Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:24:57 (1769028): wrapper (7.7.26015): starting
10:24:57 (1769028): wrapper: running run_atlas (--nthreads 9)
[2025-02-25 10:24:57] Arguments: --nthreads 9
[2025-02-25 10:24:57] Threads: 9
[2025-02-25 10:24:57] Checking for CVMFS
[2025-02-25 10:24:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 10:24:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 10:24:58] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 10:24:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 10:24:58] 2.11.5.0 1544937 77976 282020 143043 0 64 19588689 37641217 16863 130560 0 1423050 98.193 6350756 34068 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-02-25 10:24:58] CVMFS is ok
[2025-02-25 10:24:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 10:24:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 10:24:58] Further information can be found at the LHC@home message board.
[2025-02-25 10:24:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 10:24:58] Checking for apptainer binary...
[2025-02-25 10:24:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 10:24:58] Running /usr/bin/apptainer --version
[2025-02-25 10:24:58] apptainer version 1.3.6-1.el9
[2025-02-25 10:24:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 10:24:58] c6-5-7-2.aglt2.org
[2025-02-25 10:24:58] apptainer works
[2025-02-25 10:24:58] Set ATHENA_PROC_NUMBER=9
[2025-02-25 10:24:58] Set ATHENA_CORE_NUMBER=9
[2025-02-25 10:24:58] Starting ATLAS job with PandaID=6530435762
[2025-02-25 10:24:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 11:33:10]  *** The last 200 lines of the pilot log: ***
[2025-02-25 11:33:10]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-02-25 11:33:10]  is_altstaged=None
[2025-02-25 11:33:10]  is_tar=False
[2025-02-25 11:33:10]  lfn=log.43401163._001027.job.log.tgz.1
[2025-02-25 11:33:10]  mtime=0
[2025-02-25 11:33:10]  protocol_id=None
[2025-02-25 11:33:10]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-25 11:33:10]  replicas=None
[2025-02-25 11:33:10]  scope=mc23_13p6TeV
[2025-02-25 11:33:10]  status=None
[2025-02-25 11:33:10]  status_code=0
[2025-02-25 11:33:10]  storage_token=
[2025-02-25 11:33:10]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6530435762/log.43401163._001027.job.log.tgz.1
[2025-02-25 11:33:10]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/16/72/log.43401163._001027.job.log.tgz.1
[2025-02-25 11:33:10]  workdir=None
[2025-02-25 11:33:10] ]
[2025-02-25 11:33:10] 2025-02-25 16:32:44,079 | INFO     | transferring file log.43401163._001027.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6530435762/log.43401163._001027.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-02-25 11:33:10] 2025-02-25 16:32:44,079 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6530435762/log.43401163._001027.job.log.tgz.1 /tmp/boinchome/slots/1/log.43401163._001027.job
[2025-02-25 11:33:10] 2025-02-25 16:32:44,098 | INFO     | adding to output.list: log.43401163._001027.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/16/72/log.43401163._001027.job.log.tg
[2025-02-25 11:33:10] 2025-02-25 16:32:44,099 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-25 11:33:10] 2025-02-25 16:32:44,099 | INFO     | summary of transferred files:
[2025-02-25 11:33:10] 2025-02-25 16:32:44,099 | INFO     |  -- lfn=log.43401163._001027.job.log.tgz.1, status_code=0, status=transferred
[2025-02-25 11:33:10] 2025-02-25 16:32:44,099 | INFO     | stage-out finished correctly
[2025-02-25 11:33:10] 2025-02-25 16:32:45,270 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-25 11:33:10] 2025-02-25 16:32:45,910 | INFO     | job 6530435762 has state=finished
[2025-02-25 11:33:10] 2025-02-25 16:32:45,911 | INFO     | preparing for final server update for job 6530435762 in state='finished'
[2025-02-25 11:33:10] 2025-02-25 16:32:45,912 | INFO     | this job has now completed (state=finished)
[2025-02-25 11:33:10] 2025-02-25 16:32:45,912 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-25 11:33:10] 2025-02-25 16:32:45,912 | INFO     | log transfer has been attempted: DONE
[2025-02-25 11:33:10] 2025-02-25 16:32:45,912 | INFO     | job 6530435762 has finished - writing final server update
[2025-02-25 11:33:10] 2025-02-25 16:32:45,913 | INFO     | total number of processed events: 400 (read)
[2025-02-25 11:33:10] 2025-02-25 16:32:45,931 | INFO     | executing command: lscpu
[2025-02-25 11:33:10] 2025-02-25 16:32:45,972 | INFO     | found 28 cores (14 cores per socket, 2 sockets)
[2025-02-25 11:33:10] 2025-02-25 16:32:45,993 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-25 11:33:10] 2025-02-25 16:32:46,070 | INFO     | PID=1772783 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-02-25 11:33:10] 2025-02-25 16:32:46,071 | INFO     | .. there are 23 such processes running
[2025-02-25 11:33:10] 2025-02-25 16:32:49,389 | INFO     | CPU arch script returned: x86-64-v4
[2025-02-25 11:33:10] 2025-02-25 16:32:49,390 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6530435762/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 11:33:10] 2025-02-25 16:32:49,390 | INFO     | extracted standard info from prmon json
[2025-02-25 11:33:10] 2025-02-25 16:32:49,391 | INFO     | extracted standard memory fields from prmon json
[2025-02-25 11:33:10] 2025-02-25 16:32:49,391 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-25 11:33:10] 2025-02-25 16:32:49,392 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 11:33:10] 2025-02-25 16:32:49,396 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 11:33:10] 2025-02-25 16:32:49,399 | INFO     | fitting pss+swap vs Time
[2025-02-25 11:33:10] 2025-02-25 16:32:49,400 | INFO     | model: linear, x: [1740497437.0, 1740497498.0, 1740497559.0, 1740497620.0, 1740497681.0, 1740497742.0, 1740497803.0, 1740497864.0, 1740497925.0, 1740497986.0, 1740
[2025-02-25 11:33:10] 2025-02-25 16:32:49,400 | INFO     | sum of square deviations: 66959395.0
[2025-02-25 11:33:10] 2025-02-25 16:32:49,400 | INFO     | sum of deviations: 8770761017.5
[2025-02-25 11:33:10] 2025-02-25 16:32:49,400 | INFO     | mean x: 1740499236.5
[2025-02-25 11:33:10] 2025-02-25 16:32:49,400 | INFO     | mean y: 2246119.216666667
[2025-02-25 11:33:10] 2025-02-25 16:32:49,401 | INFO     | -- intersect: -227979247060.0857
[2025-02-25 11:33:10] 2025-02-25 16:32:49,401 | INFO     | intersect: -227979247060.0857
[2025-02-25 11:33:10] 2025-02-25 16:32:49,401 | INFO     | chi2: 1.2238012835000223
[2025-02-25 11:33:10] 2025-02-25 16:32:49,401 | INFO     | -- intersect: -227979247060.0857
[2025-02-25 11:33:10] 2025-02-25 16:32:49,401 | INFO     | current memory leak: 130.99 B/s (using 60 data points, chi2=1.22)
[2025-02-25 11:33:10] 2025-02-25 16:32:49,402 | INFO     | ..............................
[2025-02-25 11:33:10] 2025-02-25 16:32:49,402 | INFO     | . Timing measurements:
[2025-02-25 11:33:10] 2025-02-25 16:32:49,402 | INFO     | . get job = 0 s
[2025-02-25 11:33:10] 2025-02-25 16:32:49,402 | INFO     | . initial setup = 2 s
[2025-02-25 11:33:10] 2025-02-25 16:32:49,402 | INFO     | . payload setup = 5 s
[2025-02-25 11:33:10] 2025-02-25 16:32:49,402 | INFO     | . stage-in = 0 s
[2025-02-25 11:33:10] 2025-02-25 16:32:49,402 | INFO     | . payload execution = 4031 s
[2025-02-25 11:33:10] 2025-02-25 16:32:49,402 | INFO     | . stage-out = 0 s
[2025-02-25 11:33:10] 2025-02-25 16:32:49,402 | INFO     | . log creation = 0 s
[2025-02-25 11:33:10] 2025-02-25 16:32:49,402 | INFO     | ..............................
[2025-02-25 11:33:10] 2025-02-25 16:32:49,477 | INFO     | 
[2025-02-25 11:33:10] 2025-02-25 16:32:49,478 | INFO     | job summary report
[2025-02-25 11:33:10] 2025-02-25 16:32:49,478 | INFO     | --------------------------------------------------
[2025-02-25 11:33:10] 2025-02-25 16:32:49,478 | INFO     | PanDA job id: 6530435762
[2025-02-25 11:33:10] 2025-02-25 16:32:49,478 | INFO     | task id: 43401163
[2025-02-25 11:33:10] 2025-02-25 16:32:49,478 | INFO     | errors: (none)
[2025-02-25 11:33:10] 2025-02-25 16:32:49,478 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 11:33:10] 2025-02-25 16:32:49,478 | INFO     | pilot state: finished 
[2025-02-25 11:33:10] 2025-02-25 16:32:49,478 | INFO     | transexitcode: 0
[2025-02-25 11:33:10] 2025-02-25 16:32:49,478 | INFO     | exeerrorcode: 0
[2025-02-25 11:33:10] 2025-02-25 16:32:49,479 | INFO     | exeerrordiag: 
[2025-02-25 11:33:10] 2025-02-25 16:32:49,479 | INFO     | exitcode: 0
[2025-02-25 11:33:10] 2025-02-25 16:32:49,479 | INFO     | exitmsg: OK
[2025-02-25 11:33:10] 2025-02-25 16:32:49,479 | INFO     | cpuconsumptiontime: 28496 s
[2025-02-25 11:33:10] 2025-02-25 16:32:49,479 | INFO     | nevents: 400
[2025-02-25 11:33:10] 2025-02-25 16:32:49,479 | INFO     | neventsw: 0
[2025-02-25 11:33:10] 2025-02-25 16:32:49,479 | INFO     | pid: 1779748
[2025-02-25 11:33:10] 2025-02-25 16:32:49,479 | INFO     | pgrp: 1779748
[2025-02-25 11:33:10] 2025-02-25 16:32:49,479 | INFO     | corecount: 9
[2025-02-25 11:33:10] 2025-02-25 16:32:49,479 | INFO     | event service: False
[2025-02-25 11:33:10] 2025-02-25 16:32:49,480 | INFO     | sizes: {0: 2376941, 4: 2377147, 11: 2377175, 4039: 2403019, 4041: 2411960, 4042: 2412016, 4046: 2412314}
[2025-02-25 11:33:10] 2025-02-25 16:32:49,480 | INFO     | --------------------------------------------------
[2025-02-25 11:33:10] 2025-02-25 16:32:49,480 | INFO     | 
[2025-02-25 11:33:10] 2025-02-25 16:32:49,480 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-02-25 11:33:10] 2025-02-25 16:32:49,501 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 11:33:10] 2025-02-25 16:32:49,501 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 11:33:10] 2025-02-25 16:32:49,501 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 11:33:10] 2025-02-25 16:32:49,501 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 11:33:10] 2025-02-25 16:32:49,502 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 11:33:10] 2025-02-25 16:32:49,502 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 11:33:10] 2025-02-25 16:32:49,502 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 11:33:10] 2025-02-25 16:32:49,502 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 11:33:10] 2025-02-25 16:32:49,502 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 11:33:10] 2025-02-25 16:32:49,502 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 11:33:10] 2025-02-25 16:32:49,502 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 11:33:10] 2025-02-25 16:32:49,502 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 11:33:10] 2025-02-25 16:32:49,502 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 11:33:10] 2025-02-25 16:32:49,502 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 11:33:10] 2025-02-25 16:32:49,502 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 11:33:10] 2025-02-25 16:32:49,502 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 11:33:10] 2025-02-25 16:32:49,502 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 11:33:10] 2025-02-25 16:32:49,502 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 11:33:10] 2025-02-25 16:32:49,502 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 11:33:10] 2025-02-25 16:32:49,503 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 11:33:10] 2025-02-25 16:32:49,503 | INFO     | job 6530435762 has completed (purged errors)
[2025-02-25 11:33:10] 2025-02-25 16:32:49,503 | INFO     | overall cleanup function is called
[2025-02-25 11:33:10] 2025-02-25 16:32:49,517 | WARNING  | process 1779748 can no longer be monitored (due to stat problems) - aborting
[2025-02-25 11:33:10] 2025-02-25 16:32:49,747 | INFO     | using path: /tmp/boinchome/slots/1/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 11:33:10] 2025-02-25 16:32:49,901 | INFO     | number of running child processes to parent process 1779748: 1
[2025-02-25 11:33:10] 2025-02-25 16:32:49,901 | INFO     | maximum number of monitored processes: 6
[2025-02-25 11:33:10] 2025-02-25 16:32:49,901 | INFO     | aborting job monitoring since job object (job id=6530435762) has expired
[2025-02-25 11:33:10] 2025-02-25 16:32:50,511 | INFO     | --- collectZombieJob: --- 10, [1779748]
[2025-02-25 11:33:10] 2025-02-25 16:32:50,511 | INFO     | zombie collector waiting for pid 1779748
[2025-02-25 11:33:10] 2025-02-25 16:32:50,511 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 11:33:10] 2025-02-25 16:32:50,511 | INFO     | collected zombie processes
[2025-02-25 11:33:10] 2025-02-25 16:32:50,511 | INFO     | will attempt to kill all subprocesses of pid=1779748
[2025-02-25 11:33:10] 2025-02-25 16:32:50,647 | INFO     | process IDs to be killed: [1779748] (in reverse order)
[2025-02-25 11:33:10] 2025-02-25 16:32:50,736 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 11:33:10] 2025-02-25 16:32:50,737 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 11:33:10] 2025-02-25 16:32:50,747 | INFO     | did not find any defunct processes belonging to 1779748
[2025-02-25 11:33:10] 2025-02-25 16:32:50,757 | INFO     | did not find any defunct processes belonging to 1779748
[2025-02-25 11:33:10] 2025-02-25 16:32:50,757 | INFO     | ready for new job
[2025-02-25 11:33:10] 2025-02-25 16:32:50,757 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 11:33:10] 2025-02-25 16:32:50,759 | INFO     | **************************************
[2025-02-25 11:33:10] 2025-02-25 16:32:50,759 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 11:33:10] 2025-02-25 16:32:50,760 | INFO     | **************************************
[2025-02-25 11:33:10] 2025-02-25 16:32:50,760 | INFO     | 
[2025-02-25 11:33:10] 2025-02-25 16:32:50,775 | INFO     | architecture information:
[2025-02-25 11:33:10] 2025-02-25 16:32:50,775 | INFO     | executing command: cat /etc/os-release
[2025-02-25 11:33:10] 2025-02-25 16:32:50,788 | INFO     | cat /etc/os-release:
[2025-02-25 11:33:10] NAME="CentOS Linux"
[2025-02-25 11:33:10] VERSION="7 (Core)"
[2025-02-25 11:33:10] ID="centos"
[2025-02-25 11:33:10] ID_LIKE="rhel fedora"
[2025-02-25 11:33:10] VERSION_ID="7"
[2025-02-25 11:33:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 11:33:10] ANSI_COLOR="0;31"
[2025-02-25 11:33:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 11:33:10] HOME_URL="https://www.centos.org/"
[2025-02-25 11:33:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 11:33:10] 
[2025-02-25 11:33:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 11:33:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 11:33:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 11:33:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 11:33:10] 
[2025-02-25 11:33:10] 2025-02-25 16:32:50,789 | INFO     | **************************************
[2025-02-25 11:33:10] 2025-02-25 16:32:51,292 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-02-25 11:33:10] 2025-02-25 16:32:51,302 | INFO     | sufficient remaining disk space (75001495552 B)
[2025-02-25 11:33:10] 2025-02-25 16:32:51,303 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 11:33:10] 2025-02-25 16:32:51,303 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 11:33:10] 2025-02-25 16:32:51,303 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 11:33:10] 2025-02-25 16:32:51,303 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 11:33:10] 2025-02-25 16:32:51,303 | INFO     | aborting loop
[2025-02-25 11:33:10] 2025-02-25 16:32:51,355 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 11:33:10] 2025-02-25 16:32:51,515 | INFO     | all data control threads have been joined
[2025-02-25 11:33:10] 2025-02-25 16:32:52,077 | INFO     | all payload control threads have been joined
[2025-02-25 11:33:10] 2025-02-25 16:32:52,090 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 11:33:10] 2025-02-25 16:32:52,090 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 11:33:10] 2025-02-25 16:32:52,090 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 11:33:10] 2025-02-25 16:32:52,236 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 11:33:10] 2025-02-25 16:32:52,308 | INFO     | [job] retrieve thread has finished
[2025-02-25 11:33:10] 2025-02-25 16:32:52,308 | INFO     | [job] job monitor thread has finished
[2025-02-25 11:33:10] 2025-02-25 16:32:52,309 | INFO     | [job] queue monitor thread has finished
[2025-02-25 11:33:10] 2025-02-25 16:32:52,520 | INFO     | [data] control thread has finished
[2025-02-25 11:33:10] 2025-02-25 16:32:52,899 | INFO     | [payload] validate_post thread has finished
[2025-02-25 11:33:10] 2025-02-25 16:32:52,943 | INFO     | all job control threads have been joined
[2025-02-25 11:33:10] 2025-02-25 16:32:53,063 | INFO     | [data] copytool_in thread has finished
[2025-02-25 11:33:10] 2025-02-25 16:32:53,082 | INFO     | [payload] control thread has finished
[2025-02-25 11:33:10] 2025-02-25 16:32:53,203 | INFO     | [job] validate thread has finished
[2025-02-25 11:33:10] 2025-02-25 16:32:53,275 | INFO     | [payload] failed_post thread has finished
[2025-02-25 11:33:10] 2025-02-25 16:32:53,383 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 11:33:10] 2025-02-25 16:32:53,518 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 11:33:10] 2025-02-25 16:32:53,746 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 11:33:10] 2025-02-25 16:32:53,948 | INFO     | [job] control thread has finished
[2025-02-25 11:33:10] 2025-02-25 16:32:54,243 | INFO     | [data] copytool_out thread has finished
[2025-02-25 11:33:10] 2025-02-25 16:32:55,361 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 11:33:10] 2025-02-25 16:33:02,301 | INFO     | job.realtimelogging is not enabled
[2025-02-25 11:33:10] 2025-02-25 16:33:03,306 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 11:33:10] 2025-02-25 16:33:04,787 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140525561341760)>', '<ExcThread(monitor, started 140524937795328)>']
[2025-02-25 11:33:10] 2025-02-25 16:33:05,155 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 11:33:10] 2025-02-25 16:33:05,155 | INFO     | [monitor] control thread has ended
[2025-02-25 11:33:10] 2025-02-25 16:33:09,812 | INFO     | all workflow threads have been joined
[2025-02-25 11:33:10] 2025-02-25 16:33:09,813 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 11:33:10] 2025-02-25 16:33:09,813 | INFO     | traces error code: 0
[2025-02-25 11:33:10] 2025-02-25 16:33:09,813 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 11:33:10] 2025-02-25 16:33:10,002 [wrapper] ==== pilot stdout END ====
[2025-02-25 11:33:10] 2025-02-25 16:33:10,004 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 11:33:10] 2025-02-25 16:33:10,006 [wrapper] pilotpid: 1772783
[2025-02-25 11:33:10] 2025-02-25 16:33:10,008 [wrapper] Pilot exit status: 0
[2025-02-25 11:33:10] 2025-02-25 16:33:10,016 [wrapper] pandaids: 6530435762
[2025-02-25 11:33:10] 2025-02-25 16:33:10,085 [wrapper] cleanup supervisor_pilot 2209820 1772784
[2025-02-25 11:33:10] 2025-02-25 16:33:10,090 [wrapper] Test setup, not cleaning
[2025-02-25 11:33:10] 2025-02-25 16:33:10,096 [wrapper] apfmon messages muted
[2025-02-25 11:33:10] 2025-02-25 16:33:10,098 [wrapper] ==== wrapper stdout END ====
[2025-02-25 11:33:10] 2025-02-25 16:33:10,100 [wrapper] ==== wrapper stderr END ====
[2025-02-25 11:33:10]  *** Error codes and diagnostics ***
[2025-02-25 11:33:10]     "exeErrorCode": 0,
[2025-02-25 11:33:10]     "exeErrorDiag": "",
[2025-02-25 11:33:10]     "pilotErrorCode": 0,
[2025-02-25 11:33:10]     "pilotErrorDiag": "",
[2025-02-25 11:33:10]  *** Listing of results directory ***
[2025-02-25 11:33:10] total 430516
[2025-02-25 11:33:10] -rw-r--r--. 1 boincer umatlas    491065 Feb 25 09:02 pilot3.tar.gz
[2025-02-25 11:33:10] -rw-r--r--. 1 boincer umatlas      5118 Feb 25 09:26 queuedata.json
[2025-02-25 11:33:10] -rwx------. 1 boincer umatlas     35865 Feb 25 09:27 runpilot2-wrapper.sh
[2025-02-25 11:33:10] -rw-r--r--. 1 boincer umatlas       100 Feb 25 10:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 11:33:10] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 25 10:24 run_atlas
[2025-02-25 11:33:10] -rw-r--r--. 1 boincer umatlas       105 Feb 25 10:24 job.xml
[2025-02-25 11:33:10] -rw-r--r--. 2 boincer umatlas 248744315 Feb 25 10:24 EVNT.43401161._000042.pool.root.1
[2025-02-25 11:33:10] -rw-r--r--. 2 boincer umatlas     17569 Feb 25 10:24 start_atlas.sh
[2025-02-25 11:33:10] drwxrwx--x. 2 boincer umatlas      4096 Feb 25 10:24 shared
[2025-02-25 11:33:10] -rw-r--r--. 2 boincer umatlas    503547 Feb 25 10:24 input.tar.gz
[2025-02-25 11:33:10] -rw-r--r--. 1 boincer umatlas         0 Feb 25 10:24 boinc_lockfile
[2025-02-25 11:33:10] -rw-r--r--. 1 boincer umatlas      2540 Feb 25 10:24 pandaJob.out
[2025-02-25 11:33:10] -rw-------. 1 boincer umatlas       467 Feb 25 10:24 setup.sh.local
[2025-02-25 11:33:10] -rw-------. 1 boincer umatlas    988282 Feb 25 10:25 agis_schedconf.cvmfs.json
[2025-02-25 11:33:10] -rw-------. 1 boincer umatlas   1577983 Feb 25 10:25 agis_ddmendpoints.agis.ALL.json
[2025-02-25 11:33:10] drwx------. 4 boincer umatlas      4096 Feb 25 10:25 pilot3
[2025-02-25 11:33:10] -rw-r--r--. 1 boincer umatlas      6840 Feb 25 11:27 init_data.xml
[2025-02-25 11:33:10] -rw-------. 1 boincer umatlas 186874597 Feb 25 11:32 HITS.43401163._001027.pool.root.1
[2025-02-25 11:33:10] -rw-r--r--. 1 boincer umatlas       529 Feb 25 11:32 boinc_task_state.xml
[2025-02-25 11:33:10] -rw-------. 1 boincer umatlas        95 Feb 25 11:32 pilot_heartbeat.json
[2025-02-25 11:33:10] -rw-------. 1 boincer umatlas      1037 Feb 25 11:32 memory_monitor_summary.json
[2025-02-25 11:33:10] -rw-------. 1 boincer umatlas    302480 Feb 25 11:32 log.43401163._001027.job.log.tgz.1
[2025-02-25 11:33:10] -rw-------. 1 boincer umatlas      7727 Feb 25 11:32 heartbeat.json
[2025-02-25 11:33:10] -rw-r--r--. 1 boincer umatlas        27 Feb 25 11:33 wrapper_checkpoint.txt
[2025-02-25 11:33:10] -rw-r--r--. 1 boincer umatlas      8192 Feb 25 11:33 boinc_mmap_file
[2025-02-25 11:33:10] -rw-------. 1 boincer umatlas      4287 Feb 25 11:33 pilotlog.txt
[2025-02-25 11:33:10] -rw-------. 1 boincer umatlas    412509 Feb 25 11:33 log.43401163._001027.job.log.1
[2025-02-25 11:33:10] -rw-------. 1 boincer umatlas       357 Feb 25 11:33 output.list
[2025-02-25 11:33:10] -rw-r--r--. 1 boincer umatlas       620 Feb 25 11:33 runtime_log
[2025-02-25 11:33:10] -rw-------. 1 boincer umatlas    737280 Feb 25 11:33 result.tar.gz
[2025-02-25 11:33:10] -rw-r--r--. 1 boincer umatlas     11418 Feb 25 11:33 runtime_log.err
[2025-02-25 11:33:10] -rw-------. 1 boincer umatlas       651 Feb 25 11:33 ki9MDmF5A76nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmegwKDm42AkOn.diag
[2025-02-25 11:33:10] -rw-r--r--. 1 boincer umatlas     21537 Feb 25 11:33 stderr.txt
[2025-02-25 11:33:10] HITS file was successfully produced:
[2025-02-25 11:33:10] -rw-------. 1 boincer umatlas 186874597 Feb 25 11:32 shared/HITS.pool.root.1
[2025-02-25 11:33:10]  *** Contents of shared directory: ***
[2025-02-25 11:33:10] total 426648
[2025-02-25 11:33:10] -rw-r--r--. 2 boincer umatlas 248744315 Feb 25 10:24 ATLAS.root_0
[2025-02-25 11:33:10] -rw-r--r--. 2 boincer umatlas     17569 Feb 25 10:24 start_atlas.sh
[2025-02-25 11:33:10] -rw-r--r--. 2 boincer umatlas    503547 Feb 25 10:24 input.tar.gz
[2025-02-25 11:33:10] -rw-------. 1 boincer umatlas 186874597 Feb 25 11:32 HITS.pool.root.1
[2025-02-25 11:33:10] -rw-------. 1 boincer umatlas    737280 Feb 25 11:33 result.tar.gz
11:33:11 (1769028): run_atlas exited; CPU time 28479.271231
11:33:11 (1769028): called boinc_finish(0)

</stderr_txt>
]]>

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