Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:46:16 (15711): wrapper (7.7.26015): starting
09:46:16 (15711): wrapper: running run_atlas (--nthreads 12)
[2025-02-25 09:46:16] Arguments: --nthreads 12
[2025-02-25 09:46:16] Threads: 12
[2025-02-25 09:46:16] Checking for CVMFS
[2025-02-25 09:46:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 09:46:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 09:46:16] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 09:46:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 09:46:16] 2.11.2.0 32467 301474 148596 143041 0 56 18961313 20275200 1 130560 0 23672188 99.986 7579592 43805 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-25 09:46:16] CVMFS is ok
[2025-02-25 09:46:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 09:46:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 09:46:16] Further information can be found at the LHC@home message board.
[2025-02-25 09:46:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 09:46:16] Checking for apptainer binary...
[2025-02-25 09:46:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 09:46:16] Running /usr/bin/apptainer --version
[2025-02-25 09:46:16] apptainer version 1.3.2-1.el7
[2025-02-25 09:46:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 09:46:18] c-205-12.aglt2.org
[2025-02-25 09:46:18] apptainer works
[2025-02-25 09:46:18] Set ATHENA_PROC_NUMBER=12
[2025-02-25 09:46:18] Set ATHENA_CORE_NUMBER=12
[2025-02-25 09:46:18] Starting ATLAS job with PandaID=6530433759
[2025-02-25 09:46:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 11:11:18]  *** The last 200 lines of the pilot log: ***
[2025-02-25 11:11:18]  mtime=0
[2025-02-25 11:11:18]  protocol_id=None
[2025-02-25 11:11:18]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-25 11:11:18]  replicas=None
[2025-02-25 11:11:18]  scope=mc23_13p6TeV
[2025-02-25 11:11:18]  status=None
[2025-02-25 11:11:18]  status_code=0
[2025-02-25 11:11:18]  storage_token=
[2025-02-25 11:11:18]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6530433759/log.43401163._000311.job.log.tgz.1
[2025-02-25 11:11:18]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f5/6b/log.43401163._000311.job.log.tgz.1
[2025-02-25 11:11:18]  workdir=None
[2025-02-25 11:11:18] ]
[2025-02-25 11:11:18] 2025-02-25 16:10:48,418 | INFO     | transferring file log.43401163._000311.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6530433759/log.43401163._000311.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-02-25 11:11:18] 2025-02-25 16:10:48,418 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6530433759/log.43401163._000311.job.log.tgz.1 /tmp/boinchome/slots/0/log.43401163._000311.job
[2025-02-25 11:11:18] 2025-02-25 16:10:48,441 | INFO     | adding to output.list: log.43401163._000311.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f5/6b/log.43401163._000311.job.log.tg
[2025-02-25 11:11:18] 2025-02-25 16:10:48,442 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-25 11:11:18] 2025-02-25 16:10:48,442 | INFO     | summary of transferred files:
[2025-02-25 11:11:18] 2025-02-25 16:10:48,442 | INFO     |  -- lfn=log.43401163._000311.job.log.tgz.1, status_code=0, status=transferred
[2025-02-25 11:11:18] 2025-02-25 16:10:48,442 | INFO     | stage-out finished correctly
[2025-02-25 11:11:18] 2025-02-25 16:10:52,005 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-25 11:11:18] 2025-02-25 16:10:53,430 | WARNING  | process 25687 can no longer be monitored (due to stat problems) - aborting
[2025-02-25 11:11:18] 2025-02-25 16:10:53,431 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6530433759/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 11:11:18] 2025-02-25 16:10:53,491 | INFO     | number of running child processes to parent process 25687: 1
[2025-02-25 11:11:18] 2025-02-25 16:10:53,492 | INFO     | maximum number of monitored processes: 6
[2025-02-25 11:11:18] 2025-02-25 16:10:53,841 | INFO     | job 6530433759 has state=finished
[2025-02-25 11:11:18] 2025-02-25 16:10:53,841 | INFO     | preparing for final server update for job 6530433759 in state='finished'
[2025-02-25 11:11:18] 2025-02-25 16:10:53,842 | INFO     | this job has now completed (state=finished)
[2025-02-25 11:11:18] 2025-02-25 16:10:53,842 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-25 11:11:18] 2025-02-25 16:10:53,842 | INFO     | log transfer has been attempted: DONE
[2025-02-25 11:11:18] 2025-02-25 16:10:53,842 | INFO     | job 6530433759 has finished - writing final server update
[2025-02-25 11:11:18] 2025-02-25 16:10:53,843 | INFO     | total number of processed events: 400 (read)
[2025-02-25 11:11:18] 2025-02-25 16:10:53,844 | INFO     | executing command: lscpu
[2025-02-25 11:11:18] 2025-02-25 16:10:53,869 | INFO     | found 12 cores (6 cores per socket, 2 sockets)
[2025-02-25 11:11:18] 2025-02-25 16:10:53,882 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-25 11:11:18] 2025-02-25 16:10:55,995 | INFO     | monitor loop #372: job 0:6530433759 is in state 'finished'
[2025-02-25 11:11:18] 2025-02-25 16:10:55,995 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 11:11:18] 2025-02-25 16:10:58,498 | INFO     | monitor loop #373: job 0:6530433759 is in state 'finished'
[2025-02-25 11:11:18] 2025-02-25 16:10:58,498 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 11:11:18] 2025-02-25 16:10:58,925 | INFO     | CPU arch script returned: x86-64-v2
[2025-02-25 11:11:18] 2025-02-25 16:10:58,925 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6530433759/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 11:11:18] 2025-02-25 16:10:58,926 | INFO     | extracted standard info from prmon json
[2025-02-25 11:11:18] 2025-02-25 16:10:58,926 | INFO     | extracted standard memory fields from prmon json
[2025-02-25 11:11:18] 2025-02-25 16:10:58,927 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-25 11:11:18] 2025-02-25 16:10:58,927 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 11:11:18] 2025-02-25 16:10:58,927 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 11:11:18] 2025-02-25 16:10:58,930 | INFO     | fitting pss+swap vs Time
[2025-02-25 11:11:18] 2025-02-25 16:10:58,930 | INFO     | model: linear, x: [1740495125.0, 1740495186.0, 1740495247.0, 1740495308.0, 1740495369.0, 1740495430.0, 1740495491.0, 1740495552.0, 1740495613.0, 1740495674.0, 1740
[2025-02-25 11:11:18] 2025-02-25 16:10:58,930 | INFO     | sum of square deviations: 136095575.0
[2025-02-25 11:11:18] 2025-02-25 16:10:58,931 | INFO     | sum of deviations: 20869097136.5
[2025-02-25 11:11:18] 2025-02-25 16:10:58,931 | INFO     | mean x: 1740497412.5
[2025-02-25 11:11:18] 2025-02-25 16:10:58,931 | INFO     | mean y: 2583248.1447368423
[2025-02-25 11:11:18] 2025-02-25 16:10:58,931 | INFO     | -- intersect: -266887869048.261
[2025-02-25 11:11:18] 2025-02-25 16:10:58,932 | INFO     | intersect: -266887869048.261
[2025-02-25 11:11:18] 2025-02-25 16:10:58,932 | INFO     | chi2: 2.087052703970986
[2025-02-25 11:11:18] 2025-02-25 16:10:58,932 | INFO     | -- intersect: -266887869048.261
[2025-02-25 11:11:18] 2025-02-25 16:10:58,932 | INFO     | current memory leak: 153.34 B/s (using 76 data points, chi2=2.09)
[2025-02-25 11:11:18] 2025-02-25 16:10:58,932 | INFO     | ..............................
[2025-02-25 11:11:18] 2025-02-25 16:10:58,932 | INFO     | . Timing measurements:
[2025-02-25 11:11:18] 2025-02-25 16:10:58,933 | INFO     | . get job = 0 s
[2025-02-25 11:11:18] 2025-02-25 16:10:58,933 | INFO     | . initial setup = 2 s
[2025-02-25 11:11:18] 2025-02-25 16:10:58,933 | INFO     | . payload setup = 7 s
[2025-02-25 11:11:18] 2025-02-25 16:10:58,933 | INFO     | . stage-in = 0 s
[2025-02-25 11:11:18] 2025-02-25 16:10:58,933 | INFO     | . payload execution = 5029 s
[2025-02-25 11:11:18] 2025-02-25 16:10:58,933 | INFO     | . stage-out = 0 s
[2025-02-25 11:11:18] 2025-02-25 16:10:58,933 | INFO     | . log creation = 0 s
[2025-02-25 11:11:18] 2025-02-25 16:10:58,933 | INFO     | ..............................
[2025-02-25 11:11:18] 2025-02-25 16:10:59,123 | INFO     | 
[2025-02-25 11:11:18] 2025-02-25 16:10:59,123 | INFO     | job summary report
[2025-02-25 11:11:18] 2025-02-25 16:10:59,123 | INFO     | --------------------------------------------------
[2025-02-25 11:11:18] 2025-02-25 16:10:59,124 | INFO     | PanDA job id: 6530433759
[2025-02-25 11:11:18] 2025-02-25 16:10:59,124 | INFO     | task id: 43401163
[2025-02-25 11:11:18] 2025-02-25 16:10:59,124 | INFO     | errors: (none)
[2025-02-25 11:11:18] 2025-02-25 16:10:59,124 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 11:11:18] 2025-02-25 16:10:59,124 | INFO     | pilot state: finished 
[2025-02-25 11:11:18] 2025-02-25 16:10:59,124 | INFO     | transexitcode: 0
[2025-02-25 11:11:18] 2025-02-25 16:10:59,125 | INFO     | exeerrorcode: 0
[2025-02-25 11:11:18] 2025-02-25 16:10:59,125 | INFO     | exeerrordiag: 
[2025-02-25 11:11:18] 2025-02-25 16:10:59,125 | INFO     | exitcode: 0
[2025-02-25 11:11:18] 2025-02-25 16:10:59,125 | INFO     | exitmsg: OK
[2025-02-25 11:11:18] 2025-02-25 16:10:59,125 | INFO     | cpuconsumptiontime: 48230 s
[2025-02-25 11:11:18] 2025-02-25 16:10:59,125 | INFO     | nevents: 400
[2025-02-25 11:11:18] 2025-02-25 16:10:59,126 | INFO     | neventsw: 0
[2025-02-25 11:11:18] 2025-02-25 16:10:59,126 | INFO     | pid: 25687
[2025-02-25 11:11:18] 2025-02-25 16:10:59,126 | INFO     | pgrp: 25687
[2025-02-25 11:11:18] 2025-02-25 16:10:59,126 | INFO     | corecount: 12
[2025-02-25 11:11:18] 2025-02-25 16:10:59,126 | INFO     | event service: False
[2025-02-25 11:11:18] 2025-02-25 16:10:59,126 | INFO     | sizes: {0: 2376768, 1: 2376967, 6: 2377173, 12: 2377201, 5041: 2403310, 5042: 2412251, 5045: 2412435, 5052: 2412605}
[2025-02-25 11:11:18] 2025-02-25 16:10:59,127 | INFO     | --------------------------------------------------
[2025-02-25 11:11:18] 2025-02-25 16:10:59,127 | INFO     | 
[2025-02-25 11:11:18] 2025-02-25 16:10:59,127 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-25 11:11:18] 2025-02-25 16:10:59,151 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 11:11:18] 2025-02-25 16:10:59,151 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 11:11:18] 2025-02-25 16:10:59,151 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 11:11:18] 2025-02-25 16:10:59,151 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 11:11:18] 2025-02-25 16:10:59,152 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 11:11:18] 2025-02-25 16:10:59,152 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 11:11:18] 2025-02-25 16:10:59,152 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 11:11:18] 2025-02-25 16:10:59,152 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 11:11:18] 2025-02-25 16:10:59,152 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 11:11:18] 2025-02-25 16:10:59,152 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 11:11:18] 2025-02-25 16:10:59,153 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 11:11:18] 2025-02-25 16:10:59,153 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 11:11:18] 2025-02-25 16:10:59,153 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 11:11:18] 2025-02-25 16:10:59,153 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 11:11:18] 2025-02-25 16:10:59,153 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 11:11:18] 2025-02-25 16:10:59,153 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 11:11:18] 2025-02-25 16:10:59,154 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 11:11:18] 2025-02-25 16:10:59,154 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 11:11:18] 2025-02-25 16:10:59,154 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 11:11:18] 2025-02-25 16:10:59,154 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 11:11:18] 2025-02-25 16:10:59,154 | INFO     | job 6530433759 has completed (purged errors)
[2025-02-25 11:11:18] 2025-02-25 16:10:59,154 | INFO     | overall cleanup function is called
[2025-02-25 11:11:18] 2025-02-25 16:11:00,163 | INFO     | --- collectZombieJob: --- 10, [25687]
[2025-02-25 11:11:18] 2025-02-25 16:11:00,163 | INFO     | zombie collector waiting for pid 25687
[2025-02-25 11:11:18] 2025-02-25 16:11:00,163 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 11:11:18] 2025-02-25 16:11:00,163 | INFO     | collected zombie processes
[2025-02-25 11:11:18] 2025-02-25 16:11:00,163 | INFO     | will attempt to kill all subprocesses of pid=25687
[2025-02-25 11:11:18] 2025-02-25 16:11:00,226 | INFO     | process IDs to be killed: [25687] (in reverse order)
[2025-02-25 11:11:18] 2025-02-25 16:11:00,277 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 11:11:18] 2025-02-25 16:11:00,277 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 11:11:18] 2025-02-25 16:11:00,281 | INFO     | did not find any defunct processes belonging to 25687
[2025-02-25 11:11:18] 2025-02-25 16:11:00,284 | INFO     | did not find any defunct processes belonging to 25687
[2025-02-25 11:11:18] 2025-02-25 16:11:00,284 | INFO     | ready for new job
[2025-02-25 11:11:18] 2025-02-25 16:11:00,284 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 11:11:18] 2025-02-25 16:11:00,285 | INFO     | **************************************
[2025-02-25 11:11:18] 2025-02-25 16:11:00,285 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 11:11:18] 2025-02-25 16:11:00,285 | INFO     | **************************************
[2025-02-25 11:11:18] 2025-02-25 16:11:00,285 | INFO     | 
[2025-02-25 11:11:18] 2025-02-25 16:11:00,286 | INFO     | architecture information:
[2025-02-25 11:11:18] 2025-02-25 16:11:00,287 | INFO     | executing command: cat /etc/os-release
[2025-02-25 11:11:18] 2025-02-25 16:11:00,301 | INFO     | cat /etc/os-release:
[2025-02-25 11:11:18] NAME="CentOS Linux"
[2025-02-25 11:11:18] VERSION="7 (Core)"
[2025-02-25 11:11:18] ID="centos"
[2025-02-25 11:11:18] ID_LIKE="rhel fedora"
[2025-02-25 11:11:18] VERSION_ID="7"
[2025-02-25 11:11:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 11:11:18] ANSI_COLOR="0;31"
[2025-02-25 11:11:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 11:11:18] HOME_URL="https://www.centos.org/"
[2025-02-25 11:11:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 11:11:18] 
[2025-02-25 11:11:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 11:11:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 11:11:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 11:11:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 11:11:18] 
[2025-02-25 11:11:18] 2025-02-25 16:11:00,302 | INFO     | **************************************
[2025-02-25 11:11:18] 2025-02-25 16:11:00,805 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-25 11:11:18] 2025-02-25 16:11:00,824 | INFO     | sufficient remaining disk space (29365370880 B)
[2025-02-25 11:11:18] 2025-02-25 16:11:00,825 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 11:11:18] 2025-02-25 16:11:00,825 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 11:11:18] 2025-02-25 16:11:00,825 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 11:11:18] 2025-02-25 16:11:00,826 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-25 11:11:18] 2025-02-25 16:11:00,826 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 11:11:18] 2025-02-25 16:11:00,826 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 11:11:18] 2025-02-25 16:11:00,826 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 11:11:18] 2025-02-25 16:11:01,001 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-02-25 11:11:18] 2025-02-25 16:11:01,002 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-02-25 11:11:18] 2025-02-25 16:11:01,002 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 11:11:18] 2025-02-25 16:11:01,002 | INFO     | will abort loop
[2025-02-25 11:11:18] 2025-02-25 16:11:01,276 | INFO     | all data control threads have been joined
[2025-02-25 11:11:18] 2025-02-25 16:11:01,543 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 11:11:18] 2025-02-25 16:11:01,830 | INFO     | [job] retrieve thread has finished
[2025-02-25 11:11:18] 2025-02-25 16:11:01,831 | INFO     | [job] queue monitor thread has finished
[2025-02-25 11:11:18] 2025-02-25 16:11:02,008 | INFO     | [job] job monitor thread has finished
[2025-02-25 11:11:18] 2025-02-25 16:11:02,074 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 11:11:18] 2025-02-25 16:11:02,105 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 11:11:18] 2025-02-25 16:11:02,106 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 11:11:18] 2025-02-25 16:11:02,237 | INFO     | [payload] failed_post thread has finished
[2025-02-25 11:11:18] 2025-02-25 16:11:02,238 | INFO     | all payload control threads have been joined
[2025-02-25 11:11:18] 2025-02-25 16:11:02,282 | INFO     | [data] control thread has finished
[2025-02-25 11:11:18] 2025-02-25 16:11:02,506 | INFO     | all job control threads have been joined
[2025-02-25 11:11:18] 2025-02-25 16:11:02,592 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 11:11:18] 2025-02-25 16:11:02,626 | INFO     | [data] copytool_in thread has finished
[2025-02-25 11:11:18] 2025-02-25 16:11:03,048 | INFO     | [job] validate thread has finished
[2025-02-25 11:11:18] 2025-02-25 16:11:03,085 | INFO     | [payload] validate_post thread has finished
[2025-02-25 11:11:18] 2025-02-25 16:11:03,241 | INFO     | [payload] control thread has finished
[2025-02-25 11:11:18] 2025-02-25 16:11:03,512 | INFO     | [job] control thread has finished
[2025-02-25 11:11:18] 2025-02-25 16:11:03,549 | INFO     | [data] copytool_out thread has finished
[2025-02-25 11:11:18] 2025-02-25 16:11:06,598 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 11:11:18] 2025-02-25 16:11:11,714 | INFO     | job.realtimelogging is not enabled
[2025-02-25 11:11:18] 2025-02-25 16:11:12,720 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 11:11:18] 2025-02-25 16:11:12,788 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139934488553280)>', '<ExcThread(monitor, started 139933893244672)>']
[2025-02-25 11:11:18] 2025-02-25 16:11:12,888 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 11:11:18] 2025-02-25 16:11:12,888 | INFO     | [monitor] control thread has ended
[2025-02-25 11:11:18] 2025-02-25 16:11:17,809 | INFO     | all workflow threads have been joined
[2025-02-25 11:11:18] 2025-02-25 16:11:17,809 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 11:11:18] 2025-02-25 16:11:17,810 | INFO     | traces error code: 0
[2025-02-25 11:11:18] 2025-02-25 16:11:17,810 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 11:11:18] 2025-02-25 16:11:17,890 [wrapper] ==== pilot stdout END ====
[2025-02-25 11:11:18] 2025-02-25 16:11:17,894 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 11:11:18] 2025-02-25 16:11:17,897 [wrapper] pilotpid: 19327
[2025-02-25 11:11:18] 2025-02-25 16:11:17,901 [wrapper] Pilot exit status: 0
[2025-02-25 11:11:18] 2025-02-25 16:11:17,916 [wrapper] pandaids: 6530433759
[2025-02-25 11:11:18] 2025-02-25 16:11:17,958 [wrapper] cleanup supervisor_pilot  5972 19328
[2025-02-25 11:11:18] 2025-02-25 16:11:17,962 [wrapper] Test setup, not cleaning
[2025-02-25 11:11:18] 2025-02-25 16:11:17,969 [wrapper] apfmon messages muted
[2025-02-25 11:11:18] 2025-02-25 16:11:17,974 [wrapper] ==== wrapper stdout END ====
[2025-02-25 11:11:18] 2025-02-25 16:11:17,978 [wrapper] ==== wrapper stderr END ====
[2025-02-25 11:11:18]  *** Error codes and diagnostics ***
[2025-02-25 11:11:18]     "exeErrorCode": 0,
[2025-02-25 11:11:18]     "exeErrorDiag": "",
[2025-02-25 11:11:18]     "pilotErrorCode": 0,
[2025-02-25 11:11:18]     "pilotErrorDiag": "",
[2025-02-25 11:11:18]  *** Listing of results directory ***
[2025-02-25 11:11:18] total 431864
[2025-02-25 11:11:18] -rw-r--r-- 1 boincer umatlas    491065 Feb 25 09:02 pilot3.tar.gz
[2025-02-25 11:11:18] -rw-r--r-- 1 boincer umatlas      5118 Feb 25 09:29 queuedata.json
[2025-02-25 11:11:18] -rwx------ 1 boincer umatlas     35865 Feb 25 09:29 runpilot2-wrapper.sh
[2025-02-25 11:11:18] -rw-r--r-- 1 boincer umatlas       100 Feb 25 09:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 11:11:18] -rwxr-xr-x 1 boincer umatlas      7986 Feb 25 09:46 run_atlas
[2025-02-25 11:11:18] -rw-r--r-- 1 boincer umatlas       105 Feb 25 09:46 job.xml
[2025-02-25 11:11:18] -rw-r--r-- 2 boincer umatlas 247858532 Feb 25 09:46 EVNT.43401161._000013.pool.root.1
[2025-02-25 11:11:18] -rw-r--r-- 2 boincer umatlas    503546 Feb 25 09:46 input.tar.gz
[2025-02-25 11:11:18] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 09:46 start_atlas.sh
[2025-02-25 11:11:18] drwxrwx--x 2 boincer umatlas      4096 Feb 25 09:46 shared
[2025-02-25 11:11:18] -rw-r--r-- 1 boincer umatlas         0 Feb 25 09:46 boinc_lockfile
[2025-02-25 11:11:18] -rw-r--r-- 1 boincer umatlas      2539 Feb 25 09:46 pandaJob.out
[2025-02-25 11:11:18] -rw------- 1 boincer umatlas       424 Feb 25 09:46 setup.sh.local
[2025-02-25 11:11:18] -rw------- 1 boincer umatlas    988282 Feb 25 09:46 agis_schedconf.cvmfs.json
[2025-02-25 11:11:18] -rw------- 1 boincer umatlas   1577983 Feb 25 09:46 agis_ddmendpoints.agis.ALL.json
[2025-02-25 11:11:18] drwx------ 4 boincer umatlas      4096 Feb 25 09:46 pilot3
[2025-02-25 11:11:18] -rw-r--r-- 1 boincer umatlas      5868 Feb 25 11:09 init_data.xml
[2025-02-25 11:11:18] -rw------- 1 boincer umatlas 188896095 Feb 25 11:10 HITS.43401163._000311.pool.root.1
[2025-02-25 11:11:18] -rw------- 1 boincer umatlas        95 Feb 25 11:10 pilot_heartbeat.json
[2025-02-25 11:11:18] -rw------- 1 boincer umatlas      1043 Feb 25 11:10 memory_monitor_summary.json
[2025-02-25 11:11:18] -rw------- 1 boincer umatlas    364202 Feb 25 11:10 log.43401163._000311.job.log.tgz.1
[2025-02-25 11:11:18] -rw-r--r-- 1 boincer umatlas       530 Feb 25 11:10 boinc_task_state.xml
[2025-02-25 11:11:18] -rw------- 1 boincer umatlas      7760 Feb 25 11:10 heartbeat.json
[2025-02-25 11:11:18] -rw-r--r-- 1 boincer umatlas      8192 Feb 25 11:11 boinc_mmap_file
[2025-02-25 11:11:18] -rw-r--r-- 1 boincer umatlas        27 Feb 25 11:11 wrapper_checkpoint.txt
[2025-02-25 11:11:18] -rw------- 1 boincer umatlas      4596 Feb 25 11:11 pilotlog.txt
[2025-02-25 11:11:18] -rw------- 1 boincer umatlas    473525 Feb 25 11:11 log.43401163._000311.job.log.1
[2025-02-25 11:11:18] -rw------- 1 boincer umatlas       357 Feb 25 11:11 output.list
[2025-02-25 11:11:18] -rw-r--r-- 1 boincer umatlas       620 Feb 25 11:11 runtime_log
[2025-02-25 11:11:18] -rw------- 1 boincer umatlas    860160 Feb 25 11:11 result.tar.gz
[2025-02-25 11:11:18] -rw-r--r-- 1 boincer umatlas     11015 Feb 25 11:11 runtime_log.err
[2025-02-25 11:11:18] -rw------- 1 boincer umatlas       658 Feb 25 11:11 hySKDmN7A76nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmehwKDmGM9Erm.diag
[2025-02-25 11:11:18] -rw-r--r-- 1 boincer umatlas     21763 Feb 25 11:11 stderr.txt
[2025-02-25 11:11:18] HITS file was successfully produced:
[2025-02-25 11:11:18] -rw------- 1 boincer umatlas 188896095 Feb 25 11:10 shared/HITS.pool.root.1
[2025-02-25 11:11:18]  *** Contents of shared directory: ***
[2025-02-25 11:11:18] total 427876
[2025-02-25 11:11:18] -rw-r--r-- 2 boincer umatlas 247858532 Feb 25 09:46 ATLAS.root_0
[2025-02-25 11:11:18] -rw-r--r-- 2 boincer umatlas    503546 Feb 25 09:46 input.tar.gz
[2025-02-25 11:11:18] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 09:46 start_atlas.sh
[2025-02-25 11:11:18] -rw------- 1 boincer umatlas 188896095 Feb 25 11:10 HITS.pool.root.1
[2025-02-25 11:11:18] -rw------- 1 boincer umatlas    860160 Feb 25 11:11 result.tar.gz
11:11:20 (15711): run_atlas exited; CPU time 48159.662867
11:11:20 (15711): called boinc_finish(0)

</stderr_txt>
]]>

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