Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:28:38 (19302): wrapper (7.7.26015): starting
08:28:38 (19302): wrapper: running run_atlas (--nthreads 12)
[2025-02-25 08:28:38] Arguments: --nthreads 12
[2025-02-25 08:28:38] Threads: 12
[2025-02-25 08:28:38] Checking for CVMFS
[2025-02-25 08:28:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 08:28:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 08:28:39] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 08:28:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 08:28:39] 2.11.2.0 3124 6863 120712 143040 3 1 8341103 20275200 1 130560 0 5015478 99.789 2338147 26741 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-25 08:28:39] CVMFS is ok
[2025-02-25 08:28:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 08:28:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 08:28:39] Further information can be found at the LHC@home message board.
[2025-02-25 08:28:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 08:28:39] Checking for apptainer binary...
[2025-02-25 08:28:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 08:28:39] Running /usr/bin/apptainer --version
[2025-02-25 08:28:39] apptainer version 1.3.2-1.el7
[2025-02-25 08:28:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 08:28:40] c-205-29.aglt2.org
[2025-02-25 08:28:40] apptainer works
[2025-02-25 08:28:40] Set ATHENA_PROC_NUMBER=12
[2025-02-25 08:28:40] Set ATHENA_CORE_NUMBER=12
[2025-02-25 08:28:40] Starting ATLAS job with PandaID=6530322670
[2025-02-25 08:28:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 09:49:27]  *** The last 200 lines of the pilot log: ***
[2025-02-25 09:49:27]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-02-25 09:49:27]  is_altstaged=None
[2025-02-25 09:49:27]  is_tar=False
[2025-02-25 09:49:27]  lfn=log.43401137._000821.job.log.tgz.1
[2025-02-25 09:49:27]  mtime=0
[2025-02-25 09:49:27]  protocol_id=None
[2025-02-25 09:49:27]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-25 09:49:27]  replicas=None
[2025-02-25 09:49:27]  scope=mc23_13p6TeV
[2025-02-25 09:49:27]  status=None
[2025-02-25 09:49:27]  status_code=0
[2025-02-25 09:49:27]  storage_token=
[2025-02-25 09:49:27]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6530322670/log.43401137._000821.job.log.tgz.1
[2025-02-25 09:49:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c3/af/log.43401137._000821.job.log.tgz.1
[2025-02-25 09:49:27]  workdir=None
[2025-02-25 09:49:27] ]
[2025-02-25 09:49:27] 2025-02-25 14:49:04,960 | INFO     | transferring file log.43401137._000821.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6530322670/log.43401137._000821.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-02-25 09:49:27] 2025-02-25 14:49:04,960 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6530322670/log.43401137._000821.job.log.tgz.1 /tmp/boinchome/slots/0/log.43401137._000821.job
[2025-02-25 09:49:27] 2025-02-25 14:49:04,982 | INFO     | adding to output.list: log.43401137._000821.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c3/af/log.43401137._000821.job.log.tg
[2025-02-25 09:49:27] 2025-02-25 14:49:04,982 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-25 09:49:27] 2025-02-25 14:49:04,983 | INFO     | summary of transferred files:
[2025-02-25 09:49:27] 2025-02-25 14:49:04,983 | INFO     |  -- lfn=log.43401137._000821.job.log.tgz.1, status_code=0, status=transferred
[2025-02-25 09:49:27] 2025-02-25 14:49:04,983 | INFO     | stage-out finished correctly
[2025-02-25 09:49:27] 2025-02-25 14:49:05,489 | INFO     | PID=22971 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-02-25 09:49:27] 2025-02-25 14:49:06,970 | INFO     | monitor loop #354: job 0:6530322670 is in state 'finished'
[2025-02-25 09:49:27] 2025-02-25 14:49:06,970 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 09:49:27] 2025-02-25 14:49:07,073 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-25 09:49:27] 2025-02-25 14:49:08,640 | INFO     | job 6530322670 has state=finished
[2025-02-25 09:49:27] 2025-02-25 14:49:08,641 | INFO     | preparing for final server update for job 6530322670 in state='finished'
[2025-02-25 09:49:27] 2025-02-25 14:49:08,641 | INFO     | this job has now completed (state=finished)
[2025-02-25 09:49:27] 2025-02-25 14:49:08,641 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-25 09:49:27] 2025-02-25 14:49:08,642 | INFO     | log transfer has been attempted: DONE
[2025-02-25 09:49:27] 2025-02-25 14:49:08,642 | INFO     | job 6530322670 has finished - writing final server update
[2025-02-25 09:49:27] 2025-02-25 14:49:08,642 | INFO     | total number of processed events: 400 (read)
[2025-02-25 09:49:27] 2025-02-25 14:49:08,644 | INFO     | executing command: lscpu
[2025-02-25 09:49:27] 2025-02-25 14:49:08,671 | INFO     | found 12 cores (6 cores per socket, 2 sockets)
[2025-02-25 09:49:27] 2025-02-25 14:49:08,687 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-25 09:49:27] 2025-02-25 14:49:09,476 | INFO     | monitor loop #355: job 0:6530322670 is in state 'finished'
[2025-02-25 09:49:27] 2025-02-25 14:49:09,476 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 09:49:27] 2025-02-25 14:49:11,979 | INFO     | monitor loop #356: job 0:6530322670 is in state 'finished'
[2025-02-25 09:49:27] 2025-02-25 14:49:11,979 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 09:49:27] 2025-02-25 14:49:13,602 | INFO     | CPU arch script returned: x86-64-v2
[2025-02-25 09:49:27] 2025-02-25 14:49:13,603 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6530322670/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 09:49:27] 2025-02-25 14:49:13,604 | INFO     | extracted standard info from prmon json
[2025-02-25 09:49:27] 2025-02-25 14:49:13,604 | INFO     | extracted standard memory fields from prmon json
[2025-02-25 09:49:27] 2025-02-25 14:49:13,604 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-25 09:49:27] 2025-02-25 14:49:13,605 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 09:49:27] 2025-02-25 14:49:13,605 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 09:49:27] 2025-02-25 14:49:13,608 | INFO     | fitting pss+swap vs Time
[2025-02-25 09:49:27] 2025-02-25 14:49:13,608 | INFO     | model: linear, x: [1740490469.0, 1740490530.0, 1740490591.0, 1740490652.0, 1740490713.0, 1740490774.0, 1740490835.0, 1740490896.0, 1740490957.0, 1740491018.0, 1740
[2025-02-25 09:49:27] 2025-02-25 14:49:13,608 | INFO     | sum of square deviations: 115715658.0
[2025-02-25 09:49:27] 2025-02-25 14:49:13,609 | INFO     | sum of deviations: 18931085260.0
[2025-02-25 09:49:27] 2025-02-25 14:49:13,609 | INFO     | mean x: 1740492634.5
[2025-02-25 09:49:27] 2025-02-25 14:49:13,609 | INFO     | mean y: 2685644.5
[2025-02-25 09:49:27] 2025-02-25 14:49:13,609 | INFO     | -- intersect: -284741963676.1781
[2025-02-25 09:49:27] 2025-02-25 14:49:13,609 | INFO     | intersect: -284741963676.1781
[2025-02-25 09:49:27] 2025-02-25 14:49:13,610 | INFO     | chi2: 2.3838970873706886
[2025-02-25 09:49:27] 2025-02-25 14:49:13,610 | INFO     | -- intersect: -284741963676.1781
[2025-02-25 09:49:27] 2025-02-25 14:49:13,610 | INFO     | current memory leak: 163.60 B/s (using 72 data points, chi2=2.38)
[2025-02-25 09:49:27] 2025-02-25 14:49:13,610 | INFO     | ..............................
[2025-02-25 09:49:27] 2025-02-25 14:49:13,610 | INFO     | . Timing measurements:
[2025-02-25 09:49:27] 2025-02-25 14:49:13,611 | INFO     | . get job = 0 s
[2025-02-25 09:49:27] 2025-02-25 14:49:13,611 | INFO     | . initial setup = 2 s
[2025-02-25 09:49:27] 2025-02-25 14:49:13,611 | INFO     | . payload setup = 7 s
[2025-02-25 09:49:27] 2025-02-25 14:49:13,611 | INFO     | . stage-in = 0 s
[2025-02-25 09:49:27] 2025-02-25 14:49:13,611 | INFO     | . payload execution = 4781 s
[2025-02-25 09:49:27] 2025-02-25 14:49:13,611 | INFO     | . stage-out = 0 s
[2025-02-25 09:49:27] 2025-02-25 14:49:13,611 | INFO     | . log creation = 0 s
[2025-02-25 09:49:27] 2025-02-25 14:49:13,611 | INFO     | ..............................
[2025-02-25 09:49:27] 2025-02-25 14:49:14,019 | INFO     | 
[2025-02-25 09:49:27] 2025-02-25 14:49:14,019 | INFO     | job summary report
[2025-02-25 09:49:27] 2025-02-25 14:49:14,019 | INFO     | --------------------------------------------------
[2025-02-25 09:49:27] 2025-02-25 14:49:14,020 | INFO     | PanDA job id: 6530322670
[2025-02-25 09:49:27] 2025-02-25 14:49:14,020 | INFO     | task id: 43401137
[2025-02-25 09:49:27] 2025-02-25 14:49:14,020 | INFO     | errors: (none)
[2025-02-25 09:49:27] 2025-02-25 14:49:14,020 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 09:49:27] 2025-02-25 14:49:14,020 | INFO     | pilot state: finished 
[2025-02-25 09:49:27] 2025-02-25 14:49:14,020 | INFO     | transexitcode: 0
[2025-02-25 09:49:27] 2025-02-25 14:49:14,021 | INFO     | exeerrorcode: 0
[2025-02-25 09:49:27] 2025-02-25 14:49:14,021 | INFO     | exeerrordiag: 
[2025-02-25 09:49:27] 2025-02-25 14:49:14,021 | INFO     | exitcode: 0
[2025-02-25 09:49:27] 2025-02-25 14:49:14,021 | INFO     | exitmsg: OK
[2025-02-25 09:49:27] 2025-02-25 14:49:14,021 | INFO     | cpuconsumptiontime: 44702 s
[2025-02-25 09:49:27] 2025-02-25 14:49:14,021 | INFO     | nevents: 400
[2025-02-25 09:49:27] 2025-02-25 14:49:14,022 | INFO     | neventsw: 0
[2025-02-25 09:49:27] 2025-02-25 14:49:14,022 | INFO     | pid: 29365
[2025-02-25 09:49:27] 2025-02-25 14:49:14,022 | INFO     | pgrp: 29365
[2025-02-25 09:49:27] 2025-02-25 14:49:14,022 | INFO     | corecount: 12
[2025-02-25 09:49:27] 2025-02-25 14:49:14,022 | INFO     | event service: False
[2025-02-25 09:49:27] 2025-02-25 14:49:14,022 | INFO     | sizes: {0: 2376956, 5: 2377162, 11: 2377218, 4792: 2403243, 4794: 2412184, 4796: 2412240, 4803: 2412538}
[2025-02-25 09:49:27] 2025-02-25 14:49:14,022 | INFO     | --------------------------------------------------
[2025-02-25 09:49:27] 2025-02-25 14:49:14,023 | INFO     | 
[2025-02-25 09:49:27] 2025-02-25 14:49:14,023 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-25 09:49:27] 2025-02-25 14:49:14,048 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 09:49:27] 2025-02-25 14:49:14,048 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 09:49:27] 2025-02-25 14:49:14,049 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 09:49:27] 2025-02-25 14:49:14,049 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 09:49:27] 2025-02-25 14:49:14,049 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 09:49:27] 2025-02-25 14:49:14,049 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 09:49:27] 2025-02-25 14:49:14,049 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 09:49:27] 2025-02-25 14:49:14,050 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 09:49:27] 2025-02-25 14:49:14,050 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 09:49:27] 2025-02-25 14:49:14,050 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 09:49:27] 2025-02-25 14:49:14,050 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 09:49:27] 2025-02-25 14:49:14,050 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 09:49:27] 2025-02-25 14:49:14,050 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 09:49:27] 2025-02-25 14:49:14,051 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 09:49:27] 2025-02-25 14:49:14,051 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 09:49:27] 2025-02-25 14:49:14,051 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 09:49:27] 2025-02-25 14:49:14,051 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 09:49:27] 2025-02-25 14:49:14,051 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 09:49:27] 2025-02-25 14:49:14,051 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 09:49:27] 2025-02-25 14:49:14,052 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 09:49:27] 2025-02-25 14:49:14,052 | INFO     | job 6530322670 has completed (purged errors)
[2025-02-25 09:49:27] 2025-02-25 14:49:14,052 | INFO     | overall cleanup function is called
[2025-02-25 09:49:27] 2025-02-25 14:49:15,060 | INFO     | --- collectZombieJob: --- 10, [29365]
[2025-02-25 09:49:27] 2025-02-25 14:49:15,060 | INFO     | zombie collector waiting for pid 29365
[2025-02-25 09:49:27] 2025-02-25 14:49:15,060 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 09:49:27] 2025-02-25 14:49:15,061 | INFO     | collected zombie processes
[2025-02-25 09:49:27] 2025-02-25 14:49:15,061 | INFO     | will attempt to kill all subprocesses of pid=29365
[2025-02-25 09:49:27] 2025-02-25 14:49:15,124 | INFO     | process IDs to be killed: [29365] (in reverse order)
[2025-02-25 09:49:27] 2025-02-25 14:49:15,175 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 09:49:27] 2025-02-25 14:49:15,175 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 09:49:27] 2025-02-25 14:49:15,179 | INFO     | did not find any defunct processes belonging to 29365
[2025-02-25 09:49:27] 2025-02-25 14:49:15,181 | INFO     | did not find any defunct processes belonging to 29365
[2025-02-25 09:49:27] 2025-02-25 14:49:15,182 | INFO     | ready for new job
[2025-02-25 09:49:27] 2025-02-25 14:49:15,182 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 09:49:27] 2025-02-25 14:49:15,183 | INFO     | **************************************
[2025-02-25 09:49:27] 2025-02-25 14:49:15,183 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 09:49:27] 2025-02-25 14:49:15,183 | INFO     | **************************************
[2025-02-25 09:49:27] 2025-02-25 14:49:15,183 | INFO     | 
[2025-02-25 09:49:27] 2025-02-25 14:49:15,184 | INFO     | architecture information:
[2025-02-25 09:49:27] 2025-02-25 14:49:15,184 | INFO     | executing command: cat /etc/os-release
[2025-02-25 09:49:27] 2025-02-25 14:49:15,198 | INFO     | cat /etc/os-release:
[2025-02-25 09:49:27] NAME="CentOS Linux"
[2025-02-25 09:49:27] VERSION="7 (Core)"
[2025-02-25 09:49:27] ID="centos"
[2025-02-25 09:49:27] ID_LIKE="rhel fedora"
[2025-02-25 09:49:27] VERSION_ID="7"
[2025-02-25 09:49:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 09:49:27] ANSI_COLOR="0;31"
[2025-02-25 09:49:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 09:49:27] HOME_URL="https://www.centos.org/"
[2025-02-25 09:49:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 09:49:27] 
[2025-02-25 09:49:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 09:49:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 09:49:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 09:49:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 09:49:27] 
[2025-02-25 09:49:27] 2025-02-25 14:49:15,198 | INFO     | **************************************
[2025-02-25 09:49:27] 2025-02-25 14:49:15,701 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-25 09:49:27] 2025-02-25 14:49:15,718 | INFO     | sufficient remaining disk space (29350690816 B)
[2025-02-25 09:49:27] 2025-02-25 14:49:15,718 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 09:49:27] 2025-02-25 14:49:15,718 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 09:49:27] 2025-02-25 14:49:15,719 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 09:49:27] 2025-02-25 14:49:15,719 | INFO     | aborting loop
[2025-02-25 09:49:27] 2025-02-25 14:49:15,719 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-25 09:49:27] 2025-02-25 14:49:15,719 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 09:49:27] 2025-02-25 14:49:15,720 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 09:49:27] 2025-02-25 14:49:15,720 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 09:49:27] 2025-02-25 14:49:15,720 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 09:49:27] 2025-02-25 14:49:16,458 | INFO     | all data control threads have been joined
[2025-02-25 09:49:27] 2025-02-25 14:49:16,552 | INFO     | all job control threads have been joined
[2025-02-25 09:49:27] 2025-02-25 14:49:16,683 | INFO     | all payload control threads have been joined
[2025-02-25 09:49:27] 2025-02-25 14:49:16,720 | INFO     | [job] retrieve thread has finished
[2025-02-25 09:49:27] 2025-02-25 14:49:16,724 | INFO     | [job] job monitor thread has finished
[2025-02-25 09:49:27] 2025-02-25 14:49:16,744 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 09:49:27] 2025-02-25 14:49:16,790 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 09:49:27] 2025-02-25 14:49:17,119 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 09:49:27] 2025-02-25 14:49:17,441 | INFO     | [payload] validate_post thread has finished
[2025-02-25 09:49:27] 2025-02-25 14:49:17,463 | INFO     | [data] control thread has finished
[2025-02-25 09:49:27] 2025-02-25 14:49:17,544 | INFO     | [data] copytool_in thread has finished
[2025-02-25 09:49:27] 2025-02-25 14:49:17,558 | INFO     | [job] control thread has finished
[2025-02-25 09:49:27] 2025-02-25 14:49:17,663 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 09:49:27] 2025-02-25 14:49:17,689 | INFO     | [payload] control thread has finished
[2025-02-25 09:49:27] 2025-02-25 14:49:17,725 | INFO     | [data] copytool_out thread has finished
[2025-02-25 09:49:27] 2025-02-25 14:49:17,739 | INFO     | [payload] failed_post thread has finished
[2025-02-25 09:49:27] 2025-02-25 14:49:18,061 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 09:49:27] 2025-02-25 14:49:18,164 | INFO     | [job] validate thread has finished
[2025-02-25 09:49:27] 2025-02-25 14:49:18,704 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 09:49:27] 2025-02-25 14:49:19,709 | INFO     | [job] queue monitor thread has finished
[2025-02-25 09:49:27] 2025-02-25 14:49:21,669 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 09:49:27] 2025-02-25 14:49:21,977 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140162132162368)>', '<ExcThread(monitor, started 140161383900928)>']
[2025-02-25 09:49:27] 2025-02-25 14:49:22,756 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 09:49:27] 2025-02-25 14:49:22,756 | INFO     | [monitor] control thread has ended
[2025-02-25 09:49:27] 2025-02-25 14:49:26,979 | INFO     | all workflow threads have been joined
[2025-02-25 09:49:27] 2025-02-25 14:49:26,979 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 09:49:27] 2025-02-25 14:49:26,979 | INFO     | traces error code: 0
[2025-02-25 09:49:27] 2025-02-25 14:49:26,979 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 09:49:27] 2025-02-25 14:49:27,068 [wrapper] ==== pilot stdout END ====
[2025-02-25 09:49:27] 2025-02-25 14:49:27,072 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 09:49:27] 2025-02-25 14:49:27,076 [wrapper] pilotpid: 22971
[2025-02-25 09:49:27] 2025-02-25 14:49:27,079 [wrapper] Pilot exit status: 0
[2025-02-25 09:49:27] 2025-02-25 14:49:27,094 [wrapper] pandaids: 6530322670
[2025-02-25 09:49:27] 2025-02-25 14:49:27,131 [wrapper] cleanup supervisor_pilot  5722 22972
[2025-02-25 09:49:27] 2025-02-25 14:49:27,135 [wrapper] Test setup, not cleaning
[2025-02-25 09:49:27] 2025-02-25 14:49:27,143 [wrapper] apfmon messages muted
[2025-02-25 09:49:27] 2025-02-25 14:49:27,146 [wrapper] ==== wrapper stdout END ====
[2025-02-25 09:49:27] 2025-02-25 14:49:27,150 [wrapper] ==== wrapper stderr END ====
[2025-02-25 09:49:27]  *** Error codes and diagnostics ***
[2025-02-25 09:49:27]     "exeErrorCode": 0,
[2025-02-25 09:49:27]     "exeErrorDiag": "",
[2025-02-25 09:49:27]     "pilotErrorCode": 0,
[2025-02-25 09:49:27]     "pilotErrorDiag": "",
[2025-02-25 09:49:27]  *** Listing of results directory ***
[2025-02-25 09:49:27] total 438224
[2025-02-25 09:49:27] -rw-r--r-- 1 boincer umatlas    491065 Feb 25 08:14 pilot3.tar.gz
[2025-02-25 09:49:27] -rw-r--r-- 1 boincer umatlas      5118 Feb 25 08:19 queuedata.json
[2025-02-25 09:49:27] -rwx------ 1 boincer umatlas     35865 Feb 25 08:19 runpilot2-wrapper.sh
[2025-02-25 09:49:27] -rw-r--r-- 1 boincer umatlas       100 Feb 25 08:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 09:49:27] -rwxr-xr-x 1 boincer umatlas      7986 Feb 25 08:28 run_atlas
[2025-02-25 09:49:27] -rw-r--r-- 1 boincer umatlas       105 Feb 25 08:28 job.xml
[2025-02-25 09:49:27] -rw-r--r-- 2 boincer umatlas 256868886 Feb 25 08:28 EVNT.43401135._000037.pool.root.1
[2025-02-25 09:49:27] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 08:28 start_atlas.sh
[2025-02-25 09:49:27] drwxrwx--x 2 boincer umatlas      4096 Feb 25 08:28 shared
[2025-02-25 09:49:27] -rw-r--r-- 2 boincer umatlas    503551 Feb 25 08:28 input.tar.gz
[2025-02-25 09:49:27] -rw-r--r-- 1 boincer umatlas         0 Feb 25 08:28 boinc_lockfile
[2025-02-25 09:49:27] -rw-r--r-- 1 boincer umatlas      2556 Feb 25 08:28 pandaJob.out
[2025-02-25 09:49:27] -rw------- 1 boincer umatlas       424 Feb 25 08:28 setup.sh.local
[2025-02-25 09:49:27] -rw------- 1 boincer umatlas    988274 Feb 25 08:28 agis_schedconf.cvmfs.json
[2025-02-25 09:49:27] -rw------- 1 boincer umatlas   1577983 Feb 25 08:28 agis_ddmendpoints.agis.ALL.json
[2025-02-25 09:49:27] drwx------ 4 boincer umatlas      4096 Feb 25 08:28 pilot3
[2025-02-25 09:49:27] -rw-r--r-- 1 boincer umatlas      5868 Feb 25 09:40 init_data.xml
[2025-02-25 09:49:27] -rw------- 1 boincer umatlas 186409446 Feb 25 09:48 HITS.43401137._000821.pool.root.1
[2025-02-25 09:49:27] -rw------- 1 boincer umatlas        95 Feb 25 09:48 pilot_heartbeat.json
[2025-02-25 09:49:27] -rw-r--r-- 1 boincer umatlas       529 Feb 25 09:48 boinc_task_state.xml
[2025-02-25 09:49:27] -rw------- 1 boincer umatlas      1044 Feb 25 09:49 memory_monitor_summary.json
[2025-02-25 09:49:27] -rw------- 1 boincer umatlas    375576 Feb 25 09:49 log.43401137._000821.job.log.tgz.1
[2025-02-25 09:49:27] -rw------- 1 boincer umatlas      7758 Feb 25 09:49 heartbeat.json
[2025-02-25 09:49:27] -rw-r--r-- 1 boincer umatlas      8192 Feb 25 09:49 boinc_mmap_file
[2025-02-25 09:49:27] -rw-r--r-- 1 boincer umatlas        27 Feb 25 09:49 wrapper_checkpoint.txt
[2025-02-25 09:49:27] -rw------- 1 boincer umatlas      4338 Feb 25 09:49 pilotlog.txt
[2025-02-25 09:49:27] -rw------- 1 boincer umatlas    453059 Feb 25 09:49 log.43401137._000821.job.log.1
[2025-02-25 09:49:27] -rw------- 1 boincer umatlas       357 Feb 25 09:49 output.list
[2025-02-25 09:49:27] -rw-r--r-- 1 boincer umatlas       620 Feb 25 09:49 runtime_log
[2025-02-25 09:49:27] -rw------- 1 boincer umatlas    849920 Feb 25 09:49 result.tar.gz
[2025-02-25 09:49:27] -rw-r--r-- 1 boincer umatlas     11015 Feb 25 09:49 runtime_log.err
[2025-02-25 09:49:27] -rw------- 1 boincer umatlas       658 Feb 25 09:49 RF1MDmR1966n9Rq4apOajLDm4fhM0noT9bVoFjIUDm0dfKDmBc6fCo.diag
[2025-02-25 09:49:27] -rw-r--r-- 1 boincer umatlas     21595 Feb 25 09:49 stderr.txt
[2025-02-25 09:49:27] HITS file was successfully produced:
[2025-02-25 09:49:27] -rw------- 1 boincer umatlas 186409446 Feb 25 09:48 shared/HITS.pool.root.1
[2025-02-25 09:49:27]  *** Contents of shared directory: ***
[2025-02-25 09:49:27] total 434244
[2025-02-25 09:49:27] -rw-r--r-- 2 boincer umatlas 256868886 Feb 25 08:28 ATLAS.root_0
[2025-02-25 09:49:27] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 08:28 start_atlas.sh
[2025-02-25 09:49:27] -rw-r--r-- 2 boincer umatlas    503551 Feb 25 08:28 input.tar.gz
[2025-02-25 09:49:27] -rw------- 1 boincer umatlas 186409446 Feb 25 09:48 HITS.pool.root.1
[2025-02-25 09:49:27] -rw------- 1 boincer umatlas    849920 Feb 25 09:49 result.tar.gz
09:49:28 (19302): run_atlas exited; CPU time 44668.414656
09:49:28 (19302): called boinc_finish(0)

</stderr_txt>
]]>

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