Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:23:58 (22982): wrapper (7.7.26015): starting
08:23:58 (22982): wrapper: running run_atlas (--nthreads 12)
[2025-02-25 08:23:58] Arguments: --nthreads 12
[2025-02-25 08:23:58] Threads: 12
[2025-02-25 08:23:58] Checking for CVMFS
[2025-02-25 08:23:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 08:23:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 08:23:59] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 08:23:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 08:23:59] 2.11.2.0 10995 118038 137256 143040 3 55 14163200 20275201 1 130560 0 24064139 99.985 7789874 40890 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-25 08:23:59] CVMFS is ok
[2025-02-25 08:23:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 08:23:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 08:23:59] Further information can be found at the LHC@home message board.
[2025-02-25 08:23:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 08:23:59] Checking for apptainer binary...
[2025-02-25 08:23:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 08:23:59] Running /usr/bin/apptainer --version
[2025-02-25 08:23:59] apptainer version 1.3.2-1.el7
[2025-02-25 08:23:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 08:24:00] c-205-22.aglt2.org
[2025-02-25 08:24:00] apptainer works
[2025-02-25 08:24:00] Set ATHENA_PROC_NUMBER=12
[2025-02-25 08:24:00] Set ATHENA_CORE_NUMBER=12
[2025-02-25 08:24:00] Starting ATLAS job with PandaID=6530322770
[2025-02-25 08:24:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 09:48:26]  *** The last 200 lines of the pilot log: ***
[2025-02-25 09:48:26]  is_altstaged=None
[2025-02-25 09:48:26]  is_tar=False
[2025-02-25 09:48:26]  lfn=log.43401137._000921.job.log.tgz.1
[2025-02-25 09:48:26]  mtime=0
[2025-02-25 09:48:26]  protocol_id=None
[2025-02-25 09:48:26]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-25 09:48:26]  replicas=None
[2025-02-25 09:48:26]  scope=mc23_13p6TeV
[2025-02-25 09:48:26]  status=None
[2025-02-25 09:48:26]  status_code=0
[2025-02-25 09:48:26]  storage_token=
[2025-02-25 09:48:26]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6530322770/log.43401137._000921.job.log.tgz.1
[2025-02-25 09:48:26]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/af/6e/log.43401137._000921.job.log.tgz.1
[2025-02-25 09:48:26]  workdir=None
[2025-02-25 09:48:26] ]
[2025-02-25 09:48:26] 2025-02-25 14:47:58,033 | INFO     | transferring file log.43401137._000921.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6530322770/log.43401137._000921.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-02-25 09:48:26] 2025-02-25 14:47:58,033 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6530322770/log.43401137._000921.job.log.tgz.1 /tmp/boinchome/slots/0/log.43401137._000921.job
[2025-02-25 09:48:26] 2025-02-25 14:47:58,056 | INFO     | adding to output.list: log.43401137._000921.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/af/6e/log.43401137._000921.job.log.tg
[2025-02-25 09:48:26] 2025-02-25 14:47:58,057 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-25 09:48:26] 2025-02-25 14:47:58,057 | INFO     | summary of transferred files:
[2025-02-25 09:48:26] 2025-02-25 14:47:58,057 | INFO     |  -- lfn=log.43401137._000921.job.log.tgz.1, status_code=0, status=transferred
[2025-02-25 09:48:26] 2025-02-25 14:47:58,057 | INFO     | stage-out finished correctly
[2025-02-25 09:48:26] 2025-02-25 14:47:58,169 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-25 09:48:26] 2025-02-25 14:47:59,957 | INFO     | monitor loop #368: job 0:6530322770 is in state 'finished'
[2025-02-25 09:48:26] 2025-02-25 14:47:59,957 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 09:48:26] 2025-02-25 14:48:00,138 | INFO     | job 6530322770 has state=finished
[2025-02-25 09:48:26] 2025-02-25 14:48:00,138 | INFO     | preparing for final server update for job 6530322770 in state='finished'
[2025-02-25 09:48:26] 2025-02-25 14:48:00,139 | INFO     | this job has now completed (state=finished)
[2025-02-25 09:48:26] 2025-02-25 14:48:00,139 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-25 09:48:26] 2025-02-25 14:48:00,139 | INFO     | log transfer has been attempted: DONE
[2025-02-25 09:48:26] 2025-02-25 14:48:00,139 | INFO     | job 6530322770 has finished - writing final server update
[2025-02-25 09:48:26] 2025-02-25 14:48:00,140 | INFO     | total number of processed events: 400 (read)
[2025-02-25 09:48:26] 2025-02-25 14:48:00,141 | INFO     | executing command: lscpu
[2025-02-25 09:48:26] 2025-02-25 14:48:00,167 | INFO     | found 12 cores (6 cores per socket, 2 sockets)
[2025-02-25 09:48:26] 2025-02-25 14:48:00,182 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-25 09:48:26] 2025-02-25 14:48:02,460 | INFO     | monitor loop #369: job 0:6530322770 is in state 'finished'
[2025-02-25 09:48:26] 2025-02-25 14:48:02,460 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 09:48:26] 2025-02-25 14:48:04,963 | INFO     | monitor loop #370: job 0:6530322770 is in state 'finished'
[2025-02-25 09:48:26] 2025-02-25 14:48:04,963 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 09:48:26] 2025-02-25 14:48:05,918 | INFO     | CPU arch script returned: x86-64-v2
[2025-02-25 09:48:26] 2025-02-25 14:48:05,919 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6530322770/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 09:48:26] 2025-02-25 14:48:05,920 | INFO     | extracted standard info from prmon json
[2025-02-25 09:48:26] 2025-02-25 14:48:05,920 | INFO     | extracted standard memory fields from prmon json
[2025-02-25 09:48:26] 2025-02-25 14:48:05,920 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-25 09:48:26] 2025-02-25 14:48:05,921 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 09:48:26] 2025-02-25 14:48:05,921 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 09:48:26] 2025-02-25 14:48:05,923 | INFO     | fitting pss+swap vs Time
[2025-02-25 09:48:26] 2025-02-25 14:48:05,924 | INFO     | model: linear, x: [1740490187.0, 1740490248.0, 1740490309.0, 1740490370.0, 1740490431.0, 1740490492.0, 1740490553.0, 1740490614.0, 1740490675.0, 1740490736.0, 1740
[2025-02-25 09:48:26] 2025-02-25 14:48:05,924 | INFO     | sum of square deviations: 130793150.0
[2025-02-25 09:48:26] 2025-02-25 14:48:05,924 | INFO     | sum of deviations: 18059773764.999992
[2025-02-25 09:48:26] 2025-02-25 14:48:05,925 | INFO     | mean x: 1740492444.0
[2025-02-25 09:48:26] 2025-02-25 14:48:05,925 | INFO     | mean y: 2675652.5866666664
[2025-02-25 09:48:26] 2025-02-25 14:48:05,925 | INFO     | -- intersect: -240322599626.21744
[2025-02-25 09:48:26] 2025-02-25 14:48:05,925 | INFO     | intersect: -240322599626.21744
[2025-02-25 09:48:26] 2025-02-25 14:48:05,926 | INFO     | chi2: 2.4816680845998
[2025-02-25 09:48:26] 2025-02-25 14:48:05,926 | INFO     | -- intersect: -240322599626.21744
[2025-02-25 09:48:26] 2025-02-25 14:48:05,926 | INFO     | current memory leak: 138.08 B/s (using 75 data points, chi2=2.48)
[2025-02-25 09:48:26] 2025-02-25 14:48:05,926 | INFO     | ..............................
[2025-02-25 09:48:26] 2025-02-25 14:48:05,926 | INFO     | . Timing measurements:
[2025-02-25 09:48:26] 2025-02-25 14:48:05,926 | INFO     | . get job = 0 s
[2025-02-25 09:48:26] 2025-02-25 14:48:05,927 | INFO     | . initial setup = 2 s
[2025-02-25 09:48:26] 2025-02-25 14:48:05,927 | INFO     | . payload setup = 7 s
[2025-02-25 09:48:26] 2025-02-25 14:48:05,927 | INFO     | . stage-in = 0 s
[2025-02-25 09:48:26] 2025-02-25 14:48:05,927 | INFO     | . payload execution = 4996 s
[2025-02-25 09:48:26] 2025-02-25 14:48:05,927 | INFO     | . stage-out = 0 s
[2025-02-25 09:48:26] 2025-02-25 14:48:05,927 | INFO     | . log creation = 0 s
[2025-02-25 09:48:26] 2025-02-25 14:48:05,927 | INFO     | ..............................
[2025-02-25 09:48:26] 2025-02-25 14:48:06,008 | INFO     | 
[2025-02-25 09:48:26] 2025-02-25 14:48:06,008 | INFO     | job summary report
[2025-02-25 09:48:26] 2025-02-25 14:48:06,009 | INFO     | --------------------------------------------------
[2025-02-25 09:48:26] 2025-02-25 14:48:06,009 | INFO     | PanDA job id: 6530322770
[2025-02-25 09:48:26] 2025-02-25 14:48:06,009 | INFO     | task id: 43401137
[2025-02-25 09:48:26] 2025-02-25 14:48:06,009 | INFO     | errors: (none)
[2025-02-25 09:48:26] 2025-02-25 14:48:06,009 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 09:48:26] 2025-02-25 14:48:06,010 | INFO     | pilot state: finished 
[2025-02-25 09:48:26] 2025-02-25 14:48:06,010 | INFO     | transexitcode: 0
[2025-02-25 09:48:26] 2025-02-25 14:48:06,010 | INFO     | exeerrorcode: 0
[2025-02-25 09:48:26] 2025-02-25 14:48:06,010 | INFO     | exeerrordiag: 
[2025-02-25 09:48:26] 2025-02-25 14:48:06,010 | INFO     | exitcode: 0
[2025-02-25 09:48:26] 2025-02-25 14:48:06,010 | INFO     | exitmsg: OK
[2025-02-25 09:48:26] 2025-02-25 14:48:06,011 | INFO     | cpuconsumptiontime: 47415 s
[2025-02-25 09:48:26] 2025-02-25 14:48:06,011 | INFO     | nevents: 400
[2025-02-25 09:48:26] 2025-02-25 14:48:06,011 | INFO     | neventsw: 0
[2025-02-25 09:48:26] 2025-02-25 14:48:06,011 | INFO     | pid: 601
[2025-02-25 09:48:26] 2025-02-25 14:48:06,011 | INFO     | pgrp: 601
[2025-02-25 09:48:26] 2025-02-25 14:48:06,011 | INFO     | corecount: 12
[2025-02-25 09:48:26] 2025-02-25 14:48:06,011 | INFO     | event service: False
[2025-02-25 09:48:26] 2025-02-25 14:48:06,012 | INFO     | sizes: {0: 2376956, 5: 2377162, 11: 2377218, 5008: 2403297, 5009: 2412322, 5017: 2412436}
[2025-02-25 09:48:26] 2025-02-25 14:48:06,012 | INFO     | --------------------------------------------------
[2025-02-25 09:48:26] 2025-02-25 14:48:06,012 | INFO     | 
[2025-02-25 09:48:26] 2025-02-25 14:48:06,012 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-25 09:48:26] 2025-02-25 14:48:06,035 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 09:48:26] 2025-02-25 14:48:06,035 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 09:48:26] 2025-02-25 14:48:06,035 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 09:48:26] 2025-02-25 14:48:06,036 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 09:48:26] 2025-02-25 14:48:06,036 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 09:48:26] 2025-02-25 14:48:06,036 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 09:48:26] 2025-02-25 14:48:06,036 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 09:48:26] 2025-02-25 14:48:06,036 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 09:48:26] 2025-02-25 14:48:06,036 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 09:48:26] 2025-02-25 14:48:06,037 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 09:48:26] 2025-02-25 14:48:06,037 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 09:48:26] 2025-02-25 14:48:06,037 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 09:48:26] 2025-02-25 14:48:06,037 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 09:48:26] 2025-02-25 14:48:06,037 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 09:48:26] 2025-02-25 14:48:06,038 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 09:48:26] 2025-02-25 14:48:06,038 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 09:48:26] 2025-02-25 14:48:06,038 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 09:48:26] 2025-02-25 14:48:06,038 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 09:48:26] 2025-02-25 14:48:06,038 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 09:48:26] 2025-02-25 14:48:06,038 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 09:48:26] 2025-02-25 14:48:06,039 | INFO     | job 6530322770 has completed (purged errors)
[2025-02-25 09:48:26] 2025-02-25 14:48:06,039 | INFO     | overall cleanup function is called
[2025-02-25 09:48:26] 2025-02-25 14:48:07,047 | INFO     | --- collectZombieJob: --- 10, [601]
[2025-02-25 09:48:26] 2025-02-25 14:48:07,048 | INFO     | zombie collector waiting for pid 601
[2025-02-25 09:48:26] 2025-02-25 14:48:07,052 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 09:48:26] 2025-02-25 14:48:07,052 | INFO     | collected zombie processes
[2025-02-25 09:48:26] 2025-02-25 14:48:07,052 | INFO     | will attempt to kill all subprocesses of pid=601
[2025-02-25 09:48:26] 2025-02-25 14:48:07,118 | INFO     | process IDs to be killed: [601] (in reverse order)
[2025-02-25 09:48:26] 2025-02-25 14:48:07,168 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 09:48:26] 2025-02-25 14:48:07,169 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 09:48:26] 2025-02-25 14:48:07,173 | INFO     | did not find any defunct processes belonging to 601
[2025-02-25 09:48:26] 2025-02-25 14:48:07,176 | INFO     | did not find any defunct processes belonging to 601
[2025-02-25 09:48:26] 2025-02-25 14:48:07,176 | INFO     | ready for new job
[2025-02-25 09:48:26] 2025-02-25 14:48:07,176 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 09:48:26] 2025-02-25 14:48:07,177 | INFO     | **************************************
[2025-02-25 09:48:26] 2025-02-25 14:48:07,177 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 09:48:26] 2025-02-25 14:48:07,178 | INFO     | **************************************
[2025-02-25 09:48:26] 2025-02-25 14:48:07,178 | INFO     | 
[2025-02-25 09:48:26] 2025-02-25 14:48:07,178 | INFO     | architecture information:
[2025-02-25 09:48:26] 2025-02-25 14:48:07,179 | INFO     | executing command: cat /etc/os-release
[2025-02-25 09:48:26] 2025-02-25 14:48:07,193 | INFO     | cat /etc/os-release:
[2025-02-25 09:48:26] NAME="CentOS Linux"
[2025-02-25 09:48:26] VERSION="7 (Core)"
[2025-02-25 09:48:26] ID="centos"
[2025-02-25 09:48:26] ID_LIKE="rhel fedora"
[2025-02-25 09:48:26] VERSION_ID="7"
[2025-02-25 09:48:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 09:48:26] ANSI_COLOR="0;31"
[2025-02-25 09:48:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 09:48:26] HOME_URL="https://www.centos.org/"
[2025-02-25 09:48:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 09:48:26] 
[2025-02-25 09:48:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 09:48:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 09:48:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 09:48:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 09:48:26] 
[2025-02-25 09:48:26] 2025-02-25 14:48:07,194 | INFO     | **************************************
[2025-02-25 09:48:26] 2025-02-25 14:48:07,604 | INFO     | PID=26679 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-02-25 09:48:26] 2025-02-25 14:48:07,697 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-25 09:48:26] 2025-02-25 14:48:07,715 | INFO     | sufficient remaining disk space (29354885120 B)
[2025-02-25 09:48:26] 2025-02-25 14:48:07,715 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 09:48:26] 2025-02-25 14:48:07,715 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 09:48:26] 2025-02-25 14:48:07,716 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-25 09:48:26] 2025-02-25 14:48:07,716 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 09:48:26] 2025-02-25 14:48:07,716 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 09:48:26] 2025-02-25 14:48:07,717 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 09:48:26] 2025-02-25 14:48:07,717 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 09:48:26] 2025-02-25 14:48:08,288 | INFO     | all data control threads have been joined
[2025-02-25 09:48:26] 2025-02-25 14:48:08,476 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 09:48:26] 2025-02-25 14:48:08,477 | INFO     | aborting loop
[2025-02-25 09:48:26] 2025-02-25 14:48:08,655 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 09:48:26] 2025-02-25 14:48:08,721 | INFO     | [job] retrieve thread has finished
[2025-02-25 09:48:26] 2025-02-25 14:48:08,722 | INFO     | [job] queue monitor thread has finished
[2025-02-25 09:48:26] 2025-02-25 14:48:08,757 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 09:48:26] 2025-02-25 14:48:08,760 | INFO     | [data] copytool_in thread has finished
[2025-02-25 09:48:26] 2025-02-25 14:48:08,895 | INFO     | [payload] failed_post thread has finished
[2025-02-25 09:48:26] 2025-02-25 14:48:08,896 | INFO     | all payload control threads have been joined
[2025-02-25 09:48:26] 2025-02-25 14:48:09,200 | INFO     | [job] validate thread has finished
[2025-02-25 09:48:26] 2025-02-25 14:48:09,222 | INFO     | all job control threads have been joined
[2025-02-25 09:48:26] 2025-02-25 14:48:09,293 | INFO     | [data] control thread has finished
[2025-02-25 09:48:26] 2025-02-25 14:48:09,382 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 09:48:26] 2025-02-25 14:48:09,465 | INFO     | [payload] validate_post thread has finished
[2025-02-25 09:48:26] 2025-02-25 14:48:09,482 | INFO     | [job] job monitor thread has finished
[2025-02-25 09:48:26] 2025-02-25 14:48:09,577 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 09:48:26] 2025-02-25 14:48:09,839 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 09:48:26] 2025-02-25 14:48:09,902 | INFO     | [payload] control thread has finished
[2025-02-25 09:48:26] 2025-02-25 14:48:10,227 | INFO     | [job] control thread has finished
[2025-02-25 09:48:26] 2025-02-25 14:48:10,656 | INFO     | [data] copytool_out thread has finished
[2025-02-25 09:48:26] 2025-02-25 14:48:12,763 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 09:48:26] 2025-02-25 14:48:17,957 | INFO     | job.realtimelogging is not enabled
[2025-02-25 09:48:26] 2025-02-25 14:48:18,962 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 09:48:26] 2025-02-25 14:48:20,723 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139912059475776)>', '<ExcThread(monitor, started 139911596316416)>']
[2025-02-25 09:48:26] 2025-02-25 14:48:20,781 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 09:48:26] 2025-02-25 14:48:20,781 | INFO     | [monitor] control thread has ended
[2025-02-25 09:48:26] 2025-02-25 14:48:25,748 | INFO     | all workflow threads have been joined
[2025-02-25 09:48:26] 2025-02-25 14:48:25,748 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 09:48:26] 2025-02-25 14:48:25,748 | INFO     | traces error code: 0
[2025-02-25 09:48:26] 2025-02-25 14:48:25,749 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 09:48:26] 2025-02-25 14:48:25,842 [wrapper] ==== pilot stdout END ====
[2025-02-25 09:48:26] 2025-02-25 14:48:25,846 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 09:48:26] 2025-02-25 14:48:25,850 [wrapper] pilotpid: 26679
[2025-02-25 09:48:26] 2025-02-25 14:48:25,854 [wrapper] Pilot exit status: 0
[2025-02-25 09:48:26] 2025-02-25 14:48:25,870 [wrapper] pandaids: 6530322770
[2025-02-25 09:48:26] 2025-02-25 14:48:25,908 [wrapper] cleanup supervisor_pilot 13912 26680
[2025-02-25 09:48:26] 2025-02-25 14:48:25,912 [wrapper] Test setup, not cleaning
[2025-02-25 09:48:26] 2025-02-25 14:48:25,920 [wrapper] apfmon messages muted
[2025-02-25 09:48:26] 2025-02-25 14:48:25,924 [wrapper] ==== wrapper stdout END ====
[2025-02-25 09:48:26] 2025-02-25 14:48:25,928 [wrapper] ==== wrapper stderr END ====
[2025-02-25 09:48:26]  *** Error codes and diagnostics ***
[2025-02-25 09:48:26]     "exeErrorCode": 0,
[2025-02-25 09:48:26]     "exeErrorDiag": "",
[2025-02-25 09:48:26]     "pilotErrorCode": 0,
[2025-02-25 09:48:26]     "pilotErrorDiag": "",
[2025-02-25 09:48:26]  *** Listing of results directory ***
[2025-02-25 09:48:26] total 433420
[2025-02-25 09:48:26] -rw-r--r-- 1 boincer umatlas    491065 Feb 25 08:14 pilot3.tar.gz
[2025-02-25 09:48:26] -rw-r--r-- 1 boincer umatlas      5118 Feb 25 08:19 queuedata.json
[2025-02-25 09:48:26] -rwx------ 1 boincer umatlas     35865 Feb 25 08:19 runpilot2-wrapper.sh
[2025-02-25 09:48:26] -rw-r--r-- 1 boincer umatlas       100 Feb 25 08:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 09:48:26] -rwxr-xr-x 1 boincer umatlas      7986 Feb 25 08:23 run_atlas
[2025-02-25 09:48:26] -rw-r--r-- 1 boincer umatlas       105 Feb 25 08:23 job.xml
[2025-02-25 09:48:26] -rw-r--r-- 2 boincer umatlas 253392049 Feb 25 08:23 EVNT.43401135._000050.pool.root.1
[2025-02-25 09:48:26] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 08:23 start_atlas.sh
[2025-02-25 09:48:26] drwxrwx--x 2 boincer umatlas      4096 Feb 25 08:23 shared
[2025-02-25 09:48:26] -rw-r--r-- 2 boincer umatlas    503548 Feb 25 08:23 input.tar.gz
[2025-02-25 09:48:26] -rw-r--r-- 1 boincer umatlas         0 Feb 25 08:23 boinc_lockfile
[2025-02-25 09:48:26] -rw-r--r-- 1 boincer umatlas      2556 Feb 25 08:24 pandaJob.out
[2025-02-25 09:48:26] -rw------- 1 boincer umatlas       424 Feb 25 08:24 setup.sh.local
[2025-02-25 09:48:26] -rw------- 1 boincer umatlas    988274 Feb 25 08:24 agis_schedconf.cvmfs.json
[2025-02-25 09:48:26] -rw------- 1 boincer umatlas   1577983 Feb 25 08:24 agis_ddmendpoints.agis.ALL.json
[2025-02-25 09:48:26] drwx------ 4 boincer umatlas      4096 Feb 25 08:24 pilot3
[2025-02-25 09:48:26] -rw-r--r-- 1 boincer umatlas      5869 Feb 25 09:36 init_data.xml
[2025-02-25 09:48:26] -rw------- 1 boincer umatlas        95 Feb 25 09:47 pilot_heartbeat.json
[2025-02-25 09:48:26] -rw------- 1 boincer umatlas 184944922 Feb 25 09:47 HITS.43401137._000921.pool.root.1
[2025-02-25 09:48:26] -rw-r--r-- 1 boincer umatlas       530 Feb 25 09:47 boinc_task_state.xml
[2025-02-25 09:48:26] -rw------- 1 boincer umatlas      1047 Feb 25 09:47 memory_monitor_summary.json
[2025-02-25 09:48:26] -rw------- 1 boincer umatlas    374946 Feb 25 09:47 log.43401137._000921.job.log.tgz.1
[2025-02-25 09:48:26] -rw------- 1 boincer umatlas      7761 Feb 25 09:48 heartbeat.json
[2025-02-25 09:48:26] -rw-r--r-- 1 boincer umatlas      8192 Feb 25 09:48 boinc_mmap_file
[2025-02-25 09:48:26] -rw-r--r-- 1 boincer umatlas        27 Feb 25 09:48 wrapper_checkpoint.txt
[2025-02-25 09:48:26] -rw------- 1 boincer umatlas      4727 Feb 25 09:48 pilotlog.txt
[2025-02-25 09:48:26] -rw------- 1 boincer umatlas    469297 Feb 25 09:48 log.43401137._000921.job.log.1
[2025-02-25 09:48:26] -rw------- 1 boincer umatlas       357 Feb 25 09:48 output.list
[2025-02-25 09:48:26] -rw-r--r-- 1 boincer umatlas       620 Feb 25 09:48 runtime_log
[2025-02-25 09:48:26] -rw------- 1 boincer umatlas    860160 Feb 25 09:48 result.tar.gz
[2025-02-25 09:48:26] -rw-r--r-- 1 boincer umatlas     11015 Feb 25 09:48 runtime_log.err
[2025-02-25 09:48:26] -rw------- 1 boincer umatlas       658 Feb 25 09:48 4dgMDmV1966nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmGTwKDmwOVWGo.diag
[2025-02-25 09:48:26] -rw-r--r-- 1 boincer umatlas     21602 Feb 25 09:48 stderr.txt
[2025-02-25 09:48:26] HITS file was successfully produced:
[2025-02-25 09:48:26] -rw------- 1 boincer umatlas 184944922 Feb 25 09:47 shared/HITS.pool.root.1
[2025-02-25 09:48:26]  *** Contents of shared directory: ***
[2025-02-25 09:48:26] total 429424
[2025-02-25 09:48:26] -rw-r--r-- 2 boincer umatlas 253392049 Feb 25 08:23 ATLAS.root_0
[2025-02-25 09:48:26] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 08:23 start_atlas.sh
[2025-02-25 09:48:26] -rw-r--r-- 2 boincer umatlas    503548 Feb 25 08:23 input.tar.gz
[2025-02-25 09:48:26] -rw------- 1 boincer umatlas 184944922 Feb 25 09:47 HITS.pool.root.1
[2025-02-25 09:48:26] -rw------- 1 boincer umatlas    860160 Feb 25 09:48 result.tar.gz
09:48:27 (22982): run_atlas exited; CPU time 47335.813187
09:48:27 (22982): called boinc_finish(0)

</stderr_txt>
]]>

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