Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:54:15 (3467829): wrapper (7.7.26015): starting
13:54:15 (3467829): wrapper: running run_atlas (--nthreads 12)
[2025-02-25 13:54:15] Arguments: --nthreads 12
[2025-02-25 13:54:15] Threads: 12
[2025-02-25 13:54:15] Checking for CVMFS
[2025-02-25 13:54:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 13:54:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 13:54:16] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 13:54:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 13:54:16] 2.11.5.0 4047 49068 246532 143052 1 487 43053927 45568001 12285 130560 0 241090285 99.641 266184768 23125 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-02-25 13:54:16] CVMFS is ok
[2025-02-25 13:54:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 13:54:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 13:54:16] Further information can be found at the LHC@home message board.
[2025-02-25 13:54:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 13:54:16] Checking for apptainer binary...
[2025-02-25 13:54:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 13:54:16] Running /usr/bin/apptainer --version
[2025-02-25 13:54:16] apptainer version 1.3.5-1.el9
[2025-02-25 13:54:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 13:54:16] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0089.triumf.lcg
[2025-02-25 13:54:16] apptainer works
[2025-02-25 13:54:16] Set ATHENA_PROC_NUMBER=12
[2025-02-25 13:54:16] Set ATHENA_CORE_NUMBER=12
[2025-02-25 13:54:16] Starting ATLAS job with PandaID=6530237263
[2025-02-25 13:54:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 15:11:53]  *** The last 200 lines of the pilot log: ***
[2025-02-25 15:11:53]  is_altstaged=None
[2025-02-25 15:11:53]  is_tar=False
[2025-02-25 15:11:53]  lfn=log.43401163._000066.job.log.tgz.1
[2025-02-25 15:11:53]  mtime=0
[2025-02-25 15:11:53]  protocol_id=None
[2025-02-25 15:11:53]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-25 15:11:53]  replicas=None
[2025-02-25 15:11:53]  scope=mc23_13p6TeV
[2025-02-25 15:11:53]  status=None
[2025-02-25 15:11:53]  status_code=0
[2025-02-25 15:11:53]  storage_token=
[2025-02-25 15:11:53]  surl=/home/boinc/slots/0/PanDA_Pilot-6530237263/log.43401163._000066.job.log.tgz.1
[2025-02-25 15:11:53]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/35/6d/log.43401163._000066.job.log.tgz.1
[2025-02-25 15:11:53]  workdir=None
[2025-02-25 15:11:53] ]
[2025-02-25 15:11:53] 2025-02-25 23:11:30,237 | INFO     | transferring file log.43401163._000066.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6530237263/log.43401163._000066.job.log.tgz.1 to /home/boinc/slots/0/log.
[2025-02-25 15:11:53] 2025-02-25 23:11:30,237 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6530237263/log.43401163._000066.job.log.tgz.1 /home/boinc/slots/0/log.43401163._000066.job.log.t
[2025-02-25 15:11:53] 2025-02-25 23:11:30,251 | INFO     | adding to output.list: log.43401163._000066.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/35/6d/log.43401163._000066.job.log.tg
[2025-02-25 15:11:53] 2025-02-25 23:11:30,252 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-25 15:11:53] 2025-02-25 23:11:30,252 | INFO     | summary of transferred files:
[2025-02-25 15:11:53] 2025-02-25 23:11:30,252 | INFO     |  -- lfn=log.43401163._000066.job.log.tgz.1, status_code=0, status=transferred
[2025-02-25 15:11:53] 2025-02-25 23:11:30,252 | INFO     | stage-out finished correctly
[2025-02-25 15:11:53] 2025-02-25 23:11:30,541 | INFO     | PID=3473681 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-02-25 15:11:53] 2025-02-25 23:11:30,542 | INFO     | .. there are 27 such processes running
[2025-02-25 15:11:53] 2025-02-25 23:11:32,253 | INFO     | monitor loop #343: job 0:6530237263 is in state 'finished'
[2025-02-25 15:11:53] 2025-02-25 23:11:32,254 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 15:11:53] 2025-02-25 23:11:33,777 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-25 15:11:53] 2025-02-25 23:11:34,757 | INFO     | monitor loop #344: job 0:6530237263 is in state 'finished'
[2025-02-25 15:11:53] 2025-02-25 23:11:34,757 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 15:11:53] 2025-02-25 23:11:36,252 | INFO     | job 6530237263 has state=finished
[2025-02-25 15:11:53] 2025-02-25 23:11:36,252 | INFO     | preparing for final server update for job 6530237263 in state='finished'
[2025-02-25 15:11:53] 2025-02-25 23:11:36,253 | INFO     | this job has now completed (state=finished)
[2025-02-25 15:11:53] 2025-02-25 23:11:36,253 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-25 15:11:53] 2025-02-25 23:11:36,253 | INFO     | log transfer has been attempted: DONE
[2025-02-25 15:11:53] 2025-02-25 23:11:36,253 | INFO     | job 6530237263 has finished - writing final server update
[2025-02-25 15:11:53] 2025-02-25 23:11:36,253 | INFO     | total number of processed events: 400 (read)
[2025-02-25 15:11:53] 2025-02-25 23:11:36,256 | INFO     | executing command: lscpu
[2025-02-25 15:11:53] 2025-02-25 23:11:36,293 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2025-02-25 15:11:53] 2025-02-25 23:11:36,307 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-25 15:11:53] 2025-02-25 23:11:37,260 | INFO     | monitor loop #345: job 0:6530237263 is in state 'finished'
[2025-02-25 15:11:53] 2025-02-25 23:11:37,260 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 15:11:53] 2025-02-25 23:11:39,461 | INFO     | CPU arch script returned: x86-64-v4
[2025-02-25 15:11:53] 2025-02-25 23:11:39,461 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6530237263/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 15:11:53] 2025-02-25 23:11:39,462 | INFO     | extracted standard info from prmon json
[2025-02-25 15:11:53] 2025-02-25 23:11:39,462 | INFO     | extracted standard memory fields from prmon json
[2025-02-25 15:11:53] 2025-02-25 23:11:39,462 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-25 15:11:53] 2025-02-25 23:11:39,462 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 15:11:53] 2025-02-25 23:11:39,462 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 15:11:53] 2025-02-25 23:11:39,464 | INFO     | fitting pss+swap vs Time
[2025-02-25 15:11:53] 2025-02-25 23:11:39,464 | INFO     | model: linear, x: [1740520817.0, 1740520878.0, 1740520939.0, 1740521000.0, 1740521061.0, 1740521122.0, 1740521183.0, 1740521244.0, 1740521305.0, 1740521366.0, 1740
[2025-02-25 15:11:53] 2025-02-25 23:11:39,464 | INFO     | sum of square deviations: 97479406.76470585
[2025-02-25 15:11:53] 2025-02-25 23:11:39,464 | INFO     | sum of deviations: 18028301399.08823
[2025-02-25 15:11:53] 2025-02-25 23:11:39,464 | INFO     | mean x: 1740522860.5588236
[2025-02-25 15:11:53] 2025-02-25 23:11:39,464 | INFO     | mean y: 2644042.6029411764
[2025-02-25 15:11:53] 2025-02-25 23:11:39,464 | INFO     | -- intersect: -321897865650.6802
[2025-02-25 15:11:53] 2025-02-25 23:11:39,464 | INFO     | intersect: -321897865650.6802
[2025-02-25 15:11:53] 2025-02-25 23:11:39,465 | INFO     | chi2: 2.1969506747812386
[2025-02-25 15:11:53] 2025-02-25 23:11:39,465 | INFO     | -- intersect: -321897865650.6802
[2025-02-25 15:11:53] 2025-02-25 23:11:39,465 | INFO     | current memory leak: 184.94 B/s (using 68 data points, chi2=2.20)
[2025-02-25 15:11:53] 2025-02-25 23:11:39,465 | INFO     | ..............................
[2025-02-25 15:11:53] 2025-02-25 23:11:39,465 | INFO     | . Timing measurements:
[2025-02-25 15:11:53] 2025-02-25 23:11:39,465 | INFO     | . get job = 0 s
[2025-02-25 15:11:53] 2025-02-25 23:11:39,465 | INFO     | . initial setup = 3 s
[2025-02-25 15:11:53] 2025-02-25 23:11:39,465 | INFO     | . payload setup = 9 s
[2025-02-25 15:11:53] 2025-02-25 23:11:39,465 | INFO     | . stage-in = 0 s
[2025-02-25 15:11:53] 2025-02-25 23:11:39,465 | INFO     | . payload execution = 4584 s
[2025-02-25 15:11:53] 2025-02-25 23:11:39,465 | INFO     | . stage-out = 0 s
[2025-02-25 15:11:53] 2025-02-25 23:11:39,465 | INFO     | . log creation = 0 s
[2025-02-25 15:11:53] 2025-02-25 23:11:39,465 | INFO     | ..............................
[2025-02-25 15:11:53] 2025-02-25 23:11:39,520 | INFO     | 
[2025-02-25 15:11:53] 2025-02-25 23:11:39,520 | INFO     | job summary report
[2025-02-25 15:11:53] 2025-02-25 23:11:39,520 | INFO     | --------------------------------------------------
[2025-02-25 15:11:53] 2025-02-25 23:11:39,520 | INFO     | PanDA job id: 6530237263
[2025-02-25 15:11:53] 2025-02-25 23:11:39,520 | INFO     | task id: 43401163
[2025-02-25 15:11:53] 2025-02-25 23:11:39,520 | INFO     | errors: (none)
[2025-02-25 15:11:53] 2025-02-25 23:11:39,520 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 15:11:53] 2025-02-25 23:11:39,520 | INFO     | pilot state: finished 
[2025-02-25 15:11:53] 2025-02-25 23:11:39,521 | INFO     | transexitcode: 0
[2025-02-25 15:11:53] 2025-02-25 23:11:39,521 | INFO     | exeerrorcode: 0
[2025-02-25 15:11:53] 2025-02-25 23:11:39,521 | INFO     | exeerrordiag: 
[2025-02-25 15:11:53] 2025-02-25 23:11:39,521 | INFO     | exitcode: 0
[2025-02-25 15:11:53] 2025-02-25 23:11:39,521 | INFO     | exitmsg: OK
[2025-02-25 15:11:53] 2025-02-25 23:11:39,521 | INFO     | cpuconsumptiontime: 26108 s
[2025-02-25 15:11:53] 2025-02-25 23:11:39,521 | INFO     | nevents: 400
[2025-02-25 15:11:53] 2025-02-25 23:11:39,521 | INFO     | neventsw: 0
[2025-02-25 15:11:53] 2025-02-25 23:11:39,521 | INFO     | pid: 3485095
[2025-02-25 15:11:53] 2025-02-25 23:11:39,521 | INFO     | pgrp: 3485095
[2025-02-25 15:11:53] 2025-02-25 23:11:39,521 | INFO     | corecount: 12
[2025-02-25 15:11:53] 2025-02-25 23:11:39,521 | INFO     | event service: False
[2025-02-25 15:11:53] 2025-02-25 23:11:39,521 | INFO     | sizes: {0: 2370377, 6: 2370583, 11: 2370611, 4598: 2405485, 4602: 2405485, 4607: 2405655}
[2025-02-25 15:11:53] 2025-02-25 23:11:39,521 | INFO     | --------------------------------------------------
[2025-02-25 15:11:53] 2025-02-25 23:11:39,521 | INFO     | 
[2025-02-25 15:11:53] 2025-02-25 23:11:39,521 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-02-25 15:11:53] 2025-02-25 23:11:39,536 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 15:11:53] 2025-02-25 23:11:39,536 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 15:11:53] 2025-02-25 23:11:39,536 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 15:11:53] 2025-02-25 23:11:39,536 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 15:11:53] 2025-02-25 23:11:39,536 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 15:11:53] 2025-02-25 23:11:39,537 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 15:11:53] 2025-02-25 23:11:39,537 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 15:11:53] 2025-02-25 23:11:39,537 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 15:11:53] 2025-02-25 23:11:39,537 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 15:11:53] 2025-02-25 23:11:39,537 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 15:11:53] 2025-02-25 23:11:39,537 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 15:11:53] 2025-02-25 23:11:39,537 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 15:11:53] 2025-02-25 23:11:39,537 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 15:11:53] 2025-02-25 23:11:39,537 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 15:11:53] 2025-02-25 23:11:39,537 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 15:11:53] 2025-02-25 23:11:39,537 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 15:11:53] 2025-02-25 23:11:39,537 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 15:11:53] 2025-02-25 23:11:39,537 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 15:11:53] 2025-02-25 23:11:39,537 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 15:11:53] 2025-02-25 23:11:39,537 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 15:11:53] 2025-02-25 23:11:39,537 | INFO     | job 6530237263 has completed (purged errors)
[2025-02-25 15:11:53] 2025-02-25 23:11:39,537 | INFO     | overall cleanup function is called
[2025-02-25 15:11:53] 2025-02-25 23:11:40,542 | INFO     | --- collectZombieJob: --- 10, [3485095]
[2025-02-25 15:11:53] 2025-02-25 23:11:40,542 | INFO     | zombie collector waiting for pid 3485095
[2025-02-25 15:11:53] 2025-02-25 23:11:40,542 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 15:11:53] 2025-02-25 23:11:40,543 | INFO     | collected zombie processes
[2025-02-25 15:11:53] 2025-02-25 23:11:40,543 | INFO     | will attempt to kill all subprocesses of pid=3485095
[2025-02-25 15:11:53] 2025-02-25 23:11:40,637 | INFO     | process IDs to be killed: [3485095] (in reverse order)
[2025-02-25 15:11:53] 2025-02-25 23:11:40,709 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 15:11:53] 2025-02-25 23:11:40,709 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 15:11:53] 2025-02-25 23:11:40,717 | INFO     | did not find any defunct processes belonging to 3485095
[2025-02-25 15:11:53] 2025-02-25 23:11:40,725 | INFO     | did not find any defunct processes belonging to 3485095
[2025-02-25 15:11:53] 2025-02-25 23:11:40,725 | INFO     | ready for new job
[2025-02-25 15:11:53] 2025-02-25 23:11:40,725 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 15:11:53] 2025-02-25 23:11:40,726 | INFO     | **************************************
[2025-02-25 15:11:53] 2025-02-25 23:11:40,726 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 15:11:53] 2025-02-25 23:11:40,726 | INFO     | **************************************
[2025-02-25 15:11:53] 2025-02-25 23:11:40,726 | INFO     | 
[2025-02-25 15:11:53] 2025-02-25 23:11:40,728 | INFO     | architecture information:
[2025-02-25 15:11:53] 2025-02-25 23:11:40,728 | INFO     | executing command: cat /etc/os-release
[2025-02-25 15:11:53] 2025-02-25 23:11:40,741 | INFO     | cat /etc/os-release:
[2025-02-25 15:11:53] NAME="CentOS Linux"
[2025-02-25 15:11:53] VERSION="7 (Core)"
[2025-02-25 15:11:53] ID="centos"
[2025-02-25 15:11:53] ID_LIKE="rhel fedora"
[2025-02-25 15:11:53] VERSION_ID="7"
[2025-02-25 15:11:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 15:11:53] ANSI_COLOR="0;31"
[2025-02-25 15:11:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 15:11:53] HOME_URL="https://www.centos.org/"
[2025-02-25 15:11:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 15:11:53] 
[2025-02-25 15:11:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 15:11:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 15:11:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 15:11:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 15:11:53] 
[2025-02-25 15:11:53] 2025-02-25 23:11:40,741 | INFO     | **************************************
[2025-02-25 15:11:53] 2025-02-25 23:11:41,244 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-02-25 15:11:53] 2025-02-25 23:11:41,257 | INFO     | sufficient remaining disk space (1750992945152 B)
[2025-02-25 15:11:53] 2025-02-25 23:11:41,257 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 15:11:53] 2025-02-25 23:11:41,257 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 15:11:53] 2025-02-25 23:11:41,257 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 15:11:53] 2025-02-25 23:11:41,257 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 15:11:53] 2025-02-25 23:11:41,257 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-25 15:11:53] 2025-02-25 23:11:41,258 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 15:11:53] 2025-02-25 23:11:41,258 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 15:11:53] 2025-02-25 23:11:41,258 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 15:11:53] 2025-02-25 23:11:41,257 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 15:11:53] 2025-02-25 23:11:41,258 | INFO     | aborting loop
[2025-02-25 15:11:53] 2025-02-25 23:11:41,295 | INFO     | all data control threads have been joined
[2025-02-25 15:11:53] 2025-02-25 23:11:41,753 | INFO     | all job control threads have been joined
[2025-02-25 15:11:53] 2025-02-25 23:11:41,849 | INFO     | all payload control threads have been joined
[2025-02-25 15:11:53] 2025-02-25 23:11:42,262 | INFO     | [job] retrieve thread has finished
[2025-02-25 15:11:53] 2025-02-25 23:11:42,263 | INFO     | [job] job monitor thread has finished
[2025-02-25 15:11:53] 2025-02-25 23:11:42,266 | INFO     | [job] queue monitor thread has finished
[2025-02-25 15:11:53] 2025-02-25 23:11:42,296 | INFO     | [data] control thread has finished
[2025-02-25 15:11:53] 2025-02-25 23:11:42,490 | INFO     | [payload] failed_post thread has finished
[2025-02-25 15:11:53] 2025-02-25 23:11:42,621 | INFO     | [job] validate thread has finished
[2025-02-25 15:11:53] 2025-02-25 23:11:42,646 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 15:11:53] 2025-02-25 23:11:42,758 | INFO     | [job] control thread has finished
[2025-02-25 15:11:53] 2025-02-25 23:11:42,857 | INFO     | [payload] control thread has finished
[2025-02-25 15:11:53] 2025-02-25 23:11:42,915 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 15:11:53] 2025-02-25 23:11:43,265 | INFO     | [data] copytool_out thread has finished
[2025-02-25 15:11:53] 2025-02-25 23:11:43,446 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 15:11:53] 2025-02-25 23:11:43,471 | INFO     | [data] copytool_in thread has finished
[2025-02-25 15:11:53] 2025-02-25 23:11:43,519 | INFO     | [payload] validate_post thread has finished
[2025-02-25 15:11:53] 2025-02-25 23:11:43,645 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 15:11:53] 2025-02-25 23:11:44,340 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 15:11:53] 2025-02-25 23:11:48,347 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 15:11:53] 2025-02-25 23:11:48,363 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140094840387392)>', '<ExcThread(monitor, started 140093637519104)>']
[2025-02-25 15:11:53] 2025-02-25 23:11:49,308 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 15:11:53] 2025-02-25 23:11:49,308 | INFO     | [monitor] control thread has ended
[2025-02-25 15:11:53] 2025-02-25 23:11:53,388 | INFO     | all workflow threads have been joined
[2025-02-25 15:11:53] 2025-02-25 23:11:53,389 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 15:11:53] 2025-02-25 23:11:53,389 | INFO     | traces error code: 0
[2025-02-25 15:11:53] 2025-02-25 23:11:53,389 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 15:11:53] 2025-02-25 23:11:53,539 [wrapper] ==== pilot stdout END ====
[2025-02-25 15:11:53] 2025-02-25 23:11:53,541 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 15:11:53] 2025-02-25 23:11:53,544 [wrapper] pilotpid: 3473681
[2025-02-25 15:11:53] 2025-02-25 23:11:53,545 [wrapper] Pilot exit status: 0
[2025-02-25 15:11:53] 2025-02-25 23:11:53,553 [wrapper] pandaids: 6530237263
[2025-02-25 15:11:53] 2025-02-25 23:11:53,599 [wrapper] cleanup supervisor_pilot 3931451 3473682
[2025-02-25 15:11:53] 2025-02-25 23:11:53,601 [wrapper] Test setup, not cleaning
[2025-02-25 15:11:53] 2025-02-25 23:11:53,605 [wrapper] apfmon messages muted
[2025-02-25 15:11:53] 2025-02-25 23:11:53,606 [wrapper] ==== wrapper stdout END ====
[2025-02-25 15:11:53] 2025-02-25 23:11:53,608 [wrapper] ==== wrapper stderr END ====
[2025-02-25 15:11:53]  *** Error codes and diagnostics ***
[2025-02-25 15:11:53]     "exeErrorCode": 0,
[2025-02-25 15:11:53]     "exeErrorDiag": "",
[2025-02-25 15:11:53]     "pilotErrorCode": 0,
[2025-02-25 15:11:53]     "pilotErrorDiag": "",
[2025-02-25 15:11:53]  *** Listing of results directory ***
[2025-02-25 15:11:53] total 428692
[2025-02-25 15:11:53] -rw-r--r--. 1 boinc boinc    491065 Feb 25 04:15 pilot3.tar.gz
[2025-02-25 15:11:53] -rw-r--r--. 1 boinc boinc      5118 Feb 25 04:31 queuedata.json
[2025-02-25 15:11:53] -rwx------. 1 boinc boinc     35865 Feb 25 04:31 runpilot2-wrapper.sh
[2025-02-25 15:11:53] -rw-r--r--. 1 boinc boinc       100 Feb 25 13:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 15:11:53] -rwxr-xr-x. 1 boinc boinc      7986 Feb 25 13:54 run_atlas
[2025-02-25 15:11:53] -rw-r--r--. 1 boinc boinc       105 Feb 25 13:54 job.xml
[2025-02-25 15:11:53] -rw-r--r--. 1 boinc boinc      6603 Feb 25 13:54 init_data.xml
[2025-02-25 15:11:53] -rw-r--r--. 2 boinc boinc 251332435 Feb 25 13:54 EVNT.43401161._000003.pool.root.1
[2025-02-25 15:11:53] -rw-r--r--. 2 boinc boinc     17569 Feb 25 13:54 start_atlas.sh
[2025-02-25 15:11:53] drwxrwx--x. 2 boinc boinc      4096 Feb 25 13:54 shared
[2025-02-25 15:11:53] -rw-r--r--. 2 boinc boinc    503544 Feb 25 13:54 input.tar.gz
[2025-02-25 15:11:53] -rw-r--r--. 1 boinc boinc         0 Feb 25 13:54 boinc_lockfile
[2025-02-25 15:11:53] -rw-r--r--. 1 boinc boinc      2543 Feb 25 13:54 pandaJob.out
[2025-02-25 15:11:53] -rw-------. 1 boinc boinc       424 Feb 25 13:54 setup.sh.local
[2025-02-25 15:11:53] -rw-------. 1 boinc boinc    987482 Feb 25 13:54 agis_schedconf.cvmfs.json
[2025-02-25 15:11:53] -rw-------. 1 boinc boinc   1573632 Feb 25 13:54 agis_ddmendpoints.agis.ALL.json
[2025-02-25 15:11:53] drwx------. 4 boinc boinc      4096 Feb 25 13:54 pilot3
[2025-02-25 15:11:53] -rw-------. 1 boinc boinc 182209194 Feb 25 15:11 HITS.43401163._000066.pool.root.1
[2025-02-25 15:11:53] -rw-r--r--. 1 boinc boinc       529 Feb 25 15:11 boinc_task_state.xml
[2025-02-25 15:11:53] -rw-------. 1 boinc boinc      1044 Feb 25 15:11 memory_monitor_summary.json
[2025-02-25 15:11:53] -rw-------. 1 boinc boinc    367809 Feb 25 15:11 log.43401163._000066.job.log.tgz.1
[2025-02-25 15:11:53] -rw-------. 1 boinc boinc      7738 Feb 25 15:11 heartbeat.json
[2025-02-25 15:11:53] -rw-------. 1 boinc boinc        95 Feb 25 15:11 pilot_heartbeat.json
[2025-02-25 15:11:53] -rw-r--r--. 1 boinc boinc        27 Feb 25 15:11 wrapper_checkpoint.txt
[2025-02-25 15:11:53] -rw-r--r--. 1 boinc boinc      8192 Feb 25 15:11 boinc_mmap_file
[2025-02-25 15:11:53] -rw-------. 1 boinc boinc      4337 Feb 25 15:11 pilotlog.txt
[2025-02-25 15:11:53] -rw-------. 1 boinc boinc    452864 Feb 25 15:11 log.43401163._000066.job.log.1
[2025-02-25 15:11:53] -rw-------. 1 boinc boinc       357 Feb 25 15:11 output.list
[2025-02-25 15:11:53] -rw-r--r--. 1 boinc boinc       620 Feb 25 15:11 runtime_log
[2025-02-25 15:11:53] -rw-------. 1 boinc boinc    839680 Feb 25 15:11 result.tar.gz
[2025-02-25 15:11:53] -rw-r--r--. 1 boinc boinc     11144 Feb 25 15:11 runtime_log.err
[2025-02-25 15:11:53] -rw-------. 1 boinc boinc       659 Feb 25 15:11 mhCLDmIH966n9Rq4apOajLDm4fhM0noT9bVoFjIUDmQZfKDmr1NC3m.diag
[2025-02-25 15:11:53] -rw-r--r--. 1 boinc boinc     21815 Feb 25 15:11 stderr.txt
[2025-02-25 15:11:53] HITS file was successfully produced:
[2025-02-25 15:11:53] -rw-------. 1 boinc boinc 182209194 Feb 25 15:11 shared/HITS.pool.root.1
[2025-02-25 15:11:53]  *** Contents of shared directory: ***
[2025-02-25 15:11:53] total 424724
[2025-02-25 15:11:53] -rw-r--r--. 2 boinc boinc 251332435 Feb 25 13:54 ATLAS.root_0
[2025-02-25 15:11:53] -rw-r--r--. 2 boinc boinc     17569 Feb 25 13:54 start_atlas.sh
[2025-02-25 15:11:53] -rw-r--r--. 2 boinc boinc    503544 Feb 25 13:54 input.tar.gz
[2025-02-25 15:11:53] -rw-------. 1 boinc boinc 182209194 Feb 25 15:11 HITS.pool.root.1
[2025-02-25 15:11:53] -rw-------. 1 boinc boinc    839680 Feb 25 15:11 result.tar.gz
15:11:55 (3467829): run_atlas exited; CPU time 26075.994460
15:11:55 (3467829): called boinc_finish(0)

</stderr_txt>
]]>

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