Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:08:16 (18799): wrapper (7.7.26015): starting
10:08:16 (18799): wrapper: running run_atlas (--nthreads 12)
[2025-02-25 10:08:16] Arguments: --nthreads 12
[2025-02-25 10:08:16] Threads: 12
[2025-02-25 10:08:16] Checking for CVMFS
[2025-02-25 10:08:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 10:08:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 10:08:16] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 10:08:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 10:08:16] 2.11.2.0 12163 292794 153696 143041 3 55 18005549 20275201 1 130560 0 24384921 99.986 7926804 42408 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-25 10:08:16] CVMFS is ok
[2025-02-25 10:08:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 10:08:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 10:08:16] Further information can be found at the LHC@home message board.
[2025-02-25 10:08:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 10:08:16] Checking for apptainer binary...
[2025-02-25 10:08:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 10:08:16] Running /usr/bin/apptainer --version
[2025-02-25 10:08:16] apptainer version 1.3.2-1.el7
[2025-02-25 10:08:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 10:08:18] c-205-20.aglt2.org
[2025-02-25 10:08:18] apptainer works
[2025-02-25 10:08:18] Set ATHENA_PROC_NUMBER=12
[2025-02-25 10:08:18] Set ATHENA_CORE_NUMBER=12
[2025-02-25 10:08:18] Starting ATLAS job with PandaID=6530434798
[2025-02-25 10:08:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 11:32:16]  *** The last 200 lines of the pilot log: ***
[2025-02-25 11:32:16]  is_tar=False
[2025-02-25 11:32:16]  lfn=log.43401163._000552.job.log.tgz.1
[2025-02-25 11:32:16]  mtime=0
[2025-02-25 11:32:16]  protocol_id=None
[2025-02-25 11:32:16]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-25 11:32:16]  replicas=None
[2025-02-25 11:32:16]  scope=mc23_13p6TeV
[2025-02-25 11:32:16]  status=None
[2025-02-25 11:32:16]  status_code=0
[2025-02-25 11:32:16]  storage_token=
[2025-02-25 11:32:16]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6530434798/log.43401163._000552.job.log.tgz.1
[2025-02-25 11:32:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5d/64/log.43401163._000552.job.log.tgz.1
[2025-02-25 11:32:16]  workdir=None
[2025-02-25 11:32:16] ]
[2025-02-25 11:32:16] 2025-02-25 16:31:51,984 | INFO     | transferring file log.43401163._000552.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6530434798/log.43401163._000552.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-02-25 11:32:16] 2025-02-25 16:31:51,984 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6530434798/log.43401163._000552.job.log.tgz.1 /tmp/boinchome/slots/0/log.43401163._000552.job
[2025-02-25 11:32:16] 2025-02-25 16:31:52,006 | INFO     | adding to output.list: log.43401163._000552.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5d/64/log.43401163._000552.job.log.tg
[2025-02-25 11:32:16] 2025-02-25 16:31:52,006 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-25 11:32:16] 2025-02-25 16:31:52,007 | INFO     | summary of transferred files:
[2025-02-25 11:32:16] 2025-02-25 16:31:52,007 | INFO     |  -- lfn=log.43401163._000552.job.log.tgz.1, status_code=0, status=transferred
[2025-02-25 11:32:16] 2025-02-25 16:31:52,007 | INFO     | stage-out finished correctly
[2025-02-25 11:32:16] 2025-02-25 16:31:53,049 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-25 11:32:16] 2025-02-25 16:31:53,135 | INFO     | monitor loop #368: job 0:6530434798 is in state 'finished'
[2025-02-25 11:32:16] 2025-02-25 16:31:53,135 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 11:32:16] 2025-02-25 16:31:53,340 | INFO     | job 6530434798 has state=finished
[2025-02-25 11:32:16] 2025-02-25 16:31:53,341 | INFO     | preparing for final server update for job 6530434798 in state='finished'
[2025-02-25 11:32:16] 2025-02-25 16:31:53,341 | INFO     | this job has now completed (state=finished)
[2025-02-25 11:32:16] 2025-02-25 16:31:53,341 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-25 11:32:16] 2025-02-25 16:31:53,342 | INFO     | log transfer has been attempted: DONE
[2025-02-25 11:32:16] 2025-02-25 16:31:53,342 | INFO     | job 6530434798 has finished - writing final server update
[2025-02-25 11:32:16] 2025-02-25 16:31:53,342 | INFO     | total number of processed events: 400 (read)
[2025-02-25 11:32:16] 2025-02-25 16:31:53,344 | INFO     | executing command: lscpu
[2025-02-25 11:32:16] 2025-02-25 16:31:53,369 | INFO     | found 12 cores (6 cores per socket, 2 sockets)
[2025-02-25 11:32:16] 2025-02-25 16:31:53,382 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-25 11:32:16] 2025-02-25 16:31:55,638 | INFO     | monitor loop #369: job 0:6530434798 is in state 'finished'
[2025-02-25 11:32:16] 2025-02-25 16:31:55,641 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 11:32:16] 2025-02-25 16:31:58,143 | INFO     | monitor loop #370: job 0:6530434798 is in state 'finished'
[2025-02-25 11:32:16] 2025-02-25 16:31:58,144 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 11:32:16] 2025-02-25 16:31:58,441 | INFO     | CPU arch script returned: x86-64-v2
[2025-02-25 11:32:16] 2025-02-25 16:31:58,441 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6530434798/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 11:32:16] 2025-02-25 16:31:58,443 | INFO     | extracted standard info from prmon json
[2025-02-25 11:32:16] 2025-02-25 16:31:58,443 | INFO     | extracted standard memory fields from prmon json
[2025-02-25 11:32:16] 2025-02-25 16:31:58,443 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-25 11:32:16] 2025-02-25 16:31:58,444 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 11:32:16] 2025-02-25 16:31:58,444 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 11:32:16] 2025-02-25 16:31:58,446 | INFO     | fitting pss+swap vs Time
[2025-02-25 11:32:16] 2025-02-25 16:31:58,447 | INFO     | model: linear, x: [1740496445.0, 1740496506.0, 1740496567.0, 1740496628.0, 1740496689.0, 1740496750.0, 1740496811.0, 1740496872.0, 1740496933.0, 1740496994.0, 1740
[2025-02-25 11:32:16] 2025-02-25 16:31:58,447 | INFO     | sum of square deviations: 130793150.0
[2025-02-25 11:32:16] 2025-02-25 16:31:58,448 | INFO     | sum of deviations: 29055910155.999992
[2025-02-25 11:32:16] 2025-02-25 16:31:58,448 | INFO     | mean x: 1740498702.0
[2025-02-25 11:32:16] 2025-02-25 16:31:58,448 | INFO     | mean y: 2542624.44
[2025-02-25 11:32:16] 2025-02-25 16:31:58,448 | INFO     | -- intersect: -386652063614.08704
[2025-02-25 11:32:16] 2025-02-25 16:31:58,448 | INFO     | intersect: -386652063614.08704
[2025-02-25 11:32:16] 2025-02-25 16:31:58,448 | INFO     | chi2: 2.5524568980889337
[2025-02-25 11:32:16] 2025-02-25 16:31:58,448 | INFO     | -- intersect: -386652063614.08704
[2025-02-25 11:32:16] 2025-02-25 16:31:58,448 | INFO     | current memory leak: 222.15 B/s (using 75 data points, chi2=2.55)
[2025-02-25 11:32:16] 2025-02-25 16:31:58,449 | INFO     | ..............................
[2025-02-25 11:32:16] 2025-02-25 16:31:58,449 | INFO     | . Timing measurements:
[2025-02-25 11:32:16] 2025-02-25 16:31:58,449 | INFO     | . get job = 0 s
[2025-02-25 11:32:16] 2025-02-25 16:31:58,449 | INFO     | . initial setup = 2 s
[2025-02-25 11:32:16] 2025-02-25 16:31:58,449 | INFO     | . payload setup = 7 s
[2025-02-25 11:32:16] 2025-02-25 16:31:58,449 | INFO     | . stage-in = 0 s
[2025-02-25 11:32:16] 2025-02-25 16:31:58,449 | INFO     | . payload execution = 4973 s
[2025-02-25 11:32:16] 2025-02-25 16:31:58,450 | INFO     | . stage-out = 0 s
[2025-02-25 11:32:16] 2025-02-25 16:31:58,450 | INFO     | . log creation = 0 s
[2025-02-25 11:32:16] 2025-02-25 16:31:58,450 | INFO     | ..............................
[2025-02-25 11:32:16] 2025-02-25 16:31:58,532 | INFO     | 
[2025-02-25 11:32:16] 2025-02-25 16:31:58,533 | INFO     | job summary report
[2025-02-25 11:32:16] 2025-02-25 16:31:58,533 | INFO     | --------------------------------------------------
[2025-02-25 11:32:16] 2025-02-25 16:31:58,533 | INFO     | PanDA job id: 6530434798
[2025-02-25 11:32:16] 2025-02-25 16:31:58,533 | INFO     | task id: 43401163
[2025-02-25 11:32:16] 2025-02-25 16:31:58,533 | INFO     | errors: (none)
[2025-02-25 11:32:16] 2025-02-25 16:31:58,533 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 11:32:16] 2025-02-25 16:31:58,534 | INFO     | pilot state: finished 
[2025-02-25 11:32:16] 2025-02-25 16:31:58,534 | INFO     | transexitcode: 0
[2025-02-25 11:32:16] 2025-02-25 16:31:58,534 | INFO     | exeerrorcode: 0
[2025-02-25 11:32:16] 2025-02-25 16:31:58,534 | INFO     | exeerrordiag: 
[2025-02-25 11:32:16] 2025-02-25 16:31:58,534 | INFO     | exitcode: 0
[2025-02-25 11:32:16] 2025-02-25 16:31:58,534 | INFO     | exitmsg: OK
[2025-02-25 11:32:16] 2025-02-25 16:31:58,535 | INFO     | cpuconsumptiontime: 46926 s
[2025-02-25 11:32:16] 2025-02-25 16:31:58,535 | INFO     | nevents: 400
[2025-02-25 11:32:16] 2025-02-25 16:31:58,535 | INFO     | neventsw: 0
[2025-02-25 11:32:16] 2025-02-25 16:31:58,535 | INFO     | pid: 28815
[2025-02-25 11:32:16] 2025-02-25 16:31:58,535 | INFO     | pgrp: 28815
[2025-02-25 11:32:16] 2025-02-25 16:31:58,535 | INFO     | corecount: 12
[2025-02-25 11:32:16] 2025-02-25 16:31:58,535 | INFO     | event service: False
[2025-02-25 11:32:16] 2025-02-25 16:31:58,536 | INFO     | sizes: {0: 2376766, 1: 2376965, 5: 2377171, 11: 2377227, 4984: 2403311, 4985: 2412252, 4986: 2412436, 4992: 2412606}
[2025-02-25 11:32:16] 2025-02-25 16:31:58,536 | INFO     | --------------------------------------------------
[2025-02-25 11:32:16] 2025-02-25 16:31:58,536 | INFO     | 
[2025-02-25 11:32:16] 2025-02-25 16:31:58,536 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-25 11:32:16] 2025-02-25 16:31:58,561 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 11:32:16] 2025-02-25 16:31:58,561 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 11:32:16] 2025-02-25 16:31:58,561 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 11:32:16] 2025-02-25 16:31:58,562 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 11:32:16] 2025-02-25 16:31:58,562 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 11:32:16] 2025-02-25 16:31:58,562 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 11:32:16] 2025-02-25 16:31:58,562 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 11:32:16] 2025-02-25 16:31:58,562 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 11:32:16] 2025-02-25 16:31:58,562 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 11:32:16] 2025-02-25 16:31:58,563 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 11:32:16] 2025-02-25 16:31:58,563 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 11:32:16] 2025-02-25 16:31:58,563 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 11:32:16] 2025-02-25 16:31:58,563 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 11:32:16] 2025-02-25 16:31:58,563 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 11:32:16] 2025-02-25 16:31:58,563 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 11:32:16] 2025-02-25 16:31:58,564 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 11:32:16] 2025-02-25 16:31:58,564 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 11:32:16] 2025-02-25 16:31:58,564 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 11:32:16] 2025-02-25 16:31:58,564 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 11:32:16] 2025-02-25 16:31:58,564 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 11:32:16] 2025-02-25 16:31:58,564 | INFO     | job 6530434798 has completed (purged errors)
[2025-02-25 11:32:16] 2025-02-25 16:31:58,565 | INFO     | overall cleanup function is called
[2025-02-25 11:32:16] 2025-02-25 16:31:59,573 | INFO     | --- collectZombieJob: --- 10, [28815]
[2025-02-25 11:32:16] 2025-02-25 16:31:59,573 | INFO     | zombie collector waiting for pid 28815
[2025-02-25 11:32:16] 2025-02-25 16:31:59,573 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 11:32:16] 2025-02-25 16:31:59,573 | INFO     | collected zombie processes
[2025-02-25 11:32:16] 2025-02-25 16:31:59,573 | INFO     | will attempt to kill all subprocesses of pid=28815
[2025-02-25 11:32:16] 2025-02-25 16:31:59,638 | INFO     | process IDs to be killed: [28815] (in reverse order)
[2025-02-25 11:32:16] 2025-02-25 16:31:59,685 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 11:32:16] 2025-02-25 16:31:59,686 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 11:32:16] 2025-02-25 16:31:59,689 | INFO     | did not find any defunct processes belonging to 28815
[2025-02-25 11:32:16] 2025-02-25 16:31:59,692 | INFO     | did not find any defunct processes belonging to 28815
[2025-02-25 11:32:16] 2025-02-25 16:31:59,692 | INFO     | ready for new job
[2025-02-25 11:32:16] 2025-02-25 16:31:59,693 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 11:32:16] 2025-02-25 16:31:59,694 | INFO     | **************************************
[2025-02-25 11:32:16] 2025-02-25 16:31:59,694 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 11:32:16] 2025-02-25 16:31:59,694 | INFO     | **************************************
[2025-02-25 11:32:16] 2025-02-25 16:31:59,694 | INFO     | 
[2025-02-25 11:32:16] 2025-02-25 16:31:59,695 | INFO     | architecture information:
[2025-02-25 11:32:16] 2025-02-25 16:31:59,696 | INFO     | executing command: cat /etc/os-release
[2025-02-25 11:32:16] 2025-02-25 16:31:59,711 | INFO     | cat /etc/os-release:
[2025-02-25 11:32:16] NAME="CentOS Linux"
[2025-02-25 11:32:16] VERSION="7 (Core)"
[2025-02-25 11:32:16] ID="centos"
[2025-02-25 11:32:16] ID_LIKE="rhel fedora"
[2025-02-25 11:32:16] VERSION_ID="7"
[2025-02-25 11:32:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 11:32:16] ANSI_COLOR="0;31"
[2025-02-25 11:32:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 11:32:16] HOME_URL="https://www.centos.org/"
[2025-02-25 11:32:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 11:32:16] 
[2025-02-25 11:32:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 11:32:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 11:32:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 11:32:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 11:32:16] 
[2025-02-25 11:32:16] 2025-02-25 16:31:59,711 | INFO     | **************************************
[2025-02-25 11:32:16] 2025-02-25 16:32:00,214 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-25 11:32:16] 2025-02-25 16:32:00,230 | INFO     | sufficient remaining disk space (29362225152 B)
[2025-02-25 11:32:16] 2025-02-25 16:32:00,230 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 11:32:16] 2025-02-25 16:32:00,231 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 11:32:16] 2025-02-25 16:32:00,231 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 11:32:16] 2025-02-25 16:32:00,231 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 11:32:16] 2025-02-25 16:32:00,232 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-25 11:32:16] 2025-02-25 16:32:00,232 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 11:32:16] 2025-02-25 16:32:00,232 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 11:32:16] 2025-02-25 16:32:00,232 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 11:32:16] 2025-02-25 16:32:00,647 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-02-25 11:32:16] 2025-02-25 16:32:00,653 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-02-25 11:32:16] 2025-02-25 16:32:00,653 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 11:32:16] 2025-02-25 16:32:00,654 | INFO     | will abort loop
[2025-02-25 11:32:16] 2025-02-25 16:32:00,971 | INFO     | all payload control threads have been joined
[2025-02-25 11:32:16] 2025-02-25 16:32:00,992 | INFO     | all data control threads have been joined
[2025-02-25 11:32:16] 2025-02-25 16:32:01,125 | INFO     | all job control threads have been joined
[2025-02-25 11:32:16] 2025-02-25 16:32:01,236 | INFO     | [job] retrieve thread has finished
[2025-02-25 11:32:16] 2025-02-25 16:32:01,237 | INFO     | [job] queue monitor thread has finished
[2025-02-25 11:32:16] 2025-02-25 16:32:01,434 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 11:32:16] 2025-02-25 16:32:01,476 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 11:32:16] 2025-02-25 16:32:01,590 | INFO     | [data] copytool_in thread has finished
[2025-02-25 11:32:16] 2025-02-25 16:32:01,659 | INFO     | [job] job monitor thread has finished
[2025-02-25 11:32:16] 2025-02-25 16:32:01,746 | INFO     | [payload] validate_post thread has finished
[2025-02-25 11:32:16] 2025-02-25 16:32:01,976 | INFO     | [payload] control thread has finished
[2025-02-25 11:32:16] 2025-02-25 16:32:01,994 | INFO     | [data] control thread has finished
[2025-02-25 11:32:16] 2025-02-25 16:32:02,131 | INFO     | [job] control thread has finished
[2025-02-25 11:32:16] 2025-02-25 16:32:02,237 | INFO     | [data] copytool_out thread has finished
[2025-02-25 11:32:16] 2025-02-25 16:32:02,373 | INFO     | [payload] failed_post thread has finished
[2025-02-25 11:32:16] 2025-02-25 16:32:02,378 | INFO     | [job] validate thread has finished
[2025-02-25 11:32:16] 2025-02-25 16:32:02,565 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 11:32:16] 2025-02-25 16:32:03,640 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 11:32:16] 2025-02-25 16:32:07,646 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 11:32:16] 2025-02-25 16:32:10,544 | INFO     | job.realtimelogging is not enabled
[2025-02-25 11:32:16] 2025-02-25 16:32:11,549 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 11:32:16] 2025-02-25 16:32:11,603 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140610078590784)>', '<ExcThread(monitor, started 140608958093056)>']
[2025-02-25 11:32:16] 2025-02-25 16:32:12,293 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 11:32:16] 2025-02-25 16:32:12,294 | INFO     | [monitor] control thread has ended
[2025-02-25 11:32:16] 2025-02-25 16:32:16,629 | INFO     | all workflow threads have been joined
[2025-02-25 11:32:16] 2025-02-25 16:32:16,629 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 11:32:16] 2025-02-25 16:32:16,631 | INFO     | traces error code: 0
[2025-02-25 11:32:16] 2025-02-25 16:32:16,632 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 11:32:16] 2025-02-25 16:32:16,718 [wrapper] ==== pilot stdout END ====
[2025-02-25 11:32:16] 2025-02-25 16:32:16,722 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 11:32:16] 2025-02-25 16:32:16,725 [wrapper] pilotpid: 22415
[2025-02-25 11:32:16] 2025-02-25 16:32:16,729 [wrapper] Pilot exit status: 0
[2025-02-25 11:32:16] 2025-02-25 16:32:16,744 [wrapper] pandaids: 6530434798
[2025-02-25 11:32:16] 2025-02-25 16:32:16,786 [wrapper] cleanup supervisor_pilot 18122 22416
[2025-02-25 11:32:16] 2025-02-25 16:32:16,790 [wrapper] Test setup, not cleaning
[2025-02-25 11:32:16] 2025-02-25 16:32:16,797 [wrapper] apfmon messages muted
[2025-02-25 11:32:16] 2025-02-25 16:32:16,801 [wrapper] ==== wrapper stdout END ====
[2025-02-25 11:32:16] 2025-02-25 16:32:16,805 [wrapper] ==== wrapper stderr END ====
[2025-02-25 11:32:16]  *** Error codes and diagnostics ***
[2025-02-25 11:32:16]     "exeErrorCode": 0,
[2025-02-25 11:32:16]     "exeErrorDiag": "",
[2025-02-25 11:32:16]     "pilotErrorCode": 0,
[2025-02-25 11:32:16]     "pilotErrorDiag": "",
[2025-02-25 11:32:16]  *** Listing of results directory ***
[2025-02-25 11:32:16] total 427416
[2025-02-25 11:32:16] -rw-r--r-- 1 boincer umatlas    491065 Feb 25 09:02 pilot3.tar.gz
[2025-02-25 11:32:16] -rw-r--r-- 1 boincer umatlas      5118 Feb 25 09:29 queuedata.json
[2025-02-25 11:32:16] -rwx------ 1 boincer umatlas     35865 Feb 25 09:29 runpilot2-wrapper.sh
[2025-02-25 11:32:16] -rw-r--r-- 1 boincer umatlas       100 Feb 25 10:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 11:32:16] -rwxr-xr-x 1 boincer umatlas      7986 Feb 25 10:08 run_atlas
[2025-02-25 11:32:16] -rw-r--r-- 1 boincer umatlas       105 Feb 25 10:08 job.xml
[2025-02-25 11:32:16] -rw-r--r-- 2 boincer umatlas 250976396 Feb 25 10:08 EVNT.43401161._000023.pool.root.1
[2025-02-25 11:32:16] drwxrwx--x 2 boincer umatlas      4096 Feb 25 10:08 shared
[2025-02-25 11:32:16] -rw-r--r-- 2 boincer umatlas    503543 Feb 25 10:08 input.tar.gz
[2025-02-25 11:32:16] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 10:08 start_atlas.sh
[2025-02-25 11:32:16] -rw-r--r-- 1 boincer umatlas         0 Feb 25 10:08 boinc_lockfile
[2025-02-25 11:32:16] -rw-r--r-- 1 boincer umatlas      2538 Feb 25 10:08 pandaJob.out
[2025-02-25 11:32:16] -rw------- 1 boincer umatlas       424 Feb 25 10:08 setup.sh.local
[2025-02-25 11:32:16] -rw------- 1 boincer umatlas    988282 Feb 25 10:08 agis_schedconf.cvmfs.json
[2025-02-25 11:32:16] -rw------- 1 boincer umatlas   1577983 Feb 25 10:08 agis_ddmendpoints.agis.ALL.json
[2025-02-25 11:32:16] drwx------ 4 boincer umatlas      4096 Feb 25 10:08 pilot3
[2025-02-25 11:32:16] -rw-r--r-- 1 boincer umatlas      5869 Feb 25 11:28 init_data.xml
[2025-02-25 11:32:16] -rw------- 1 boincer umatlas 181255838 Feb 25 11:31 HITS.43401163._000552.pool.root.1
[2025-02-25 11:32:16] -rw-r--r-- 1 boincer umatlas       529 Feb 25 11:31 boinc_task_state.xml
[2025-02-25 11:32:16] -rw------- 1 boincer umatlas        95 Feb 25 11:31 pilot_heartbeat.json
[2025-02-25 11:32:16] -rw-r--r-- 1 boincer umatlas        27 Feb 25 11:31 wrapper_checkpoint.txt
[2025-02-25 11:32:16] -rw------- 1 boincer umatlas      1046 Feb 25 11:31 memory_monitor_summary.json
[2025-02-25 11:32:16] -rw------- 1 boincer umatlas    353778 Feb 25 11:31 log.43401163._000552.job.log.tgz.1
[2025-02-25 11:32:16] -rw------- 1 boincer umatlas      7760 Feb 25 11:31 heartbeat.json
[2025-02-25 11:32:16] -rw------- 1 boincer umatlas      4596 Feb 25 11:32 pilotlog.txt
[2025-02-25 11:32:16] -rw------- 1 boincer umatlas    468578 Feb 25 11:32 log.43401163._000552.job.log.1
[2025-02-25 11:32:16] -rw------- 1 boincer umatlas       357 Feb 25 11:32 output.list
[2025-02-25 11:32:16] -rw-r--r-- 1 boincer umatlas       620 Feb 25 11:32 runtime_log
[2025-02-25 11:32:16] -rw------- 1 boincer umatlas    839680 Feb 25 11:32 result.tar.gz
[2025-02-25 11:32:16] -rw-r--r-- 1 boincer umatlas      8192 Feb 25 11:32 boinc_mmap_file
[2025-02-25 11:32:16] -rw-r--r-- 1 boincer umatlas     11015 Feb 25 11:32 runtime_log.err
[2025-02-25 11:32:16] -rw------- 1 boincer umatlas       659 Feb 25 11:32 1jNODmV7A76n9Rq4apOajLDm4fhM0noT9bVoFjIUDmApfKDmptyM8n.diag
[2025-02-25 11:32:16] -rw-r--r-- 1 boincer umatlas     21606 Feb 25 11:32 stderr.txt
[2025-02-25 11:32:16] HITS file was successfully produced:
[2025-02-25 11:32:16] -rw------- 1 boincer umatlas 181255838 Feb 25 11:31 shared/HITS.pool.root.1
[2025-02-25 11:32:16]  *** Contents of shared directory: ***
[2025-02-25 11:32:16] total 423440
[2025-02-25 11:32:16] -rw-r--r-- 2 boincer umatlas 250976396 Feb 25 10:08 ATLAS.root_0
[2025-02-25 11:32:16] -rw-r--r-- 2 boincer umatlas    503543 Feb 25 10:08 input.tar.gz
[2025-02-25 11:32:16] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 10:08 start_atlas.sh
[2025-02-25 11:32:16] -rw------- 1 boincer umatlas 181255838 Feb 25 11:31 HITS.pool.root.1
[2025-02-25 11:32:16] -rw------- 1 boincer umatlas    839680 Feb 25 11:32 result.tar.gz
11:32:17 (18799): run_atlas exited; CPU time 46854.932552
11:32:17 (18799): called boinc_finish(0)

</stderr_txt>
]]>

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