Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:05:04 (13161): wrapper (7.7.26015): starting
11:05:04 (13161): wrapper: running run_atlas (--nthreads 12)
[2025-02-25 11:05:04] Arguments: --nthreads 12
[2025-02-25 11:05:04] Threads: 12
[2025-02-25 11:05:04] Checking for CVMFS
[2025-02-25 11:05:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 11:05:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 11:05:04] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 11:05:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 11:05:04] 2.11.2.0 25430 297053 155444 143043 2 58 12748611 20275200 1 130560 0 23818625 99.986 7651449 39607 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-25 11:05:04] CVMFS is ok
[2025-02-25 11:05:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 11:05:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 11:05:04] Further information can be found at the LHC@home message board.
[2025-02-25 11:05:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 11:05:04] Checking for apptainer binary...
[2025-02-25 11:05:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 11:05:04] Running /usr/bin/apptainer --version
[2025-02-25 11:05:04] apptainer version 1.3.2-1.el7
[2025-02-25 11:05:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 11:05:06] c-205-25.aglt2.org
[2025-02-25 11:05:06] apptainer works
[2025-02-25 11:05:06] Set ATHENA_PROC_NUMBER=12
[2025-02-25 11:05:06] Set ATHENA_CORE_NUMBER=12
[2025-02-25 11:05:06] Starting ATLAS job with PandaID=6530459208
[2025-02-25 11:05:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 12:27:36]  *** The last 200 lines of the pilot log: ***
[2025-02-25 12:27:36]  guid=f9dcf047-5f4b-4f42-91b7-994fd160f864
[2025-02-25 12:27:36]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-02-25 12:27:36]  is_altstaged=None
[2025-02-25 12:27:36]  is_tar=False
[2025-02-25 12:27:36]  lfn=log.43401121._001902.job.log.tgz.1
[2025-02-25 12:27:36]  mtime=0
[2025-02-25 12:27:36]  protocol_id=None
[2025-02-25 12:27:36]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-25 12:27:36]  replicas=None
[2025-02-25 12:27:36]  scope=mc23_13p6TeV
[2025-02-25 12:27:36]  status=None
[2025-02-25 12:27:36]  status_code=0
[2025-02-25 12:27:36]  storage_token=
[2025-02-25 12:27:36]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6530459208/log.43401121._001902.job.log.tgz.1
[2025-02-25 12:27:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d9/e1/log.43401121._001902.job.log.tgz.1
[2025-02-25 12:27:36]  workdir=None
[2025-02-25 12:27:36] ]
[2025-02-25 12:27:36] 2025-02-25 17:27:14,761 | INFO     | transferring file log.43401121._001902.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6530459208/log.43401121._001902.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-02-25 12:27:36] 2025-02-25 17:27:14,761 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6530459208/log.43401121._001902.job.log.tgz.1 /tmp/boinchome/slots/0/log.43401121._001902.job
[2025-02-25 12:27:36] 2025-02-25 17:27:14,789 | INFO     | adding to output.list: log.43401121._001902.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d9/e1/log.43401121._001902.job.log.tg
[2025-02-25 12:27:36] 2025-02-25 17:27:14,790 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-25 12:27:36] 2025-02-25 17:27:14,791 | INFO     | summary of transferred files:
[2025-02-25 12:27:36] 2025-02-25 17:27:14,791 | INFO     |  -- lfn=log.43401121._001902.job.log.tgz.1, status_code=0, status=transferred
[2025-02-25 12:27:36] 2025-02-25 17:27:14,791 | INFO     | stage-out finished correctly
[2025-02-25 12:27:36] 2025-02-25 17:27:15,508 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-25 12:27:36] 2025-02-25 17:27:17,337 | INFO     | job 6530459208 has state=finished
[2025-02-25 12:27:36] 2025-02-25 17:27:17,337 | INFO     | preparing for final server update for job 6530459208 in state='finished'
[2025-02-25 12:27:36] 2025-02-25 17:27:17,337 | INFO     | this job has now completed (state=finished)
[2025-02-25 12:27:36] 2025-02-25 17:27:17,338 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-25 12:27:36] 2025-02-25 17:27:17,338 | INFO     | log transfer has been attempted: DONE
[2025-02-25 12:27:36] 2025-02-25 17:27:17,338 | INFO     | job 6530459208 has finished - writing final server update
[2025-02-25 12:27:36] 2025-02-25 17:27:17,338 | INFO     | total number of processed events: 400 (read)
[2025-02-25 12:27:36] 2025-02-25 17:27:17,340 | INFO     | executing command: lscpu
[2025-02-25 12:27:36] 2025-02-25 17:27:17,366 | INFO     | found 12 cores (6 cores per socket, 2 sockets)
[2025-02-25 12:27:36] 2025-02-25 17:27:17,382 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-25 12:27:36] 2025-02-25 17:27:22,216 | INFO     | PID=17167 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-02-25 12:27:36] 2025-02-25 17:27:22,586 | INFO     | CPU arch script returned: x86-64-v2
[2025-02-25 12:27:36] 2025-02-25 17:27:22,586 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6530459208/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 12:27:36] 2025-02-25 17:27:22,587 | INFO     | extracted standard info from prmon json
[2025-02-25 12:27:36] 2025-02-25 17:27:22,587 | INFO     | extracted standard memory fields from prmon json
[2025-02-25 12:27:36] 2025-02-25 17:27:22,588 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-25 12:27:36] 2025-02-25 17:27:22,588 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 12:27:36] 2025-02-25 17:27:22,588 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 12:27:36] 2025-02-25 17:27:22,591 | INFO     | fitting pss+swap vs Time
[2025-02-25 12:27:36] 2025-02-25 17:27:22,591 | INFO     | model: linear, x: [1740499853.0, 1740499914.0, 1740499975.0, 1740500036.0, 1740500097.0, 1740500158.0, 1740500219.0, 1740500280.0, 1740500341.0, 1740500402.0, 1740
[2025-02-25 12:27:36] 2025-02-25 17:27:22,594 | INFO     | sum of square deviations: 125630262.5
[2025-02-25 12:27:36] 2025-02-25 17:27:22,596 | INFO     | sum of deviations: 28041284193.5
[2025-02-25 12:27:36] 2025-02-25 17:27:22,596 | INFO     | mean x: 1740502079.5
[2025-02-25 12:27:36] 2025-02-25 17:27:22,596 | INFO     | mean y: 2569006.0135135134
[2025-02-25 12:27:36] 2025-02-25 17:27:22,596 | INFO     | -- intersect: -388485940684.37445
[2025-02-25 12:27:36] 2025-02-25 17:27:22,597 | INFO     | intersect: -388485940684.37445
[2025-02-25 12:27:36] 2025-02-25 17:27:22,597 | INFO     | chi2: 2.1806229574383167
[2025-02-25 12:27:36] 2025-02-25 17:27:22,597 | INFO     | -- intersect: -388485940684.37445
[2025-02-25 12:27:36] 2025-02-25 17:27:22,597 | INFO     | current memory leak: 223.20 B/s (using 74 data points, chi2=2.18)
[2025-02-25 12:27:36] 2025-02-25 17:27:22,599 | INFO     | ..............................
[2025-02-25 12:27:36] 2025-02-25 17:27:22,599 | INFO     | . Timing measurements:
[2025-02-25 12:27:36] 2025-02-25 17:27:22,599 | INFO     | . get job = 0 s
[2025-02-25 12:27:36] 2025-02-25 17:27:22,599 | INFO     | . initial setup = 2 s
[2025-02-25 12:27:36] 2025-02-25 17:27:22,599 | INFO     | . payload setup = 7 s
[2025-02-25 12:27:36] 2025-02-25 17:27:22,599 | INFO     | . stage-in = 0 s
[2025-02-25 12:27:36] 2025-02-25 17:27:22,600 | INFO     | . payload execution = 4887 s
[2025-02-25 12:27:36] 2025-02-25 17:27:22,600 | INFO     | . stage-out = 0 s
[2025-02-25 12:27:36] 2025-02-25 17:27:22,600 | INFO     | . log creation = 0 s
[2025-02-25 12:27:36] 2025-02-25 17:27:22,600 | INFO     | ..............................
[2025-02-25 12:27:36] 2025-02-25 17:27:22,663 | WARNING  | process 23538 can no longer be monitored (due to stat problems) - aborting
[2025-02-25 12:27:36] 2025-02-25 17:27:22,664 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6530459208/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 12:27:36] 2025-02-25 17:27:22,697 | INFO     | 
[2025-02-25 12:27:36] 2025-02-25 17:27:22,697 | INFO     | job summary report
[2025-02-25 12:27:36] 2025-02-25 17:27:22,697 | INFO     | --------------------------------------------------
[2025-02-25 12:27:36] 2025-02-25 17:27:22,697 | INFO     | PanDA job id: 6530459208
[2025-02-25 12:27:36] 2025-02-25 17:27:22,697 | INFO     | task id: 43401121
[2025-02-25 12:27:36] 2025-02-25 17:27:22,698 | INFO     | errors: (none)
[2025-02-25 12:27:36] 2025-02-25 17:27:22,698 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 12:27:36] 2025-02-25 17:27:22,698 | INFO     | pilot state: finished 
[2025-02-25 12:27:36] 2025-02-25 17:27:22,698 | INFO     | transexitcode: 0
[2025-02-25 12:27:36] 2025-02-25 17:27:22,698 | INFO     | exeerrorcode: 0
[2025-02-25 12:27:36] 2025-02-25 17:27:22,699 | INFO     | exeerrordiag: 
[2025-02-25 12:27:36] 2025-02-25 17:27:22,699 | INFO     | exitcode: 0
[2025-02-25 12:27:36] 2025-02-25 17:27:22,699 | INFO     | exitmsg: OK
[2025-02-25 12:27:36] 2025-02-25 17:27:22,699 | INFO     | cpuconsumptiontime: 45722 s
[2025-02-25 12:27:36] 2025-02-25 17:27:22,699 | INFO     | nevents: 400
[2025-02-25 12:27:36] 2025-02-25 17:27:22,699 | INFO     | neventsw: 0
[2025-02-25 12:27:36] 2025-02-25 17:27:22,700 | INFO     | pid: 23538
[2025-02-25 12:27:36] 2025-02-25 17:27:22,700 | INFO     | pgrp: 23538
[2025-02-25 12:27:36] 2025-02-25 17:27:22,700 | INFO     | corecount: 12
[2025-02-25 12:27:36] 2025-02-25 17:27:22,700 | INFO     | event service: False
[2025-02-25 12:27:36] 2025-02-25 17:27:22,700 | INFO     | sizes: {0: 2376772, 1: 2376971, 6: 2377177, 12: 2377205, 4899: 2403288, 4900: 2412229, 4901: 2412413, 4908: 2412583}
[2025-02-25 12:27:36] 2025-02-25 17:27:22,700 | INFO     | --------------------------------------------------
[2025-02-25 12:27:36] 2025-02-25 17:27:22,700 | INFO     | 
[2025-02-25 12:27:36] 2025-02-25 17:27:22,701 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-25 12:27:36] 2025-02-25 17:27:22,723 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 12:27:36] 2025-02-25 17:27:22,723 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 12:27:36] 2025-02-25 17:27:22,723 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 12:27:36] 2025-02-25 17:27:22,723 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 12:27:36] 2025-02-25 17:27:22,724 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 12:27:36] 2025-02-25 17:27:22,724 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 12:27:36] 2025-02-25 17:27:22,724 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 12:27:36] 2025-02-25 17:27:22,724 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 12:27:36] 2025-02-25 17:27:22,724 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 12:27:36] 2025-02-25 17:27:22,725 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 12:27:36] 2025-02-25 17:27:22,725 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 12:27:36] 2025-02-25 17:27:22,725 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 12:27:36] 2025-02-25 17:27:22,725 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 12:27:36] 2025-02-25 17:27:22,725 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 12:27:36] 2025-02-25 17:27:22,725 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 12:27:36] 2025-02-25 17:27:22,726 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 12:27:36] 2025-02-25 17:27:22,726 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 12:27:36] 2025-02-25 17:27:22,726 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 12:27:36] 2025-02-25 17:27:22,726 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 12:27:36] 2025-02-25 17:27:22,726 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 12:27:36] 2025-02-25 17:27:22,726 | INFO     | job 6530459208 has completed (purged errors)
[2025-02-25 12:27:36] 2025-02-25 17:27:22,727 | INFO     | overall cleanup function is called
[2025-02-25 12:27:36] 2025-02-25 17:27:22,746 | INFO     | number of running child processes to parent process 23538: 1
[2025-02-25 12:27:36] 2025-02-25 17:27:22,746 | INFO     | maximum number of monitored processes: 6
[2025-02-25 12:27:36] 2025-02-25 17:27:22,746 | INFO     | aborting job monitoring since job object (job id=6530459208) has expired
[2025-02-25 12:27:36] 2025-02-25 17:27:23,734 | INFO     | --- collectZombieJob: --- 10, [23538]
[2025-02-25 12:27:36] 2025-02-25 17:27:23,735 | INFO     | zombie collector waiting for pid 23538
[2025-02-25 12:27:36] 2025-02-25 17:27:23,735 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 12:27:36] 2025-02-25 17:27:23,735 | INFO     | collected zombie processes
[2025-02-25 12:27:36] 2025-02-25 17:27:23,735 | INFO     | will attempt to kill all subprocesses of pid=23538
[2025-02-25 12:27:36] 2025-02-25 17:27:23,799 | INFO     | process IDs to be killed: [23538] (in reverse order)
[2025-02-25 12:27:36] 2025-02-25 17:27:23,847 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 12:27:36] 2025-02-25 17:27:23,848 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 12:27:36] 2025-02-25 17:27:23,851 | INFO     | did not find any defunct processes belonging to 23538
[2025-02-25 12:27:36] 2025-02-25 17:27:23,854 | INFO     | did not find any defunct processes belonging to 23538
[2025-02-25 12:27:36] 2025-02-25 17:27:23,854 | INFO     | ready for new job
[2025-02-25 12:27:36] 2025-02-25 17:27:23,854 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 12:27:36] 2025-02-25 17:27:23,856 | INFO     | **************************************
[2025-02-25 12:27:36] 2025-02-25 17:27:23,856 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 12:27:36] 2025-02-25 17:27:23,856 | INFO     | **************************************
[2025-02-25 12:27:36] 2025-02-25 17:27:23,856 | INFO     | 
[2025-02-25 12:27:36] 2025-02-25 17:27:23,857 | INFO     | architecture information:
[2025-02-25 12:27:36] 2025-02-25 17:27:23,857 | INFO     | executing command: cat /etc/os-release
[2025-02-25 12:27:36] 2025-02-25 17:27:23,872 | INFO     | cat /etc/os-release:
[2025-02-25 12:27:36] NAME="CentOS Linux"
[2025-02-25 12:27:36] VERSION="7 (Core)"
[2025-02-25 12:27:36] ID="centos"
[2025-02-25 12:27:36] ID_LIKE="rhel fedora"
[2025-02-25 12:27:36] VERSION_ID="7"
[2025-02-25 12:27:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 12:27:36] ANSI_COLOR="0;31"
[2025-02-25 12:27:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 12:27:36] HOME_URL="https://www.centos.org/"
[2025-02-25 12:27:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 12:27:36] 
[2025-02-25 12:27:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 12:27:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 12:27:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 12:27:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 12:27:36] 
[2025-02-25 12:27:36] 2025-02-25 17:27:23,872 | INFO     | **************************************
[2025-02-25 12:27:36] 2025-02-25 17:27:24,375 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-25 12:27:36] 2025-02-25 17:27:24,391 | INFO     | sufficient remaining disk space (29368516608 B)
[2025-02-25 12:27:36] 2025-02-25 17:27:24,392 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 12:27:36] 2025-02-25 17:27:24,392 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 12:27:36] 2025-02-25 17:27:24,392 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 12:27:36] 2025-02-25 17:27:24,392 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 12:27:36] 2025-02-25 17:27:24,393 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-25 12:27:36] 2025-02-25 17:27:24,393 | INFO     | aborting loop
[2025-02-25 12:27:36] 2025-02-25 17:27:24,393 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 12:27:36] 2025-02-25 17:27:24,394 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 12:27:36] 2025-02-25 17:27:24,394 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 12:27:36] 2025-02-25 17:27:24,648 | INFO     | all data control threads have been joined
[2025-02-25 12:27:36] 2025-02-25 17:27:25,388 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 12:27:36] 2025-02-25 17:27:25,393 | INFO     | [job] retrieve thread has finished
[2025-02-25 12:27:36] 2025-02-25 17:27:25,398 | INFO     | [job] queue monitor thread has finished
[2025-02-25 12:27:36] 2025-02-25 17:27:25,399 | INFO     | [job] job monitor thread has finished
[2025-02-25 12:27:36] 2025-02-25 17:27:25,443 | INFO     | all job control threads have been joined
[2025-02-25 12:27:36] 2025-02-25 17:27:25,468 | INFO     | [payload] failed_post thread has finished
[2025-02-25 12:27:36] 2025-02-25 17:27:25,654 | INFO     | [data] control thread has finished
[2025-02-25 12:27:36] 2025-02-25 17:27:25,701 | INFO     | all payload control threads have been joined
[2025-02-25 12:27:36] 2025-02-25 17:27:25,713 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 12:27:36] 2025-02-25 17:27:25,821 | INFO     | [payload] validate_post thread has finished
[2025-02-25 12:27:36] 2025-02-25 17:27:25,839 | INFO     | [data] copytool_in thread has finished
[2025-02-25 12:27:36] 2025-02-25 17:27:26,099 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 12:27:36] 2025-02-25 17:27:26,420 | INFO     | [job] validate thread has finished
[2025-02-25 12:27:36] 2025-02-25 17:27:26,448 | INFO     | [job] control thread has finished
[2025-02-25 12:27:36] 2025-02-25 17:27:26,466 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 12:27:36] 2025-02-25 17:27:26,629 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 12:27:36] 2025-02-25 17:27:26,640 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 12:27:36] 2025-02-25 17:27:26,706 | INFO     | [payload] control thread has finished
[2025-02-25 12:27:36] 2025-02-25 17:27:27,393 | INFO     | [data] copytool_out thread has finished
[2025-02-25 12:27:36] 2025-02-25 17:27:30,105 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 12:27:36] 2025-02-25 17:27:30,977 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139928325171008)>', '<ExcThread(monitor, started 139927593404160)>']
[2025-02-25 12:27:36] 2025-02-25 17:27:31,428 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 12:27:36] 2025-02-25 17:27:31,429 | INFO     | [monitor] control thread has ended
[2025-02-25 12:27:36] 2025-02-25 17:27:36,002 | INFO     | all workflow threads have been joined
[2025-02-25 12:27:36] 2025-02-25 17:27:36,002 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 12:27:36] 2025-02-25 17:27:36,002 | INFO     | traces error code: 0
[2025-02-25 12:27:36] 2025-02-25 17:27:36,003 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 12:27:36] 2025-02-25 17:27:36,087 [wrapper] ==== pilot stdout END ====
[2025-02-25 12:27:36] 2025-02-25 17:27:36,091 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 12:27:36] 2025-02-25 17:27:36,095 [wrapper] pilotpid: 17167
[2025-02-25 12:27:36] 2025-02-25 17:27:36,099 [wrapper] Pilot exit status: 0
[2025-02-25 12:27:36] 2025-02-25 17:27:36,115 [wrapper] pandaids: 6530459208
[2025-02-25 12:27:36] 2025-02-25 17:27:36,156 [wrapper] cleanup supervisor_pilot 17222 17168
[2025-02-25 12:27:36] 2025-02-25 17:27:36,160 [wrapper] Test setup, not cleaning
[2025-02-25 12:27:36] 2025-02-25 17:27:36,168 [wrapper] apfmon messages muted
[2025-02-25 12:27:36] 2025-02-25 17:27:36,172 [wrapper] ==== wrapper stdout END ====
[2025-02-25 12:27:36] 2025-02-25 17:27:36,176 [wrapper] ==== wrapper stderr END ====
[2025-02-25 12:27:36]  *** Error codes and diagnostics ***
[2025-02-25 12:27:36]     "exeErrorCode": 0,
[2025-02-25 12:27:36]     "exeErrorDiag": "",
[2025-02-25 12:27:36]     "pilotErrorCode": 0,
[2025-02-25 12:27:36]     "pilotErrorDiag": "",
[2025-02-25 12:27:36]  *** Listing of results directory ***
[2025-02-25 12:27:36] total 427076
[2025-02-25 12:27:36] -rw-r--r-- 1 boincer umatlas    491065 Feb 25 09:02 pilot3.tar.gz
[2025-02-25 12:27:36] -rw-r--r-- 1 boincer umatlas      5118 Feb 25 09:44 queuedata.json
[2025-02-25 12:27:36] -rwx------ 1 boincer umatlas     35865 Feb 25 09:44 runpilot2-wrapper.sh
[2025-02-25 12:27:36] -rw-r--r-- 1 boincer umatlas       100 Feb 25 11:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 12:27:36] -rwxr-xr-x 1 boincer umatlas      7986 Feb 25 11:05 run_atlas
[2025-02-25 12:27:36] -rw-r--r-- 1 boincer umatlas       105 Feb 25 11:05 job.xml
[2025-02-25 12:27:36] -rw-r--r-- 2 boincer umatlas 250408986 Feb 25 11:05 EVNT.43401119._000076.pool.root.1
[2025-02-25 12:27:36] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 11:05 start_atlas.sh
[2025-02-25 12:27:36] drwxrwx--x 2 boincer umatlas      4096 Feb 25 11:05 shared
[2025-02-25 12:27:36] -rw-r--r-- 2 boincer umatlas    503551 Feb 25 11:05 input.tar.gz
[2025-02-25 12:27:36] -rw-r--r-- 1 boincer umatlas         0 Feb 25 11:05 boinc_lockfile
[2025-02-25 12:27:36] -rw-r--r-- 1 boincer umatlas      2541 Feb 25 11:05 pandaJob.out
[2025-02-25 12:27:36] -rw------- 1 boincer umatlas       424 Feb 25 11:05 setup.sh.local
[2025-02-25 12:27:36] -rw------- 1 boincer umatlas    988282 Feb 25 11:05 agis_schedconf.cvmfs.json
[2025-02-25 12:27:36] -rw------- 1 boincer umatlas   1577983 Feb 25 11:05 agis_ddmendpoints.agis.ALL.json
[2025-02-25 12:27:36] drwx------ 4 boincer umatlas      4096 Feb 25 11:05 pilot3
[2025-02-25 12:27:36] -rw-r--r-- 1 boincer umatlas      5867 Feb 25 12:19 init_data.xml
[2025-02-25 12:27:36] -rw------- 1 boincer umatlas 181432693 Feb 25 12:26 HITS.43401121._001902.pool.root.1
[2025-02-25 12:27:36] -rw------- 1 boincer umatlas      1047 Feb 25 12:27 memory_monitor_summary.json
[2025-02-25 12:27:36] -rw-r--r-- 1 boincer umatlas       529 Feb 25 12:27 boinc_task_state.xml
[2025-02-25 12:27:36] -rw------- 1 boincer umatlas    381101 Feb 25 12:27 log.43401121._001902.job.log.tgz.1
[2025-02-25 12:27:36] -rw------- 1 boincer umatlas        95 Feb 25 12:27 pilot_heartbeat.json
[2025-02-25 12:27:36] -rw------- 1 boincer umatlas      7762 Feb 25 12:27 heartbeat.json
[2025-02-25 12:27:36] -rw-r--r-- 1 boincer umatlas        27 Feb 25 12:27 wrapper_checkpoint.txt
[2025-02-25 12:27:36] -rw-r--r-- 1 boincer umatlas      8192 Feb 25 12:27 boinc_mmap_file
[2025-02-25 12:27:36] -rw------- 1 boincer umatlas      4338 Feb 25 12:27 pilotlog.txt
[2025-02-25 12:27:36] -rw------- 1 boincer umatlas    460909 Feb 25 12:27 log.43401121._001902.job.log.1
[2025-02-25 12:27:36] -rw------- 1 boincer umatlas       357 Feb 25 12:27 output.list
[2025-02-25 12:27:36] -rw-r--r-- 1 boincer umatlas       620 Feb 25 12:27 runtime_log
[2025-02-25 12:27:36] -rw------- 1 boincer umatlas    860160 Feb 25 12:27 result.tar.gz
[2025-02-25 12:27:36] -rw-r--r-- 1 boincer umatlas     11015 Feb 25 12:27 runtime_log.err
[2025-02-25 12:27:36] -rw------- 1 boincer umatlas       658 Feb 25 12:27 KqfLDmSLB76nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmDrwKDmtzAL3m.diag
[2025-02-25 12:27:36] -rw-r--r-- 1 boincer umatlas     21567 Feb 25 12:27 stderr.txt
[2025-02-25 12:27:36] HITS file was successfully produced:
[2025-02-25 12:27:36] -rw------- 1 boincer umatlas 181432693 Feb 25 12:26 shared/HITS.pool.root.1
[2025-02-25 12:27:36]  *** Contents of shared directory: ***
[2025-02-25 12:27:36] total 423080
[2025-02-25 12:27:36] -rw-r--r-- 2 boincer umatlas 250408986 Feb 25 11:05 ATLAS.root_0
[2025-02-25 12:27:36] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 11:05 start_atlas.sh
[2025-02-25 12:27:36] -rw-r--r-- 2 boincer umatlas    503551 Feb 25 11:05 input.tar.gz
[2025-02-25 12:27:36] -rw------- 1 boincer umatlas 181432693 Feb 25 12:26 HITS.pool.root.1
[2025-02-25 12:27:36] -rw------- 1 boincer umatlas    860160 Feb 25 12:27 result.tar.gz
12:27:37 (13161): run_atlas exited; CPU time 45652.786251
12:27:37 (13161): called boinc_finish(0)

</stderr_txt>
]]>

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