Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:17:44 (18017): wrapper (7.7.26015): starting
11:17:44 (18017): wrapper: running run_atlas (--nthreads 12)
[2025-02-25 11:17:44] Arguments: --nthreads 12
[2025-02-25 11:17:44] Threads: 12
[2025-02-25 11:17:44] Checking for CVMFS
[2025-02-25 11:17:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 11:17:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 11:17:45] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 11:17:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 11:17:45] 2.11.2.0 3124 7032 120412 143044 2 56 8507121 20275200 1 130560 0 5215087 99.797 2406962 27177 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-25 11:17:45] CVMFS is ok
[2025-02-25 11:17:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 11:17:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 11:17:45] Further information can be found at the LHC@home message board.
[2025-02-25 11:17:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 11:17:45] Checking for apptainer binary...
[2025-02-25 11:17:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 11:17:45] Running /usr/bin/apptainer --version
[2025-02-25 11:17:45] apptainer version 1.3.2-1.el7
[2025-02-25 11:17:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 11:17:46] c-205-29.aglt2.org
[2025-02-25 11:17:46] apptainer works
[2025-02-25 11:17:46] Set ATHENA_PROC_NUMBER=12
[2025-02-25 11:17:46] Set ATHENA_CORE_NUMBER=12
[2025-02-25 11:17:46] Starting ATLAS job with PandaID=6530424636
[2025-02-25 11:17:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 12:40:23]  *** The last 200 lines of the pilot log: ***
[2025-02-25 12:40:23]  lfn=log.43401137._001227.job.log.tgz.1
[2025-02-25 12:40:23]  mtime=0
[2025-02-25 12:40:23]  protocol_id=None
[2025-02-25 12:40:23]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-25 12:40:23]  replicas=None
[2025-02-25 12:40:23]  scope=mc23_13p6TeV
[2025-02-25 12:40:23]  status=None
[2025-02-25 12:40:23]  status_code=0
[2025-02-25 12:40:23]  storage_token=
[2025-02-25 12:40:23]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6530424636/log.43401137._001227.job.log.tgz.1
[2025-02-25 12:40:23]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0a/e4/log.43401137._001227.job.log.tgz.1
[2025-02-25 12:40:23]  workdir=None
[2025-02-25 12:40:23] ]
[2025-02-25 12:40:23] 2025-02-25 17:39:55,327 | INFO     | transferring file log.43401137._001227.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6530424636/log.43401137._001227.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-02-25 12:40:23] 2025-02-25 17:39:55,327 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6530424636/log.43401137._001227.job.log.tgz.1 /tmp/boinchome/slots/0/log.43401137._001227.job
[2025-02-25 12:40:23] 2025-02-25 17:39:55,350 | INFO     | adding to output.list: log.43401137._001227.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0a/e4/log.43401137._001227.job.log.tg
[2025-02-25 12:40:23] 2025-02-25 17:39:55,351 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-25 12:40:23] 2025-02-25 17:39:55,352 | INFO     | summary of transferred files:
[2025-02-25 12:40:23] 2025-02-25 17:39:55,352 | INFO     |  -- lfn=log.43401137._001227.job.log.tgz.1, status_code=0, status=transferred
[2025-02-25 12:40:23] 2025-02-25 17:39:55,352 | INFO     | stage-out finished correctly
[2025-02-25 12:40:23] 2025-02-25 17:39:55,440 | INFO     | monitor loop #360: job 0:6530424636 is in state 'finished'
[2025-02-25 12:40:23] 2025-02-25 17:39:55,440 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 12:40:23] 2025-02-25 17:39:55,953 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-25 12:40:23] 2025-02-25 17:39:57,943 | INFO     | monitor loop #361: job 0:6530424636 is in state 'finished'
[2025-02-25 12:40:23] 2025-02-25 17:39:57,952 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 12:40:23] 2025-02-25 17:39:58,123 | INFO     | job 6530424636 has state=finished
[2025-02-25 12:40:23] 2025-02-25 17:39:58,123 | INFO     | preparing for final server update for job 6530424636 in state='finished'
[2025-02-25 12:40:23] 2025-02-25 17:39:58,124 | INFO     | this job has now completed (state=finished)
[2025-02-25 12:40:23] 2025-02-25 17:39:58,124 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-25 12:40:23] 2025-02-25 17:39:58,124 | INFO     | log transfer has been attempted: DONE
[2025-02-25 12:40:23] 2025-02-25 17:39:58,124 | INFO     | job 6530424636 has finished - writing final server update
[2025-02-25 12:40:23] 2025-02-25 17:39:58,124 | INFO     | total number of processed events: 400 (read)
[2025-02-25 12:40:23] 2025-02-25 17:39:58,126 | INFO     | executing command: lscpu
[2025-02-25 12:40:23] 2025-02-25 17:39:58,160 | INFO     | found 12 cores (6 cores per socket, 2 sockets)
[2025-02-25 12:40:23] 2025-02-25 17:39:58,174 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-25 12:40:23] 2025-02-25 17:40:00,455 | INFO     | monitor loop #362: job 0:6530424636 is in state 'finished'
[2025-02-25 12:40:23] 2025-02-25 17:40:00,455 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 12:40:23] 2025-02-25 17:40:01,906 | INFO     | PID=21607 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-02-25 12:40:23] 2025-02-25 17:40:02,958 | INFO     | monitor loop #363: job 0:6530424636 is in state 'finished'
[2025-02-25 12:40:23] 2025-02-25 17:40:02,958 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 12:40:23] 2025-02-25 17:40:03,090 | INFO     | CPU arch script returned: x86-64-v2
[2025-02-25 12:40:23] 2025-02-25 17:40:03,090 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6530424636/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 12:40:23] 2025-02-25 17:40:03,091 | INFO     | extracted standard info from prmon json
[2025-02-25 12:40:23] 2025-02-25 17:40:03,091 | INFO     | extracted standard memory fields from prmon json
[2025-02-25 12:40:23] 2025-02-25 17:40:03,091 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-25 12:40:23] 2025-02-25 17:40:03,092 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 12:40:23] 2025-02-25 17:40:03,092 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 12:40:23] 2025-02-25 17:40:03,094 | INFO     | fitting pss+swap vs Time
[2025-02-25 12:40:23] 2025-02-25 17:40:03,095 | INFO     | model: linear, x: [1740500614.0, 1740500675.0, 1740500736.0, 1740500797.0, 1740500858.0, 1740500919.0, 1740500980.0, 1740501041.0, 1740501102.0, 1740501163.0, 1740
[2025-02-25 12:40:23] 2025-02-25 17:40:03,095 | INFO     | sum of square deviations: 125630262.5
[2025-02-25 12:40:23] 2025-02-25 17:40:03,095 | INFO     | sum of deviations: 27044665949.499996
[2025-02-25 12:40:23] 2025-02-25 17:40:03,096 | INFO     | mean x: 1740502840.5
[2025-02-25 12:40:23] 2025-02-25 17:40:03,096 | INFO     | mean y: 2601715.0675675673
[2025-02-25 12:40:23] 2025-02-25 17:40:03,096 | INFO     | -- intersect: -374678760631.6709
[2025-02-25 12:40:23] 2025-02-25 17:40:03,096 | INFO     | intersect: -374678760631.6709
[2025-02-25 12:40:23] 2025-02-25 17:40:03,097 | INFO     | chi2: 2.7598873650757985
[2025-02-25 12:40:23] 2025-02-25 17:40:03,097 | INFO     | -- intersect: -374678760631.6709
[2025-02-25 12:40:23] 2025-02-25 17:40:03,097 | INFO     | current memory leak: 215.27 B/s (using 74 data points, chi2=2.76)
[2025-02-25 12:40:23] 2025-02-25 17:40:03,097 | INFO     | ..............................
[2025-02-25 12:40:23] 2025-02-25 17:40:03,098 | INFO     | . Timing measurements:
[2025-02-25 12:40:23] 2025-02-25 17:40:03,098 | INFO     | . get job = 0 s
[2025-02-25 12:40:23] 2025-02-25 17:40:03,098 | INFO     | . initial setup = 2 s
[2025-02-25 12:40:23] 2025-02-25 17:40:03,098 | INFO     | . payload setup = 7 s
[2025-02-25 12:40:23] 2025-02-25 17:40:03,098 | INFO     | . stage-in = 0 s
[2025-02-25 12:40:23] 2025-02-25 17:40:03,098 | INFO     | . payload execution = 4887 s
[2025-02-25 12:40:23] 2025-02-25 17:40:03,099 | INFO     | . stage-out = 0 s
[2025-02-25 12:40:23] 2025-02-25 17:40:03,099 | INFO     | . log creation = 0 s
[2025-02-25 12:40:23] 2025-02-25 17:40:03,099 | INFO     | ..............................
[2025-02-25 12:40:23] 2025-02-25 17:40:03,182 | INFO     | 
[2025-02-25 12:40:23] 2025-02-25 17:40:03,182 | INFO     | job summary report
[2025-02-25 12:40:23] 2025-02-25 17:40:03,182 | INFO     | --------------------------------------------------
[2025-02-25 12:40:23] 2025-02-25 17:40:03,182 | INFO     | PanDA job id: 6530424636
[2025-02-25 12:40:23] 2025-02-25 17:40:03,182 | INFO     | task id: 43401137
[2025-02-25 12:40:23] 2025-02-25 17:40:03,183 | INFO     | errors: (none)
[2025-02-25 12:40:23] 2025-02-25 17:40:03,183 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 12:40:23] 2025-02-25 17:40:03,183 | INFO     | pilot state: finished 
[2025-02-25 12:40:23] 2025-02-25 17:40:03,183 | INFO     | transexitcode: 0
[2025-02-25 12:40:23] 2025-02-25 17:40:03,183 | INFO     | exeerrorcode: 0
[2025-02-25 12:40:23] 2025-02-25 17:40:03,183 | INFO     | exeerrordiag: 
[2025-02-25 12:40:23] 2025-02-25 17:40:03,183 | INFO     | exitcode: 0
[2025-02-25 12:40:23] 2025-02-25 17:40:03,183 | INFO     | exitmsg: OK
[2025-02-25 12:40:23] 2025-02-25 17:40:03,183 | INFO     | cpuconsumptiontime: 46322 s
[2025-02-25 12:40:23] 2025-02-25 17:40:03,184 | INFO     | nevents: 400
[2025-02-25 12:40:23] 2025-02-25 17:40:03,184 | INFO     | neventsw: 0
[2025-02-25 12:40:23] 2025-02-25 17:40:03,184 | INFO     | pid: 28022
[2025-02-25 12:40:23] 2025-02-25 17:40:03,184 | INFO     | pgrp: 28022
[2025-02-25 12:40:23] 2025-02-25 17:40:03,184 | INFO     | corecount: 12
[2025-02-25 12:40:23] 2025-02-25 17:40:03,184 | INFO     | event service: False
[2025-02-25 12:40:23] 2025-02-25 17:40:03,184 | INFO     | sizes: {0: 2376960, 5: 2377166, 11: 2377222, 4899: 2403277, 4900: 2412218, 4901: 2412274, 4908: 2412572}
[2025-02-25 12:40:23] 2025-02-25 17:40:03,184 | INFO     | --------------------------------------------------
[2025-02-25 12:40:23] 2025-02-25 17:40:03,184 | INFO     | 
[2025-02-25 12:40:23] 2025-02-25 17:40:03,185 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-25 12:40:23] 2025-02-25 17:40:03,207 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 12:40:23] 2025-02-25 17:40:03,208 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 12:40:23] 2025-02-25 17:40:03,208 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 12:40:23] 2025-02-25 17:40:03,208 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 12:40:23] 2025-02-25 17:40:03,208 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 12:40:23] 2025-02-25 17:40:03,208 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 12:40:23] 2025-02-25 17:40:03,208 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 12:40:23] 2025-02-25 17:40:03,209 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 12:40:23] 2025-02-25 17:40:03,209 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 12:40:23] 2025-02-25 17:40:03,209 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 12:40:23] 2025-02-25 17:40:03,209 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 12:40:23] 2025-02-25 17:40:03,209 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 12:40:23] 2025-02-25 17:40:03,210 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 12:40:23] 2025-02-25 17:40:03,210 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 12:40:23] 2025-02-25 17:40:03,210 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 12:40:23] 2025-02-25 17:40:03,210 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 12:40:23] 2025-02-25 17:40:03,210 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 12:40:23] 2025-02-25 17:40:03,210 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 12:40:23] 2025-02-25 17:40:03,210 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 12:40:23] 2025-02-25 17:40:03,210 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 12:40:23] 2025-02-25 17:40:03,210 | INFO     | job 6530424636 has completed (purged errors)
[2025-02-25 12:40:23] 2025-02-25 17:40:03,211 | INFO     | overall cleanup function is called
[2025-02-25 12:40:23] 2025-02-25 17:40:04,218 | INFO     | --- collectZombieJob: --- 10, [28022]
[2025-02-25 12:40:23] 2025-02-25 17:40:04,219 | INFO     | zombie collector waiting for pid 28022
[2025-02-25 12:40:23] 2025-02-25 17:40:04,219 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 12:40:23] 2025-02-25 17:40:04,219 | INFO     | collected zombie processes
[2025-02-25 12:40:23] 2025-02-25 17:40:04,219 | INFO     | will attempt to kill all subprocesses of pid=28022
[2025-02-25 12:40:23] 2025-02-25 17:40:04,282 | INFO     | process IDs to be killed: [28022] (in reverse order)
[2025-02-25 12:40:23] 2025-02-25 17:40:04,334 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 12:40:23] 2025-02-25 17:40:04,335 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 12:40:23] 2025-02-25 17:40:04,338 | INFO     | did not find any defunct processes belonging to 28022
[2025-02-25 12:40:23] 2025-02-25 17:40:04,341 | INFO     | did not find any defunct processes belonging to 28022
[2025-02-25 12:40:23] 2025-02-25 17:40:04,341 | INFO     | ready for new job
[2025-02-25 12:40:23] 2025-02-25 17:40:04,341 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 12:40:23] 2025-02-25 17:40:04,342 | INFO     | **************************************
[2025-02-25 12:40:23] 2025-02-25 17:40:04,342 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 12:40:23] 2025-02-25 17:40:04,343 | INFO     | **************************************
[2025-02-25 12:40:23] 2025-02-25 17:40:04,343 | INFO     | 
[2025-02-25 12:40:23] 2025-02-25 17:40:04,343 | INFO     | architecture information:
[2025-02-25 12:40:23] 2025-02-25 17:40:04,344 | INFO     | executing command: cat /etc/os-release
[2025-02-25 12:40:23] 2025-02-25 17:40:04,359 | INFO     | cat /etc/os-release:
[2025-02-25 12:40:23] NAME="CentOS Linux"
[2025-02-25 12:40:23] VERSION="7 (Core)"
[2025-02-25 12:40:23] ID="centos"
[2025-02-25 12:40:23] ID_LIKE="rhel fedora"
[2025-02-25 12:40:23] VERSION_ID="7"
[2025-02-25 12:40:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 12:40:23] ANSI_COLOR="0;31"
[2025-02-25 12:40:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 12:40:23] HOME_URL="https://www.centos.org/"
[2025-02-25 12:40:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 12:40:23] 
[2025-02-25 12:40:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 12:40:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 12:40:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 12:40:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 12:40:23] 
[2025-02-25 12:40:23] 2025-02-25 17:40:04,359 | INFO     | **************************************
[2025-02-25 12:40:23] 2025-02-25 17:40:04,862 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-25 12:40:23] 2025-02-25 17:40:04,879 | INFO     | sufficient remaining disk space (29359079424 B)
[2025-02-25 12:40:23] 2025-02-25 17:40:04,879 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 12:40:23] 2025-02-25 17:40:04,879 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 12:40:23] 2025-02-25 17:40:04,880 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 12:40:23] 2025-02-25 17:40:04,880 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 12:40:23] 2025-02-25 17:40:04,880 | INFO     | aborting loop
[2025-02-25 12:40:23] 2025-02-25 17:40:04,880 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-25 12:40:23] 2025-02-25 17:40:04,881 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 12:40:23] 2025-02-25 17:40:04,881 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 12:40:23] 2025-02-25 17:40:04,881 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 12:40:23] 2025-02-25 17:40:05,209 | INFO     | all job control threads have been joined
[2025-02-25 12:40:23] 2025-02-25 17:40:05,471 | INFO     | all data control threads have been joined
[2025-02-25 12:40:23] 2025-02-25 17:40:05,885 | INFO     | [job] retrieve thread has finished
[2025-02-25 12:40:23] 2025-02-25 17:40:05,885 | INFO     | [job] queue monitor thread has finished
[2025-02-25 12:40:23] 2025-02-25 17:40:05,886 | INFO     | [job] job monitor thread has finished
[2025-02-25 12:40:23] 2025-02-25 17:40:05,952 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 12:40:23] 2025-02-25 17:40:06,082 | INFO     | all payload control threads have been joined
[2025-02-25 12:40:23] 2025-02-25 17:40:06,173 | INFO     | [payload] failed_post thread has finished
[2025-02-25 12:40:23] 2025-02-25 17:40:06,214 | INFO     | [job] control thread has finished
[2025-02-25 12:40:23] 2025-02-25 17:40:06,462 | INFO     | [data] copytool_in thread has finished
[2025-02-25 12:40:23] 2025-02-25 17:40:06,476 | INFO     | [data] control thread has finished
[2025-02-25 12:40:23] 2025-02-25 17:40:06,541 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 12:40:23] 2025-02-25 17:40:06,741 | INFO     | [payload] validate_post thread has finished
[2025-02-25 12:40:23] 2025-02-25 17:40:07,088 | INFO     | [payload] control thread has finished
[2025-02-25 12:40:23] 2025-02-25 17:40:07,151 | INFO     | [job] validate thread has finished
[2025-02-25 12:40:23] 2025-02-25 17:40:07,224 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 12:40:23] 2025-02-25 17:40:07,330 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 12:40:23] 2025-02-25 17:40:07,342 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 12:40:23] 2025-02-25 17:40:07,957 | INFO     | [data] copytool_out thread has finished
[2025-02-25 12:40:23] 2025-02-25 17:40:10,547 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 12:40:23] 2025-02-25 17:40:15,714 | INFO     | job.realtimelogging is not enabled
[2025-02-25 12:40:23] 2025-02-25 17:40:16,719 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 12:40:23] 2025-02-25 17:40:18,020 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139669398685504)>', '<ExcThread(monitor, started 139668838409984)>']
[2025-02-25 12:40:23] 2025-02-25 17:40:18,948 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 12:40:23] 2025-02-25 17:40:18,949 | INFO     | [monitor] control thread has ended
[2025-02-25 12:40:23] 2025-02-25 17:40:23,045 | INFO     | all workflow threads have been joined
[2025-02-25 12:40:23] 2025-02-25 17:40:23,046 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 12:40:23] 2025-02-25 17:40:23,046 | INFO     | traces error code: 0
[2025-02-25 12:40:23] 2025-02-25 17:40:23,046 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 12:40:23] 2025-02-25 17:40:23,131 [wrapper] ==== pilot stdout END ====
[2025-02-25 12:40:23] 2025-02-25 17:40:23,135 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 12:40:23] 2025-02-25 17:40:23,139 [wrapper] pilotpid: 21607
[2025-02-25 12:40:23] 2025-02-25 17:40:23,143 [wrapper] Pilot exit status: 0
[2025-02-25 12:40:23] 2025-02-25 17:40:23,159 [wrapper] pandaids: 6530424636
[2025-02-25 12:40:23] 2025-02-25 17:40:23,196 [wrapper] cleanup supervisor_pilot 15379 21608
[2025-02-25 12:40:23] 2025-02-25 17:40:23,200 [wrapper] Test setup, not cleaning
[2025-02-25 12:40:23] 2025-02-25 17:40:23,209 [wrapper] apfmon messages muted
[2025-02-25 12:40:23] 2025-02-25 17:40:23,212 [wrapper] ==== wrapper stdout END ====
[2025-02-25 12:40:23] 2025-02-25 17:40:23,216 [wrapper] ==== wrapper stderr END ====
[2025-02-25 12:40:23]  *** Error codes and diagnostics ***
[2025-02-25 12:40:23]     "exeErrorCode": 0,
[2025-02-25 12:40:23]     "exeErrorDiag": "",
[2025-02-25 12:40:23]     "pilotErrorCode": 0,
[2025-02-25 12:40:23]     "pilotErrorDiag": "",
[2025-02-25 12:40:23]  *** Listing of results directory ***
[2025-02-25 12:40:23] total 434720
[2025-02-25 12:40:23] -rw-r--r-- 1 boincer umatlas    491065 Feb 25 09:02 pilot3.tar.gz
[2025-02-25 12:40:23] -rwx------ 1 boincer umatlas     35865 Feb 25 09:20 runpilot2-wrapper.sh
[2025-02-25 12:40:23] -rw-r--r-- 1 boincer umatlas      5118 Feb 25 09:21 queuedata.json
[2025-02-25 12:40:23] -rw-r--r-- 1 boincer umatlas       100 Feb 25 11:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 12:40:23] -rwxr-xr-x 1 boincer umatlas      7986 Feb 25 11:17 run_atlas
[2025-02-25 12:40:23] -rw-r--r-- 1 boincer umatlas       105 Feb 25 11:17 job.xml
[2025-02-25 12:40:23] -rw-r--r-- 2 boincer umatlas 252502785 Feb 25 11:17 EVNT.43401135._000061.pool.root.1
[2025-02-25 12:40:23] drwxrwx--x 2 boincer umatlas      4096 Feb 25 11:17 shared
[2025-02-25 12:40:23] -rw-r--r-- 2 boincer umatlas    503554 Feb 25 11:17 input.tar.gz
[2025-02-25 12:40:23] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 11:17 start_atlas.sh
[2025-02-25 12:40:23] -rw-r--r-- 1 boincer umatlas         0 Feb 25 11:17 boinc_lockfile
[2025-02-25 12:40:23] -rw-r--r-- 1 boincer umatlas      2558 Feb 25 11:17 pandaJob.out
[2025-02-25 12:40:23] -rw------- 1 boincer umatlas       424 Feb 25 11:17 setup.sh.local
[2025-02-25 12:40:23] -rw------- 1 boincer umatlas    988282 Feb 25 11:17 agis_schedconf.cvmfs.json
[2025-02-25 12:40:23] -rw------- 1 boincer umatlas   1577983 Feb 25 11:17 agis_ddmendpoints.agis.ALL.json
[2025-02-25 12:40:23] drwx------ 4 boincer umatlas      4096 Feb 25 11:17 pilot3
[2025-02-25 12:40:23] -rw-r--r-- 1 boincer umatlas      5868 Feb 25 12:37 init_data.xml
[2025-02-25 12:40:23] -rw------- 1 boincer umatlas 187170312 Feb 25 12:39 HITS.43401137._001227.pool.root.1
[2025-02-25 12:40:23] -rw------- 1 boincer umatlas      1045 Feb 25 12:39 memory_monitor_summary.json
[2025-02-25 12:40:23] -rw------- 1 boincer umatlas    381625 Feb 25 12:39 log.43401137._001227.job.log.tgz.1
[2025-02-25 12:40:23] -rw-r--r-- 1 boincer umatlas      8192 Feb 25 12:39 boinc_mmap_file
[2025-02-25 12:40:23] -rw-r--r-- 1 boincer umatlas        27 Feb 25 12:39 wrapper_checkpoint.txt
[2025-02-25 12:40:23] -rw------- 1 boincer umatlas        95 Feb 25 12:39 pilot_heartbeat.json
[2025-02-25 12:40:23] -rw-r--r-- 1 boincer umatlas       529 Feb 25 12:40 boinc_task_state.xml
[2025-02-25 12:40:23] -rw------- 1 boincer umatlas      7759 Feb 25 12:40 heartbeat.json
[2025-02-25 12:40:23] -rw------- 1 boincer umatlas      4410 Feb 25 12:40 pilotlog.txt
[2025-02-25 12:40:23] -rw------- 1 boincer umatlas    460938 Feb 25 12:40 log.43401137._001227.job.log.1
[2025-02-25 12:40:23] -rw------- 1 boincer umatlas       357 Feb 25 12:40 output.list
[2025-02-25 12:40:23] -rw-r--r-- 1 boincer umatlas       620 Feb 25 12:40 runtime_log
[2025-02-25 12:40:23] -rw------- 1 boincer umatlas    860160 Feb 25 12:40 result.tar.gz
[2025-02-25 12:40:23] -rw-r--r-- 1 boincer umatlas     11015 Feb 25 12:40 runtime_log.err
[2025-02-25 12:40:23] -rw------- 1 boincer umatlas       658 Feb 25 12:40 GgKLDmFyA76nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmbcwKDmouPkPn.diag
[2025-02-25 12:40:23] -rw-r--r-- 1 boincer umatlas     21808 Feb 25 12:40 stderr.txt
[2025-02-25 12:40:23] HITS file was successfully produced:
[2025-02-25 12:40:23] -rw------- 1 boincer umatlas 187170312 Feb 25 12:39 shared/HITS.pool.root.1
[2025-02-25 12:40:23]  *** Contents of shared directory: ***
[2025-02-25 12:40:23] total 430724
[2025-02-25 12:40:23] -rw-r--r-- 2 boincer umatlas 252502785 Feb 25 11:17 ATLAS.root_0
[2025-02-25 12:40:23] -rw-r--r-- 2 boincer umatlas    503554 Feb 25 11:17 input.tar.gz
[2025-02-25 12:40:23] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 11:17 start_atlas.sh
[2025-02-25 12:40:23] -rw------- 1 boincer umatlas 187170312 Feb 25 12:39 HITS.pool.root.1
[2025-02-25 12:40:23] -rw------- 1 boincer umatlas    860160 Feb 25 12:40 result.tar.gz
12:40:25 (18017): run_atlas exited; CPU time 46290.096792
12:40:25 (18017): called boinc_finish(0)

</stderr_txt>
]]>

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