Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:53:09 (2542664): wrapper (7.7.26015): starting
09:53:09 (2542664): wrapper: running run_atlas (--nthreads 9)
[2025-02-25 09:53:09] Arguments: --nthreads 9
[2025-02-25 09:53:09] Threads: 9
[2025-02-25 09:53:09] Checking for CVMFS
[2025-02-25 09:53:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 09:53:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 09:53:10] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 09:53:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 09:53:10] 2.11.5.0 3813485 16187 225612 143041 0 210 15815113 37641217 16443 130560 0 997877 97.517 5252111 37348 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-02-25 09:53:10] CVMFS is ok
[2025-02-25 09:53:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 09:53:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 09:53:10] Further information can be found at the LHC@home message board.
[2025-02-25 09:53:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 09:53:10] Checking for apptainer binary...
[2025-02-25 09:53:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 09:53:10] Running /usr/bin/apptainer --version
[2025-02-25 09:53:10] apptainer version 1.3.6-1.el9
[2025-02-25 09:53:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 09:53:10] c6-1-26-4.aglt2.org
[2025-02-25 09:53:10] apptainer works
[2025-02-25 09:53:10] Set ATHENA_PROC_NUMBER=9
[2025-02-25 09:53:10] Set ATHENA_CORE_NUMBER=9
[2025-02-25 09:53:10] Starting ATLAS job with PandaID=6530271681
[2025-02-25 09:53:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 11:25:15]  *** The last 200 lines of the pilot log: ***
[2025-02-25 11:25:15]  is_altstaged=None
[2025-02-25 11:25:15]  is_tar=False
[2025-02-25 11:25:15]  lfn=log.43401121._001723.job.log.tgz.1
[2025-02-25 11:25:15]  mtime=0
[2025-02-25 11:25:15]  protocol_id=None
[2025-02-25 11:25:15]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-25 11:25:15]  replicas=None
[2025-02-25 11:25:15]  scope=mc23_13p6TeV
[2025-02-25 11:25:15]  status=None
[2025-02-25 11:25:15]  status_code=0
[2025-02-25 11:25:15]  storage_token=
[2025-02-25 11:25:15]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6530271681/log.43401121._001723.job.log.tgz.1
[2025-02-25 11:25:15]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6d/86/log.43401121._001723.job.log.tgz.1
[2025-02-25 11:25:15]  workdir=None
[2025-02-25 11:25:15] ]
[2025-02-25 11:25:15] 2025-02-25 16:24:49,349 | INFO     | transferring file log.43401121._001723.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6530271681/log.43401121._001723.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-02-25 11:25:15] 2025-02-25 16:24:49,349 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6530271681/log.43401121._001723.job.log.tgz.1 /tmp/boinchome/slots/2/log.43401121._001723.job
[2025-02-25 11:25:15] 2025-02-25 16:24:49,364 | INFO     | adding to output.list: log.43401121._001723.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6d/86/log.43401121._001723.job.log.tg
[2025-02-25 11:25:15] 2025-02-25 16:24:49,365 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-25 11:25:15] 2025-02-25 16:24:49,365 | INFO     | summary of transferred files:
[2025-02-25 11:25:15] 2025-02-25 16:24:49,365 | INFO     |  -- lfn=log.43401121._001723.job.log.tgz.1, status_code=0, status=transferred
[2025-02-25 11:25:15] 2025-02-25 16:24:49,366 | INFO     | stage-out finished correctly
[2025-02-25 11:25:15] 2025-02-25 16:24:49,444 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-25 11:25:15] 2025-02-25 16:24:49,459 | INFO     | monitor loop #407: job 0:6530271681 is in state 'finished'
[2025-02-25 11:25:15] 2025-02-25 16:24:49,475 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 11:25:15] 2025-02-25 16:24:50,361 | INFO     | PID=2547077 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-02-25 11:25:15] 2025-02-25 16:24:50,361 | INFO     | .. there are 16 such processes running
[2025-02-25 11:25:15] 2025-02-25 16:24:51,958 | INFO     | job 6530271681 has state=finished
[2025-02-25 11:25:15] 2025-02-25 16:24:51,958 | INFO     | preparing for final server update for job 6530271681 in state='finished'
[2025-02-25 11:25:15] 2025-02-25 16:24:51,958 | INFO     | this job has now completed (state=finished)
[2025-02-25 11:25:15] 2025-02-25 16:24:51,958 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-25 11:25:15] 2025-02-25 16:24:51,959 | INFO     | log transfer has been attempted: DONE
[2025-02-25 11:25:15] 2025-02-25 16:24:51,959 | INFO     | job 6530271681 has finished - writing final server update
[2025-02-25 11:25:15] 2025-02-25 16:24:51,959 | INFO     | total number of processed events: 400 (read)
[2025-02-25 11:25:15] 2025-02-25 16:24:51,974 | INFO     | executing command: lscpu
[2025-02-25 11:25:15] 2025-02-25 16:24:51,989 | INFO     | monitor loop #408: job 0:6530271681 is in state 'finished'
[2025-02-25 11:25:15] 2025-02-25 16:24:51,989 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 11:25:15] 2025-02-25 16:24:52,013 | INFO     | found 28 cores (14 cores per socket, 2 sockets)
[2025-02-25 11:25:15] 2025-02-25 16:24:52,050 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-25 11:25:15] 2025-02-25 16:24:54,492 | INFO     | monitor loop #409: job 0:6530271681 is in state 'finished'
[2025-02-25 11:25:15] 2025-02-25 16:24:54,492 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 11:25:15] 2025-02-25 16:24:55,784 | INFO     | CPU arch script returned: x86-64-v4
[2025-02-25 11:25:15] 2025-02-25 16:24:55,784 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6530271681/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 11:25:15] 2025-02-25 16:24:55,785 | INFO     | extracted standard info from prmon json
[2025-02-25 11:25:15] 2025-02-25 16:24:55,785 | INFO     | extracted standard memory fields from prmon json
[2025-02-25 11:25:15] 2025-02-25 16:24:55,785 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-25 11:25:15] 2025-02-25 16:24:55,786 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 11:25:15] 2025-02-25 16:24:55,786 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 11:25:15] 2025-02-25 16:24:55,788 | INFO     | fitting pss+swap vs Time
[2025-02-25 11:25:15] 2025-02-25 16:24:55,789 | INFO     | model: linear, x: [1740495530.0, 1740495591.0, 1740495652.0, 1740495713.0, 1740495774.0, 1740495835.0, 1740495896.0, 1740495957.0, 1740496018.0, 1740496079.0, 1740
[2025-02-25 11:25:15] 2025-02-25 16:24:55,789 | INFO     | sum of square deviations: 177275882.0
[2025-02-25 11:25:15] 2025-02-25 16:24:55,789 | INFO     | sum of deviations: 22406064452.0
[2025-02-25 11:25:15] 2025-02-25 16:24:55,789 | INFO     | mean x: 1740498031.0
[2025-02-25 11:25:15] 2025-02-25 16:24:55,789 | INFO     | mean y: 2214497.0722891567
[2025-02-25 11:25:15] 2025-02-25 16:24:55,790 | INFO     | -- intersect: -219980958742.28067
[2025-02-25 11:25:15] 2025-02-25 16:24:55,790 | INFO     | intersect: -219980958742.28067
[2025-02-25 11:25:15] 2025-02-25 16:24:55,790 | INFO     | chi2: 1.6368241585338865
[2025-02-25 11:25:15] 2025-02-25 16:24:55,790 | INFO     | -- intersect: -219980958742.28067
[2025-02-25 11:25:15] 2025-02-25 16:24:55,790 | INFO     | current memory leak: 126.39 B/s (using 83 data points, chi2=1.64)
[2025-02-25 11:25:15] 2025-02-25 16:24:55,791 | INFO     | ..............................
[2025-02-25 11:25:15] 2025-02-25 16:24:55,791 | INFO     | . Timing measurements:
[2025-02-25 11:25:15] 2025-02-25 16:24:55,791 | INFO     | . get job = 0 s
[2025-02-25 11:25:15] 2025-02-25 16:24:55,791 | INFO     | . initial setup = 2 s
[2025-02-25 11:25:15] 2025-02-25 16:24:55,791 | INFO     | . payload setup = 5 s
[2025-02-25 11:25:15] 2025-02-25 16:24:55,791 | INFO     | . stage-in = 0 s
[2025-02-25 11:25:15] 2025-02-25 16:24:55,791 | INFO     | . payload execution = 5462 s
[2025-02-25 11:25:15] 2025-02-25 16:24:55,791 | INFO     | . stage-out = 0 s
[2025-02-25 11:25:15] 2025-02-25 16:24:55,791 | INFO     | . log creation = 0 s
[2025-02-25 11:25:15] 2025-02-25 16:24:55,791 | INFO     | ..............................
[2025-02-25 11:25:15] 2025-02-25 16:24:55,883 | INFO     | 
[2025-02-25 11:25:15] 2025-02-25 16:24:55,884 | INFO     | job summary report
[2025-02-25 11:25:15] 2025-02-25 16:24:55,884 | INFO     | --------------------------------------------------
[2025-02-25 11:25:15] 2025-02-25 16:24:55,884 | INFO     | PanDA job id: 6530271681
[2025-02-25 11:25:15] 2025-02-25 16:24:55,884 | INFO     | task id: 43401121
[2025-02-25 11:25:15] 2025-02-25 16:24:55,884 | INFO     | errors: (none)
[2025-02-25 11:25:15] 2025-02-25 16:24:55,884 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 11:25:15] 2025-02-25 16:24:55,884 | INFO     | pilot state: finished 
[2025-02-25 11:25:15] 2025-02-25 16:24:55,885 | INFO     | transexitcode: 0
[2025-02-25 11:25:15] 2025-02-25 16:24:55,885 | INFO     | exeerrorcode: 0
[2025-02-25 11:25:15] 2025-02-25 16:24:55,885 | INFO     | exeerrordiag: 
[2025-02-25 11:25:15] 2025-02-25 16:24:55,885 | INFO     | exitcode: 0
[2025-02-25 11:25:15] 2025-02-25 16:24:55,885 | INFO     | exitmsg: OK
[2025-02-25 11:25:15] 2025-02-25 16:24:55,885 | INFO     | cpuconsumptiontime: 38092 s
[2025-02-25 11:25:15] 2025-02-25 16:24:55,885 | INFO     | nevents: 400
[2025-02-25 11:25:15] 2025-02-25 16:24:55,886 | INFO     | neventsw: 0
[2025-02-25 11:25:15] 2025-02-25 16:24:55,886 | INFO     | pid: 2556696
[2025-02-25 11:25:15] 2025-02-25 16:24:55,886 | INFO     | pgrp: 2556696
[2025-02-25 11:25:15] 2025-02-25 16:24:55,886 | INFO     | corecount: 9
[2025-02-25 11:25:15] 2025-02-25 16:24:55,886 | INFO     | event service: False
[2025-02-25 11:25:15] 2025-02-25 16:24:55,886 | INFO     | sizes: {0: 2376653, 1: 2376908, 5: 2377114, 12: 2377170, 5471: 2403712, 5472: 2403711, 5474: 2412892, 5480: 2413006}
[2025-02-25 11:25:15] 2025-02-25 16:24:55,886 | INFO     | --------------------------------------------------
[2025-02-25 11:25:15] 2025-02-25 16:24:55,886 | INFO     | 
[2025-02-25 11:25:15] 2025-02-25 16:24:55,887 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-02-25 11:25:15] 2025-02-25 16:24:55,903 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 11:25:15] 2025-02-25 16:24:55,904 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 11:25:15] 2025-02-25 16:24:55,904 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 11:25:15] 2025-02-25 16:24:55,904 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 11:25:15] 2025-02-25 16:24:55,904 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 11:25:15] 2025-02-25 16:24:55,904 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 11:25:15] 2025-02-25 16:24:55,904 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 11:25:15] 2025-02-25 16:24:55,904 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 11:25:15] 2025-02-25 16:24:55,904 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 11:25:15] 2025-02-25 16:24:55,904 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 11:25:15] 2025-02-25 16:24:55,904 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 11:25:15] 2025-02-25 16:24:55,904 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 11:25:15] 2025-02-25 16:24:55,905 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 11:25:15] 2025-02-25 16:24:55,905 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 11:25:15] 2025-02-25 16:24:55,905 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 11:25:15] 2025-02-25 16:24:55,905 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 11:25:15] 2025-02-25 16:24:55,905 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 11:25:15] 2025-02-25 16:24:55,905 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 11:25:15] 2025-02-25 16:24:55,905 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 11:25:15] 2025-02-25 16:24:55,905 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 11:25:15] 2025-02-25 16:24:55,905 | INFO     | job 6530271681 has completed (purged errors)
[2025-02-25 11:25:15] 2025-02-25 16:24:55,905 | INFO     | overall cleanup function is called
[2025-02-25 11:25:15] 2025-02-25 16:24:56,914 | INFO     | --- collectZombieJob: --- 10, [2556696]
[2025-02-25 11:25:15] 2025-02-25 16:24:56,914 | INFO     | zombie collector waiting for pid 2556696
[2025-02-25 11:25:15] 2025-02-25 16:24:56,914 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 11:25:15] 2025-02-25 16:24:56,914 | INFO     | collected zombie processes
[2025-02-25 11:25:15] 2025-02-25 16:24:56,915 | INFO     | will attempt to kill all subprocesses of pid=2556696
[2025-02-25 11:25:15] 2025-02-25 16:24:57,027 | INFO     | process IDs to be killed: [2556696] (in reverse order)
[2025-02-25 11:25:15] 2025-02-25 16:24:57,099 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 11:25:15] 2025-02-25 16:24:57,100 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 11:25:15] 2025-02-25 16:24:57,112 | INFO     | did not find any defunct processes belonging to 2556696
[2025-02-25 11:25:15] 2025-02-25 16:24:57,125 | INFO     | did not find any defunct processes belonging to 2556696
[2025-02-25 11:25:15] 2025-02-25 16:24:57,125 | INFO     | ready for new job
[2025-02-25 11:25:15] 2025-02-25 16:24:57,125 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 11:25:15] 2025-02-25 16:24:57,128 | INFO     | **************************************
[2025-02-25 11:25:15] 2025-02-25 16:24:57,128 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 11:25:15] 2025-02-25 16:24:57,128 | INFO     | **************************************
[2025-02-25 11:25:15] 2025-02-25 16:24:57,128 | INFO     | 
[2025-02-25 11:25:15] 2025-02-25 16:24:57,143 | INFO     | architecture information:
[2025-02-25 11:25:15] 2025-02-25 16:24:57,143 | INFO     | executing command: cat /etc/os-release
[2025-02-25 11:25:15] 2025-02-25 16:24:57,162 | INFO     | cat /etc/os-release:
[2025-02-25 11:25:15] NAME="CentOS Linux"
[2025-02-25 11:25:15] VERSION="7 (Core)"
[2025-02-25 11:25:15] ID="centos"
[2025-02-25 11:25:15] ID_LIKE="rhel fedora"
[2025-02-25 11:25:15] VERSION_ID="7"
[2025-02-25 11:25:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 11:25:15] ANSI_COLOR="0;31"
[2025-02-25 11:25:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 11:25:15] HOME_URL="https://www.centos.org/"
[2025-02-25 11:25:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 11:25:15] 
[2025-02-25 11:25:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 11:25:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 11:25:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 11:25:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 11:25:15] 
[2025-02-25 11:25:15] 2025-02-25 16:24:57,163 | INFO     | **************************************
[2025-02-25 11:25:15] 2025-02-25 16:24:57,663 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-02-25 11:25:15] 2025-02-25 16:24:57,683 | INFO     | sufficient remaining disk space (63478693888 B)
[2025-02-25 11:25:15] 2025-02-25 16:24:57,683 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 11:25:15] 2025-02-25 16:24:57,684 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 11:25:15] 2025-02-25 16:24:57,684 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 11:25:15] 2025-02-25 16:24:57,684 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 11:25:15] 2025-02-25 16:24:57,891 | INFO     | all payload control threads have been joined
[2025-02-25 11:25:15] 2025-02-25 16:24:57,991 | INFO     | all job control threads have been joined
[2025-02-25 11:25:15] 2025-02-25 16:24:58,001 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 11:25:15] 2025-02-25 16:24:58,001 | INFO     | aborting loop
[2025-02-25 11:25:15] 2025-02-25 16:24:58,081 | INFO     | all data control threads have been joined
[2025-02-25 11:25:15] 2025-02-25 16:24:58,377 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 11:25:15] 2025-02-25 16:24:58,378 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 11:25:15] 2025-02-25 16:24:58,378 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 11:25:15] 2025-02-25 16:24:58,685 | INFO     | [job] retrieve thread has finished
[2025-02-25 11:25:15] 2025-02-25 16:24:58,689 | INFO     | [job] queue monitor thread has finished
[2025-02-25 11:25:15] 2025-02-25 16:24:58,749 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 11:25:15] 2025-02-25 16:24:58,751 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 11:25:15] 2025-02-25 16:24:58,795 | INFO     | [payload] failed_post thread has finished
[2025-02-25 11:25:15] 2025-02-25 16:24:58,896 | INFO     | [payload] control thread has finished
[2025-02-25 11:25:15] 2025-02-25 16:24:58,997 | INFO     | [job] control thread has finished
[2025-02-25 11:25:15] 2025-02-25 16:24:59,006 | INFO     | [job] job monitor thread has finished
[2025-02-25 11:25:15] 2025-02-25 16:24:59,086 | INFO     | [data] control thread has finished
[2025-02-25 11:25:15] 2025-02-25 16:24:59,181 | INFO     | [job] validate thread has finished
[2025-02-25 11:25:15] 2025-02-25 16:24:59,467 | INFO     | [data] copytool_in thread has finished
[2025-02-25 11:25:15] 2025-02-25 16:24:59,690 | INFO     | [data] copytool_out thread has finished
[2025-02-25 11:25:15] 2025-02-25 16:24:59,972 | INFO     | [payload] validate_post thread has finished
[2025-02-25 11:25:15] 2025-02-25 16:25:00,029 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 11:25:15] 2025-02-25 16:25:00,090 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 11:25:15] 2025-02-25 16:25:04,035 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 11:25:15] 2025-02-25 16:25:08,100 | INFO     | job.realtimelogging is not enabled
[2025-02-25 11:25:15] 2025-02-25 16:25:09,105 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 11:25:15] 2025-02-25 16:25:10,352 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139917305141056)>', '<ExcThread(monitor, started 139916537227008)>']
[2025-02-25 11:25:15] 2025-02-25 16:25:10,438 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 11:25:15] 2025-02-25 16:25:10,438 | INFO     | [monitor] control thread has ended
[2025-02-25 11:25:15] 2025-02-25 16:25:15,377 | INFO     | all workflow threads have been joined
[2025-02-25 11:25:15] 2025-02-25 16:25:15,378 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 11:25:15] 2025-02-25 16:25:15,378 | INFO     | traces error code: 0
[2025-02-25 11:25:15] 2025-02-25 16:25:15,378 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 11:25:15] 2025-02-25 16:25:15,515 [wrapper] ==== pilot stdout END ====
[2025-02-25 11:25:15] 2025-02-25 16:25:15,517 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 11:25:15] 2025-02-25 16:25:15,519 [wrapper] pilotpid: 2547077
[2025-02-25 11:25:15] 2025-02-25 16:25:15,520 [wrapper] Pilot exit status: 0
[2025-02-25 11:25:15] 2025-02-25 16:25:15,528 [wrapper] pandaids: 6530271681
[2025-02-25 11:25:15] 2025-02-25 16:25:15,582 [wrapper] cleanup supervisor_pilot 3240276 2547078
[2025-02-25 11:25:15] 2025-02-25 16:25:15,584 [wrapper] Test setup, not cleaning
[2025-02-25 11:25:15] 2025-02-25 16:25:15,588 [wrapper] apfmon messages muted
[2025-02-25 11:25:15] 2025-02-25 16:25:15,590 [wrapper] ==== wrapper stdout END ====
[2025-02-25 11:25:15] 2025-02-25 16:25:15,591 [wrapper] ==== wrapper stderr END ====
[2025-02-25 11:25:15]  *** Error codes and diagnostics ***
[2025-02-25 11:25:15]     "exeErrorCode": 0,
[2025-02-25 11:25:15]     "exeErrorDiag": "",
[2025-02-25 11:25:15]     "pilotErrorCode": 0,
[2025-02-25 11:25:15]     "pilotErrorDiag": "",
[2025-02-25 11:25:15]  *** Listing of results directory ***
[2025-02-25 11:25:15] total 436952
[2025-02-25 11:25:15] -rw-r--r--. 1 boincer umatlas    491065 Feb 25 07:34 pilot3.tar.gz
[2025-02-25 11:25:15] -rw-r--r--. 1 boincer umatlas      5118 Feb 25 07:43 queuedata.json
[2025-02-25 11:25:15] -rwx------. 1 boincer umatlas     35865 Feb 25 07:46 runpilot2-wrapper.sh
[2025-02-25 11:25:15] -rw-r--r--. 1 boincer umatlas       100 Feb 25 09:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 11:25:15] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 25 09:53 run_atlas
[2025-02-25 11:25:15] -rw-r--r--. 1 boincer umatlas       105 Feb 25 09:53 job.xml
[2025-02-25 11:25:15] -rw-r--r--. 2 boincer umatlas 256265705 Feb 25 09:53 EVNT.43401119._000005.pool.root.1
[2025-02-25 11:25:15] -rw-r--r--. 2 boincer umatlas     17569 Feb 25 09:53 start_atlas.sh
[2025-02-25 11:25:15] drwxrwx--x. 2 boincer umatlas      4096 Feb 25 09:53 shared
[2025-02-25 11:25:15] -rw-r--r--. 2 boincer umatlas    503557 Feb 25 09:53 input.tar.gz
[2025-02-25 11:25:15] -rw-r--r--. 1 boincer umatlas         0 Feb 25 09:53 boinc_lockfile
[2025-02-25 11:25:15] -rw-r--r--. 1 boincer umatlas      2533 Feb 25 09:53 pandaJob.out
[2025-02-25 11:25:15] -rw-------. 1 boincer umatlas       467 Feb 25 09:53 setup.sh.local
[2025-02-25 11:25:15] -rw-------. 1 boincer umatlas    988282 Feb 25 09:53 agis_schedconf.cvmfs.json
[2025-02-25 11:25:15] -rw-------. 1 boincer umatlas   1577983 Feb 25 09:53 agis_ddmendpoints.agis.ALL.json
[2025-02-25 11:25:15] drwx------. 4 boincer umatlas      4096 Feb 25 09:53 pilot3
[2025-02-25 11:25:15] -rw-r--r--. 1 boincer umatlas      6841 Feb 25 11:21 init_data.xml
[2025-02-25 11:25:15] -rw-------. 1 boincer umatlas 185633413 Feb 25 11:24 HITS.43401121._001723.pool.root.1
[2025-02-25 11:25:15] -rw-r--r--. 1 boincer umatlas       529 Feb 25 11:24 boinc_task_state.xml
[2025-02-25 11:25:15] -rw-------. 1 boincer umatlas        95 Feb 25 11:24 pilot_heartbeat.json
[2025-02-25 11:25:15] -rw-------. 1 boincer umatlas      1034 Feb 25 11:24 memory_monitor_summary.json
[2025-02-25 11:25:15] -rw-------. 1 boincer umatlas    331979 Feb 25 11:24 log.43401121._001723.job.log.tgz.1
[2025-02-25 11:25:15] -rw-------. 1 boincer umatlas      7716 Feb 25 11:24 heartbeat.json
[2025-02-25 11:25:15] -rw-r--r--. 1 boincer umatlas      8192 Feb 25 11:25 boinc_mmap_file
[2025-02-25 11:25:15] -rw-r--r--. 1 boincer umatlas        27 Feb 25 11:25 wrapper_checkpoint.txt
[2025-02-25 11:25:15] -rw-------. 1 boincer umatlas      4287 Feb 25 11:25 pilotlog.txt
[2025-02-25 11:25:15] -rw-------. 1 boincer umatlas    536178 Feb 25 11:25 log.43401121._001723.job.log.1
[2025-02-25 11:25:15] -rw-------. 1 boincer umatlas       357 Feb 25 11:25 output.list
[2025-02-25 11:25:15] -rw-r--r--. 1 boincer umatlas       620 Feb 25 11:25 runtime_log
[2025-02-25 11:25:15] -rw-------. 1 boincer umatlas    890880 Feb 25 11:25 result.tar.gz
[2025-02-25 11:25:15] -rw-r--r--. 1 boincer umatlas     11423 Feb 25 11:25 runtime_log.err
[2025-02-25 11:25:15] -rw-------. 1 boincer umatlas       653 Feb 25 11:25 Ae3NDmBV966nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmuQwKDmTgl1Kn.diag
[2025-02-25 11:25:15] -rw-r--r--. 1 boincer umatlas     21622 Feb 25 11:25 stderr.txt
[2025-02-25 11:25:15] HITS file was successfully produced:
[2025-02-25 11:25:15] -rw-------. 1 boincer umatlas 185633413 Feb 25 11:24 shared/HITS.pool.root.1
[2025-02-25 11:25:15]  *** Contents of shared directory: ***
[2025-02-25 11:25:15] total 432932
[2025-02-25 11:25:15] -rw-r--r--. 2 boincer umatlas 256265705 Feb 25 09:53 ATLAS.root_0
[2025-02-25 11:25:15] -rw-r--r--. 2 boincer umatlas     17569 Feb 25 09:53 start_atlas.sh
[2025-02-25 11:25:15] -rw-r--r--. 2 boincer umatlas    503557 Feb 25 09:53 input.tar.gz
[2025-02-25 11:25:15] -rw-------. 1 boincer umatlas 185633413 Feb 25 11:24 HITS.pool.root.1
[2025-02-25 11:25:15] -rw-------. 1 boincer umatlas    890880 Feb 25 11:25 result.tar.gz
11:25:17 (2542664): run_atlas exited; CPU time 38039.870952
11:25:17 (2542664): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN