25 12:58:40] 2025-02-25 17:58:20,547 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-25 12:58:40] 2025-02-25 17:58:20,547 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 12:58:40] 2025-02-25 17:58:20,547 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 12:58:40] 2025-02-25 17:58:20,549 | INFO     | fitting pss+swap vs Time
[2025-02-25 12:58:40] 2025-02-25 17:58:20,549 | INFO     | model: linear, x: [1740501510.0, 1740501571.0, 1740501632.0, 1740501693.0, 1740501754.0, 1740501815.0, 1740501876.0, 1740501937.0, 1740501998.0, 1740502059.0, 1740
[2025-02-25 12:58:40] 2025-02-25 17:58:20,549 | INFO     | sum of square deviations: 141539398.0
[2025-02-25 12:58:40] 2025-02-25 17:58:20,550 | INFO     | sum of deviations: 19460252452.0
[2025-02-25 12:58:40] 2025-02-25 17:58:20,550 | INFO     | mean x: 1740503828.0
[2025-02-25 12:58:40] 2025-02-25 17:58:20,550 | INFO     | mean y: 2640096.5454545454
[2025-02-25 12:58:40] 2025-02-25 17:58:20,550 | INFO     | -- intersect: -239299238851.33862
[2025-02-25 12:58:40] 2025-02-25 17:58:20,550 | INFO     | intersect: -239299238851.33862
[2025-02-25 12:58:40] 2025-02-25 17:58:20,550 | INFO     | chi2: 2.40781521310256
[2025-02-25 12:58:40] 2025-02-25 17:58:20,551 | INFO     | -- intersect: -239299238851.33862
[2025-02-25 12:58:40] 2025-02-25 17:58:20,551 | INFO     | current memory leak: 137.49 B/s (using 77 data points, chi2=2.41)
[2025-02-25 12:58:40] 2025-02-25 17:58:20,551 | INFO     | ..............................
[2025-02-25 12:58:40] 2025-02-25 17:58:20,551 | INFO     | . Timing measurements:
[2025-02-25 12:58:40] 2025-02-25 17:58:20,551 | INFO     | . get job = 0 s
[2025-02-25 12:58:40] 2025-02-25 17:58:20,551 | INFO     | . initial setup = 2 s
[2025-02-25 12:58:40] 2025-02-25 17:58:20,552 | INFO     | . payload setup = 7 s
[2025-02-25 12:58:40] 2025-02-25 17:58:20,552 | INFO     | . stage-in = 0 s
[2025-02-25 12:58:40] 2025-02-25 17:58:20,552 | INFO     | . payload execution = 5088 s
[2025-02-25 12:58:40] 2025-02-25 17:58:20,552 | INFO     | . stage-out = 0 s
[2025-02-25 12:58:40] 2025-02-25 17:58:20,552 | INFO     | . log creation = 0 s
[2025-02-25 12:58:40] 2025-02-25 17:58:20,552 | INFO     | ..............................
[2025-02-25 12:58:40] 2025-02-25 17:58:20,637 | INFO     | 
[2025-02-25 12:58:40] 2025-02-25 17:58:20,637 | INFO     | job summary report
[2025-02-25 12:58:40] 2025-02-25 17:58:20,637 | INFO     | --------------------------------------------------
[2025-02-25 12:58:40] 2025-02-25 17:58:20,638 | INFO     | PanDA job id: 6530425168
[2025-02-25 12:58:40] 2025-02-25 17:58:20,638 | INFO     | task id: 43401137
[2025-02-25 12:58:40] 2025-02-25 17:58:20,638 | INFO     | errors: (none)
[2025-02-25 12:58:40] 2025-02-25 17:58:20,638 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 12:58:40] 2025-02-25 17:58:20,638 | INFO     | pilot state: finished 
[2025-02-25 12:58:40] 2025-02-25 17:58:20,638 | INFO     | transexitcode: 0
[2025-02-25 12:58:40] 2025-02-25 17:58:20,638 | INFO     | exeerrorcode: 0
[2025-02-25 12:58:40] 2025-02-25 17:58:20,638 | INFO     | exeerrordiag: 
[2025-02-25 12:58:40] 2025-02-25 17:58:20,638 | INFO     | exitcode: 0
[2025-02-25 12:58:40] 2025-02-25 17:58:20,639 | INFO     | exitmsg: OK
[2025-02-25 12:58:40] 2025-02-25 17:58:20,639 | INFO     | cpuconsumptiontime: 47130 s
[2025-02-25 12:58:40] 2025-02-25 17:58:20,639 | INFO     | nevents: 400
[2025-02-25 12:58:40] 2025-02-25 17:58:20,639 | INFO     | neventsw: 0
[2025-02-25 12:58:40] 2025-02-25 17:58:20,639 | INFO     | pid: 2561
[2025-02-25 12:58:40] 2025-02-25 17:58:20,639 | INFO     | pgrp: 2561
[2025-02-25 12:58:40] 2025-02-25 17:58:20,639 | INFO     | corecount: 12
[2025-02-25 12:58:40] 2025-02-25 17:58:20,639 | INFO     | event service: False
[2025-02-25 12:58:40] 2025-02-25 17:58:20,639 | INFO     | sizes: {0: 2376960, 5: 2377166, 11: 2377222, 5099: 2403368, 5100: 2412309, 5103: 2412365, 5108: 2412663}
[2025-02-25 12:58:40] 2025-02-25 17:58:20,639 | INFO     | --------------------------------------------------
[2025-02-25 12:58:40] 2025-02-25 17:58:20,640 | INFO     | 
[2025-02-25 12:58:40] 2025-02-25 17:58:20,640 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-25 12:58:40] 2025-02-25 17:58:20,663 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 12:58:40] 2025-02-25 17:58:20,664 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 12:58:40] 2025-02-25 17:58:20,664 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 12:58:40] 2025-02-25 17:58:20,664 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 12:58:40] 2025-02-25 17:58:20,664 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 12:58:40] 2025-02-25 17:58:20,664 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 12:58:40] 2025-02-25 17:58:20,664 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 12:58:40] 2025-02-25 17:58:20,665 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 12:58:40] 2025-02-25 17:58:20,665 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 12:58:40] 2025-02-25 17:58:20,665 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 12:58:40] 2025-02-25 17:58:20,665 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 12:58:40] 2025-02-25 17:58:20,665 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 12:58:40] 2025-02-25 17:58:20,665 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 12:58:40] 2025-02-25 17:58:20,666 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 12:58:40] 2025-02-25 17:58:20,666 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 12:58:40] 2025-02-25 17:58:20,666 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 12:58:40] 2025-02-25 17:58:20,666 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 12:58:40] 2025-02-25 17:58:20,666 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 12:58:40] 2025-02-25 17:58:20,666 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 12:58:40] 2025-02-25 17:58:20,667 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 12:58:40] 2025-02-25 17:58:20,667 | INFO     | job 6530425168 has completed (purged errors)
[2025-02-25 12:58:40] 2025-02-25 17:58:20,667 | INFO     | overall cleanup function is called
[2025-02-25 12:58:40] 2025-02-25 17:58:21,675 | INFO     | --- collectZombieJob: --- 10, [2561]
[2025-02-25 12:58:40] 2025-02-25 17:58:21,675 | INFO     | zombie collector waiting for pid 2561
[2025-02-25 12:58:40] 2025-02-25 17:58:21,675 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 12:58:40] 2025-02-25 17:58:21,675 | INFO     | collected zombie processes
[2025-02-25 12:58:40] 2025-02-25 17:58:21,675 | INFO     | will attempt to kill all subprocesses of pid=2561
[2025-02-25 12:58:40] 2025-02-25 17:58:21,740 | INFO     | process IDs to be killed: [2561] (in reverse order)
[2025-02-25 12:58:40] 2025-02-25 17:58:21,790 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 12:58:40] 2025-02-25 17:58:21,791 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 12:58:40] 2025-02-25 17:58:21,794 | INFO     | did not find any defunct processes belonging to 2561
[2025-02-25 12:58:40] 2025-02-25 17:58:21,797 | INFO     | did not find any defunct processes belonging to 2561
[2025-02-25 12:58:40] 2025-02-25 17:58:21,797 | INFO     | ready for new job
[2025-02-25 12:58:40] 2025-02-25 17:58:21,798 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 12:58:40] 2025-02-25 17:58:21,799 | INFO     | **************************************
[2025-02-25 12:58:40] 2025-02-25 17:58:21,799 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 12:58:40] 2025-02-25 17:58:21,799 | INFO     | **************************************
[2025-02-25 12:58:40] 2025-02-25 17:58:21,799 | INFO     | 
[2025-02-25 12:58:40] 2025-02-25 17:58:21,800 | INFO     | architecture information:
[2025-02-25 12:58:40] 2025-02-25 17:58:21,800 | INFO     | executing command: cat /etc/os-release
[2025-02-25 12:58:40] 2025-02-25 17:58:21,815 | INFO     | cat /etc/os-release:
[2025-02-25 12:58:40] NAME="CentOS Linux"
[2025-02-25 12:58:40] VERSION="7 (Core)"
[2025-02-25 12:58:40] ID="centos"
[2025-02-25 12:58:40] ID_LIKE="rhel fedora"
[2025-02-25 12:58:40] VERSION_ID="7"
[2025-02-25 12:58:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 12:58:40] ANSI_COLOR="0;31"
[2025-02-25 12:58:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 12:58:40] HOME_URL="https://www.centos.org/"
[2025-02-25 12:58:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 12:58:40] 
[2025-02-25 12:58:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 12:58:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 12:58:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 12:58:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 12:58:40] 
[2025-02-25 12:58:40] 2025-02-25 17:58:21,815 | INFO     | **************************************
[2025-02-25 12:58:40] 2025-02-25 17:58:22,316 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-25 12:58:40] 2025-02-25 17:58:22,334 | INFO     | sufficient remaining disk space (29348593664 B)
[2025-02-25 12:58:40] 2025-02-25 17:58:22,334 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 12:58:40] 2025-02-25 17:58:22,334 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 12:58:40] 2025-02-25 17:58:22,335 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-25 12:58:40] 2025-02-25 17:58:22,335 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 12:58:40] 2025-02-25 17:58:22,335 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 12:58:40] 2025-02-25 17:58:22,335 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 12:58:40] 2025-02-25 17:58:22,336 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 12:58:40] 2025-02-25 17:58:22,336 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 12:58:40] 2025-02-25 17:58:22,461 | INFO     | all payload control threads have been joined
[2025-02-25 12:58:40] 2025-02-25 17:58:22,860 | INFO     | all job control threads have been joined
[2025-02-25 12:58:40] 2025-02-25 17:58:22,926 | INFO     | all data control threads have been joined
[2025-02-25 12:58:40] 2025-02-25 17:58:23,248 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 12:58:40] 2025-02-25 17:58:23,249 | INFO     | aborting loop
[2025-02-25 12:58:40] 2025-02-25 17:58:23,338 | INFO     | [job] queue monitor thread has finished
[2025-02-25 12:58:40] 2025-02-25 17:58:23,338 | INFO     | [job] retrieve thread has finished
[2025-02-25 12:58:40] 2025-02-25 17:58:23,466 | INFO     | [payload] control thread has finished
[2025-02-25 12:58:40] 2025-02-25 17:58:23,560 | INFO     | [payload] failed_post thread has finished
[2025-02-25 12:58:40] 2025-02-25 17:58:23,605 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 12:58:40] 2025-02-25 17:58:23,774 | INFO     | [data] copytool_in thread has finished
[2025-02-25 12:58:40] 2025-02-25 17:58:23,866 | INFO     | [job] control thread has finished
[2025-02-25 12:58:40] 2025-02-25 17:58:23,932 | INFO     | [data] control thread has finished
[2025-02-25 12:58:40] 2025-02-25 17:58:24,061 | INFO     | [job] validate thread has finished
[2025-02-25 12:58:40] 2025-02-25 17:58:24,254 | INFO     | [job] job monitor thread has finished
[2025-02-25 12:58:40] 2025-02-25 17:58:24,269 | INFO     | [payload] validate_post thread has finished
[2025-02-25 12:58:40] 2025-02-25 17:58:24,332 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 12:58:40] 2025-02-25 17:58:24,589 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 12:58:40] 2025-02-25 17:58:24,693 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 12:58:40] 2025-02-25 17:58:25,610 | INFO     | [data] copytool_out thread has finished
[2025-02-25 12:58:40] 2025-02-25 17:58:26,342 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 12:58:40] 2025-02-25 17:58:32,610 | INFO     | job.realtimelogging is not enabled
[2025-02-25 12:58:40] 2025-02-25 17:58:33,615 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 12:58:40] 2025-02-25 17:58:35,020 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140614616700736)>', '<ExcThread(monitor, started 140614167406336)>']
[2025-02-25 12:58:40] 2025-02-25 17:58:35,401 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 12:58:40] 2025-02-25 17:58:35,401 | INFO     | [monitor] control thread has ended
[2025-02-25 12:58:40] 2025-02-25 17:58:40,021 | INFO     | all workflow threads have been joined
[2025-02-25 12:58:40] 2025-02-25 17:58:40,021 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 12:58:40] 2025-02-25 17:58:40,022 | INFO     | traces error code: 0
[2025-02-25 12:58:40] 2025-02-25 17:58:40,022 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 12:58:40] 2025-02-25 17:58:40,112 [wrapper] ==== pilot stdout END ====
[2025-02-25 12:58:40] 2025-02-25 17:58:40,116 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 12:58:40] 2025-02-25 17:58:40,120 [wrapper] pilotpid: 28417
[2025-02-25 12:58:40] 2025-02-25 17:58:40,123 [wrapper] Pilot exit status: 0
[2025-02-25 12:58:40] 2025-02-25 17:58:40,137 [wrapper] pandaids: 6530425168
[2025-02-25 12:58:40] 2025-02-25 17:58:40,179 [wrapper] cleanup supervisor_pilot 27509 28418
[2025-02-25 12:58:40] 2025-02-25 17:58:40,183 [wrapper] Test setup, not cleaning
[2025-02-25 12:58:40] 2025-02-25 17:58:40,191 [wrapper] apfmon messages muted
[2025-02-25 12:58:40] 2025-02-25 17:58:40,194 [wrapper] ==== wrapper stdout END ====
[2025-02-25 12:58:40] 2025-02-25 17:58:40,198 [wrapper] ==== wrapper stderr END ====
[2025-02-25 12:58:40]  *** Error codes and diagnostics ***
[2025-02-25 12:58:40]     "exeErrorCode": 0,
[2025-02-25 12:58:40]     "exeErrorDiag": "",
[2025-02-25 12:58:40]     "pilotErrorCode": 0,
[2025-02-25 12:58:40]     "pilotErrorDiag": "",
[2025-02-25 12:58:40]  *** Listing of results directory ***
[2025-02-25 12:58:40] total 437828
[2025-02-25 12:58:40] -rw-r--r-- 1 boincer umatlas    491065 Feb 25 09:02 pilot3.tar.gz
[2025-02-25 12:58:40] -rw-r--r-- 1 boincer umatlas      5118 Feb 25 09:20 queuedata.json
[2025-02-25 12:58:40] -rwx------ 1 boincer umatlas     35865 Feb 25 09:20 runpilot2-wrapper.sh
[2025-02-25 12:58:40] -rw-r--r-- 1 boincer umatlas       100 Feb 25 11:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 12:58:40] -rwxr-xr-x 1 boincer umatlas      7986 Feb 25 11:32 run_atlas
[2025-02-25 12:58:40] -rw-r--r-- 1 boincer umatlas       105 Feb 25 11:32 job.xml
[2025-02-25 12:58:40] -rw-r--r-- 2 boincer umatlas 254280743 Feb 25 11:32 EVNT.43401135._000074.pool.root.1
[2025-02-25 12:58:40] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 11:32 start_atlas.sh
[2025-02-25 12:58:40] drwxrwx--x 2 boincer umatlas      4096 Feb 25 11:32 shared
[2025-02-25 12:58:40] -rw-r--r-- 2 boincer umatlas    503556 Feb 25 11:32 input.tar.gz
[2025-02-25 12:58:40] -rw-r--r-- 1 boincer umatlas         0 Feb 25 11:32 boinc_lockfile
[2025-02-25 12:58:40] -rw-r--r-- 1 boincer umatlas      2558 Feb 25 11:32 pandaJob.out
[2025-02-25 12:58:40] -rw------- 1 boincer umatlas       424 Feb 25 11:32 setup.sh.local
[2025-02-25 12:58:40] -rw------- 1 boincer umatlas    988282 Feb 25 11:32 agis_schedconf.cvmfs.json
[2025-02-25 12:58:40] -rw------- 1 boincer umatlas   1577983 Feb 25 11:32 agis_ddmendpoints.agis.ALL.json
[2025-02-25 12:58:40] drwx------ 4 boincer umatlas      4096 Feb 25 11:32 pilot3
[2025-02-25 12:58:40] -rw-r--r-- 1 boincer umatlas      5868 Feb 25 12:56 init_data.xml
[2025-02-25 12:58:40] -rw------- 1 boincer umatlas 188551400 Feb 25 12:57 HITS.43401137._001540.pool.root.1
[2025-02-25 12:58:40] -rw------- 1 boincer umatlas        95 Feb 25 12:57 pilot_heartbeat.json
[2025-02-25 12:58:40] -rw------- 1 boincer umatlas      1057 Feb 25 12:58 memory_monitor_summary.json
[2025-02-25 12:58:40] -rw-r--r-- 1 boincer umatlas       529 Feb 25 12:58 boinc_task_state.xml
[2025-02-25 12:58:40] -rw------- 1 boincer umatlas    368207 Feb 25 12:58 log.43401137._001540.job.log.tgz.1
[2025-02-25 12:58:40] -rw------- 1 boincer umatlas      7775 Feb 25 12:58 heartbeat.json
[2025-02-25 12:58:40] -rw-r--r-- 1 boincer umatlas        27 Feb 25 12:58 wrapper_checkpoint.txt
[2025-02-25 12:58:40] -rw-r--r-- 1 boincer umatlas      8192 Feb 25 12:58 boinc_mmap_file
[2025-02-25 12:58:40] -rw------- 1 boincer umatlas      4410 Feb 25 12:58 pilotlog.txt
[2025-02-25 12:58:40] -rw------- 1 boincer umatlas    478328 Feb 25 12:58 log.43401137._001540.job.log.1
[2025-02-25 12:58:40] -rw------- 1 boincer umatlas       357 Feb 25 12:58 output.list
[2025-02-25 12:58:40] -rw-r--r-- 1 boincer umatlas       620 Feb 25 12:58 runtime_log
[2025-02-25 12:58:40] -rw------- 1 boincer umatlas    870400 Feb 25 12:58 result.tar.gz
[2025-02-25 12:58:40] -rw-r--r-- 1 boincer umatlas     11015 Feb 25 12:58 runtime_log.err
[2025-02-25 12:58:40] -rw------- 1 boincer umatlas       658 Feb 25 12:58 QpPLDmQyA76n9Rq4apOajLDm4fhM0noT9bVoFjIUDm5kfKDmWsB9an.diag
[2025-02-25 12:58:40] -rw-r--r-- 1 boincer umatlas     21621 Feb 25 12:58 stderr.txt
[2025-02-25 12:58:40] HITS file was successfully produced:
[2025-02-25 12:58:40] -rw------- 1 boincer umatlas 188551400 Feb 25 12:57 shared/HITS.pool.root.1
[2025-02-25 12:58:40]  *** Contents of shared directory: ***
[2025-02-25 12:58:40] total 433832
[2025-02-25 12:58:40] -rw-r--r-- 2 boincer umatlas 254280743 Feb 25 11:32 ATLAS.root_0
[2025-02-25 12:58:40] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 11:32 start_atlas.sh
[2025-02-25 12:58:40] -rw-r--r-- 2 boincer umatlas    503556 Feb 25 11:32 input.tar.gz
[2025-02-25 12:58:40] -rw------- 1 boincer umatlas 188551400 Feb 25 12:57 HITS.pool.root.1
[2025-02-25 12:58:40] -rw------- 1 boincer umatlas    870400 Feb 25 12:58 result.tar.gz
12:58:41 (24806): run_atlas exited; CPU time 47049.595628
12:58:41 (24806): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN