Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:13:05 (19938): wrapper (7.7.26015): starting
11:13:05 (19938): wrapper: running run_atlas (--nthreads 12)
[2025-02-25 11:13:05] Arguments: --nthreads 12
[2025-02-25 11:13:05] Threads: 12
[2025-02-25 11:13:05] Checking for CVMFS
[2025-02-25 11:13:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 11:13:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 11:13:05] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 11:13:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 11:13:05] 2.11.2.0 10995 118208 138104 143043 2 58 14198696 20275201 1 130560 0 24263630 99.985 7793545 40888 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-25 11:13:05] CVMFS is ok
[2025-02-25 11:13:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 11:13:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 11:13:05] Further information can be found at the LHC@home message board.
[2025-02-25 11:13:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 11:13:05] Checking for apptainer binary...
[2025-02-25 11:13:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 11:13:05] Running /usr/bin/apptainer --version
[2025-02-25 11:13:05] apptainer version 1.3.2-1.el7
[2025-02-25 11:13:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 11:13:07] c-205-22.aglt2.org
[2025-02-25 11:13:07] apptainer works
[2025-02-25 11:13:07] Set ATHENA_PROC_NUMBER=12
[2025-02-25 11:13:07] Set ATHENA_CORE_NUMBER=12
[2025-02-25 11:13:07] Starting ATLAS job with PandaID=6530459363
[2025-02-25 11:13:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 12:34:12]  *** The last 200 lines of the pilot log: ***
[2025-02-25 12:34:12]  is_tar=False
[2025-02-25 12:34:12]  lfn=log.43401121._002035.job.log.tgz.1
[2025-02-25 12:34:12]  mtime=0
[2025-02-25 12:34:12]  protocol_id=None
[2025-02-25 12:34:12]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-25 12:34:12]  replicas=None
[2025-02-25 12:34:12]  scope=mc23_13p6TeV
[2025-02-25 12:34:12]  status=None
[2025-02-25 12:34:12]  status_code=0
[2025-02-25 12:34:12]  storage_token=
[2025-02-25 12:34:12]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6530459363/log.43401121._002035.job.log.tgz.1
[2025-02-25 12:34:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/30/a7/log.43401121._002035.job.log.tgz.1
[2025-02-25 12:34:12]  workdir=None
[2025-02-25 12:34:12] ]
[2025-02-25 12:34:12] 2025-02-25 17:33:48,940 | INFO     | transferring file log.43401121._002035.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6530459363/log.43401121._002035.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-02-25 12:34:12] 2025-02-25 17:33:48,940 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6530459363/log.43401121._002035.job.log.tgz.1 /tmp/boinchome/slots/0/log.43401121._002035.job
[2025-02-25 12:34:12] 2025-02-25 17:33:48,966 | INFO     | adding to output.list: log.43401121._002035.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/30/a7/log.43401121._002035.job.log.tg
[2025-02-25 12:34:12] 2025-02-25 17:33:48,967 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-25 12:34:12] 2025-02-25 17:33:48,967 | INFO     | summary of transferred files:
[2025-02-25 12:34:12] 2025-02-25 17:33:48,968 | INFO     |  -- lfn=log.43401121._002035.job.log.tgz.1, status_code=0, status=transferred
[2025-02-25 12:34:12] 2025-02-25 17:33:48,968 | INFO     | stage-out finished correctly
[2025-02-25 12:34:12] 2025-02-25 17:33:51,125 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-25 12:34:12] 2025-02-25 17:33:52,015 | WARNING  | process 29890 can no longer be monitored (due to stat problems) - aborting
[2025-02-25 12:34:12] 2025-02-25 17:33:52,016 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6530459363/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 12:34:12] 2025-02-25 17:33:52,077 | INFO     | number of running child processes to parent process 29890: 1
[2025-02-25 12:34:12] 2025-02-25 17:33:52,077 | INFO     | maximum number of monitored processes: 6
[2025-02-25 12:34:12] 2025-02-25 17:33:54,184 | INFO     | job 6530459363 has state=finished
[2025-02-25 12:34:12] 2025-02-25 17:33:54,184 | INFO     | preparing for final server update for job 6530459363 in state='finished'
[2025-02-25 12:34:12] 2025-02-25 17:33:54,258 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-02-25 12:34:12] 2025-02-25 17:33:54,258 | INFO     | this job has now completed (state=finished)
[2025-02-25 12:34:12] 2025-02-25 17:33:54,259 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-25 12:34:12] 2025-02-25 17:33:54,259 | INFO     | log transfer has been attempted: DONE
[2025-02-25 12:34:12] 2025-02-25 17:33:54,259 | INFO     | job 6530459363 has finished - writing final server update
[2025-02-25 12:34:12] 2025-02-25 17:33:54,259 | INFO     | total number of processed events: 400 (read)
[2025-02-25 12:34:12] 2025-02-25 17:33:54,260 | INFO     | executing command: lscpu
[2025-02-25 12:34:12] 2025-02-25 17:33:54,288 | INFO     | found 12 cores (6 cores per socket, 2 sockets)
[2025-02-25 12:34:12] 2025-02-25 17:33:54,303 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-25 12:34:12] 2025-02-25 17:33:54,580 | INFO     | monitor loop #355: job 0:6530459363 is in state 'finished'
[2025-02-25 12:34:12] 2025-02-25 17:33:54,580 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 12:34:12] 2025-02-25 17:33:55,862 | INFO     | PID=23539 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-02-25 12:34:12] 2025-02-25 17:33:57,083 | INFO     | monitor loop #356: job 0:6530459363 is in state 'finished'
[2025-02-25 12:34:12] 2025-02-25 17:33:57,083 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 12:34:12] 2025-02-25 17:33:59,312 | INFO     | CPU arch script returned: x86-64-v2
[2025-02-25 12:34:12] 2025-02-25 17:33:59,320 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6530459363/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 12:34:12] 2025-02-25 17:33:59,321 | INFO     | extracted standard info from prmon json
[2025-02-25 12:34:12] 2025-02-25 17:33:59,321 | INFO     | extracted standard memory fields from prmon json
[2025-02-25 12:34:12] 2025-02-25 17:33:59,321 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-25 12:34:12] 2025-02-25 17:33:59,321 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 12:34:12] 2025-02-25 17:33:59,322 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 12:34:12] 2025-02-25 17:33:59,323 | INFO     | fitting pss+swap vs Time
[2025-02-25 12:34:12] 2025-02-25 17:33:59,323 | INFO     | model: linear, x: [1740500334.0, 1740500395.0, 1740500456.0, 1740500517.0, 1740500578.0, 1740500639.0, 1740500700.0, 1740500761.0, 1740500822.0, 1740500883.0, 1740
[2025-02-25 12:34:12] 2025-02-25 17:33:59,324 | INFO     | sum of square deviations: 115715658.0
[2025-02-25 12:34:12] 2025-02-25 17:33:59,324 | INFO     | sum of deviations: 27358623525.000004
[2025-02-25 12:34:12] 2025-02-25 17:33:59,324 | INFO     | mean x: 1740502499.5
[2025-02-25 12:34:12] 2025-02-25 17:33:59,324 | INFO     | mean y: 2579239.6944444445
[2025-02-25 12:34:12] 2025-02-25 17:33:59,324 | INFO     | -- intersect: -411503983062.72107
[2025-02-25 12:34:12] 2025-02-25 17:33:59,324 | INFO     | intersect: -411503983062.72107
[2025-02-25 12:34:12] 2025-02-25 17:33:59,324 | INFO     | chi2: 2.8906206319055907
[2025-02-25 12:34:12] 2025-02-25 17:33:59,325 | INFO     | -- intersect: -411503983062.72107
[2025-02-25 12:34:12] 2025-02-25 17:33:59,325 | INFO     | current memory leak: 236.43 B/s (using 72 data points, chi2=2.89)
[2025-02-25 12:34:12] 2025-02-25 17:33:59,325 | INFO     | ..............................
[2025-02-25 12:34:12] 2025-02-25 17:33:59,325 | INFO     | . Timing measurements:
[2025-02-25 12:34:12] 2025-02-25 17:33:59,325 | INFO     | . get job = 0 s
[2025-02-25 12:34:12] 2025-02-25 17:33:59,325 | INFO     | . initial setup = 2 s
[2025-02-25 12:34:12] 2025-02-25 17:33:59,326 | INFO     | . payload setup = 7 s
[2025-02-25 12:34:12] 2025-02-25 17:33:59,326 | INFO     | . stage-in = 0 s
[2025-02-25 12:34:12] 2025-02-25 17:33:59,326 | INFO     | . payload execution = 4801 s
[2025-02-25 12:34:12] 2025-02-25 17:33:59,326 | INFO     | . stage-out = 0 s
[2025-02-25 12:34:12] 2025-02-25 17:33:59,326 | INFO     | . log creation = 0 s
[2025-02-25 12:34:12] 2025-02-25 17:33:59,326 | INFO     | ..............................
[2025-02-25 12:34:12] 2025-02-25 17:33:59,431 | INFO     | 
[2025-02-25 12:34:12] 2025-02-25 17:33:59,432 | INFO     | job summary report
[2025-02-25 12:34:12] 2025-02-25 17:33:59,432 | INFO     | --------------------------------------------------
[2025-02-25 12:34:12] 2025-02-25 17:33:59,432 | INFO     | PanDA job id: 6530459363
[2025-02-25 12:34:12] 2025-02-25 17:33:59,432 | INFO     | task id: 43401121
[2025-02-25 12:34:12] 2025-02-25 17:33:59,432 | INFO     | errors: (none)
[2025-02-25 12:34:12] 2025-02-25 17:33:59,432 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 12:34:12] 2025-02-25 17:33:59,433 | INFO     | pilot state: finished 
[2025-02-25 12:34:12] 2025-02-25 17:33:59,433 | INFO     | transexitcode: 0
[2025-02-25 12:34:12] 2025-02-25 17:33:59,433 | INFO     | exeerrorcode: 0
[2025-02-25 12:34:12] 2025-02-25 17:33:59,433 | INFO     | exeerrordiag: 
[2025-02-25 12:34:12] 2025-02-25 17:33:59,433 | INFO     | exitcode: 0
[2025-02-25 12:34:12] 2025-02-25 17:33:59,433 | INFO     | exitmsg: OK
[2025-02-25 12:34:12] 2025-02-25 17:33:59,434 | INFO     | cpuconsumptiontime: 46078 s
[2025-02-25 12:34:12] 2025-02-25 17:33:59,434 | INFO     | nevents: 400
[2025-02-25 12:34:12] 2025-02-25 17:33:59,434 | INFO     | neventsw: 0
[2025-02-25 12:34:12] 2025-02-25 17:33:59,434 | INFO     | pid: 29890
[2025-02-25 12:34:12] 2025-02-25 17:33:59,434 | INFO     | pgrp: 29890
[2025-02-25 12:34:12] 2025-02-25 17:33:59,434 | INFO     | corecount: 12
[2025-02-25 12:34:12] 2025-02-25 17:33:59,435 | INFO     | event service: False
[2025-02-25 12:34:12] 2025-02-25 17:33:59,435 | INFO     | sizes: {0: 2376772, 1: 2376971, 6: 2377177, 12: 2377205, 4812: 2403232, 4813: 2412173, 4815: 2412357, 4824: 2412527}
[2025-02-25 12:34:12] 2025-02-25 17:33:59,435 | INFO     | --------------------------------------------------
[2025-02-25 12:34:12] 2025-02-25 17:33:59,435 | INFO     | 
[2025-02-25 12:34:12] 2025-02-25 17:33:59,435 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-25 12:34:12] 2025-02-25 17:33:59,458 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 12:34:12] 2025-02-25 17:33:59,459 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 12:34:12] 2025-02-25 17:33:59,459 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 12:34:12] 2025-02-25 17:33:59,459 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 12:34:12] 2025-02-25 17:33:59,459 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 12:34:12] 2025-02-25 17:33:59,459 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 12:34:12] 2025-02-25 17:33:59,460 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 12:34:12] 2025-02-25 17:33:59,460 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 12:34:12] 2025-02-25 17:33:59,460 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 12:34:12] 2025-02-25 17:33:59,460 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 12:34:12] 2025-02-25 17:33:59,460 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 12:34:12] 2025-02-25 17:33:59,460 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 12:34:12] 2025-02-25 17:33:59,461 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 12:34:12] 2025-02-25 17:33:59,461 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 12:34:12] 2025-02-25 17:33:59,461 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 12:34:12] 2025-02-25 17:33:59,461 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 12:34:12] 2025-02-25 17:33:59,461 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 12:34:12] 2025-02-25 17:33:59,461 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 12:34:12] 2025-02-25 17:33:59,462 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 12:34:12] 2025-02-25 17:33:59,462 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 12:34:12] 2025-02-25 17:33:59,462 | INFO     | job 6530459363 has completed (purged errors)
[2025-02-25 12:34:12] 2025-02-25 17:33:59,462 | INFO     | overall cleanup function is called
[2025-02-25 12:34:12] 2025-02-25 17:34:00,471 | INFO     | --- collectZombieJob: --- 10, [29890]
[2025-02-25 12:34:12] 2025-02-25 17:34:00,471 | INFO     | zombie collector waiting for pid 29890
[2025-02-25 12:34:12] 2025-02-25 17:34:00,471 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 12:34:12] 2025-02-25 17:34:00,471 | INFO     | collected zombie processes
[2025-02-25 12:34:12] 2025-02-25 17:34:00,471 | INFO     | will attempt to kill all subprocesses of pid=29890
[2025-02-25 12:34:12] 2025-02-25 17:34:00,535 | INFO     | process IDs to be killed: [29890] (in reverse order)
[2025-02-25 12:34:12] 2025-02-25 17:34:00,585 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 12:34:12] 2025-02-25 17:34:00,585 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 12:34:12] 2025-02-25 17:34:00,589 | INFO     | did not find any defunct processes belonging to 29890
[2025-02-25 12:34:12] 2025-02-25 17:34:00,592 | INFO     | did not find any defunct processes belonging to 29890
[2025-02-25 12:34:12] 2025-02-25 17:34:00,592 | INFO     | ready for new job
[2025-02-25 12:34:12] 2025-02-25 17:34:00,593 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 12:34:12] 2025-02-25 17:34:00,594 | INFO     | **************************************
[2025-02-25 12:34:12] 2025-02-25 17:34:00,594 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 12:34:12] 2025-02-25 17:34:00,594 | INFO     | **************************************
[2025-02-25 12:34:12] 2025-02-25 17:34:00,594 | INFO     | 
[2025-02-25 12:34:12] 2025-02-25 17:34:00,595 | INFO     | architecture information:
[2025-02-25 12:34:12] 2025-02-25 17:34:00,596 | INFO     | executing command: cat /etc/os-release
[2025-02-25 12:34:12] 2025-02-25 17:34:00,610 | INFO     | cat /etc/os-release:
[2025-02-25 12:34:12] NAME="CentOS Linux"
[2025-02-25 12:34:12] VERSION="7 (Core)"
[2025-02-25 12:34:12] ID="centos"
[2025-02-25 12:34:12] ID_LIKE="rhel fedora"
[2025-02-25 12:34:12] VERSION_ID="7"
[2025-02-25 12:34:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 12:34:12] ANSI_COLOR="0;31"
[2025-02-25 12:34:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 12:34:12] HOME_URL="https://www.centos.org/"
[2025-02-25 12:34:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 12:34:12] 
[2025-02-25 12:34:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 12:34:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 12:34:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 12:34:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 12:34:12] 
[2025-02-25 12:34:12] 2025-02-25 17:34:00,610 | INFO     | **************************************
[2025-02-25 12:34:12] 2025-02-25 17:34:01,113 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-25 12:34:12] 2025-02-25 17:34:01,131 | INFO     | sufficient remaining disk space (29362225152 B)
[2025-02-25 12:34:12] 2025-02-25 17:34:01,131 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 12:34:12] 2025-02-25 17:34:01,131 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 12:34:12] 2025-02-25 17:34:01,131 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 12:34:12] 2025-02-25 17:34:01,132 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 12:34:12] 2025-02-25 17:34:01,132 | INFO     | aborting loop
[2025-02-25 12:34:12] 2025-02-25 17:34:01,716 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 12:34:12] 2025-02-25 17:34:01,821 | INFO     | all payload control threads have been joined
[2025-02-25 12:34:12] 2025-02-25 17:34:01,873 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 12:34:12] 2025-02-25 17:34:01,873 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 12:34:12] 2025-02-25 17:34:01,873 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 12:34:12] 2025-02-25 17:34:02,064 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 12:34:12] 2025-02-25 17:34:02,136 | INFO     | [job] retrieve thread has finished
[2025-02-25 12:34:12] 2025-02-25 17:34:02,137 | INFO     | [job] job monitor thread has finished
[2025-02-25 12:34:12] 2025-02-25 17:34:02,138 | INFO     | [job] queue monitor thread has finished
[2025-02-25 12:34:12] 2025-02-25 17:34:02,188 | INFO     | all data control threads have been joined
[2025-02-25 12:34:12] 2025-02-25 17:34:02,317 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 12:34:12] 2025-02-25 17:34:02,359 | INFO     | all job control threads have been joined
[2025-02-25 12:34:12] 2025-02-25 17:34:02,629 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 12:34:12] 2025-02-25 17:34:02,822 | INFO     | [payload] control thread has finished
[2025-02-25 12:34:12] 2025-02-25 17:34:02,959 | INFO     | [payload] failed_post thread has finished
[2025-02-25 12:34:12] 2025-02-25 17:34:02,965 | INFO     | [data] copytool_in thread has finished
[2025-02-25 12:34:12] 2025-02-25 17:34:03,193 | INFO     | [data] control thread has finished
[2025-02-25 12:34:12] 2025-02-25 17:34:03,261 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 12:34:12] 2025-02-25 17:34:03,315 | INFO     | [job] validate thread has finished
[2025-02-25 12:34:12] 2025-02-25 17:34:03,364 | INFO     | [job] control thread has finished
[2025-02-25 12:34:12] 2025-02-25 17:34:03,598 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 12:34:12] 2025-02-25 17:34:03,621 | INFO     | [payload] validate_post thread has finished
[2025-02-25 12:34:12] 2025-02-25 17:34:04,069 | INFO     | [data] copytool_out thread has finished
[2025-02-25 12:34:12] 2025-02-25 17:34:05,718 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 12:34:12] 2025-02-25 17:34:07,515 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140577234044736)>', '<ExcThread(monitor, started 140576334792448)>']
[2025-02-25 12:34:12] 2025-02-25 17:34:07,899 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 12:34:12] 2025-02-25 17:34:07,899 | INFO     | [monitor] control thread has ended
[2025-02-25 12:34:12] 2025-02-25 17:34:12,523 | INFO     | all workflow threads have been joined
[2025-02-25 12:34:12] 2025-02-25 17:34:12,523 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 12:34:12] 2025-02-25 17:34:12,523 | INFO     | traces error code: 0
[2025-02-25 12:34:12] 2025-02-25 17:34:12,524 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 12:34:12] 2025-02-25 17:34:12,606 [wrapper] ==== pilot stdout END ====
[2025-02-25 12:34:12] 2025-02-25 17:34:12,610 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 12:34:12] 2025-02-25 17:34:12,614 [wrapper] pilotpid: 23539
[2025-02-25 12:34:12] 2025-02-25 17:34:12,618 [wrapper] Pilot exit status: 0
[2025-02-25 12:34:12] 2025-02-25 17:34:12,634 [wrapper] pandaids: 6530459363
[2025-02-25 12:34:12] 2025-02-25 17:34:12,678 [wrapper] cleanup supervisor_pilot 18320 23540
[2025-02-25 12:34:12] 2025-02-25 17:34:12,682 [wrapper] Test setup, not cleaning
[2025-02-25 12:34:12] 2025-02-25 17:34:12,690 [wrapper] apfmon messages muted
[2025-02-25 12:34:12] 2025-02-25 17:34:12,694 [wrapper] ==== wrapper stdout END ====
[2025-02-25 12:34:12] 2025-02-25 17:34:12,698 [wrapper] ==== wrapper stderr END ====
[2025-02-25 12:34:12]  *** Error codes and diagnostics ***
[2025-02-25 12:34:12]     "exeErrorCode": 0,
[2025-02-25 12:34:12]     "exeErrorDiag": "",
[2025-02-25 12:34:12]     "pilotErrorCode": 0,
[2025-02-25 12:34:12]     "pilotErrorDiag": "",
[2025-02-25 12:34:12]  *** Listing of results directory ***
[2025-02-25 12:34:12] total 427624
[2025-02-25 12:34:12] -rw-r--r-- 1 boincer umatlas    491065 Feb 25 09:02 pilot3.tar.gz
[2025-02-25 12:34:12] -rw-r--r-- 1 boincer umatlas      5118 Feb 25 09:44 queuedata.json
[2025-02-25 12:34:12] -rwx------ 1 boincer umatlas     35865 Feb 25 09:44 runpilot2-wrapper.sh
[2025-02-25 12:34:12] -rw-r--r-- 1 boincer umatlas       100 Feb 25 11:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 12:34:12] -rwxr-xr-x 1 boincer umatlas      7986 Feb 25 11:13 run_atlas
[2025-02-25 12:34:12] -rw-r--r-- 1 boincer umatlas       105 Feb 25 11:13 job.xml
[2025-02-25 12:34:12] -rw-r--r-- 2 boincer umatlas 252772712 Feb 25 11:13 EVNT.43401119._000082.pool.root.1
[2025-02-25 12:34:12] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 11:13 start_atlas.sh
[2025-02-25 12:34:12] drwxrwx--x 2 boincer umatlas      4096 Feb 25 11:13 shared
[2025-02-25 12:34:12] -rw-r--r-- 2 boincer umatlas    503554 Feb 25 11:13 input.tar.gz
[2025-02-25 12:34:12] -rw-r--r-- 1 boincer umatlas         0 Feb 25 11:13 boinc_lockfile
[2025-02-25 12:34:12] -rw-r--r-- 1 boincer umatlas      2541 Feb 25 11:13 pandaJob.out
[2025-02-25 12:34:12] -rw------- 1 boincer umatlas       424 Feb 25 11:13 setup.sh.local
[2025-02-25 12:34:12] -rw------- 1 boincer umatlas    988282 Feb 25 11:13 agis_schedconf.cvmfs.json
[2025-02-25 12:34:12] -rw------- 1 boincer umatlas   1577983 Feb 25 11:13 agis_ddmendpoints.agis.ALL.json
[2025-02-25 12:34:12] drwx------ 4 boincer umatlas      4096 Feb 25 11:13 pilot3
[2025-02-25 12:34:12] -rw-r--r-- 1 boincer umatlas      5869 Feb 25 12:31 init_data.xml
[2025-02-25 12:34:12] -rw------- 1 boincer umatlas 179688262 Feb 25 12:33 HITS.43401121._002035.pool.root.1
[2025-02-25 12:34:12] -rw------- 1 boincer umatlas        95 Feb 25 12:33 pilot_heartbeat.json
[2025-02-25 12:34:12] -rw-r--r-- 1 boincer umatlas       529 Feb 25 12:33 boinc_task_state.xml
[2025-02-25 12:34:12] -rw------- 1 boincer umatlas      1047 Feb 25 12:33 memory_monitor_summary.json
[2025-02-25 12:34:12] -rw------- 1 boincer umatlas    358475 Feb 25 12:33 log.43401121._002035.job.log.tgz.1
[2025-02-25 12:34:12] -rw-r--r-- 1 boincer umatlas      8192 Feb 25 12:33 boinc_mmap_file
[2025-02-25 12:34:12] -rw-r--r-- 1 boincer umatlas        27 Feb 25 12:33 wrapper_checkpoint.txt
[2025-02-25 12:34:12] -rw------- 1 boincer umatlas      7762 Feb 25 12:33 heartbeat.json
[2025-02-25 12:34:12] -rw------- 1 boincer umatlas      4215 Feb 25 12:34 pilotlog.txt
[2025-02-25 12:34:12] -rw------- 1 boincer umatlas    454373 Feb 25 12:34 log.43401121._002035.job.log.1
[2025-02-25 12:34:12] -rw------- 1 boincer umatlas       357 Feb 25 12:34 output.list
[2025-02-25 12:34:12] -rw-r--r-- 1 boincer umatlas       620 Feb 25 12:34 runtime_log
[2025-02-25 12:34:12] -rw------- 1 boincer umatlas    829440 Feb 25 12:34 result.tar.gz
[2025-02-25 12:34:12] -rw------- 1 boincer umatlas       658 Feb 25 12:34 zlWKDmYLB76n9Rq4apOajLDm4fhM0noT9bVoFjIUDmczfKDmXYQWcm.diag
[2025-02-25 12:34:12] -rw-r--r-- 1 boincer umatlas     11015 Feb 25 12:34 runtime_log.err
[2025-02-25 12:34:12] -rw-r--r-- 1 boincer umatlas     21748 Feb 25 12:34 stderr.txt
[2025-02-25 12:34:12] HITS file was successfully produced:
[2025-02-25 12:34:12] -rw------- 1 boincer umatlas 179688262 Feb 25 12:33 shared/HITS.pool.root.1
[2025-02-25 12:34:12]  *** Contents of shared directory: ***
[2025-02-25 12:34:12] total 423660
[2025-02-25 12:34:12] -rw-r--r-- 2 boincer umatlas 252772712 Feb 25 11:13 ATLAS.root_0
[2025-02-25 12:34:12] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 11:13 start_atlas.sh
[2025-02-25 12:34:12] -rw-r--r-- 2 boincer umatlas    503554 Feb 25 11:13 input.tar.gz
[2025-02-25 12:34:12] -rw------- 1 boincer umatlas 179688262 Feb 25 12:33 HITS.pool.root.1
[2025-02-25 12:34:12] -rw------- 1 boincer umatlas    829440 Feb 25 12:34 result.tar.gz
12:34:14 (19938): run_atlas exited; CPU time 45996.321312
12:34:14 (19938): called boinc_finish(0)

</stderr_txt>
]]>

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