Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-26 00:13:45 (20620): Detected: vboxwrapper 26206
2025-02-26 00:13:45 (20620): Detected: BOINC client v8.0.2
2025-02-26 00:13:45 (20620): Detected: VirtualBox VboxManage Interface (Version: 7.0.18)
2025-02-26 00:13:46 (20620): Successfully copied 'init_data.xml' to the shared directory.
2025-02-26 00:13:46 (20620): Create VM. (boinc_83226314407a8b3d, slot#5)
2025-02-26 00:13:47 (20620): Setting Memory Size for VM. (4800MB)
2025-02-26 00:13:47 (20620): Setting CPU Count for VM. (8)
2025-02-26 00:13:47 (20620): Setting Chipset Options for VM.
2025-02-26 00:13:47 (20620): Setting Graphics Controller Options for VM.
2025-02-26 00:13:48 (20620): Setting Boot Options for VM.
2025-02-26 00:13:48 (20620): Setting Network Configuration for NAT.
2025-02-26 00:13:48 (20620): Enabling VM Network Access.
2025-02-26 00:13:48 (20620): Disabling USB Support for VM.
2025-02-26 00:13:49 (20620): Disabling COM Port Support for VM.
2025-02-26 00:13:49 (20620): Disabling LPT Port Support for VM.
2025-02-26 00:13:49 (20620): Disabling Audio Support for VM.
2025-02-26 00:13:49 (20620): Disabling Clipboard Support for VM.
2025-02-26 00:13:50 (20620): Disabling Drag and Drop Support for VM.
2025-02-26 00:13:50 (20620): Adding storage controller(s) to VM.
2025-02-26 00:13:50 (20620): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-26 00:13:53 (20620): Adding VirtualBox Guest Additions to VM.
2025-02-26 00:13:53 (20620): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-26 00:13:53 (20620): forwarding host port 60179 to guest port 80
2025-02-26 00:13:54 (20620): Enabling remote desktop for VM.
2025-02-26 00:13:54 (20620): Enabling shared directory for VM.
2025-02-26 00:13:55 (20620): Starting VM using VBoxManage interface. (boinc_83226314407a8b3d, slot#5)
2025-02-26 00:14:00 (20620): Successfully started VM. (PID = '21892')
2025-02-26 00:14:00 (20620): Reporting VM Process ID to BOINC.
2025-02-26 00:14:00 (20620): Guest Log: BIOS: VirtualBox 7.0.18
2025-02-26 00:14:00 (20620): Guest Log: CPUID EDX: 0x178bfbff
2025-02-26 00:14:00 (20620): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-26 00:14:00 (20620): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-26 00:14:00 (20620): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-26 00:14:00 (20620): Detected: Web Application Enabled (http://localhost:60179)
2025-02-26 00:14:00 (20620): Detected: Remote Desktop Enabled (localhost:60180)
2025-02-26 00:14:00 (20620): Preference change detected
2025-02-26 00:14:00 (20620): Setting CPU throttle for VM. (100%)
2025-02-26 00:14:01 (20620): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-26 00:14:03 (20620): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-26 00:14:03 (20620): Guest Log: BIOS: Booting from Hard Disk...
2025-02-26 00:14:05 (20620): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-26 00:14:05 (20620): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-26 00:14:05 (20620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-26 00:14:05 (20620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-26 00:14:05 (20620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-26 00:14:05 (20620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-26 00:14:05 (20620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-26 00:14:05 (20620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-26 00:14:05 (20620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-26 00:14:05 (20620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-26 00:14:05 (20620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-26 00:14:05 (20620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-26 00:14:05 (20620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-26 00:14:05 (20620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-26 00:14:05 (20620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-26 00:14:05 (20620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-26 00:14:05 (20620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-26 00:14:05 (20620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-26 00:14:05 (20620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-26 00:14:05 (20620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-26 00:14:05 (20620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-26 00:14:05 (20620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-26 00:14:05 (20620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-26 00:14:05 (20620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-26 00:14:05 (20620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-26 00:14:05 (20620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-26 00:14:05 (20620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-26 00:14:05 (20620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-26 00:14:05 (20620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-26 00:14:05 (20620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-26 00:14:05 (20620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-26 00:14:05 (20620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-26 00:14:11 (20620): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-26 00:14:11 (20620): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-26 00:14:16 (20620): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-26 00:14:16 (20620): Guest Log: 00:00:00.000134 main     Log opened 2025-02-26T00:14:14.312349000Z
2025-02-26 00:14:16 (20620): Guest Log: 00:00:00.000202 main     OS Product: Linux
2025-02-26 00:14:16 (20620): Guest Log: 00:00:00.000229 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-26 00:14:16 (20620): Guest Log: 00:00:00.000251 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-26 00:14:16 (20620): Guest Log: 00:00:00.000273 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-26 00:14:16 (20620): Guest Log: 00:00:00.000274 main     Process ID: 1365
2025-02-26 00:14:16 (20620): Guest Log: 00:00:00.000275 main     Package type: LINUX_64BITS_GENERIC
2025-02-26 00:14:16 (20620): Guest Log: 00:00:00.001787 main     5.2.32 r132073 started. Verbose level = 0
2025-02-26 00:14:16 (20620): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-26 00:14:16 (20620): Guest Log: [INFO] Mounting shared directory
2025-02-26 00:14:16 (20620): Guest Log: [INFO] Checking for init_data.xml
2025-02-26 00:14:26 (20620): Guest Log: 00:00:10.004685 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 802 773 000ns (GuestNow=1 740 525 265 512 549 000 ns GuestLast=1 740 528 854 315 322 000 ns fSetTimeLastLoop=true )
2025-02-26 00:17:28 (20620): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-26 00:17:28 (20620): Guest Log: [INFO] Detected branch: prod
2025-02-26 00:17:28 (20620): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-26 00:17:28 (20620): Guest Log: Copying input files
2025-02-26 00:17:29 (20620): Guest Log: Copied input files into RunAtlas.
2025-02-26 00:17:29 (20620): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-26 00:17:29 (20620): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-26 00:17:29 (20620): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-26 00:17:29 (20620): Guest Log: Further information can be found at the LHC@home message board.
2025-02-26 00:19:53 (20620): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-26 00:19:53 (20620): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-26 00:19:53 (20620): Guest Log: 2.6.3.0 1696 3 32420 143056 4 1 3119916 4096000 0 65024 0 0 n/a 1169 54 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-02-26 00:19:55 (20620): Guest Log: copied the webapp to /var/www
2025-02-26 00:19:55 (20620): Guest Log: ATHENA_PROC_NUMBER=8
2025-02-26 00:19:55 (20620): Guest Log: ATHENA_CORE_NUMBER=8
2025-02-26 00:19:55 (20620): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-26 00:19:55 (20620): Guest Log:  *** Starting ATLAS job. (PandaID=6530434946 taskID=43401163) ***
2025-02-26 00:29:21 (20620): Guest Log:  *** Job finished ***
2025-02-26 00:29:21 (20620): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-26 00:29:21 (20620): Guest Log: 2025-02-25 23:29:10,043 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
2025-02-26 00:29:21 (20620): Guest Log: 2025-02-25 23:29:11,045 | INFO     | [job] queue monitor thread has finished
2025-02-26 00:29:21 (20620): Guest Log: 2025-02-25 23:29:11,097 | INFO     | [data] queue_monitor thread has finished
2025-02-26 00:29:21 (20620): Guest Log: 2025-02-25 23:29:13,152 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140524701660992)>', '<ExcThread(monitor, started 140524241528576)>']
2025-02-26 00:29:21 (20620): Guest Log: 2025-02-25 23:29:13,989 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-26 00:29:21 (20620): Guest Log: 2025-02-25 23:29:13,989 | INFO     | [monitor] control thread has ended
2025-02-26 00:29:21 (20620): Guest Log: 2025-02-25 23:29:18,155 | INFO     | all workflow threads have been joined
2025-02-26 00:29:21 (20620): Guest Log: 2025-02-25 23:29:18,155 | INFO     | end of generic workflow (traces error code: 0)
2025-02-26 00:29:21 (20620): Guest Log: 2025-02-25 23:29:18,155 | INFO     | traces error code: 0
2025-02-26 00:29:21 (20620): Guest Log: 2025-02-25 23:29:18,155 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-26 00:29:21 (20620): Guest Log: 2025-02-25 23:29:18,226 [wrapper] ==== pilot stdout END ====
2025-02-26 00:29:21 (20620): Guest Log: 2025-02-25 23:29:18,231 [wrapper] ==== wrapper stdout RESUME ====
2025-02-26 00:29:21 (20620): Guest Log: 2025-02-25 23:29:18,236 [wrapper] pilotpid: 6106
2025-02-26 00:29:21 (20620): Guest Log: 2025-02-25 23:29:18,240 [wrapper] Pilot exit status: 0
2025-02-26 00:29:21 (20620): Guest Log: 2025-02-25 23:29:18,545 [wrapper] pandaids: 6530434946
2025-02-26 00:29:21 (20620): Guest Log: 2025-02-25 23:29:18,575 [wrapper] cleanup supervisor_pilot  6112 6107
2025-02-26 00:29:21 (20620): Guest Log: 2025-02-25 23:29:18,580 [wrapper] Test setup, not cleaning
2025-02-26 00:29:21 (20620): Guest Log: 2025-02-25 23:29:18,588 [wrapper] apfmon messages muted
2025-02-26 00:29:21 (20620): Guest Log: 2025-02-25 23:29:18,591 [wrapper] ==== wrapper stdout END ====
2025-02-26 00:29:21 (20620): Guest Log: 2025-02-25 23:29:18,595 [wrapper] ==== wrapper stderr END ====
2025-02-26 00:29:21 (20620): Guest Log:  *** Error codes and diagnostics ***
2025-02-26 00:29:21 (20620): Guest Log:     "exeErrorCode": 65,
2025-02-26 00:29:21 (20620): Guest Log:     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
2025-02-26 00:29:21 (20620): Guest Log:     "pilotErrorCode": 1305,
2025-02-26 00:29:21 (20620): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute 2025-02-25 23:26:55,231 CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
2025-02-26 00:29:21 (20620): Guest Log:  *** Listing of results directory ***
2025-02-26 00:29:21 (20620): Guest Log: total 3848
2025-02-26 00:29:21 (20620): Guest Log: -rw-r--r--. 1 atlas atlas  491065 Feb 25 14:02 pilot3.tar.gz
2025-02-26 00:29:21 (20620): Guest Log: -rw-r--r--. 1 atlas atlas    5118 Feb 25 14:29 queuedata.json
2025-02-26 00:29:21 (20620): Guest Log: -rwx------. 1 atlas atlas   35865 Feb 25 14:29 runpilot2-wrapper.sh
2025-02-26 00:29:21 (20620): Guest Log: -rwxr-xr-x. 1 atlas atlas    9129 Feb 25 23:17 init_data.xml
2025-02-26 00:29:21 (20620): Guest Log: -rwxr-xr-x. 1 atlas atlas  503546 Feb 25 23:17 input.tar.gz
2025-02-26 00:29:21 (20620): Guest Log: -rwxr-xr-x. 1 atlas atlas   17569 Feb 25 23:17 start_atlas.sh
2025-02-26 00:29:21 (20620): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Feb 25 23:17 EVNT.43401161._000028.pool.root.1 -> /data/./ATLAS.root_0
2025-02-26 00:29:21 (20620): Guest Log: -rw-r--r--. 1 atlas atlas    2539 Feb 25 23:19 pandaJob.out
2025-02-26 00:29:21 (20620): Guest Log: -rw-------. 1 atlas atlas     424 Feb 25 23:20 setup.sh.local
2025-02-26 00:29:21 (20620): Guest Log: -rw-------. 1 atlas atlas  987490 Feb 25 23:23 agis_schedconf.cvmfs.json
2025-02-26 00:29:21 (20620): Guest Log: -rw-------. 1 atlas atlas 1573632 Feb 25 23:23 agis_ddmendpoints.agis.ALL.json
2025-02-26 00:29:21 (20620): Guest Log: drwx------. 4 atlas atlas    4096 Feb 25 23:23 pilot3
2025-02-26 00:29:21 (20620): Guest Log: -rw-------. 1 atlas atlas    1009 Feb 25 23:26 memory_monitor_summary.json
2025-02-26 00:29:21 (20620): Guest Log: -rw-------. 1 atlas atlas   20713 Feb 25 23:27 log.43401163._000700.job.log.tgz.1
2025-02-26 00:29:21 (20620): Guest Log: -rw-------. 1 atlas atlas      95 Feb 25 23:28 pilot_heartbeat.json
2025-02-26 00:29:21 (20620): Guest Log: -rw-------. 1 atlas atlas    8437 Feb 25 23:29 heartbeat.json
2025-02-26 00:29:21 (20620): Guest Log: -rw-------. 1 atlas atlas    4275 Feb 25 23:29 pilotlog.txt
2025-02-26 00:29:21 (20620): Guest Log: -rw-------. 1 atlas atlas   84946 Feb 25 23:29 log.43401163._000700.job.log.1
2025-02-26 00:29:21 (20620): Guest Log: -rw-------. 1 atlas atlas     188 Feb 25 23:29 output.list
2025-02-26 00:29:21 (20620): Guest Log: -rw-r--r--. 1 atlas atlas     620 Feb 25 23:29 runtime_log
2025-02-26 00:29:21 (20620): Guest Log: -rw-------. 1 atlas atlas  122880 Feb 25 23:29 result.tar.gz
2025-02-26 00:29:21 (20620): Guest Log: -rw-r--r--. 1 atlas atlas   10830 Feb 25 23:29 runtime_log.err
2025-02-26 00:29:21 (20620): Guest Log: -rw-------. 1 atlas atlas     655 Feb 25 23:29 3QwMDmX7A76nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmxjwKDmSSdtAo.diag
2025-02-26 00:29:21 (20620): Guest Log: Looking for outputfile HITS.43401163._000700.pool.root.1
2025-02-26 00:29:21 (20620): Guest Log: No HITS file was produced
2025-02-26 00:29:21 (20620): Guest Log: Successfully finished the ATLAS job!
2025-02-26 00:29:21 (20620): Guest Log: Copying the results back to the shared directory!
2025-02-26 00:29:21 (20620): Guest Log:  *** Contents of shared directory: ***
2025-02-26 00:29:21 (20620): Guest Log: total 245612
2025-02-26 00:29:21 (20620): Guest Log: -rwxrwxrwx. 1 root root 250846743 Feb 25 23:13 ATLAS.root_0
2025-02-26 00:29:21 (20620): Guest Log: -rwxrwxrwx. 1 root root      9129 Feb 25 23:13 init_data.xml
2025-02-26 00:29:21 (20620): Guest Log: -rwxrwxrwx. 1 root root    503546 Feb 25 16:27 input.tar.gz
2025-02-26 00:29:21 (20620): Guest Log: -rwxrwxrwx. 1 root root    122880 Feb 25 23:29 result.tar.gz
2025-02-26 00:29:21 (20620): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb 25 16:27 start_atlas.sh
2025-02-26 00:29:21 (20620): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-26 00:29:21 (20620): VM Completion File Detected.
2025-02-26 00:29:21 (20620): Powering off VM.
2025-02-26 00:29:23 (20620): Successfully stopped VM.
2025-02-26 00:29:23 (20620): Deregistering VM. (boinc_83226314407a8b3d, slot#5)
2025-02-26 00:29:23 (20620): Removing network bandwidth throttle group from VM.
2025-02-26 00:29:23 (20620): Removing VM from VirtualBox.
00:29:28 (20620): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN