Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:50:19 (1975105): wrapper (7.7.26015): starting
10:50:19 (1975105): wrapper: running run_atlas (--nthreads 9)
[2025-02-25 10:50:19] Arguments: --nthreads 9
[2025-02-25 10:50:19] Threads: 9
[2025-02-25 10:50:19] Checking for CVMFS
[2025-02-25 10:50:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 10:50:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 10:50:19] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 10:50:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 10:50:19] 2.11.5.0 1544937 78001 294732 143043 3 404 19964999 37641217 15834 130560 0 1698525 98.467 6526618 34260 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-02-25 10:50:19] CVMFS is ok
[2025-02-25 10:50:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 10:50:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 10:50:19] Further information can be found at the LHC@home message board.
[2025-02-25 10:50:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 10:50:19] Checking for apptainer binary...
[2025-02-25 10:50:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 10:50:19] Running /usr/bin/apptainer --version
[2025-02-25 10:50:19] apptainer version 1.3.6-1.el9
[2025-02-25 10:50:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 10:50:19] c6-5-7-2.aglt2.org
[2025-02-25 10:50:19] apptainer works
[2025-02-25 10:50:19] Set ATHENA_PROC_NUMBER=9
[2025-02-25 10:50:19] Set ATHENA_CORE_NUMBER=9
[2025-02-25 10:50:19] Starting ATLAS job with PandaID=6530445341
[2025-02-25 10:50:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 12:17:04]  *** The last 200 lines of the pilot log: ***
[2025-02-25 12:17:04]  status_code=0
[2025-02-25 12:17:04]  storage_token=
[2025-02-25 12:17:04]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6530445341/log.43401171._001030.job.log.tgz.1
[2025-02-25 12:17:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/80/9f/log.43401171._001030.job.log.tgz.1
[2025-02-25 12:17:04]  workdir=None
[2025-02-25 12:17:04] ]
[2025-02-25 12:17:04] 2025-02-25 17:16:40,215 | INFO     | transferring file log.43401171._001030.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6530445341/log.43401171._001030.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-02-25 12:17:04] 2025-02-25 17:16:40,216 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6530445341/log.43401171._001030.job.log.tgz.1 /tmp/boinchome/slots/0/log.43401171._001030.job
[2025-02-25 12:17:04] 2025-02-25 17:16:40,231 | INFO     | adding to output.list: log.43401171._001030.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/80/9f/log.43401171._001030.job.log.tg
[2025-02-25 12:17:04] 2025-02-25 17:16:40,232 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-25 12:17:04] 2025-02-25 17:16:40,232 | INFO     | summary of transferred files:
[2025-02-25 12:17:04] 2025-02-25 17:16:40,232 | INFO     |  -- lfn=log.43401171._001030.job.log.tgz.1, status_code=0, status=transferred
[2025-02-25 12:17:04] 2025-02-25 17:16:40,232 | INFO     | stage-out finished correctly
[2025-02-25 12:17:04] 2025-02-25 17:16:40,325 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-25 12:17:04] 2025-02-25 17:16:41,691 | INFO     | job 6530445341 has state=finished
[2025-02-25 12:17:04] 2025-02-25 17:16:41,691 | INFO     | preparing for final server update for job 6530445341 in state='finished'
[2025-02-25 12:17:04] 2025-02-25 17:16:41,692 | INFO     | this job has now completed (state=finished)
[2025-02-25 12:17:04] 2025-02-25 17:16:41,692 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-25 12:17:04] 2025-02-25 17:16:41,692 | INFO     | log transfer has been attempted: DONE
[2025-02-25 12:17:04] 2025-02-25 17:16:41,692 | INFO     | job 6530445341 has finished - writing final server update
[2025-02-25 12:17:04] 2025-02-25 17:16:41,692 | INFO     | total number of processed events: 400 (read)
[2025-02-25 12:17:04] 2025-02-25 17:16:41,709 | INFO     | executing command: lscpu
[2025-02-25 12:17:04] 2025-02-25 17:16:41,763 | INFO     | found 28 cores (14 cores per socket, 2 sockets)
[2025-02-25 12:17:04] 2025-02-25 17:16:41,779 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-25 12:17:04] 2025-02-25 17:16:44,713 | INFO     | CPU arch script returned: x86-64-v4
[2025-02-25 12:17:04] 2025-02-25 17:16:44,713 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6530445341/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 12:17:04] 2025-02-25 17:16:44,719 | INFO     | extracted standard info from prmon json
[2025-02-25 12:17:04] 2025-02-25 17:16:44,720 | INFO     | extracted standard memory fields from prmon json
[2025-02-25 12:17:04] 2025-02-25 17:16:44,720 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-25 12:17:04] 2025-02-25 17:16:44,720 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 12:17:04] 2025-02-25 17:16:44,721 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 12:17:04] 2025-02-25 17:16:44,723 | INFO     | fitting pss+swap vs Time
[2025-02-25 12:17:04] 2025-02-25 17:16:44,723 | INFO     | model: linear, x: [1740498954.0, 1740499015.0, 1740499076.0, 1740499137.0, 1740499198.0, 1740499259.0, 1740499320.0, 1740499381.0, 1740499442.0, 1740499503.0, 1740
[2025-02-25 12:17:04] 2025-02-25 17:16:44,723 | INFO     | sum of square deviations: 147126479.5
[2025-02-25 12:17:04] 2025-02-25 17:16:44,723 | INFO     | sum of deviations: 21764812199.999996
[2025-02-25 12:17:04] 2025-02-25 17:16:44,723 | INFO     | mean x: 1740501302.5
[2025-02-25 12:17:04] 2025-02-25 17:16:44,724 | INFO     | mean y: 2134207.9743589745
[2025-02-25 12:17:04] 2025-02-25 17:16:44,724 | INFO     | -- intersect: -257474861853.55298
[2025-02-25 12:17:04] 2025-02-25 17:16:44,724 | INFO     | intersect: -257474861853.55298
[2025-02-25 12:17:04] 2025-02-25 17:16:44,724 | INFO     | chi2: 1.7035863663149367
[2025-02-25 12:17:04] 2025-02-25 17:16:44,724 | INFO     | -- intersect: -257474861853.55298
[2025-02-25 12:17:04] 2025-02-25 17:16:44,724 | INFO     | current memory leak: 147.93 B/s (using 78 data points, chi2=1.70)
[2025-02-25 12:17:04] 2025-02-25 17:16:44,725 | INFO     | ..............................
[2025-02-25 12:17:04] 2025-02-25 17:16:44,725 | INFO     | . Timing measurements:
[2025-02-25 12:17:04] 2025-02-25 17:16:44,725 | INFO     | . get job = 0 s
[2025-02-25 12:17:04] 2025-02-25 17:16:44,725 | INFO     | . initial setup = 2 s
[2025-02-25 12:17:04] 2025-02-25 17:16:44,725 | INFO     | . payload setup = 4 s
[2025-02-25 12:17:04] 2025-02-25 17:16:44,725 | INFO     | . stage-in = 0 s
[2025-02-25 12:17:04] 2025-02-25 17:16:44,725 | INFO     | . payload execution = 5150 s
[2025-02-25 12:17:04] 2025-02-25 17:16:44,725 | INFO     | . stage-out = 0 s
[2025-02-25 12:17:04] 2025-02-25 17:16:44,725 | INFO     | . log creation = 0 s
[2025-02-25 12:17:04] 2025-02-25 17:16:44,725 | INFO     | ..............................
[2025-02-25 12:17:04] 2025-02-25 17:16:44,818 | WARNING  | process 1997545 can no longer be monitored (due to stat problems) - aborting
[2025-02-25 12:17:04] 2025-02-25 17:16:44,818 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6530445341/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 12:17:04] 2025-02-25 17:16:44,819 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6530445341/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 12:17:04] 2025-02-25 17:16:44,820 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3124695 B
[2025-02-25 12:17:04] 2025-02-25 17:16:44,820 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16257 B
[2025-02-25 12:17:04] 2025-02-25 17:16:44,821 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-25 12:17:04] 2025-02-25 17:16:44,833 | INFO     | sufficient remaining disk space (75094818816 B)
[2025-02-25 12:17:04] 2025-02-25 17:16:44,833 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-02-25 12:17:04] 2025-02-25 17:16:44,833 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6530445341: 3427364 B (within 2537553920 B limit)
[2025-02-25 12:17:04] 2025-02-25 17:16:44,833 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6530445341/HITS.43401171._001030.pool.root.1 does not exist (skip from workdir size calculation)
[2025-02-25 12:17:04] 2025-02-25 17:16:44,833 | INFO     | total size of present files: 0 B (workdir size: 3427364 B)
[2025-02-25 12:17:04] 2025-02-25 17:16:44,834 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6530445341/HITS.43401171._001030.pool.root.1 since it does not exist
[2025-02-25 12:17:04] 2025-02-25 17:16:44,970 | INFO     | number of running child processes to parent process 1997545: 1
[2025-02-25 12:17:04] 2025-02-25 17:16:44,971 | INFO     | maximum number of monitored processes: 6
[2025-02-25 12:17:04] 2025-02-25 17:16:44,971 | INFO     | aborting job monitoring since job object (job id=6530445341) has expired
[2025-02-25 12:17:04] 2025-02-25 17:16:45,269 | INFO     | 
[2025-02-25 12:17:04] 2025-02-25 17:16:45,270 | INFO     | job summary report
[2025-02-25 12:17:04] 2025-02-25 17:16:45,270 | INFO     | --------------------------------------------------
[2025-02-25 12:17:04] 2025-02-25 17:16:45,270 | INFO     | PanDA job id: 6530445341
[2025-02-25 12:17:04] 2025-02-25 17:16:45,270 | INFO     | task id: 43401171
[2025-02-25 12:17:04] 2025-02-25 17:16:45,270 | INFO     | errors: (none)
[2025-02-25 12:17:04] 2025-02-25 17:16:45,270 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 12:17:04] 2025-02-25 17:16:45,271 | INFO     | pilot state: finished 
[2025-02-25 12:17:04] 2025-02-25 17:16:45,271 | INFO     | transexitcode: 0
[2025-02-25 12:17:04] 2025-02-25 17:16:45,271 | INFO     | exeerrorcode: 0
[2025-02-25 12:17:04] 2025-02-25 17:16:45,271 | INFO     | exeerrordiag: 
[2025-02-25 12:17:04] 2025-02-25 17:16:45,271 | INFO     | exitcode: 0
[2025-02-25 12:17:04] 2025-02-25 17:16:45,271 | INFO     | exitmsg: OK
[2025-02-25 12:17:04] 2025-02-25 17:16:45,271 | INFO     | cpuconsumptiontime: 35919 s
[2025-02-25 12:17:04] 2025-02-25 17:16:45,271 | INFO     | nevents: 400
[2025-02-25 12:17:04] 2025-02-25 17:16:45,271 | INFO     | neventsw: 0
[2025-02-25 12:17:04] 2025-02-25 17:16:45,271 | INFO     | pid: 1997545
[2025-02-25 12:17:04] 2025-02-25 17:16:45,271 | INFO     | pgrp: 1997545
[2025-02-25 12:17:04] 2025-02-25 17:16:45,271 | INFO     | corecount: 9
[2025-02-25 12:17:04] 2025-02-25 17:16:45,271 | INFO     | event service: False
[2025-02-25 12:17:04] 2025-02-25 17:16:45,271 | INFO     | sizes: {0: 2376723, 1: 2376978, 4: 2377184, 11: 2377212, 5158: 2403548, 5159: 2412673, 5164: 2412787}
[2025-02-25 12:17:04] 2025-02-25 17:16:45,272 | INFO     | --------------------------------------------------
[2025-02-25 12:17:04] 2025-02-25 17:16:45,272 | INFO     | 
[2025-02-25 12:17:04] 2025-02-25 17:16:45,272 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-25 12:17:04] 2025-02-25 17:16:45,289 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 12:17:04] 2025-02-25 17:16:45,289 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 12:17:04] 2025-02-25 17:16:45,289 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 12:17:04] 2025-02-25 17:16:45,289 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 12:17:04] 2025-02-25 17:16:45,289 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 12:17:04] 2025-02-25 17:16:45,289 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 12:17:04] 2025-02-25 17:16:45,290 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 12:17:04] 2025-02-25 17:16:45,290 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 12:17:04] 2025-02-25 17:16:45,290 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 12:17:04] 2025-02-25 17:16:45,290 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 12:17:04] 2025-02-25 17:16:45,290 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 12:17:04] 2025-02-25 17:16:45,290 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 12:17:04] 2025-02-25 17:16:45,290 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 12:17:04] 2025-02-25 17:16:45,290 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 12:17:04] 2025-02-25 17:16:45,290 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 12:17:04] 2025-02-25 17:16:45,291 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 12:17:04] 2025-02-25 17:16:45,291 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 12:17:04] 2025-02-25 17:16:45,291 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 12:17:04] 2025-02-25 17:16:45,291 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 12:17:04] 2025-02-25 17:16:45,291 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 12:17:04] 2025-02-25 17:16:45,291 | INFO     | job 6530445341 has completed (purged errors)
[2025-02-25 12:17:04] 2025-02-25 17:16:45,291 | INFO     | overall cleanup function is called
[2025-02-25 12:17:04] 2025-02-25 17:16:46,299 | INFO     | --- collectZombieJob: --- 10, [1997545]
[2025-02-25 12:17:04] 2025-02-25 17:16:46,299 | INFO     | zombie collector waiting for pid 1997545
[2025-02-25 12:17:04] 2025-02-25 17:16:46,299 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 12:17:04] 2025-02-25 17:16:46,299 | INFO     | collected zombie processes
[2025-02-25 12:17:04] 2025-02-25 17:16:46,299 | INFO     | will attempt to kill all subprocesses of pid=1997545
[2025-02-25 12:17:04] 2025-02-25 17:16:46,412 | INFO     | process IDs to be killed: [1997545] (in reverse order)
[2025-02-25 12:17:04] 2025-02-25 17:16:46,479 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 12:17:04] 2025-02-25 17:16:46,479 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 12:17:04] 2025-02-25 17:16:46,487 | INFO     | did not find any defunct processes belonging to 1997545
[2025-02-25 12:17:04] 2025-02-25 17:16:46,494 | INFO     | did not find any defunct processes belonging to 1997545
[2025-02-25 12:17:04] 2025-02-25 17:16:46,495 | INFO     | ready for new job
[2025-02-25 12:17:04] 2025-02-25 17:16:46,495 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 12:17:04] 2025-02-25 17:16:46,496 | INFO     | **************************************
[2025-02-25 12:17:04] 2025-02-25 17:16:46,496 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 12:17:04] 2025-02-25 17:16:46,496 | INFO     | **************************************
[2025-02-25 12:17:04] 2025-02-25 17:16:46,496 | INFO     | 
[2025-02-25 12:17:04] 2025-02-25 17:16:46,511 | INFO     | architecture information:
[2025-02-25 12:17:04] 2025-02-25 17:16:46,511 | INFO     | executing command: cat /etc/os-release
[2025-02-25 12:17:04] 2025-02-25 17:16:46,524 | INFO     | cat /etc/os-release:
[2025-02-25 12:17:04] NAME="CentOS Linux"
[2025-02-25 12:17:04] VERSION="7 (Core)"
[2025-02-25 12:17:04] ID="centos"
[2025-02-25 12:17:04] ID_LIKE="rhel fedora"
[2025-02-25 12:17:04] VERSION_ID="7"
[2025-02-25 12:17:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 12:17:04] ANSI_COLOR="0;31"
[2025-02-25 12:17:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 12:17:04] HOME_URL="https://www.centos.org/"
[2025-02-25 12:17:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 12:17:04] 
[2025-02-25 12:17:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 12:17:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 12:17:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 12:17:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 12:17:04] 
[2025-02-25 12:17:04] 2025-02-25 17:16:46,524 | INFO     | **************************************
[2025-02-25 12:17:04] 2025-02-25 17:16:47,026 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-25 12:17:04] 2025-02-25 17:16:47,039 | INFO     | sufficient remaining disk space (75099013120 B)
[2025-02-25 12:17:04] 2025-02-25 17:16:47,039 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 12:17:04] 2025-02-25 17:16:47,039 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 12:17:04] 2025-02-25 17:16:47,039 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 12:17:04] 2025-02-25 17:16:47,298 | INFO     | all payload control threads have been joined
[2025-02-25 12:17:04] 2025-02-25 17:16:47,337 | INFO     | all data control threads have been joined
[2025-02-25 12:17:04] 2025-02-25 17:16:47,474 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-02-25 12:17:04] 2025-02-25 17:16:47,475 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-02-25 12:17:04] 2025-02-25 17:16:47,475 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 12:17:04] 2025-02-25 17:16:47,475 | INFO     | will abort loop
[2025-02-25 12:17:04] 2025-02-25 17:16:47,965 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 12:17:04] 2025-02-25 17:16:47,965 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 12:17:04] 2025-02-25 17:16:47,965 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 12:17:04] 2025-02-25 17:16:48,044 | INFO     | [job] retrieve thread has finished
[2025-02-25 12:17:04] 2025-02-25 17:16:48,234 | INFO     | [payload] validate_post thread has finished
[2025-02-25 12:17:04] 2025-02-25 17:16:48,255 | INFO     | all job control threads have been joined
[2025-02-25 12:17:04] 2025-02-25 17:16:48,304 | INFO     | [payload] control thread has finished
[2025-02-25 12:17:04] 2025-02-25 17:16:48,332 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 12:17:04] 2025-02-25 17:16:48,342 | INFO     | [data] control thread has finished
[2025-02-25 12:17:04] 2025-02-25 17:16:48,428 | INFO     | [payload] failed_post thread has finished
[2025-02-25 12:17:04] 2025-02-25 17:16:48,476 | INFO     | [job] job monitor thread has finished
[2025-02-25 12:17:04] 2025-02-25 17:16:48,838 | INFO     | [data] copytool_in thread has finished
[2025-02-25 12:17:04] 2025-02-25 17:16:48,852 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 12:17:04] 2025-02-25 17:16:48,869 | INFO     | [job] validate thread has finished
[2025-02-25 12:17:04] 2025-02-25 17:16:49,123 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 12:17:04] 2025-02-25 17:16:49,158 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 12:17:04] 2025-02-25 17:16:49,260 | INFO     | [job] control thread has finished
[2025-02-25 12:17:04] 2025-02-25 17:16:49,813 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 12:17:04] 2025-02-25 17:16:50,337 | INFO     | [data] copytool_out thread has finished
[2025-02-25 12:17:04] 2025-02-25 17:16:50,819 | INFO     | [job] queue monitor thread has finished
[2025-02-25 12:17:04] 2025-02-25 17:16:51,045 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 12:17:04] 2025-02-25 17:16:57,238 | INFO     | job.realtimelogging is not enabled
[2025-02-25 12:17:04] 2025-02-25 17:16:58,243 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 12:17:04] 2025-02-25 17:16:59,343 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140462550931264)>', '<ExcThread(monitor, started 140461930964736)>']
[2025-02-25 12:17:04] 2025-02-25 17:17:00,021 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 12:17:04] 2025-02-25 17:17:00,021 | INFO     | [monitor] control thread has ended
[2025-02-25 12:17:04] 2025-02-25 17:17:04,368 | INFO     | all workflow threads have been joined
[2025-02-25 12:17:04] 2025-02-25 17:17:04,369 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 12:17:04] 2025-02-25 17:17:04,369 | INFO     | traces error code: 0
[2025-02-25 12:17:04] 2025-02-25 17:17:04,369 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 12:17:04] 2025-02-25 17:17:04,499 [wrapper] ==== pilot stdout END ====
[2025-02-25 12:17:04] 2025-02-25 17:17:04,500 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 12:17:04] 2025-02-25 17:17:04,502 [wrapper] pilotpid: 1979101
[2025-02-25 12:17:04] 2025-02-25 17:17:04,504 [wrapper] Pilot exit status: 0
[2025-02-25 12:17:04] 2025-02-25 17:17:04,510 [wrapper] pandaids: 6530445341
[2025-02-25 12:17:04] 2025-02-25 17:17:04,567 [wrapper] cleanup supervisor_pilot 2370473 1979102
[2025-02-25 12:17:04] 2025-02-25 17:17:04,569 [wrapper] Test setup, not cleaning
[2025-02-25 12:17:04] 2025-02-25 17:17:04,572 [wrapper] apfmon messages muted
[2025-02-25 12:17:04] 2025-02-25 17:17:04,574 [wrapper] ==== wrapper stdout END ====
[2025-02-25 12:17:04] 2025-02-25 17:17:04,575 [wrapper] ==== wrapper stderr END ====
[2025-02-25 12:17:04]  *** Error codes and diagnostics ***
[2025-02-25 12:17:04]     "exeErrorCode": 0,
[2025-02-25 12:17:04]     "exeErrorDiag": "",
[2025-02-25 12:17:04]     "pilotErrorCode": 0,
[2025-02-25 12:17:04]     "pilotErrorDiag": "",
[2025-02-25 12:17:04]  *** Listing of results directory ***
[2025-02-25 12:17:04] total 431508
[2025-02-25 12:17:04] -rw-r--r--. 1 boincer umatlas    491065 Feb 25 09:02 pilot3.tar.gz
[2025-02-25 12:17:04] -rw-r--r--. 1 boincer umatlas      5118 Feb 25 09:38 queuedata.json
[2025-02-25 12:17:04] -rwx------. 1 boincer umatlas     35865 Feb 25 09:38 runpilot2-wrapper.sh
[2025-02-25 12:17:04] -rw-r--r--. 1 boincer umatlas       100 Feb 25 10:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 12:17:04] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 25 10:50 run_atlas
[2025-02-25 12:17:04] -rw-r--r--. 1 boincer umatlas       105 Feb 25 10:50 job.xml
[2025-02-25 12:17:04] -rw-r--r--. 2 boincer umatlas 251625647 Feb 25 10:50 EVNT.43401169._000047.pool.root.1
[2025-02-25 12:17:04] -rw-r--r--. 2 boincer umatlas     17569 Feb 25 10:50 start_atlas.sh
[2025-02-25 12:17:04] drwxrwx--x. 2 boincer umatlas      4096 Feb 25 10:50 shared
[2025-02-25 12:17:04] -rw-r--r--. 2 boincer umatlas    503558 Feb 25 10:50 input.tar.gz
[2025-02-25 12:17:04] -rw-r--r--. 1 boincer umatlas         0 Feb 25 10:50 boinc_lockfile
[2025-02-25 12:17:04] -rw-r--r--. 1 boincer umatlas      2549 Feb 25 10:50 pandaJob.out
[2025-02-25 12:17:04] -rw-------. 1 boincer umatlas       467 Feb 25 10:50 setup.sh.local
[2025-02-25 12:17:04] -rw-------. 1 boincer umatlas    988282 Feb 25 10:50 agis_schedconf.cvmfs.json
[2025-02-25 12:17:04] -rw-------. 1 boincer umatlas   1577983 Feb 25 10:50 agis_ddmendpoints.agis.ALL.json
[2025-02-25 12:17:04] drwx------. 4 boincer umatlas      4096 Feb 25 10:50 pilot3
[2025-02-25 12:17:04] -rw-r--r--. 1 boincer umatlas      6840 Feb 25 12:10 init_data.xml
[2025-02-25 12:17:04] -rw-------. 1 boincer umatlas        95 Feb 25 12:16 pilot_heartbeat.json
[2025-02-25 12:17:04] -rw-------. 1 boincer umatlas 184790119 Feb 25 12:16 HITS.43401171._001030.pool.root.1
[2025-02-25 12:17:04] -rw-r--r--. 1 boincer umatlas       529 Feb 25 12:16 boinc_task_state.xml
[2025-02-25 12:17:04] -rw-------. 1 boincer umatlas      1038 Feb 25 12:16 memory_monitor_summary.json
[2025-02-25 12:17:04] -rw-------. 1 boincer umatlas    315792 Feb 25 12:16 log.43401171._001030.job.log.tgz.1
[2025-02-25 12:17:04] -rw-------. 1 boincer umatlas      7730 Feb 25 12:16 heartbeat.json
[2025-02-25 12:17:04] -rw-r--r--. 1 boincer umatlas      8192 Feb 25 12:17 boinc_mmap_file
[2025-02-25 12:17:04] -rw-r--r--. 1 boincer umatlas        27 Feb 25 12:17 wrapper_checkpoint.txt
[2025-02-25 12:17:04] -rw-------. 1 boincer umatlas      4473 Feb 25 12:17 pilotlog.txt
[2025-02-25 12:17:04] -rw-------. 1 boincer umatlas    509782 Feb 25 12:17 log.43401171._001030.job.log.1
[2025-02-25 12:17:04] -rw-------. 1 boincer umatlas       357 Feb 25 12:17 output.list
[2025-02-25 12:17:04] -rw-r--r--. 1 boincer umatlas       620 Feb 25 12:17 runtime_log
[2025-02-25 12:17:04] -rw-------. 1 boincer umatlas    839680 Feb 25 12:17 result.tar.gz
[2025-02-25 12:17:04] -rw-------. 1 boincer umatlas       652 Feb 25 12:17 NjoKDmIGB76n9Rq4apOajLDm4fhM0noT9bVoFjIUDmVufKDmXUTp1m.diag
[2025-02-25 12:17:04] -rw-r--r--. 1 boincer umatlas     11418 Feb 25 12:17 runtime_log.err
[2025-02-25 12:17:04] -rw-r--r--. 1 boincer umatlas     22421 Feb 25 12:17 stderr.txt
[2025-02-25 12:17:04] HITS file was successfully produced:
[2025-02-25 12:17:04] -rw-------. 1 boincer umatlas 184790119 Feb 25 12:16 shared/HITS.pool.root.1
[2025-02-25 12:17:04]  *** Contents of shared directory: ***
[2025-02-25 12:17:04] total 427528
[2025-02-25 12:17:04] -rw-r--r--. 2 boincer umatlas 251625647 Feb 25 10:50 ATLAS.root_0
[2025-02-25 12:17:04] -rw-r--r--. 2 boincer umatlas     17569 Feb 25 10:50 start_atlas.sh
[2025-02-25 12:17:04] -rw-r--r--. 2 boincer umatlas    503558 Feb 25 10:50 input.tar.gz
[2025-02-25 12:17:04] -rw-------. 1 boincer umatlas 184790119 Feb 25 12:16 HITS.pool.root.1
[2025-02-25 12:17:04] -rw-------. 1 boincer umatlas    839680 Feb 25 12:17 result.tar.gz
12:17:05 (1975105): run_atlas exited; CPU time 35857.379136
12:17:05 (1975105): called boinc_finish(0)

</stderr_txt>
]]>

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