Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:47:27 (3102976): wrapper (7.7.26015): starting
09:47:27 (3102976): wrapper: running run_atlas (--nthreads 8)
[2025-02-25 09:47:27] Arguments: --nthreads 8
[2025-02-25 09:47:27] Threads: 8
[2025-02-25 09:47:27] Checking for CVMFS
[2025-02-25 09:47:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 09:47:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 09:47:27] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 09:47:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 09:47:27] 2.11.5.0 4179490 39341 307784 143041 2 213 21762654 37641216 17678 130560 0 2314100 98.374 7815610 37570 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-02-25 09:47:27] CVMFS is ok
[2025-02-25 09:47:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 09:47:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 09:47:27] Further information can be found at the LHC@home message board.
[2025-02-25 09:47:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 09:47:27] Checking for apptainer binary...
[2025-02-25 09:47:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 09:47:27] Running /usr/bin/apptainer --version
[2025-02-25 09:47:27] apptainer version 1.3.6-1.el9
[2025-02-25 09:47:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 09:47:28] c6-4-5-3.aglt2.org
[2025-02-25 09:47:28] apptainer works
[2025-02-25 09:47:28] Set ATHENA_PROC_NUMBER=8
[2025-02-25 09:47:28] Set ATHENA_CORE_NUMBER=8
[2025-02-25 09:47:28] Starting ATLAS job with PandaID=6530424851
[2025-02-25 09:47:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 11:22:58]  *** The last 200 lines of the pilot log: ***
[2025-02-25 11:22:58]  protocol_id=None
[2025-02-25 11:22:58]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-25 11:22:58]  replicas=None
[2025-02-25 11:22:58]  scope=mc23_13p6TeV
[2025-02-25 11:22:58]  status=None
[2025-02-25 11:22:58]  status_code=0
[2025-02-25 11:22:58]  storage_token=
[2025-02-25 11:22:58]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6530424851/log.43401137._001442.job.log.tgz.1
[2025-02-25 11:22:58]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c6/87/log.43401137._001442.job.log.tgz.1
[2025-02-25 11:22:58]  workdir=None
[2025-02-25 11:22:58] ]
[2025-02-25 11:22:58] 2025-02-25 16:22:40,471 | INFO     | transferring file log.43401137._001442.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6530424851/log.43401137._001442.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-02-25 11:22:58] 2025-02-25 16:22:40,471 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6530424851/log.43401137._001442.job.log.tgz.1 /tmp/boinchome/slots/1/log.43401137._001442.job
[2025-02-25 11:22:58] 2025-02-25 16:22:40,492 | INFO     | adding to output.list: log.43401137._001442.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c6/87/log.43401137._001442.job.log.tg
[2025-02-25 11:22:58] 2025-02-25 16:22:40,493 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-25 11:22:58] 2025-02-25 16:22:40,493 | INFO     | summary of transferred files:
[2025-02-25 11:22:58] 2025-02-25 16:22:40,493 | INFO     |  -- lfn=log.43401137._001442.job.log.tgz.1, status_code=0, status=transferred
[2025-02-25 11:22:58] 2025-02-25 16:22:40,494 | INFO     | stage-out finished correctly
[2025-02-25 11:22:58] 2025-02-25 16:22:40,770 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-25 11:22:58] 2025-02-25 16:22:41,049 | INFO     | job 6530424851 has state=finished
[2025-02-25 11:22:58] 2025-02-25 16:22:41,049 | INFO     | preparing for final server update for job 6530424851 in state='finished'
[2025-02-25 11:22:58] 2025-02-25 16:22:41,050 | INFO     | this job has now completed (state=finished)
[2025-02-25 11:22:58] 2025-02-25 16:22:41,050 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-25 11:22:58] 2025-02-25 16:22:41,050 | INFO     | log transfer has been attempted: DONE
[2025-02-25 11:22:58] 2025-02-25 16:22:41,050 | INFO     | job 6530424851 has finished - writing final server update
[2025-02-25 11:22:58] 2025-02-25 16:22:41,050 | INFO     | total number of processed events: 400 (read)
[2025-02-25 11:22:58] 2025-02-25 16:22:41,066 | INFO     | executing command: lscpu
[2025-02-25 11:22:58] 2025-02-25 16:22:41,116 | INFO     | found 32 cores (16 cores per socket, 2 sockets)
[2025-02-25 11:22:58] 2025-02-25 16:22:41,149 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-25 11:22:58] 2025-02-25 16:22:44,128 | INFO     | CPU arch script returned: x86-64-v4
[2025-02-25 11:22:58] 2025-02-25 16:22:44,129 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6530424851/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 11:22:58] 2025-02-25 16:22:44,136 | INFO     | extracted standard info from prmon json
[2025-02-25 11:22:58] 2025-02-25 16:22:44,136 | INFO     | extracted standard memory fields from prmon json
[2025-02-25 11:22:58] 2025-02-25 16:22:44,136 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-25 11:22:58] 2025-02-25 16:22:44,137 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 11:22:58] 2025-02-25 16:22:44,137 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 11:22:58] 2025-02-25 16:22:44,139 | INFO     | fitting pss+swap vs Time
[2025-02-25 11:22:58] 2025-02-25 16:22:44,140 | INFO     | model: linear, x: [1740495189.0, 1740495250.0, 1740495311.0, 1740495372.0, 1740495433.0, 1740495494.0, 1740495555.0, 1740495616.0, 1740495677.0, 1740495738.0, 1740
[2025-02-25 11:22:58] 2025-02-25 16:22:44,140 | INFO     | sum of square deviations: 197203697.5
[2025-02-25 11:22:58] 2025-02-25 16:22:44,141 | INFO     | sum of deviations: 21360946053.5
[2025-02-25 11:22:58] 2025-02-25 16:22:44,141 | INFO     | mean x: 1740497781.5
[2025-02-25 11:22:58] 2025-02-25 16:22:44,141 | INFO     | mean y: 2241870.895348837
[2025-02-25 11:22:58] 2025-02-25 16:22:44,141 | INFO     | -- intersect: -188527079273.59247
[2025-02-25 11:22:58] 2025-02-25 16:22:44,141 | INFO     | intersect: -188527079273.59247
[2025-02-25 11:22:58] 2025-02-25 16:22:44,141 | INFO     | chi2: 1.8273795705511098
[2025-02-25 11:22:58] 2025-02-25 16:22:44,141 | INFO     | -- intersect: -188527079273.59247
[2025-02-25 11:22:58] 2025-02-25 16:22:44,141 | INFO     | current memory leak: 108.32 B/s (using 86 data points, chi2=1.83)
[2025-02-25 11:22:58] 2025-02-25 16:22:44,142 | INFO     | ..............................
[2025-02-25 11:22:58] 2025-02-25 16:22:44,142 | INFO     | . Timing measurements:
[2025-02-25 11:22:58] 2025-02-25 16:22:44,142 | INFO     | . get job = 0 s
[2025-02-25 11:22:58] 2025-02-25 16:22:44,142 | INFO     | . initial setup = 2 s
[2025-02-25 11:22:58] 2025-02-25 16:22:44,142 | INFO     | . payload setup = 5 s
[2025-02-25 11:22:58] 2025-02-25 16:22:44,142 | INFO     | . stage-in = 0 s
[2025-02-25 11:22:58] 2025-02-25 16:22:44,142 | INFO     | . payload execution = 5676 s
[2025-02-25 11:22:58] 2025-02-25 16:22:44,142 | INFO     | . stage-out = 0 s
[2025-02-25 11:22:58] 2025-02-25 16:22:44,142 | INFO     | . log creation = 0 s
[2025-02-25 11:22:58] 2025-02-25 16:22:44,142 | INFO     | ..............................
[2025-02-25 11:22:58] 2025-02-25 16:22:44,232 | INFO     | 
[2025-02-25 11:22:58] 2025-02-25 16:22:44,232 | INFO     | job summary report
[2025-02-25 11:22:58] 2025-02-25 16:22:44,232 | INFO     | --------------------------------------------------
[2025-02-25 11:22:58] 2025-02-25 16:22:44,232 | INFO     | PanDA job id: 6530424851
[2025-02-25 11:22:58] 2025-02-25 16:22:44,232 | INFO     | task id: 43401137
[2025-02-25 11:22:58] 2025-02-25 16:22:44,232 | INFO     | errors: (none)
[2025-02-25 11:22:58] 2025-02-25 16:22:44,232 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 11:22:58] 2025-02-25 16:22:44,232 | INFO     | pilot state: finished 
[2025-02-25 11:22:58] 2025-02-25 16:22:44,232 | INFO     | transexitcode: 0
[2025-02-25 11:22:58] 2025-02-25 16:22:44,233 | INFO     | exeerrorcode: 0
[2025-02-25 11:22:58] 2025-02-25 16:22:44,233 | INFO     | exeerrordiag: 
[2025-02-25 11:22:58] 2025-02-25 16:22:44,233 | INFO     | exitcode: 0
[2025-02-25 11:22:58] 2025-02-25 16:22:44,233 | INFO     | exitmsg: OK
[2025-02-25 11:22:58] 2025-02-25 16:22:44,233 | INFO     | cpuconsumptiontime: 36422 s
[2025-02-25 11:22:58] 2025-02-25 16:22:44,233 | INFO     | nevents: 400
[2025-02-25 11:22:58] 2025-02-25 16:22:44,233 | INFO     | neventsw: 0
[2025-02-25 11:22:58] 2025-02-25 16:22:44,233 | INFO     | pid: 3118305
[2025-02-25 11:22:58] 2025-02-25 16:22:44,233 | INFO     | pgrp: 3118305
[2025-02-25 11:22:58] 2025-02-25 16:22:44,233 | INFO     | corecount: 8
[2025-02-25 11:22:58] 2025-02-25 16:22:44,233 | INFO     | event service: False
[2025-02-25 11:22:58] 2025-02-25 16:22:44,233 | INFO     | sizes: {0: 2376960, 4: 2377166, 11: 2377194, 5685: 2403823, 5688: 2412820, 5691: 2412934}
[2025-02-25 11:22:58] 2025-02-25 16:22:44,233 | INFO     | --------------------------------------------------
[2025-02-25 11:22:58] 2025-02-25 16:22:44,233 | INFO     | 
[2025-02-25 11:22:58] 2025-02-25 16:22:44,233 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-02-25 11:22:58] 2025-02-25 16:22:44,248 | WARNING  | process 3118305 can no longer be monitored (due to stat problems) - aborting
[2025-02-25 11:22:58] 2025-02-25 16:22:44,249 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6530424851/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 11:22:58] 2025-02-25 16:22:44,250 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6530424851/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 11:22:58] 2025-02-25 16:22:44,251 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3379511 B
[2025-02-25 11:22:58] 2025-02-25 16:22:44,251 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16257 B
[2025-02-25 11:22:58] 2025-02-25 16:22:44,251 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-02-25 11:22:58] 2025-02-25 16:22:44,258 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 11:22:58] 2025-02-25 16:22:44,258 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 11:22:58] 2025-02-25 16:22:44,258 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 11:22:58] 2025-02-25 16:22:44,259 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 11:22:58] 2025-02-25 16:22:44,259 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 11:22:58] 2025-02-25 16:22:44,259 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 11:22:58] 2025-02-25 16:22:44,259 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 11:22:58] 2025-02-25 16:22:44,259 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 11:22:58] 2025-02-25 16:22:44,259 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 11:22:58] 2025-02-25 16:22:44,259 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 11:22:58] 2025-02-25 16:22:44,259 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 11:22:58] 2025-02-25 16:22:44,259 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 11:22:58] 2025-02-25 16:22:44,260 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 11:22:58] 2025-02-25 16:22:44,260 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 11:22:58] 2025-02-25 16:22:44,260 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 11:22:58] 2025-02-25 16:22:44,260 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 11:22:58] 2025-02-25 16:22:44,260 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 11:22:58] 2025-02-25 16:22:44,260 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 11:22:58] 2025-02-25 16:22:44,260 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 11:22:58] 2025-02-25 16:22:44,260 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 11:22:58] 2025-02-25 16:22:44,261 | INFO     | job 6530424851 has completed (purged errors)
[2025-02-25 11:22:58] 2025-02-25 16:22:44,261 | INFO     | overall cleanup function is called
[2025-02-25 11:22:58] 2025-02-25 16:22:44,267 | INFO     | sufficient remaining disk space (74573676544 B)
[2025-02-25 11:22:58] 2025-02-25 16:22:44,267 | WARNING  | skipping size check of workdir since it has not been created yet
[2025-02-25 11:22:58] 2025-02-25 16:22:44,267 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/1/PanDA_Pilot-6530424851/HITS.43401137._001442.pool.root.1 since it does not exist
[2025-02-25 11:22:58] 2025-02-25 16:22:44,357 | INFO     | number of running child processes to parent process 3118305: 1
[2025-02-25 11:22:58] 2025-02-25 16:22:44,358 | INFO     | maximum number of monitored processes: 6
[2025-02-25 11:22:58] 2025-02-25 16:22:44,358 | INFO     | aborting job monitoring since job object (job id=6530424851) has expired
[2025-02-25 11:22:58] 2025-02-25 16:22:45,268 | INFO     | --- collectZombieJob: --- 10, [3118305]
[2025-02-25 11:22:58] 2025-02-25 16:22:45,269 | INFO     | zombie collector waiting for pid 3118305
[2025-02-25 11:22:58] 2025-02-25 16:22:45,269 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 11:22:58] 2025-02-25 16:22:45,269 | INFO     | collected zombie processes
[2025-02-25 11:22:58] 2025-02-25 16:22:45,269 | INFO     | will attempt to kill all subprocesses of pid=3118305
[2025-02-25 11:22:58] 2025-02-25 16:22:45,382 | INFO     | process IDs to be killed: [3118305] (in reverse order)
[2025-02-25 11:22:58] 2025-02-25 16:22:45,459 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 11:22:58] 2025-02-25 16:22:45,459 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 11:22:58] 2025-02-25 16:22:45,469 | INFO     | did not find any defunct processes belonging to 3118305
[2025-02-25 11:22:58] 2025-02-25 16:22:45,480 | INFO     | did not find any defunct processes belonging to 3118305
[2025-02-25 11:22:58] 2025-02-25 16:22:45,480 | INFO     | ready for new job
[2025-02-25 11:22:58] 2025-02-25 16:22:45,480 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 11:22:58] 2025-02-25 16:22:45,482 | INFO     | **************************************
[2025-02-25 11:22:58] 2025-02-25 16:22:45,482 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 11:22:58] 2025-02-25 16:22:45,482 | INFO     | **************************************
[2025-02-25 11:22:58] 2025-02-25 16:22:45,482 | INFO     | 
[2025-02-25 11:22:58] 2025-02-25 16:22:45,497 | INFO     | architecture information:
[2025-02-25 11:22:58] 2025-02-25 16:22:45,497 | INFO     | executing command: cat /etc/os-release
[2025-02-25 11:22:58] 2025-02-25 16:22:45,513 | INFO     | cat /etc/os-release:
[2025-02-25 11:22:58] NAME="CentOS Linux"
[2025-02-25 11:22:58] VERSION="7 (Core)"
[2025-02-25 11:22:58] ID="centos"
[2025-02-25 11:22:58] ID_LIKE="rhel fedora"
[2025-02-25 11:22:58] VERSION_ID="7"
[2025-02-25 11:22:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 11:22:58] ANSI_COLOR="0;31"
[2025-02-25 11:22:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 11:22:58] HOME_URL="https://www.centos.org/"
[2025-02-25 11:22:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 11:22:58] 
[2025-02-25 11:22:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 11:22:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 11:22:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 11:22:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 11:22:58] 
[2025-02-25 11:22:58] 2025-02-25 16:22:45,513 | INFO     | **************************************
[2025-02-25 11:22:58] 2025-02-25 16:22:46,014 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-02-25 11:22:58] 2025-02-25 16:22:46,030 | INFO     | sufficient remaining disk space (74573676544 B)
[2025-02-25 11:22:58] 2025-02-25 16:22:46,031 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 11:22:58] 2025-02-25 16:22:46,031 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 11:22:58] 2025-02-25 16:22:46,031 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-25 11:22:58] 2025-02-25 16:22:46,032 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 11:22:58] 2025-02-25 16:22:46,032 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 11:22:58] 2025-02-25 16:22:46,032 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 11:22:58] 2025-02-25 16:22:46,033 | INFO     | aborting loop
[2025-02-25 11:22:58] 2025-02-25 16:22:46,033 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 11:22:58] 2025-02-25 16:22:46,033 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 11:22:58] 2025-02-25 16:22:46,083 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 11:22:58] 2025-02-25 16:22:46,583 | INFO     | all job control threads have been joined
[2025-02-25 11:22:58] 2025-02-25 16:22:46,674 | INFO     | all data control threads have been joined
[2025-02-25 11:22:58] 2025-02-25 16:22:46,765 | INFO     | all payload control threads have been joined
[2025-02-25 11:22:58] 2025-02-25 16:22:46,860 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 11:22:58] 2025-02-25 16:22:47,035 | INFO     | [job] queue monitor thread has finished
[2025-02-25 11:22:58] 2025-02-25 16:22:47,035 | INFO     | [job] retrieve thread has finished
[2025-02-25 11:22:58] 2025-02-25 16:22:47,038 | INFO     | [job] job monitor thread has finished
[2025-02-25 11:22:58] 2025-02-25 16:22:47,050 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 11:22:58] 2025-02-25 16:22:47,309 | INFO     | [payload] validate_post thread has finished
[2025-02-25 11:22:58] 2025-02-25 16:22:47,552 | INFO     | [payload] failed_post thread has finished
[2025-02-25 11:22:58] 2025-02-25 16:22:47,589 | INFO     | [job] control thread has finished
[2025-02-25 11:22:58] 2025-02-25 16:22:47,680 | INFO     | [data] control thread has finished
[2025-02-25 11:22:58] 2025-02-25 16:22:47,766 | INFO     | [payload] control thread has finished
[2025-02-25 11:22:58] 2025-02-25 16:22:47,827 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 11:22:58] 2025-02-25 16:22:48,088 | INFO     | [data] copytool_out thread has finished
[2025-02-25 11:22:58] 2025-02-25 16:22:48,203 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 11:22:58] 2025-02-25 16:22:48,272 | INFO     | [data] copytool_in thread has finished
[2025-02-25 11:22:58] 2025-02-25 16:22:48,273 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 11:22:58] 2025-02-25 16:22:48,433 | INFO     | [job] validate thread has finished
[2025-02-25 11:22:58] 2025-02-25 16:22:50,865 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 11:22:58] 2025-02-25 16:22:52,792 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140608977135424)>', '<ExcThread(monitor, started 140608496723712)>']
[2025-02-25 11:22:58] 2025-02-25 16:22:53,067 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 11:22:58] 2025-02-25 16:22:53,067 | INFO     | [monitor] control thread has ended
[2025-02-25 11:22:58] 2025-02-25 16:22:57,816 | INFO     | all workflow threads have been joined
[2025-02-25 11:22:58] 2025-02-25 16:22:57,817 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 11:22:58] 2025-02-25 16:22:57,817 | INFO     | traces error code: 0
[2025-02-25 11:22:58] 2025-02-25 16:22:57,817 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 11:22:58] 2025-02-25 16:22:58,000 [wrapper] ==== pilot stdout END ====
[2025-02-25 11:22:58] 2025-02-25 16:22:58,003 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 11:22:58] 2025-02-25 16:22:58,005 [wrapper] pilotpid: 3108479
[2025-02-25 11:22:58] 2025-02-25 16:22:58,007 [wrapper] Pilot exit status: 0
[2025-02-25 11:22:58] 2025-02-25 16:22:58,028 [wrapper] pandaids: 6530424851
[2025-02-25 11:22:58] 2025-02-25 16:22:58,084 [wrapper] cleanup supervisor_pilot 3480037 3108480
[2025-02-25 11:22:58] 2025-02-25 16:22:58,087 [wrapper] Test setup, not cleaning
[2025-02-25 11:22:58] 2025-02-25 16:22:58,092 [wrapper] apfmon messages muted
[2025-02-25 11:22:58] 2025-02-25 16:22:58,094 [wrapper] ==== wrapper stdout END ====
[2025-02-25 11:22:58] 2025-02-25 16:22:58,097 [wrapper] ==== wrapper stderr END ====
[2025-02-25 11:22:58]  *** Error codes and diagnostics ***
[2025-02-25 11:22:58]     "exeErrorCode": 0,
[2025-02-25 11:22:58]     "exeErrorDiag": "",
[2025-02-25 11:22:58]     "pilotErrorCode": 0,
[2025-02-25 11:22:58]     "pilotErrorDiag": "",
[2025-02-25 11:22:58]  *** Listing of results directory ***
[2025-02-25 11:22:58] total 430392
[2025-02-25 11:22:58] -rw-r--r--. 1 boincer umatlas    491065 Feb 25 09:02 pilot3.tar.gz
[2025-02-25 11:22:58] -rwx------. 1 boincer umatlas     35865 Feb 25 09:20 runpilot2-wrapper.sh
[2025-02-25 11:22:58] -rw-r--r--. 1 boincer umatlas      5118 Feb 25 09:21 queuedata.json
[2025-02-25 11:22:58] -rw-r--r--. 1 boincer umatlas       100 Feb 25 09:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 11:22:58] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 25 09:47 run_atlas
[2025-02-25 11:22:58] -rw-r--r--. 1 boincer umatlas       105 Feb 25 09:47 job.xml
[2025-02-25 11:22:58] -rw-r--r--. 2 boincer umatlas 250860527 Feb 25 09:47 EVNT.43401135._000070.pool.root.1
[2025-02-25 11:22:58] -rw-r--r--. 2 boincer umatlas     17569 Feb 25 09:47 start_atlas.sh
[2025-02-25 11:22:58] drwxrwx--x. 2 boincer umatlas      4096 Feb 25 09:47 shared
[2025-02-25 11:22:58] -rw-r--r--. 2 boincer umatlas    503556 Feb 25 09:47 input.tar.gz
[2025-02-25 11:22:58] -rw-r--r--. 1 boincer umatlas         0 Feb 25 09:47 boinc_lockfile
[2025-02-25 11:22:58] -rw-r--r--. 1 boincer umatlas      2558 Feb 25 09:47 pandaJob.out
[2025-02-25 11:22:58] -rw-------. 1 boincer umatlas       467 Feb 25 09:47 setup.sh.local
[2025-02-25 11:22:58] -rw-------. 1 boincer umatlas    988282 Feb 25 09:47 agis_schedconf.cvmfs.json
[2025-02-25 11:22:58] -rw-------. 1 boincer umatlas   1577983 Feb 25 09:47 agis_ddmendpoints.agis.ALL.json
[2025-02-25 11:22:58] drwx------. 4 boincer umatlas      4096 Feb 25 09:47 pilot3
[2025-02-25 11:22:58] -rw-------. 1 boincer umatlas 184302035 Feb 25 11:22 HITS.43401137._001442.pool.root.1
[2025-02-25 11:22:58] -rw-------. 1 boincer umatlas        95 Feb 25 11:22 pilot_heartbeat.json
[2025-02-25 11:22:58] -rw-r--r--. 1 boincer umatlas       530 Feb 25 11:22 boinc_task_state.xml
[2025-02-25 11:22:58] -rw-------. 1 boincer umatlas      1046 Feb 25 11:22 memory_monitor_summary.json
[2025-02-25 11:22:58] -rw-------. 1 boincer umatlas    321630 Feb 25 11:22 log.43401137._001442.job.log.tgz.1
[2025-02-25 11:22:58] -rw-------. 1 boincer umatlas      7748 Feb 25 11:22 heartbeat.json
[2025-02-25 11:22:58] -rw-r--r--. 1 boincer umatlas      6854 Feb 25 11:22 init_data.xml
[2025-02-25 11:22:58] -rw-r--r--. 1 boincer umatlas      8192 Feb 25 11:22 boinc_mmap_file
[2025-02-25 11:22:58] -rw-r--r--. 1 boincer umatlas        27 Feb 25 11:22 wrapper_checkpoint.txt
[2025-02-25 11:22:58] -rw-------. 1 boincer umatlas      4338 Feb 25 11:22 pilotlog.txt
[2025-02-25 11:22:58] -rw-------. 1 boincer umatlas    555456 Feb 25 11:22 log.43401137._001442.job.log.1
[2025-02-25 11:22:58] -rw-------. 1 boincer umatlas       357 Feb 25 11:22 output.list
[2025-02-25 11:22:58] -rw-r--r--. 1 boincer umatlas       620 Feb 25 11:22 runtime_log
[2025-02-25 11:22:58] -rw-------. 1 boincer umatlas    901120 Feb 25 11:22 result.tar.gz
[2025-02-25 11:22:58] -rw-r--r--. 1 boincer umatlas     11418 Feb 25 11:22 runtime_log.err
[2025-02-25 11:22:58] -rw-------. 1 boincer umatlas       656 Feb 25 11:22 9u6MDmQyA76nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmLfwKDmqs2xUn.diag
[2025-02-25 11:22:58] -rw-r--r--. 1 boincer umatlas     22022 Feb 25 11:22 stderr.txt
[2025-02-25 11:22:58] HITS file was successfully produced:
[2025-02-25 11:22:58] -rw-------. 1 boincer umatlas 184302035 Feb 25 11:22 shared/HITS.pool.root.1
[2025-02-25 11:22:58]  *** Contents of shared directory: ***
[2025-02-25 11:22:58] total 426364
[2025-02-25 11:22:58] -rw-r--r--. 2 boincer umatlas 250860527 Feb 25 09:47 ATLAS.root_0
[2025-02-25 11:22:58] -rw-r--r--. 2 boincer umatlas     17569 Feb 25 09:47 start_atlas.sh
[2025-02-25 11:22:58] -rw-r--r--. 2 boincer umatlas    503556 Feb 25 09:47 input.tar.gz
[2025-02-25 11:22:58] -rw-------. 1 boincer umatlas 184302035 Feb 25 11:22 HITS.pool.root.1
[2025-02-25 11:22:58] -rw-------. 1 boincer umatlas    901120 Feb 25 11:22 result.tar.gz
11:22:59 (3102976): run_atlas exited; CPU time 36412.161553
11:22:59 (3102976): called boinc_finish(0)

</stderr_txt>
]]>

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