Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:54:25 (45755): wrapper (7.7.26015): starting
10:54:25 (45755): wrapper: running run_atlas (--nthreads 8)
[2025-02-25 10:54:25] Arguments: --nthreads 8
[2025-02-25 10:54:25] Threads: 8
[2025-02-25 10:54:25] Checking for CVMFS
[2025-02-25 10:54:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 10:54:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 10:54:26] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 10:54:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 10:54:26] 2.11.2.0 53460 139077 265588 143043 3 313 16560715 18432001 9472 130560 0 110810795 99.449 139765522 56676 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-25 10:54:26] CVMFS is ok
[2025-02-25 10:54:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 10:54:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 10:54:26] Further information can be found at the LHC@home message board.
[2025-02-25 10:54:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 10:54:26] Checking for apptainer binary...
[2025-02-25 10:54:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 10:54:26] Running /usr/bin/apptainer --version
[2025-02-25 10:54:26] apptainer version 1.3.2-1.el7
[2025-02-25 10:54:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 10:54:28] c-211-40.aglt2.org
[2025-02-25 10:54:28] apptainer works
[2025-02-25 10:54:28] Set ATHENA_PROC_NUMBER=8
[2025-02-25 10:54:28] Set ATHENA_CORE_NUMBER=8
[2025-02-25 10:54:28] Starting ATLAS job with PandaID=6530459066
[2025-02-25 10:54:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 13:21:43]  *** The last 200 lines of the pilot log: ***
[2025-02-25 13:21:43] 2025-02-25 18:21:25,363 | INFO     | model: linear, x: [1740498907.0, 1740498968.0, 1740499029.0, 1740499090.0, 1740499151.0, 1740499212.0, 1740499273.0, 1740499334.0, 1740499395.0, 1740499456.0, 1740
[2025-02-25 13:21:43] 2025-02-25 18:21:25,400 | INFO     | sum of square deviations: 832732352.9352521
[2025-02-25 13:21:43] 2025-02-25 18:21:25,400 | INFO     | sum of deviations: 86874225744.24452
[2025-02-25 13:21:43] 2025-02-25 18:21:25,401 | INFO     | mean x: 1740503116.0215828
[2025-02-25 13:21:43] 2025-02-25 18:21:25,401 | INFO     | mean y: 2351145.2517985613
[2025-02-25 13:21:43] 2025-02-25 18:21:25,401 | INFO     | -- intersect: -181574430490.3438
[2025-02-25 13:21:43] 2025-02-25 18:21:25,401 | INFO     | intersect: -181574430490.3438
[2025-02-25 13:21:43] 2025-02-25 18:21:25,401 | INFO     | chi2: 5.4374916025757765
[2025-02-25 13:21:43] 2025-02-25 18:21:25,401 | INFO     | current chi2=5.4374916025757765 (change=12.627863382983012 %)
[2025-02-25 13:21:43] 2025-02-25 18:21:25,401 | INFO     | right removable region: 138
[2025-02-25 13:21:43] 2025-02-25 18:21:25,401 | INFO     | model: linear, x: [1740499212.0, 1740499273.0, 1740499334.0, 1740499395.0, 1740499456.0, 1740499517.0, 1740499578.0, 1740499639.0, 1740499700.0, 1740499761.0, 1740
[2025-02-25 13:21:43] 2025-02-25 18:21:25,401 | INFO     | sum of square deviations: 832738697.884891
[2025-02-25 13:21:43] 2025-02-25 18:21:25,402 | INFO     | sum of deviations: 44545510239.90643
[2025-02-25 13:21:43] 2025-02-25 18:21:25,402 | INFO     | mean x: 1740503421.028777
[2025-02-25 13:21:43] 2025-02-25 18:21:25,402 | INFO     | mean y: 2400678.273381295
[2025-02-25 13:21:43] 2025-02-25 18:21:25,402 | INFO     | -- intersect: -93101970670.0925
[2025-02-25 13:21:43] 2025-02-25 18:21:25,402 | INFO     | intersect: -93101970670.0925
[2025-02-25 13:21:43] 2025-02-25 18:21:25,402 | INFO     | chi2: 3.466971583951673
[2025-02-25 13:21:43] 2025-02-25 18:21:25,402 | INFO     | current chi2=3.466971583951673 (change=44.291092838313965 %)
[2025-02-25 13:21:43] 2025-02-25 18:21:25,402 | INFO     | model: linear, x: [1740499517.0, 1740499578.0, 1740499639.0, 1740499700.0, 1740499761.0, 1740499822.0, 1740499883.0, 1740499944.0, 1740500005.0, 1740500066.0, 1740
[2025-02-25 13:21:43] 2025-02-25 18:21:25,403 | INFO     | sum of square deviations: 746066085.3805995
[2025-02-25 13:21:43] 2025-02-25 18:21:25,403 | INFO     | sum of deviations: 15807901515.194033
[2025-02-25 13:21:43] 2025-02-25 18:21:25,403 | INFO     | mean x: 1740503573.5298507
[2025-02-25 13:21:43] 2025-02-25 18:21:25,403 | INFO     | mean y: 2451258.7014925373
[2025-02-25 13:21:43] 2025-02-25 18:21:25,403 | INFO     | -- intersect: -36875929378.54093
[2025-02-25 13:21:43] 2025-02-25 18:21:25,403 | INFO     | intersect: -36875929378.54093
[2025-02-25 13:21:43] 2025-02-25 18:21:25,403 | INFO     | chi2: 1.8472887102682751
[2025-02-25 13:21:43] 2025-02-25 18:21:25,405 | INFO     | current chi2=1.8472887102682751 (change=46.71751222827372 %)
[2025-02-25 13:21:43] 2025-02-25 18:21:25,405 | INFO     | model: linear, x: [1740499822.0, 1740499883.0, 1740499944.0, 1740500005.0, 1740500066.0, 1740500127.0, 1740500188.0, 1740500249.0, 1740500310.0, 1740500371.0, 1740
[2025-02-25 13:21:43] 2025-02-25 18:21:25,405 | INFO     | sum of square deviations: 665626147.8759696
[2025-02-25 13:21:43] 2025-02-25 18:21:25,406 | INFO     | sum of deviations: -4745667833.496124
[2025-02-25 13:21:43] 2025-02-25 18:21:25,406 | INFO     | mean x: 1740503726.0310078
[2025-02-25 13:21:43] 2025-02-25 18:21:25,406 | INFO     | mean y: 2489884.1240310078
[2025-02-25 13:21:43] 2025-02-25 18:21:25,406 | INFO     | -- intersect: 12411636629.730268
[2025-02-25 13:21:43] 2025-02-25 18:21:25,406 | INFO     | intersect: 12411636629.730268
[2025-02-25 13:21:43] 2025-02-25 18:21:25,406 | INFO     | chi2: 0.819280052224014
[2025-02-25 13:21:43] 2025-02-25 18:21:25,406 | INFO     | current chi2=0.819280052224014 (change=55.6495935004641 %)
[2025-02-25 13:21:43] 2025-02-25 18:21:25,407 | INFO     | model: linear, x: [1740500127.0, 1740500188.0, 1740500249.0, 1740500310.0, 1740500371.0, 1740500432.0, 1740500493.0, 1740500554.0, 1740500615.0, 1740500676.0, 1740
[2025-02-25 13:21:43] 2025-02-25 18:21:25,407 | INFO     | sum of square deviations: 591186322.8709675
[2025-02-25 13:21:43] 2025-02-25 18:21:25,407 | INFO     | sum of deviations: -5800247880.370968
[2025-02-25 13:21:43] 2025-02-25 18:21:25,407 | INFO     | mean x: 1740503878.532258
[2025-02-25 13:21:43] 2025-02-25 18:21:25,407 | INFO     | mean y: 2491973.2177419355
[2025-02-25 13:21:43] 2025-02-25 18:21:25,407 | INFO     | -- intersect: 17078925479.338608
[2025-02-25 13:21:43] 2025-02-25 18:21:25,407 | INFO     | intersect: 17078925479.338608
[2025-02-25 13:21:43] 2025-02-25 18:21:25,408 | INFO     | chi2: 0.8049007694998701
[2025-02-25 13:21:43] 2025-02-25 18:21:25,408 | INFO     | current chi2=0.8049007694998701 (change=1.7551120261148758 %)
[2025-02-25 13:21:43] 2025-02-25 18:21:25,408 | INFO     | left removable region: 40
[2025-02-25 13:21:43] 2025-02-25 18:21:25,408 | INFO     | model: linear, x: [1740501347.0, 1740501408.0, 1740501469.0, 1740501530.0, 1740501591.0, 1740501652.0, 1740501713.0, 1740501774.0, 1740501835.0, 1740501896.0, 1740
[2025-02-25 13:21:43] 2025-02-25 18:21:25,408 | INFO     | sum of square deviations: 291820190.4081629
[2025-02-25 13:21:43] 2025-02-25 18:21:25,408 | INFO     | sum of deviations: 465977281.4693877
[2025-02-25 13:21:43] 2025-02-25 18:21:25,408 | INFO     | mean x: 1740504305.5306122
[2025-02-25 13:21:43] 2025-02-25 18:21:25,409 | INFO     | mean y: 2514428.5102040814
[2025-02-25 13:21:43] 2025-02-25 18:21:25,409 | INFO     | -- intersect: -2776715697.899283
[2025-02-25 13:21:43] 2025-02-25 18:21:25,409 | INFO     | intersect: -2776715697.899283
[2025-02-25 13:21:43] 2025-02-25 18:21:25,409 | INFO     | chi2: 6.359827365872019e-05
[2025-02-25 13:21:43] 2025-02-25 18:21:25,409 | INFO     | -- intersect: -2776715697.899283
[2025-02-25 13:21:43] 2025-02-25 18:21:25,409 | INFO     | current memory leak: 1.60 B/s (using 98 data points, chi2=0.00)
[2025-02-25 13:21:43] 2025-02-25 18:21:25,414 | INFO     | ..............................
[2025-02-25 13:21:43] 2025-02-25 18:21:25,414 | INFO     | . Timing measurements:
[2025-02-25 13:21:43] 2025-02-25 18:21:25,414 | INFO     | . get job = 0 s
[2025-02-25 13:21:43] 2025-02-25 18:21:25,414 | INFO     | . initial setup = 2 s
[2025-02-25 13:21:43] 2025-02-25 18:21:25,414 | INFO     | . payload setup = 6 s
[2025-02-25 13:21:43] 2025-02-25 18:21:25,414 | INFO     | . stage-in = 0 s
[2025-02-25 13:21:43] 2025-02-25 18:21:25,414 | INFO     | . payload execution = 8733 s
[2025-02-25 13:21:43] 2025-02-25 18:21:25,414 | INFO     | . stage-out = 1 s
[2025-02-25 13:21:43] 2025-02-25 18:21:25,414 | INFO     | . log creation = 0 s
[2025-02-25 13:21:43] 2025-02-25 18:21:25,414 | INFO     | ..............................
[2025-02-25 13:21:43] 2025-02-25 18:21:26,400 | INFO     | 
[2025-02-25 13:21:43] 2025-02-25 18:21:26,400 | INFO     | job summary report
[2025-02-25 13:21:43] 2025-02-25 18:21:26,400 | INFO     | --------------------------------------------------
[2025-02-25 13:21:43] 2025-02-25 18:21:26,400 | INFO     | PanDA job id: 6530459066
[2025-02-25 13:21:43] 2025-02-25 18:21:26,400 | INFO     | task id: 43401121
[2025-02-25 13:21:43] 2025-02-25 18:21:26,400 | INFO     | errors: (none)
[2025-02-25 13:21:43] 2025-02-25 18:21:26,400 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 13:21:43] 2025-02-25 18:21:26,400 | INFO     | pilot state: finished 
[2025-02-25 13:21:43] 2025-02-25 18:21:26,400 | INFO     | transexitcode: 0
[2025-02-25 13:21:43] 2025-02-25 18:21:26,400 | INFO     | exeerrorcode: 0
[2025-02-25 13:21:43] 2025-02-25 18:21:26,400 | INFO     | exeerrordiag: 
[2025-02-25 13:21:43] 2025-02-25 18:21:26,401 | INFO     | exitcode: 0
[2025-02-25 13:21:43] 2025-02-25 18:21:26,401 | INFO     | exitmsg: OK
[2025-02-25 13:21:43] 2025-02-25 18:21:26,401 | INFO     | cpuconsumptiontime: 33073 s
[2025-02-25 13:21:43] 2025-02-25 18:21:26,401 | INFO     | nevents: 400
[2025-02-25 13:21:43] 2025-02-25 18:21:26,401 | INFO     | neventsw: 0
[2025-02-25 13:21:43] 2025-02-25 18:21:26,401 | INFO     | pid: 57264
[2025-02-25 13:21:43] 2025-02-25 18:21:26,401 | INFO     | pgrp: 57264
[2025-02-25 13:21:43] 2025-02-25 18:21:26,401 | INFO     | corecount: 8
[2025-02-25 13:21:43] 2025-02-25 18:21:26,401 | INFO     | event service: False
[2025-02-25 13:21:43] 2025-02-25 18:21:26,401 | INFO     | sizes: {0: 2376943, 4: 2377149, 11: 2377177, 8744: 2405409, 8746: 2414350, 8747: 2414406, 8792: 2414704}
[2025-02-25 13:21:43] 2025-02-25 18:21:26,401 | INFO     | --------------------------------------------------
[2025-02-25 13:21:43] 2025-02-25 18:21:26,401 | INFO     | 
[2025-02-25 13:21:43] 2025-02-25 18:21:26,401 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-02-25 13:21:43] 2025-02-25 18:21:26,456 | INFO     | PID=49835 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-02-25 13:21:43] 2025-02-25 18:21:26,469 | INFO     | .. there are 12 such processes running
[2025-02-25 13:21:43] 2025-02-25 18:21:26,625 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 13:21:43] 2025-02-25 18:21:26,625 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 13:21:43] 2025-02-25 18:21:26,625 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 13:21:43] 2025-02-25 18:21:26,625 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 13:21:43] 2025-02-25 18:21:26,625 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 13:21:43] 2025-02-25 18:21:26,625 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 13:21:43] 2025-02-25 18:21:26,625 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 13:21:43] 2025-02-25 18:21:26,626 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 13:21:43] 2025-02-25 18:21:26,626 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 13:21:43] 2025-02-25 18:21:26,626 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 13:21:43] 2025-02-25 18:21:26,626 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 13:21:43] 2025-02-25 18:21:26,626 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 13:21:43] 2025-02-25 18:21:26,626 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 13:21:43] 2025-02-25 18:21:26,626 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 13:21:43] 2025-02-25 18:21:26,626 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 13:21:43] 2025-02-25 18:21:26,626 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 13:21:43] 2025-02-25 18:21:26,626 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 13:21:43] 2025-02-25 18:21:26,626 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 13:21:43] 2025-02-25 18:21:26,626 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 13:21:43] 2025-02-25 18:21:26,626 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 13:21:43] 2025-02-25 18:21:26,626 | INFO     | job 6530459066 has completed (purged errors)
[2025-02-25 13:21:43] 2025-02-25 18:21:26,626 | INFO     | overall cleanup function is called
[2025-02-25 13:21:43] 2025-02-25 18:21:27,654 | INFO     | --- collectZombieJob: --- 10, [57264]
[2025-02-25 13:21:43] 2025-02-25 18:21:27,654 | INFO     | zombie collector waiting for pid 57264
[2025-02-25 13:21:43] 2025-02-25 18:21:27,654 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 13:21:43] 2025-02-25 18:21:27,654 | INFO     | collected zombie processes
[2025-02-25 13:21:43] 2025-02-25 18:21:27,654 | INFO     | will attempt to kill all subprocesses of pid=57264
[2025-02-25 13:21:43] 2025-02-25 18:21:28,084 | INFO     | process IDs to be killed: [57264] (in reverse order)
[2025-02-25 13:21:43] 2025-02-25 18:21:28,231 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 13:21:43] 2025-02-25 18:21:28,231 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 13:21:43] 2025-02-25 18:21:28,238 | INFO     | did not find any defunct processes belonging to 57264
[2025-02-25 13:21:43] 2025-02-25 18:21:28,244 | INFO     | did not find any defunct processes belonging to 57264
[2025-02-25 13:21:43] 2025-02-25 18:21:28,244 | INFO     | ready for new job
[2025-02-25 13:21:43] 2025-02-25 18:21:28,244 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 13:21:43] 2025-02-25 18:21:28,246 | INFO     | **************************************
[2025-02-25 13:21:43] 2025-02-25 18:21:28,246 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 13:21:43] 2025-02-25 18:21:28,246 | INFO     | **************************************
[2025-02-25 13:21:43] 2025-02-25 18:21:28,246 | INFO     | 
[2025-02-25 13:21:43] 2025-02-25 18:21:28,249 | INFO     | architecture information:
[2025-02-25 13:21:43] 2025-02-25 18:21:28,249 | INFO     | executing command: cat /etc/os-release
[2025-02-25 13:21:43] 2025-02-25 18:21:28,266 | INFO     | cat /etc/os-release:
[2025-02-25 13:21:43] NAME="CentOS Linux"
[2025-02-25 13:21:43] VERSION="7 (Core)"
[2025-02-25 13:21:43] ID="centos"
[2025-02-25 13:21:43] ID_LIKE="rhel fedora"
[2025-02-25 13:21:43] VERSION_ID="7"
[2025-02-25 13:21:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 13:21:43] ANSI_COLOR="0;31"
[2025-02-25 13:21:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 13:21:43] HOME_URL="https://www.centos.org/"
[2025-02-25 13:21:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 13:21:43] 
[2025-02-25 13:21:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 13:21:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 13:21:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 13:21:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 13:21:43] 
[2025-02-25 13:21:43] 2025-02-25 18:21:28,266 | INFO     | **************************************
[2025-02-25 13:21:43] 2025-02-25 18:21:28,770 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-02-25 13:21:43] 2025-02-25 18:21:28,893 | INFO     | sufficient remaining disk space (75134664704 B)
[2025-02-25 13:21:43] 2025-02-25 18:21:28,894 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 13:21:43] 2025-02-25 18:21:28,894 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 13:21:43] 2025-02-25 18:21:28,894 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-25 13:21:43] 2025-02-25 18:21:28,894 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 13:21:43] 2025-02-25 18:21:28,894 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 13:21:43] 2025-02-25 18:21:28,894 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 13:21:43] 2025-02-25 18:21:28,895 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 13:21:43] 2025-02-25 18:21:28,895 | INFO     | aborting loop
[2025-02-25 13:21:43] 2025-02-25 18:21:28,895 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 13:21:43] 2025-02-25 18:21:29,097 | INFO     | all data control threads have been joined
[2025-02-25 13:21:43] 2025-02-25 18:21:29,900 | INFO     | [job] retrieve thread has finished
[2025-02-25 13:21:43] 2025-02-25 18:21:29,905 | INFO     | [job] job monitor thread has finished
[2025-02-25 13:21:43] 2025-02-25 18:21:29,996 | INFO     | all job control threads have been joined
[2025-02-25 13:21:43] 2025-02-25 18:21:30,119 | INFO     | [data] control thread has finished
[2025-02-25 13:21:43] 2025-02-25 18:21:30,181 | INFO     | all payload control threads have been joined
[2025-02-25 13:21:43] 2025-02-25 18:21:30,420 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 13:21:43] 2025-02-25 18:21:30,572 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 13:21:43] 2025-02-25 18:21:30,574 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 13:21:43] 2025-02-25 18:21:30,702 | INFO     | [payload] failed_post thread has finished
[2025-02-25 13:21:43] 2025-02-25 18:21:30,742 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 13:21:43] 2025-02-25 18:21:30,850 | INFO     | [job] validate thread has finished
[2025-02-25 13:21:43] 2025-02-25 18:21:30,883 | INFO     | [data] copytool_in thread has finished
[2025-02-25 13:21:43] 2025-02-25 18:21:30,885 | INFO     | [payload] validate_post thread has finished
[2025-02-25 13:21:43] 2025-02-25 18:21:30,902 | INFO     | [data] copytool_out thread has finished
[2025-02-25 13:21:43] 2025-02-25 18:21:31,002 | INFO     | [job] control thread has finished
[2025-02-25 13:21:43] 2025-02-25 18:21:31,103 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 13:21:43] 2025-02-25 18:21:31,187 | INFO     | [payload] control thread has finished
[2025-02-25 13:21:43] 2025-02-25 18:21:31,795 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 13:21:43] 2025-02-25 18:21:32,112 | INFO     | [job] queue monitor thread has finished
[2025-02-25 13:21:43] 2025-02-25 18:21:35,806 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 13:21:43] 2025-02-25 18:21:36,896 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140596709947200)>', '<ExcThread(monitor, started 140596106729216)>']
[2025-02-25 13:21:43] 2025-02-25 18:21:36,947 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 13:21:43] 2025-02-25 18:21:36,947 | INFO     | [monitor] control thread has ended
[2025-02-25 13:21:43] 2025-02-25 18:21:41,922 | INFO     | all workflow threads have been joined
[2025-02-25 13:21:43] 2025-02-25 18:21:41,926 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 13:21:43] 2025-02-25 18:21:41,926 | INFO     | traces error code: 0
[2025-02-25 13:21:43] 2025-02-25 18:21:41,926 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 13:21:43] 2025-02-25 18:21:42,500 [wrapper] ==== pilot stdout END ====
[2025-02-25 13:21:43] 2025-02-25 18:21:42,534 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 13:21:43] 2025-02-25 18:21:42,563 [wrapper] pilotpid: 49835
[2025-02-25 13:21:43] 2025-02-25 18:21:42,604 [wrapper] Pilot exit status: 0
[2025-02-25 13:21:43] 2025-02-25 18:21:42,781 [wrapper] pandaids: 6530459066
[2025-02-25 13:21:43] 2025-02-25 18:21:43,013 [wrapper] cleanup supervisor_pilot 26230 49836
[2025-02-25 13:21:43] 2025-02-25 18:21:43,018 [wrapper] Test setup, not cleaning
[2025-02-25 13:21:43] 2025-02-25 18:21:43,067 [wrapper] apfmon messages muted
[2025-02-25 13:21:43] 2025-02-25 18:21:43,119 [wrapper] ==== wrapper stdout END ====
[2025-02-25 13:21:43] 2025-02-25 18:21:43,152 [wrapper] ==== wrapper stderr END ====
[2025-02-25 13:21:43]  *** Error codes and diagnostics ***
[2025-02-25 13:21:43]     "exeErrorCode": 0,
[2025-02-25 13:21:43]     "exeErrorDiag": "",
[2025-02-25 13:21:43]     "pilotErrorCode": 0,
[2025-02-25 13:21:43]     "pilotErrorDiag": "",
[2025-02-25 13:21:43]  *** Listing of results directory ***
[2025-02-25 13:21:43] total 429880
[2025-02-25 13:21:43] -rw-r--r-- 1 boincer umatlas    491065 Feb 25 09:02 pilot3.tar.gz
[2025-02-25 13:21:43] -rwx------ 1 boincer umatlas     35865 Feb 25 09:44 runpilot2-wrapper.sh
[2025-02-25 13:21:43] -rw-r--r-- 1 boincer umatlas      5118 Feb 25 09:44 queuedata.json
[2025-02-25 13:21:43] -rw-r--r-- 1 boincer umatlas       100 Feb 25 10:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 13:21:43] -rwxr-xr-x 1 boincer umatlas      7986 Feb 25 10:54 run_atlas
[2025-02-25 13:21:43] -rw-r--r-- 1 boincer umatlas       105 Feb 25 10:54 job.xml
[2025-02-25 13:21:43] -rw-r--r-- 2 boincer umatlas 252253504 Feb 25 10:54 EVNT.43401119._000071.pool.root.1
[2025-02-25 13:21:43] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 10:54 start_atlas.sh
[2025-02-25 13:21:43] drwxrwx--x 2 boincer umatlas      4096 Feb 25 10:54 shared
[2025-02-25 13:21:43] -rw-r--r-- 2 boincer umatlas    503548 Feb 25 10:54 input.tar.gz
[2025-02-25 13:21:43] -rw-r--r-- 1 boincer umatlas         0 Feb 25 10:54 boinc_lockfile
[2025-02-25 13:21:43] -rw-r--r-- 1 boincer umatlas      2541 Feb 25 10:54 pandaJob.out
[2025-02-25 13:21:43] -rw------- 1 boincer umatlas       467 Feb 25 10:54 setup.sh.local
[2025-02-25 13:21:43] -rw------- 1 boincer umatlas    988282 Feb 25 10:54 agis_schedconf.cvmfs.json
[2025-02-25 13:21:43] -rw------- 1 boincer umatlas   1577983 Feb 25 10:54 agis_ddmendpoints.agis.ALL.json
[2025-02-25 13:21:43] drwx------ 4 boincer umatlas      4096 Feb 25 10:54 pilot3
[2025-02-25 13:21:43] -rw-r--r-- 1 boincer umatlas      6337 Feb 25 13:09 init_data.xml
[2025-02-25 13:21:43] -rw------- 1 boincer umatlas 181747647 Feb 25 13:19 HITS.43401121._001760.pool.root.1
[2025-02-25 13:21:43] -rw-r--r-- 1 boincer umatlas       529 Feb 25 13:19 boinc_task_state.xml
[2025-02-25 13:21:43] -rw------- 1 boincer umatlas      1084 Feb 25 13:20 memory_monitor_summary.json
[2025-02-25 13:21:43] -rw------- 1 boincer umatlas    343299 Feb 25 13:20 log.43401121._001760.job.log.tgz.1
[2025-02-25 13:21:43] -rw------- 1 boincer umatlas        95 Feb 25 13:21 pilot_heartbeat.json
[2025-02-25 13:21:43] -rw------- 1 boincer umatlas      7749 Feb 25 13:21 heartbeat.json
[2025-02-25 13:21:43] -rw------- 1 boincer umatlas      4338 Feb 25 13:21 pilotlog.txt
[2025-02-25 13:21:43] -rw-r--r-- 1 boincer umatlas      8192 Feb 25 13:21 boinc_mmap_file
[2025-02-25 13:21:43] -rw-r--r-- 1 boincer umatlas        27 Feb 25 13:21 wrapper_checkpoint.txt
[2025-02-25 13:21:43] -rw------- 1 boincer umatlas    854517 Feb 25 13:21 log.43401121._001760.job.log.1
[2025-02-25 13:21:43] -rw------- 1 boincer umatlas       357 Feb 25 13:21 output.list
[2025-02-25 13:21:43] -rw-r--r-- 1 boincer umatlas       620 Feb 25 13:21 runtime_log
[2025-02-25 13:21:43] -rw------- 1 boincer umatlas   1218560 Feb 25 13:21 result.tar.gz
[2025-02-25 13:21:43] -rw-r--r-- 1 boincer umatlas     11418 Feb 25 13:21 runtime_log.err
[2025-02-25 13:21:43] -rw------- 1 boincer umatlas       660 Feb 25 13:21 cGJMDmLLB76n9Rq4apOajLDm4fhM0noT9bVoFjIUDm9vfKDmKhuMJn.diag
[2025-02-25 13:21:43] -rw-r--r-- 1 boincer umatlas     21743 Feb 25 13:21 stderr.txt
[2025-02-25 13:21:43] HITS file was successfully produced:
[2025-02-25 13:21:43] -rw------- 1 boincer umatlas 181747647 Feb 25 13:19 shared/HITS.pool.root.1
[2025-02-25 13:21:43]  *** Contents of shared directory: ***
[2025-02-25 13:21:43] total 425540
[2025-02-25 13:21:43] -rw-r--r-- 2 boincer umatlas 252253504 Feb 25 10:54 ATLAS.root_0
[2025-02-25 13:21:43] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 10:54 start_atlas.sh
[2025-02-25 13:21:43] -rw-r--r-- 2 boincer umatlas    503548 Feb 25 10:54 input.tar.gz
[2025-02-25 13:21:43] -rw------- 1 boincer umatlas 181747647 Feb 25 13:19 HITS.pool.root.1
[2025-02-25 13:21:43] -rw------- 1 boincer umatlas   1218560 Feb 25 13:21 result.tar.gz
13:21:46 (45755): run_atlas exited; CPU time 32377.797963
13:21:46 (45755): called boinc_finish(0)

</stderr_txt>
]]>

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