Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:11:21 (72762): wrapper (7.7.26015): starting
11:11:21 (72762): wrapper: running run_atlas (--nthreads 9)
[2025-02-25 11:11:21] Arguments: --nthreads 9
[2025-02-25 11:11:21] Threads: 9
[2025-02-25 11:11:21] Checking for CVMFS
[2025-02-25 11:11:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 11:11:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 11:11:22] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 11:11:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 11:11:23] 2.11.2.0 6637 50390 158144 143043 0 386 14181424 18432000 13506 130560 0 83028263 99.589 85838611 48612 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-25 11:11:23] CVMFS is ok
[2025-02-25 11:11:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 11:11:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 11:11:24] Further information can be found at the LHC@home message board.
[2025-02-25 11:11:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 11:11:24] Checking for apptainer binary...
[2025-02-25 11:11:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 11:11:24] Running /usr/bin/apptainer --version
[2025-02-25 11:11:25] apptainer version 1.3.2-1.el7
[2025-02-25 11:11:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 11:11:43] c-210-35-3.aglt2.org
[2025-02-25 11:11:43] apptainer works
[2025-02-25 11:11:43] Set ATHENA_PROC_NUMBER=9
[2025-02-25 11:11:43] Set ATHENA_CORE_NUMBER=9
[2025-02-25 11:11:43] Starting ATLAS job with PandaID=6530099603
[2025-02-25 11:11:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 14:30:16]  *** The last 200 lines of the pilot log: ***
[2025-02-25 14:30:16] 2025-02-25 19:29:57,760 | INFO     | intersect: -97613002150.71321
[2025-02-25 14:30:16] 2025-02-25 19:29:57,760 | INFO     | chi2: 7.553832677221627
[2025-02-25 14:30:16] 2025-02-25 19:29:57,761 | INFO     | model: linear, x: [1740500270.0, 1740500331.0, 1740500392.0, 1740500453.0, 1740500514.0, 1740500575.0, 1740500636.0, 1740500697.0, 1740500758.0, 1740500819.0, 1740
[2025-02-25 14:30:16] 2025-02-25 19:29:57,761 | INFO     | sum of square deviations: 1900323142.590171
[2025-02-25 14:30:16] 2025-02-25 19:29:57,768 | INFO     | sum of deviations: 125215569344.22955
[2025-02-25 14:30:16] 2025-02-25 19:29:57,768 | INFO     | mean x: 1740505821.1147542
[2025-02-25 14:30:16] 2025-02-25 19:29:57,768 | INFO     | mean y: 2434571.3224043716
[2025-02-25 14:30:16] 2025-02-25 19:29:57,768 | INFO     | -- intersect: -114682495824.66074
[2025-02-25 14:30:16] 2025-02-25 19:29:57,768 | INFO     | intersect: -114682495824.66074
[2025-02-25 14:30:16] 2025-02-25 19:29:57,769 | INFO     | chi2: 6.765922019502233
[2025-02-25 14:30:16] 2025-02-25 19:29:57,769 | INFO     | current chi2=6.765922019502233 (change=10.430607764126368 %)
[2025-02-25 14:30:16] 2025-02-25 19:29:57,769 | INFO     | right removable region: 182
[2025-02-25 14:30:16] 2025-02-25 19:29:57,769 | INFO     | model: linear, x: [1740500575.0, 1740500636.0, 1740500697.0, 1740500758.0, 1740500819.0, 1740500880.0, 1740500941.0, 1740501002.0, 1740501063.0, 1740501124.0, 1740
[2025-02-25 14:30:16] 2025-02-25 19:29:57,769 | INFO     | sum of square deviations: 1900321313.3551862
[2025-02-25 14:30:16] 2025-02-25 19:29:57,770 | INFO     | sum of deviations: 63165167273.85245
[2025-02-25 14:30:16] 2025-02-25 19:29:57,770 | INFO     | mean x: 1740506126.1202185
[2025-02-25 14:30:16] 2025-02-25 19:29:57,770 | INFO     | mean y: 2475435.6885245903
[2025-02-25 14:30:16] 2025-02-25 19:29:57,770 | INFO     | -- intersect: -57850562271.62468
[2025-02-25 14:30:16] 2025-02-25 19:29:57,770 | INFO     | intersect: -57850562271.62468
[2025-02-25 14:30:16] 2025-02-25 19:29:57,771 | INFO     | chi2: 4.299914086187361
[2025-02-25 14:30:16] 2025-02-25 19:29:57,771 | INFO     | current chi2=4.299914086187361 (change=43.07639221141829 %)
[2025-02-25 14:30:16] 2025-02-25 19:29:57,771 | INFO     | model: linear, x: [1740500880.0, 1740500941.0, 1740501002.0, 1740501063.0, 1740501124.0, 1740501185.0, 1740501246.0, 1740501307.0, 1740501368.0, 1740501429.0, 1740
[2025-02-25 14:30:16] 2025-02-25 19:29:57,776 | INFO     | sum of square deviations: 1748767575.7809021
[2025-02-25 14:30:16] 2025-02-25 19:29:57,777 | INFO     | sum of deviations: 23373814540.0618
[2025-02-25 14:30:16] 2025-02-25 19:29:57,777 | INFO     | mean x: 1740506278.6235955
[2025-02-25 14:30:16] 2025-02-25 19:29:57,777 | INFO     | mean y: 2515466.7471910114
[2025-02-25 14:30:16] 2025-02-25 19:29:57,778 | INFO     | -- intersect: -23260879581.159393
[2025-02-25 14:30:16] 2025-02-25 19:29:57,778 | INFO     | intersect: -23260879581.159393
[2025-02-25 14:30:16] 2025-02-25 19:29:57,778 | INFO     | chi2: 2.5415190498291365
[2025-02-25 14:30:16] 2025-02-25 19:29:57,778 | INFO     | current chi2=2.5415190498291365 (change=40.8937248771255 %)
[2025-02-25 14:30:16] 2025-02-25 19:29:57,778 | INFO     | model: linear, x: [1740501185.0, 1740501246.0, 1740501307.0, 1740501368.0, 1740501429.0, 1740501490.0, 1740501551.0, 1740501612.0, 1740501673.0, 1740501734.0, 1740
[2025-02-25 14:30:16] 2025-02-25 19:29:57,778 | INFO     | sum of square deviations: 1605493063.2023082
[2025-02-25 14:30:16] 2025-02-25 19:29:57,779 | INFO     | sum of deviations: -12652504698.254337
[2025-02-25 14:30:16] 2025-02-25 19:29:57,779 | INFO     | mean x: 1740506431.1271677
[2025-02-25 14:30:16] 2025-02-25 19:29:57,779 | INFO     | mean y: 2553766.011560694
[2025-02-25 14:30:16] 2025-02-25 19:29:57,780 | INFO     | -- intersect: 13719066345.177662
[2025-02-25 14:30:16] 2025-02-25 19:29:57,780 | INFO     | intersect: 13719066345.177662
[2025-02-25 14:30:16] 2025-02-25 19:29:57,780 | INFO     | chi2: 1.0688899619726924
[2025-02-25 14:30:16] 2025-02-25 19:29:57,780 | INFO     | current chi2=1.0688899619726924 (change=57.94287034580549 %)
[2025-02-25 14:30:16] 2025-02-25 19:29:57,784 | INFO     | model: linear, x: [1740501490.0, 1740501551.0, 1740501612.0, 1740501673.0, 1740501734.0, 1740501795.0, 1740501856.0, 1740501917.0, 1740501978.0, 1740502039.0, 1740
[2025-02-25 14:30:16] 2025-02-25 19:29:57,785 | INFO     | sum of square deviations: 1470265213.1190438
[2025-02-25 14:30:16] 2025-02-25 19:29:57,785 | INFO     | sum of deviations: -25028839829.24999
[2025-02-25 14:30:16] 2025-02-25 19:29:57,785 | INFO     | mean x: 1740506583.6309524
[2025-02-25 14:30:16] 2025-02-25 19:29:57,786 | INFO     | mean y: 2567661.125
[2025-02-25 14:30:16] 2025-02-25 19:29:57,786 | INFO     | -- intersect: 29631821019.462482
[2025-02-25 14:30:16] 2025-02-25 19:29:57,786 | INFO     | intersect: 29631821019.462482
[2025-02-25 14:30:16] 2025-02-25 19:29:57,786 | INFO     | chi2: 0.8585977481485634
[2025-02-25 14:30:16] 2025-02-25 19:29:57,786 | INFO     | current chi2=0.8585977481485634 (change=19.673887987124857 %)
[2025-02-25 14:30:16] 2025-02-25 19:29:57,786 | INFO     | left removable region: 40
[2025-02-25 14:30:16] 2025-02-25 19:29:57,786 | INFO     | model: linear, x: [1740502710.0, 1740502771.0, 1740502832.0, 1740502893.0, 1740502954.0, 1740503015.0, 1740503077.0, 1740503138.0, 1740503199.0, 1740503260.0, 1740
[2025-02-25 14:30:16] 2025-02-25 19:29:57,786 | INFO     | sum of square deviations: 887821012.9577459
[2025-02-25 14:30:16] 2025-02-25 19:29:57,787 | INFO     | sum of deviations: -6264432878.422533
[2025-02-25 14:30:16] 2025-02-25 19:29:57,787 | INFO     | mean x: 1740507010.633803
[2025-02-25 14:30:16] 2025-02-25 19:29:57,787 | INFO     | mean y: 2572860.8380281692
[2025-02-25 14:30:16] 2025-02-25 19:29:57,787 | INFO     | -- intersect: 12283527223.717287
[2025-02-25 14:30:16] 2025-02-25 19:29:57,787 | INFO     | intersect: 12283527223.717287
[2025-02-25 14:30:16] 2025-02-25 19:29:57,788 | INFO     | chi2: 0.017461616085249907
[2025-02-25 14:30:16] 2025-02-25 19:29:57,788 | INFO     | -- intersect: 12283527223.717287
[2025-02-25 14:30:16] 2025-02-25 19:29:57,788 | INFO     | current memory leak: -7.06 B/s (using 142 data points, chi2=0.02)
[2025-02-25 14:30:16] 2025-02-25 19:29:57,793 | INFO     | ..............................
[2025-02-25 14:30:16] 2025-02-25 19:29:57,793 | INFO     | . Timing measurements:
[2025-02-25 14:30:16] 2025-02-25 19:29:57,793 | INFO     | . get job = 0 s
[2025-02-25 14:30:16] 2025-02-25 19:29:57,793 | INFO     | . initial setup = 9 s
[2025-02-25 14:30:16] 2025-02-25 19:29:57,793 | INFO     | . payload setup = 73 s
[2025-02-25 14:30:16] 2025-02-25 19:29:57,793 | INFO     | . stage-in = 0 s
[2025-02-25 14:30:16] 2025-02-25 19:29:57,793 | INFO     | . payload execution = 11536 s
[2025-02-25 14:30:16] 2025-02-25 19:29:57,793 | INFO     | . stage-out = 4 s
[2025-02-25 14:30:16] 2025-02-25 19:29:57,794 | INFO     | . log creation = 1 s
[2025-02-25 14:30:16] 2025-02-25 19:29:57,794 | INFO     | ..............................
[2025-02-25 14:30:16] 2025-02-25 19:29:58,367 | INFO     | 
[2025-02-25 14:30:16] 2025-02-25 19:29:58,368 | INFO     | job summary report
[2025-02-25 14:30:16] 2025-02-25 19:29:58,368 | INFO     | --------------------------------------------------
[2025-02-25 14:30:16] 2025-02-25 19:29:58,368 | INFO     | PanDA job id: 6530099603
[2025-02-25 14:30:16] 2025-02-25 19:29:58,368 | INFO     | task id: 43401121
[2025-02-25 14:30:16] 2025-02-25 19:29:58,368 | INFO     | errors: (none)
[2025-02-25 14:30:16] 2025-02-25 19:29:58,368 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 14:30:16] 2025-02-25 19:29:58,368 | INFO     | pilot state: finished 
[2025-02-25 14:30:16] 2025-02-25 19:29:58,368 | INFO     | transexitcode: 0
[2025-02-25 14:30:16] 2025-02-25 19:29:58,368 | INFO     | exeerrorcode: 0
[2025-02-25 14:30:16] 2025-02-25 19:29:58,368 | INFO     | exeerrordiag: 
[2025-02-25 14:30:16] 2025-02-25 19:29:58,368 | INFO     | exitcode: 0
[2025-02-25 14:30:16] 2025-02-25 19:29:58,368 | INFO     | exitmsg: OK
[2025-02-25 14:30:16] 2025-02-25 19:29:58,368 | INFO     | cpuconsumptiontime: 39879 s
[2025-02-25 14:30:16] 2025-02-25 19:29:58,368 | INFO     | nevents: 400
[2025-02-25 14:30:16] 2025-02-25 19:29:58,369 | INFO     | neventsw: 0
[2025-02-25 14:30:16] 2025-02-25 19:29:58,369 | INFO     | pid: 93975
[2025-02-25 14:30:16] 2025-02-25 19:29:58,369 | INFO     | pgrp: 93975
[2025-02-25 14:30:16] 2025-02-25 19:29:58,369 | INFO     | corecount: 9
[2025-02-25 14:30:16] 2025-02-25 19:29:58,369 | INFO     | event service: False
[2025-02-25 14:30:16] 2025-02-25 19:29:58,369 | INFO     | sizes: {0: 2376776, 1: 2376975, 12: 2376975, 22: 2377003, 33: 2377031, 44: 2377087, 47: 2377449, 55: 2377505, 11611: 2406716, 11617: 2415657, 11619: 2415713, 11679
[2025-02-25 14:30:16] 2025-02-25 19:29:58,369 | INFO     | --------------------------------------------------
[2025-02-25 14:30:16] 2025-02-25 19:29:58,369 | INFO     | 
[2025-02-25 14:30:16] 2025-02-25 19:29:58,369 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-25 14:30:16] 2025-02-25 19:29:58,693 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 14:30:16] 2025-02-25 19:29:58,719 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 14:30:16] 2025-02-25 19:29:58,719 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 14:30:16] 2025-02-25 19:29:58,720 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 14:30:16] 2025-02-25 19:29:58,720 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 14:30:16] 2025-02-25 19:29:58,720 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 14:30:16] 2025-02-25 19:29:58,720 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 14:30:16] 2025-02-25 19:29:58,720 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 14:30:16] 2025-02-25 19:29:58,720 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 14:30:16] 2025-02-25 19:29:58,720 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 14:30:16] 2025-02-25 19:29:58,720 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 14:30:16] 2025-02-25 19:29:58,750 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 14:30:16] 2025-02-25 19:29:58,750 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 14:30:16] 2025-02-25 19:29:58,750 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 14:30:16] 2025-02-25 19:29:58,750 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 14:30:16] 2025-02-25 19:29:58,750 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 14:30:16] 2025-02-25 19:29:58,750 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 14:30:16] 2025-02-25 19:29:58,750 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 14:30:16] 2025-02-25 19:29:58,750 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 14:30:16] 2025-02-25 19:29:58,750 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 14:30:16] 2025-02-25 19:29:58,750 | INFO     | job 6530099603 has completed (purged errors)
[2025-02-25 14:30:16] 2025-02-25 19:29:58,750 | INFO     | overall cleanup function is called
[2025-02-25 14:30:16] 2025-02-25 19:29:59,785 | INFO     | --- collectZombieJob: --- 10, [93975]
[2025-02-25 14:30:16] 2025-02-25 19:29:59,785 | INFO     | zombie collector waiting for pid 93975
[2025-02-25 14:30:16] 2025-02-25 19:29:59,786 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 14:30:16] 2025-02-25 19:29:59,786 | INFO     | collected zombie processes
[2025-02-25 14:30:16] 2025-02-25 19:29:59,786 | INFO     | will attempt to kill all subprocesses of pid=93975
[2025-02-25 14:30:16] 2025-02-25 19:30:00,271 | INFO     | process IDs to be killed: [93975] (in reverse order)
[2025-02-25 14:30:16] 2025-02-25 19:30:00,870 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 14:30:16] 2025-02-25 19:30:00,870 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 14:30:16] 2025-02-25 19:30:00,877 | INFO     | did not find any defunct processes belonging to 93975
[2025-02-25 14:30:16] 2025-02-25 19:30:00,884 | INFO     | did not find any defunct processes belonging to 93975
[2025-02-25 14:30:16] 2025-02-25 19:30:00,885 | INFO     | ready for new job
[2025-02-25 14:30:16] 2025-02-25 19:30:00,885 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 14:30:16] 2025-02-25 19:30:00,887 | INFO     | **************************************
[2025-02-25 14:30:16] 2025-02-25 19:30:00,887 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 14:30:16] 2025-02-25 19:30:00,888 | INFO     | **************************************
[2025-02-25 14:30:16] 2025-02-25 19:30:00,888 | INFO     | 
[2025-02-25 14:30:16] 2025-02-25 19:30:00,891 | INFO     | architecture information:
[2025-02-25 14:30:16] 2025-02-25 19:30:00,895 | INFO     | executing command: cat /etc/os-release
[2025-02-25 14:30:16] 2025-02-25 19:30:00,927 | INFO     | cat /etc/os-release:
[2025-02-25 14:30:16] NAME="CentOS Linux"
[2025-02-25 14:30:16] VERSION="7 (Core)"
[2025-02-25 14:30:16] ID="centos"
[2025-02-25 14:30:16] ID_LIKE="rhel fedora"
[2025-02-25 14:30:16] VERSION_ID="7"
[2025-02-25 14:30:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 14:30:16] ANSI_COLOR="0;31"
[2025-02-25 14:30:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 14:30:16] HOME_URL="https://www.centos.org/"
[2025-02-25 14:30:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 14:30:16] 
[2025-02-25 14:30:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 14:30:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 14:30:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 14:30:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 14:30:16] 
[2025-02-25 14:30:16] 2025-02-25 19:30:00,928 | INFO     | **************************************
[2025-02-25 14:30:16] 2025-02-25 19:30:01,431 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-25 14:30:16] 2025-02-25 19:30:01,618 | INFO     | sufficient remaining disk space (55665754112 B)
[2025-02-25 14:30:16] 2025-02-25 19:30:01,619 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 14:30:16] 2025-02-25 19:30:01,619 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 14:30:16] 2025-02-25 19:30:01,619 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 14:30:16] 2025-02-25 19:30:01,619 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-25 14:30:16] 2025-02-25 19:30:01,620 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 14:30:16] 2025-02-25 19:30:01,620 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 14:30:16] 2025-02-25 19:30:01,620 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 14:30:16] 2025-02-25 19:30:01,631 | INFO     | all payload control threads have been joined
[2025-02-25 14:30:16] 2025-02-25 19:30:01,678 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 14:30:16] 2025-02-25 19:30:01,678 | INFO     | aborting loop
[2025-02-25 14:30:16] 2025-02-25 19:30:02,255 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 14:30:16] 2025-02-25 19:30:02,524 | INFO     | all data control threads have been joined
[2025-02-25 14:30:16] 2025-02-25 19:30:02,623 | INFO     | [job] retrieve thread has finished
[2025-02-25 14:30:16] 2025-02-25 19:30:02,649 | INFO     | [payload] control thread has finished
[2025-02-25 14:30:16] 2025-02-25 19:30:02,684 | INFO     | [job] job monitor thread has finished
[2025-02-25 14:30:16] 2025-02-25 19:30:02,827 | INFO     | all job control threads have been joined
[2025-02-25 14:30:16] 2025-02-25 19:30:02,851 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 14:30:16] 2025-02-25 19:30:02,915 | INFO     | [data] copytool_in thread has finished
[2025-02-25 14:30:16] 2025-02-25 19:30:02,926 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 14:30:16] 2025-02-25 19:30:03,509 | INFO     | [job] validate thread has finished
[2025-02-25 14:30:16] 2025-02-25 19:30:03,532 | INFO     | [data] control thread has finished
[2025-02-25 14:30:16] 2025-02-25 19:30:03,564 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 14:30:16] 2025-02-25 19:30:03,588 | INFO     | [payload] validate_post thread has finished
[2025-02-25 14:30:16] 2025-02-25 19:30:03,625 | INFO     | [data] copytool_out thread has finished
[2025-02-25 14:30:16] 2025-02-25 19:30:03,833 | INFO     | [job] control thread has finished
[2025-02-25 14:30:16] 2025-02-25 19:30:03,909 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 14:30:16] 2025-02-25 19:30:03,932 | INFO     | [job] queue monitor thread has finished
[2025-02-25 14:30:16] 2025-02-25 19:30:04,010 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 14:30:16] 2025-02-25 19:30:04,204 | INFO     | [payload] failed_post thread has finished
[2025-02-25 14:30:16] 2025-02-25 19:30:06,265 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 14:30:16] 2025-02-25 19:30:07,938 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139933518178112)>', '<ExcThread(monitor, started 139933213763328)>']
[2025-02-25 14:30:16] 2025-02-25 19:30:08,661 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 14:30:16] 2025-02-25 19:30:08,661 | INFO     | [monitor] control thread has ended
[2025-02-25 14:30:16] 2025-02-25 19:30:12,964 | INFO     | all workflow threads have been joined
[2025-02-25 14:30:16] 2025-02-25 19:30:12,965 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 14:30:16] 2025-02-25 19:30:12,965 | INFO     | traces error code: 0
[2025-02-25 14:30:16] 2025-02-25 19:30:12,966 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 14:30:16] 2025-02-25 19:30:13,758 [wrapper] ==== pilot stdout END ====
[2025-02-25 14:30:16] 2025-02-25 19:30:13,839 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 14:30:16] 2025-02-25 19:30:13,886 [wrapper] pilotpid: 80466
[2025-02-25 14:30:16] 2025-02-25 19:30:13,927 [wrapper] Pilot exit status: 0
[2025-02-25 14:30:16] 2025-02-25 19:30:14,245 [wrapper] pandaids: 6530099603
[2025-02-25 14:30:16] 2025-02-25 19:30:14,512 [wrapper] cleanup supervisor_pilot 184006 80467
[2025-02-25 14:30:16] 2025-02-25 19:30:14,560 [wrapper] Test setup, not cleaning
[2025-02-25 14:30:16] 2025-02-25 19:30:14,744 [wrapper] apfmon messages muted
[2025-02-25 14:30:16] 2025-02-25 19:30:14,785 [wrapper] ==== wrapper stdout END ====
[2025-02-25 14:30:16] 2025-02-25 19:30:14,883 [wrapper] ==== wrapper stderr END ====
[2025-02-25 14:30:16]  *** Error codes and diagnostics ***
[2025-02-25 14:30:16]     "exeErrorCode": 0,
[2025-02-25 14:30:16]     "exeErrorDiag": "",
[2025-02-25 14:30:16]     "pilotErrorCode": 0,
[2025-02-25 14:30:16]     "pilotErrorDiag": "",
[2025-02-25 14:30:16]  *** Listing of results directory ***
[2025-02-25 14:30:16] total 430484
[2025-02-25 14:30:16] -rw-r--r-- 1 boincer umatlas    491065 Feb 25 05:12 pilot3.tar.gz
[2025-02-25 14:30:16] -rwx------ 1 boincer umatlas     35865 Feb 25 05:46 runpilot2-wrapper.sh
[2025-02-25 14:30:16] -rw-r--r-- 1 boincer umatlas      5118 Feb 25 05:46 queuedata.json
[2025-02-25 14:30:16] -rw-r--r-- 1 boincer umatlas       100 Feb 25 11:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 14:30:16] -rwxr-xr-x 1 boincer umatlas      7986 Feb 25 11:11 run_atlas
[2025-02-25 14:30:16] -rw-r--r-- 1 boincer umatlas       105 Feb 25 11:11 job.xml
[2025-02-25 14:30:16] -rw-r--r-- 2 boincer umatlas 248891515 Feb 25 11:11 EVNT.43401119._000032.pool.root.1
[2025-02-25 14:30:16] drwxrwx--x 2 boincer umatlas      4096 Feb 25 11:11 shared
[2025-02-25 14:30:16] -rw-r--r-- 2 boincer umatlas    503549 Feb 25 11:11 input.tar.gz
[2025-02-25 14:30:16] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 11:11 start_atlas.sh
[2025-02-25 14:30:16] -rw-r--r-- 1 boincer umatlas         0 Feb 25 11:11 boinc_lockfile
[2025-02-25 14:30:16] -rw-r--r-- 1 boincer umatlas      2547 Feb 25 11:11 pandaJob.out
[2025-02-25 14:30:16] -rw------- 1 boincer umatlas       467 Feb 25 11:11 setup.sh.local
[2025-02-25 14:30:16] -rw------- 1 boincer umatlas    988282 Feb 25 11:13 agis_schedconf.cvmfs.json
[2025-02-25 14:30:16] drwx------ 4 boincer umatlas      4096 Feb 25 11:13 pilot3
[2025-02-25 14:30:16] -rw-r--r-- 1 boincer umatlas      6354 Feb 25 14:21 init_data.xml
[2025-02-25 14:30:16] -rw------- 1 boincer umatlas 184982410 Feb 25 14:27 HITS.43401121._000748.pool.root.1
[2025-02-25 14:30:16] -rw-r--r-- 1 boincer umatlas       531 Feb 25 14:27 boinc_task_state.xml
[2025-02-25 14:30:16] -rw------- 1 boincer umatlas      1066 Feb 25 14:28 memory_monitor_summary.json
[2025-02-25 14:30:16] -rw------- 1 boincer umatlas   1577983 Feb 25 14:28 agis_ddmendpoints.agis.ALL.json
[2025-02-25 14:30:16] -rw------- 1 boincer umatlas    409942 Feb 25 14:28 log.43401121._000748.job.log.tgz.1
[2025-02-25 14:30:16] -rw------- 1 boincer umatlas        95 Feb 25 14:29 pilot_heartbeat.json
[2025-02-25 14:30:16] -rw------- 1 boincer umatlas      7779 Feb 25 14:29 heartbeat.json
[2025-02-25 14:30:16] -rw------- 1 boincer umatlas      4338 Feb 25 14:30 pilotlog.txt
[2025-02-25 14:30:16] -rw-r--r-- 1 boincer umatlas        28 Feb 25 14:30 wrapper_checkpoint.txt
[2025-02-25 14:30:16] -rw------- 1 boincer umatlas   1156141 Feb 25 14:30 log.43401121._000748.job.log.1
[2025-02-25 14:30:16] -rw------- 1 boincer umatlas       357 Feb 25 14:30 output.list
[2025-02-25 14:30:16] -rw-r--r-- 1 boincer umatlas       620 Feb 25 14:30 runtime_log
[2025-02-25 14:30:16] -rw------- 1 boincer umatlas   1587200 Feb 25 14:30 result.tar.gz
[2025-02-25 14:30:16] -rw-r--r-- 1 boincer umatlas     11429 Feb 25 14:30 runtime_log.err
[2025-02-25 14:30:16] -rw------- 1 boincer umatlas       663 Feb 25 14:30 OHlLDmEd766nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmlDwKDmIglvMn.diag
[2025-02-25 14:30:16] -rw-r--r-- 1 boincer umatlas      8192 Feb 25 14:30 boinc_mmap_file
[2025-02-25 14:30:16] -rw-r--r-- 1 boincer umatlas     21661 Feb 25 14:30 stderr.txt
[2025-02-25 14:30:16] HITS file was successfully produced:
[2025-02-25 14:30:16] -rw------- 1 boincer umatlas 184982410 Feb 25 14:27 shared/HITS.pool.root.1
[2025-02-25 14:30:16]  *** Contents of shared directory: ***
[2025-02-25 14:30:16] total 425780
[2025-02-25 14:30:16] -rw-r--r-- 2 boincer umatlas 248891515 Feb 25 11:11 ATLAS.root_0
[2025-02-25 14:30:16] -rw-r--r-- 2 boincer umatlas    503549 Feb 25 11:11 input.tar.gz
[2025-02-25 14:30:16] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 11:11 start_atlas.sh
[2025-02-25 14:30:16] -rw------- 1 boincer umatlas 184982410 Feb 25 14:27 HITS.pool.root.1
[2025-02-25 14:30:16] -rw------- 1 boincer umatlas   1587200 Feb 25 14:30 result.tar.gz
14:30:17 (72762): run_atlas exited; CPU time 39785.323873
14:30:17 (72762): called boinc_finish(0)

</stderr_txt>
]]>

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