Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:20:15 (2944013): wrapper (7.7.26015): starting
05:20:15 (2944013): wrapper: running run_atlas (--nthreads 4)
[2025-02-27 05:20:15] Arguments: --nthreads 4
[2025-02-27 05:20:15] Threads: 4
[2025-02-27 05:20:15] Checking for CVMFS
[2025-02-27 05:20:15] No cvmfs_config command found, will try listing directly
[2025-02-27 05:20:15] CVMFS is ok
[2025-02-27 05:20:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-27 05:20:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-27 05:20:15] Further information can be found at the LHC@home message board.
[2025-02-27 05:20:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-27 05:20:15] Checking for apptainer binary...
[2025-02-27 05:20:15] which: no apptainer in ((null))
[2025-02-27 05:20:15] apptainer is not installed, using version from CVMFS
[2025-02-27 05:20:15] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-27 05:20:15] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot100/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2025-02-27 05:20:15] apptainer works
[2025-02-27 05:20:15] Set ATHENA_PROC_NUMBER=4
[2025-02-27 05:20:15] Set ATHENA_CORE_NUMBER=4
[2025-02-27 05:20:15] Starting ATLAS job with PandaID=6530099870
[2025-02-27 05:20:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot100/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-27 07:58:39]  *** The last 200 lines of the pilot log: ***
[2025-02-27 07:58:39] 2025-02-27 06:58:27,327 | INFO     | chi2: 4.283475272838553
[2025-02-27 07:58:39] 2025-02-27 06:58:27,327 | INFO     | current chi2=4.283475272838553 (change=0.09985907767005202 %)
[2025-02-27 07:58:39] 2025-02-27 06:58:27,327 | INFO     | right removable region: 149
[2025-02-27 07:58:39] 2025-02-27 06:58:27,327 | INFO     | model: linear, x: [1740630365.0, 1740630426.0, 1740630487.0, 1740630548.0, 1740630609.0, 1740630670.0, 1740630731.0, 1740630792.0, 1740630853.0, 1740630914.0, 1740
[2025-02-27 07:58:39] 2025-02-27 06:58:27,327 | INFO     | sum of square deviations: 1046484737.5
[2025-02-27 07:58:39] 2025-02-27 06:58:27,328 | INFO     | sum of deviations: 34501677531.0
[2025-02-27 07:58:39] 2025-02-27 06:58:27,328 | INFO     | mean x: 1740634909.5
[2025-02-27 07:58:39] 2025-02-27 06:58:27,328 | INFO     | mean y: 2282699.2
[2025-02-27 07:58:39] 2025-02-27 06:58:27,328 | INFO     | -- intersect: -57384912923.20187
[2025-02-27 07:58:39] 2025-02-27 06:58:27,328 | INFO     | intersect: -57384912923.20187
[2025-02-27 07:58:39] 2025-02-27 06:58:27,329 | INFO     | chi2: 1.6485220567334364
[2025-02-27 07:58:39] 2025-02-27 06:58:27,329 | INFO     | current chi2=1.6485220567334364 (change=61.55281044213776 %)
[2025-02-27 07:58:39] 2025-02-27 06:58:27,329 | INFO     | model: linear, x: [1740630670.0, 1740630731.0, 1740630792.0, 1740630853.0, 1740630914.0, 1740630975.0, 1740631036.0, 1740631097.0, 1740631158.0, 1740631219.0, 1740
[2025-02-27 07:58:39] 2025-02-27 06:58:27,329 | INFO     | sum of square deviations: 945282840.0
[2025-02-27 07:58:39] 2025-02-27 06:58:27,330 | INFO     | sum of deviations: 5685347254.000001
[2025-02-27 07:58:39] 2025-02-27 06:58:27,330 | INFO     | mean x: 1740635062.0
[2025-02-27 07:58:39] 2025-02-27 06:58:27,330 | INFO     | mean y: 2326136.275862069
[2025-02-27 07:58:39] 2025-02-27 06:58:27,330 | INFO     | -- intersect: -10466619613.292406
[2025-02-27 07:58:39] 2025-02-27 06:58:27,330 | INFO     | intersect: -10466619613.292406
[2025-02-27 07:58:39] 2025-02-27 06:58:27,330 | INFO     | chi2: 0.09660767745072034
[2025-02-27 07:58:39] 2025-02-27 06:58:27,331 | INFO     | current chi2=0.09660767745072034 (change=94.13974007468548 %)
[2025-02-27 07:58:39] 2025-02-27 06:58:27,331 | INFO     | model: linear, x: [1740630975.0, 1740631036.0, 1740631097.0, 1740631158.0, 1740631219.0, 1740631280.0, 1740631341.0, 1740631402.0, 1740631463.0, 1740631524.0, 1740
[2025-02-27 07:58:39] 2025-02-27 06:58:27,331 | INFO     | sum of square deviations: 850825255.0
[2025-02-27 07:58:39] 2025-02-27 06:58:27,332 | INFO     | sum of deviations: 255018857.00000003
[2025-02-27 07:58:39] 2025-02-27 06:58:27,332 | INFO     | mean x: 1740635214.5
[2025-02-27 07:58:39] 2025-02-27 06:58:27,332 | INFO     | mean y: 2334761.6285714284
[2025-02-27 07:58:39] 2025-02-27 06:58:27,332 | INFO     | -- intersect: -519387883.8231551
[2025-02-27 07:58:39] 2025-02-27 06:58:27,332 | INFO     | intersect: -519387883.8231551
[2025-02-27 07:58:39] 2025-02-27 06:58:27,332 | INFO     | chi2: 0.0007803046006443771
[2025-02-27 07:58:39] 2025-02-27 06:58:27,332 | INFO     | current chi2=0.0007803046006443771 (change=99.19229545597717 %)
[2025-02-27 07:58:39] 2025-02-27 06:58:27,333 | INFO     | model: linear, x: [1740631280.0, 1740631341.0, 1740631402.0, 1740631463.0, 1740631524.0, 1740631585.0, 1740631646.0, 1740631707.0, 1740631768.0, 1740631829.0, 1740
[2025-02-27 07:58:39] 2025-02-27 06:58:27,333 | INFO     | sum of square deviations: 762879420.0
[2025-02-27 07:58:39] 2025-02-27 06:58:27,334 | INFO     | sum of deviations: -132803222.00000001
[2025-02-27 07:58:39] 2025-02-27 06:58:27,334 | INFO     | mean x: 1740635367.0
[2025-02-27 07:58:39] 2025-02-27 06:58:27,334 | INFO     | mean y: 2335426.474074074
[2025-02-27 07:58:39] 2025-02-27 06:58:27,334 | INFO     | -- intersect: 305347906.56529546
[2025-02-27 07:58:39] 2025-02-27 06:58:27,334 | INFO     | intersect: 305347906.56529546
[2025-02-27 07:58:39] 2025-02-27 06:58:27,334 | INFO     | chi2: 0.00036271143164668724
[2025-02-27 07:58:39] 2025-02-27 06:58:27,334 | INFO     | current chi2=0.00036271143164668724 (change=53.51668677242715 %)
[2025-02-27 07:58:39] 2025-02-27 06:58:27,334 | INFO     | model: linear, x: [1740631585.0, 1740631646.0, 1740631707.0, 1740631768.0, 1740631829.0, 1740631890.0, 1740631951.0, 1740632012.0, 1740632073.0, 1740632134.0, 1740
[2025-02-27 07:58:39] 2025-02-27 06:58:27,335 | INFO     | sum of square deviations: 681212772.5
[2025-02-27 07:58:39] 2025-02-27 06:58:27,335 | INFO     | sum of deviations: -207281751.5
[2025-02-27 07:58:39] 2025-02-27 06:58:27,335 | INFO     | mean x: 1740635519.5
[2025-02-27 07:58:39] 2025-02-27 06:58:27,335 | INFO     | mean y: 2335566.453846154
[2025-02-27 07:58:39] 2025-02-27 06:58:27,336 | INFO     | -- intersect: 531982093.6041755
[2025-02-27 07:58:39] 2025-02-27 06:58:27,336 | INFO     | intersect: 531982093.6041755
[2025-02-27 07:58:39] 2025-02-27 06:58:27,336 | INFO     | chi2: 0.0003414156211061922
[2025-02-27 07:58:39] 2025-02-27 06:58:27,336 | INFO     | current chi2=0.0003414156211061922 (change=5.871281873806231 %)
[2025-02-27 07:58:39] 2025-02-27 06:58:27,336 | INFO     | left removable region: 50
[2025-02-27 07:58:39] 2025-02-27 06:58:27,336 | INFO     | model: linear, x: [1740633110.0, 1740633171.0, 1740633232.0, 1740633293.0, 1740633354.0, 1740633415.0, 1740633476.0, 1740633537.0, 1740633598.0, 1740633659.0, 1740
[2025-02-27 07:58:39] 2025-02-27 06:58:27,336 | INFO     | sum of square deviations: 300842850.0
[2025-02-27 07:58:39] 2025-02-27 06:58:27,337 | INFO     | sum of deviations: 291872800.0
[2025-02-27 07:58:39] 2025-02-27 06:58:27,337 | INFO     | mean x: 1740636099.0
[2025-02-27 07:58:39] 2025-02-27 06:58:27,337 | INFO     | mean y: 2334067.6767676766
[2025-02-27 07:58:39] 2025-02-27 06:58:27,337 | INFO     | -- intersect: -1686402533.496261
[2025-02-27 07:58:39] 2025-02-27 06:58:27,337 | INFO     | intersect: -1686402533.496261
[2025-02-27 07:58:39] 2025-02-27 06:58:27,337 | INFO     | chi2: 0.00010730695937903489
[2025-02-27 07:58:39] 2025-02-27 06:58:27,337 | INFO     | -- intersect: -1686402533.496261
[2025-02-27 07:58:39] 2025-02-27 06:58:27,338 | INFO     | current memory leak: 0.97 B/s (using 99 data points, chi2=0.00)
[2025-02-27 07:58:39] 2025-02-27 06:58:27,338 | INFO     | ..............................
[2025-02-27 07:58:39] 2025-02-27 06:58:27,338 | INFO     | . Timing measurements:
[2025-02-27 07:58:39] 2025-02-27 06:58:27,338 | INFO     | . get job = 0 s
[2025-02-27 07:58:39] 2025-02-27 06:58:27,338 | INFO     | . initial setup = 1 s
[2025-02-27 07:58:39] 2025-02-27 06:58:27,338 | INFO     | . payload setup = 7 s
[2025-02-27 07:58:39] 2025-02-27 06:58:27,338 | INFO     | . stage-in = 0 s
[2025-02-27 07:58:39] 2025-02-27 06:58:27,338 | INFO     | . payload execution = 9437 s
[2025-02-27 07:58:39] 2025-02-27 06:58:27,339 | INFO     | . stage-out = 0 s
[2025-02-27 07:58:39] 2025-02-27 06:58:27,339 | INFO     | . log creation = 0 s
[2025-02-27 07:58:39] 2025-02-27 06:58:27,339 | INFO     | ..............................
[2025-02-27 07:58:39] 2025-02-27 06:58:27,434 | INFO     | 
[2025-02-27 07:58:39] 2025-02-27 06:58:27,435 | INFO     | job summary report
[2025-02-27 07:58:39] 2025-02-27 06:58:27,435 | INFO     | --------------------------------------------------
[2025-02-27 07:58:39] 2025-02-27 06:58:27,435 | INFO     | PanDA job id: 6530099870
[2025-02-27 07:58:39] 2025-02-27 06:58:27,435 | INFO     | task id: 43401121
[2025-02-27 07:58:39] 2025-02-27 06:58:27,435 | INFO     | errors: (none)
[2025-02-27 07:58:39] 2025-02-27 06:58:27,436 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-27 07:58:39] 2025-02-27 06:58:27,436 | INFO     | pilot state: finished 
[2025-02-27 07:58:39] 2025-02-27 06:58:27,436 | INFO     | transexitcode: 0
[2025-02-27 07:58:39] 2025-02-27 06:58:27,436 | INFO     | exeerrorcode: 0
[2025-02-27 07:58:39] 2025-02-27 06:58:27,436 | INFO     | exeerrordiag: 
[2025-02-27 07:58:39] 2025-02-27 06:58:27,436 | INFO     | exitcode: 0
[2025-02-27 07:58:39] 2025-02-27 06:58:27,436 | INFO     | exitmsg: OK
[2025-02-27 07:58:39] 2025-02-27 06:58:27,436 | INFO     | cpuconsumptiontime: 34325 s
[2025-02-27 07:58:39] 2025-02-27 06:58:27,436 | INFO     | nevents: 400
[2025-02-27 07:58:39] 2025-02-27 06:58:27,436 | INFO     | neventsw: 0
[2025-02-27 07:58:39] 2025-02-27 06:58:27,436 | INFO     | pid: 2955523
[2025-02-27 07:58:39] 2025-02-27 06:58:27,436 | INFO     | pgrp: 2955523
[2025-02-27 07:58:39] 2025-02-27 06:58:27,437 | INFO     | corecount: 4
[2025-02-27 07:58:39] 2025-02-27 06:58:27,437 | INFO     | event service: False
[2025-02-27 07:58:39] 2025-02-27 06:58:27,437 | INFO     | sizes: {0: 2363663, 1: 2363862, 7: 2364068, 11: 2364096, 9449: 2392247, 9450: 2401212, 9453: 2401396, 9462: 2401566}
[2025-02-27 07:58:39] 2025-02-27 06:58:27,437 | INFO     | --------------------------------------------------
[2025-02-27 07:58:39] 2025-02-27 06:58:27,437 | INFO     | 
[2025-02-27 07:58:39] 2025-02-27 06:58:27,437 | INFO     | executing command: ls -lF /scratch/boinc/var/slot100/slots/0
[2025-02-27 07:58:39] 2025-02-27 06:58:27,470 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-27 07:58:39] 2025-02-27 06:58:27,470 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-27 07:58:39] 2025-02-27 06:58:27,470 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-27 07:58:39] 2025-02-27 06:58:27,471 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-27 07:58:39] 2025-02-27 06:58:27,471 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-27 07:58:39] 2025-02-27 06:58:27,471 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-27 07:58:39] 2025-02-27 06:58:27,471 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-27 07:58:39] 2025-02-27 06:58:27,471 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-27 07:58:39] 2025-02-27 06:58:27,471 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-27 07:58:39] 2025-02-27 06:58:27,471 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-27 07:58:39] 2025-02-27 06:58:27,471 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-27 07:58:39] 2025-02-27 06:58:27,471 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-27 07:58:39] 2025-02-27 06:58:27,471 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-27 07:58:39] 2025-02-27 06:58:27,471 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-27 07:58:39] 2025-02-27 06:58:27,472 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-27 07:58:39] 2025-02-27 06:58:27,472 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-27 07:58:39] 2025-02-27 06:58:27,472 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-27 07:58:39] 2025-02-27 06:58:27,472 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-27 07:58:39] 2025-02-27 06:58:27,472 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-27 07:58:39] 2025-02-27 06:58:27,472 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-27 07:58:39] 2025-02-27 06:58:27,472 | INFO     | job 6530099870 has completed (purged errors)
[2025-02-27 07:58:39] 2025-02-27 06:58:27,472 | INFO     | overall cleanup function is called
[2025-02-27 07:58:39] 2025-02-27 06:58:28,478 | INFO     | --- collectZombieJob: --- 10, [2955523]
[2025-02-27 07:58:39] 2025-02-27 06:58:28,478 | INFO     | zombie collector waiting for pid 2955523
[2025-02-27 07:58:39] 2025-02-27 06:58:28,479 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-27 07:58:39] 2025-02-27 06:58:28,479 | INFO     | collected zombie processes
[2025-02-27 07:58:39] 2025-02-27 06:58:28,479 | INFO     | will attempt to kill all subprocesses of pid=2955523
[2025-02-27 07:58:39] 2025-02-27 06:58:28,775 | INFO     | process IDs to be killed: [2955523] (in reverse order)
[2025-02-27 07:58:39] 2025-02-27 06:58:29,021 | WARNING  | found no corresponding commands to process id(s)
[2025-02-27 07:58:39] 2025-02-27 06:58:29,022 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-27 07:58:39] 2025-02-27 06:58:29,044 | INFO     | did not find any defunct processes belonging to 2955523
[2025-02-27 07:58:39] 2025-02-27 06:58:29,062 | INFO     | did not find any defunct processes belonging to 2955523
[2025-02-27 07:58:39] 2025-02-27 06:58:29,062 | INFO     | ready for new job
[2025-02-27 07:58:39] 2025-02-27 06:58:29,062 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-27 07:58:39] 2025-02-27 06:58:29,065 | INFO     | **************************************
[2025-02-27 07:58:39] 2025-02-27 06:58:29,065 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-27 07:58:39] 2025-02-27 06:58:29,065 | INFO     | **************************************
[2025-02-27 07:58:39] 2025-02-27 06:58:29,065 | INFO     | 
[2025-02-27 07:58:39] 2025-02-27 06:58:29,073 | INFO     | architecture information:
[2025-02-27 07:58:39] 2025-02-27 06:58:29,074 | INFO     | executing command: cat /etc/os-release
[2025-02-27 07:58:39] 2025-02-27 06:58:29,100 | INFO     | cat /etc/os-release:
[2025-02-27 07:58:39] NAME="CentOS Linux"
[2025-02-27 07:58:39] VERSION="7 (Core)"
[2025-02-27 07:58:39] ID="centos"
[2025-02-27 07:58:39] ID_LIKE="rhel fedora"
[2025-02-27 07:58:39] VERSION_ID="7"
[2025-02-27 07:58:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-27 07:58:39] ANSI_COLOR="0;31"
[2025-02-27 07:58:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-27 07:58:39] HOME_URL="https://www.centos.org/"
[2025-02-27 07:58:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-27 07:58:39] 
[2025-02-27 07:58:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-27 07:58:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-27 07:58:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-27 07:58:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-27 07:58:39] 
[2025-02-27 07:58:39] 2025-02-27 06:58:29,101 | INFO     | **************************************
[2025-02-27 07:58:39] 2025-02-27 06:58:29,604 | INFO     | executing command: df -mP /scratch/boinc/var/slot100/slots/0
[2025-02-27 07:58:39] 2025-02-27 06:58:29,630 | INFO     | sufficient remaining disk space (3355945467904 B)
[2025-02-27 07:58:39] 2025-02-27 06:58:29,630 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-27 07:58:39] 2025-02-27 06:58:29,630 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-27 07:58:39] 2025-02-27 06:58:29,631 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-27 07:58:39] 2025-02-27 06:58:29,631 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-27 07:58:39] 2025-02-27 06:58:29,632 | INFO     | found 0 job(s) in 20 queues
[2025-02-27 07:58:39] 2025-02-27 06:58:29,632 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-27 07:58:39] 2025-02-27 06:58:29,632 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-27 07:58:39] 2025-02-27 06:58:30,496 | INFO     | all data control threads have been joined
[2025-02-27 07:58:39] 2025-02-27 06:58:30,530 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-27 07:58:39] 2025-02-27 06:58:30,530 | INFO     | aborting loop
[2025-02-27 07:58:39] 2025-02-27 06:58:30,636 | INFO     | [job] retrieve thread has finished
[2025-02-27 07:58:39] 2025-02-27 06:58:30,942 | INFO     | all payload control threads have been joined
[2025-02-27 07:58:39] 2025-02-27 06:58:31,081 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-27 07:58:39] 2025-02-27 06:58:31,142 | INFO     | [payload] failed_post thread has finished
[2025-02-27 07:58:39] 2025-02-27 06:58:31,300 | INFO     | all job control threads have been joined
[2025-02-27 07:58:39] 2025-02-27 06:58:31,484 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-27 07:58:39] 2025-02-27 06:58:31,501 | INFO     | [data] control thread has finished
[2025-02-27 07:58:39] 2025-02-27 06:58:31,536 | INFO     | [job] job monitor thread has finished
[2025-02-27 07:58:39] 2025-02-27 06:58:31,631 | INFO     | [job] validate thread has finished
[2025-02-27 07:58:39] 2025-02-27 06:58:31,653 | INFO     | [payload] validate_post thread has finished
[2025-02-27 07:58:39] 2025-02-27 06:58:31,714 | INFO     | [payload] execute_payloads thread has finished
[2025-02-27 07:58:39] 2025-02-27 06:58:31,739 | INFO     | [job] create_data_payload thread has finished
[2025-02-27 07:58:39] 2025-02-27 06:58:31,873 | INFO     | [payload] validate_pre thread has finished
[2025-02-27 07:58:39] 2025-02-27 06:58:31,947 | INFO     | [payload] control thread has finished
[2025-02-27 07:58:39] 2025-02-27 06:58:32,126 | INFO     | [data] copytool_in thread has finished
[2025-02-27 07:58:39] 2025-02-27 06:58:32,306 | INFO     | [job] control thread has finished
[2025-02-27 07:58:39] 2025-02-27 06:58:32,441 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-27 07:58:39] 2025-02-27 06:58:33,083 | INFO     | [data] copytool_out thread has finished
[2025-02-27 07:58:39] 2025-02-27 06:58:33,446 | INFO     | [job] queue monitor thread has finished
[2025-02-27 07:58:39] 2025-02-27 06:58:33,634 | INFO     | [data] queue_monitor thread has finished
[2025-02-27 07:58:39] 2025-02-27 06:58:33,947 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22993449273152)>', '<ExcThread(monitor, started 22993210136320)>']
[2025-02-27 07:58:39] 2025-02-27 06:58:34,642 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-27 07:58:39] 2025-02-27 06:58:34,643 | INFO     | [monitor] control thread has ended
[2025-02-27 07:58:39] 2025-02-27 06:58:38,959 | INFO     | all workflow threads have been joined
[2025-02-27 07:58:39] 2025-02-27 06:58:38,959 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-27 07:58:39] 2025-02-27 06:58:38,959 | INFO     | traces error code: 0
[2025-02-27 07:58:39] 2025-02-27 06:58:38,960 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-27 07:58:39] 2025-02-27 06:58:39,097 [wrapper] ==== pilot stdout END ====
[2025-02-27 07:58:39] 2025-02-27 06:58:39,100 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-27 07:58:39] 2025-02-27 06:58:39,104 [wrapper] pilotpid: 2948039
[2025-02-27 07:58:39] 2025-02-27 06:58:39,107 [wrapper] Pilot exit status: 0
[2025-02-27 07:58:39] 2025-02-27 06:58:39,119 [wrapper] pandaids: 6530099870
[2025-02-27 07:58:39] 2025-02-27 06:58:39,239 [wrapper] cleanup supervisor_pilot 3704413 2948040
[2025-02-27 07:58:39] 2025-02-27 06:58:39,243 [wrapper] Test setup, not cleaning
[2025-02-27 07:58:39] 2025-02-27 06:58:39,250 [wrapper] apfmon messages muted
[2025-02-27 07:58:39] 2025-02-27 06:58:39,253 [wrapper] ==== wrapper stdout END ====
[2025-02-27 07:58:39] 2025-02-27 06:58:39,259 [wrapper] ==== wrapper stderr END ====
[2025-02-27 07:58:39]  *** Error codes and diagnostics ***
[2025-02-27 07:58:39]     "exeErrorCode": 0,
[2025-02-27 07:58:39]     "exeErrorDiag": "",
[2025-02-27 07:58:39]     "pilotErrorCode": 0,
[2025-02-27 07:58:39]     "pilotErrorDiag": "",
[2025-02-27 07:58:39]  *** Listing of results directory ***
[2025-02-27 07:58:39] total 432684
[2025-02-27 07:58:39] -rw-r--r-- 1 boinc boinc    491065 Feb 25 11:12 pilot3.tar.gz
[2025-02-27 07:58:39] -rwx------ 1 boinc boinc     35865 Feb 25 11:45 runpilot2-wrapper.sh
[2025-02-27 07:58:39] -rw-r--r-- 1 boinc boinc      5118 Feb 25 11:45 queuedata.json
[2025-02-27 07:58:39] -rw-r--r-- 1 boinc boinc       100 Feb 27 05:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-27 07:58:39] -rwxr-xr-x 1 boinc boinc      7986 Feb 27 05:20 run_atlas
[2025-02-27 07:58:39] -rw-r--r-- 1 boinc boinc       105 Feb 27 05:20 job.xml
[2025-02-27 07:58:39] -rw-r--r-- 1 boinc boinc      6678 Feb 27 05:20 init_data.xml
[2025-02-27 07:58:39] -rw-r--r-- 2 boinc boinc 249765515 Feb 27 05:20 EVNT.43401119._000045.pool.root.1
[2025-02-27 07:58:39] -rw-r--r-- 2 boinc boinc     17569 Feb 27 05:20 start_atlas.sh
[2025-02-27 07:58:39] drwxrwx--x 2 boinc boinc      4096 Feb 27 05:20 shared
[2025-02-27 07:58:39] -rw-r--r-- 2 boinc boinc    503546 Feb 27 05:20 input.tar.gz
[2025-02-27 07:58:39] -rw-r--r-- 1 boinc boinc         0 Feb 27 05:20 boinc_lockfile
[2025-02-27 07:58:39] -rw-r--r-- 1 boinc boinc      2548 Feb 27 05:20 pandaJob.out
[2025-02-27 07:58:39] -rw------- 1 boinc boinc       424 Feb 27 05:20 setup.sh.local
[2025-02-27 07:58:39] -rw------- 1 boinc boinc    989853 Feb 27 05:20 agis_schedconf.cvmfs.json
[2025-02-27 07:58:39] -rw------- 1 boinc boinc   1569202 Feb 27 05:20 agis_ddmendpoints.agis.ALL.json
[2025-02-27 07:58:39] drwx------ 4 boinc boinc      4096 Feb 27 05:20 pilot3
[2025-02-27 07:58:39] -rw------- 1 boinc boinc        95 Feb 27 07:57 pilot_heartbeat.json
[2025-02-27 07:58:39] -rw------- 1 boinc boinc 186983838 Feb 27 07:57 HITS.43401121._001009.pool.root.1
[2025-02-27 07:58:39] -rw-r--r-- 1 boinc boinc       529 Feb 27 07:57 boinc_task_state.xml
[2025-02-27 07:58:39] -rw------- 1 boinc boinc      1021 Feb 27 07:58 memory_monitor_summary.json
[2025-02-27 07:58:39] -rw------- 1 boinc boinc    290050 Feb 27 07:58 log.43401121._001009.job.log.tgz.1
[2025-02-27 07:58:39] -rw------- 1 boinc boinc      7679 Feb 27 07:58 heartbeat.json
[2025-02-27 07:58:39] -rw-r--r-- 1 boinc boinc      8192 Feb 27 07:58 boinc_mmap_file
[2025-02-27 07:58:39] -rw-r--r-- 1 boinc boinc        27 Feb 27 07:58 wrapper_checkpoint.txt
[2025-02-27 07:58:39] -rw------- 1 boinc boinc      4350 Feb 27 07:58 pilotlog.txt
[2025-02-27 07:58:39] -rw------- 1 boinc boinc    973288 Feb 27 07:58 log.43401121._001009.job.log.1
[2025-02-27 07:58:39] -rw------- 1 boinc boinc       357 Feb 27 07:58 output.list
[2025-02-27 07:58:39] -rw-r--r-- 1 boinc boinc       620 Feb 27 07:58 runtime_log
[2025-02-27 07:58:39] -rw------- 1 boinc boinc   1280000 Feb 27 07:58 result.tar.gz
[2025-02-27 07:58:39] -rw-r--r-- 1 boinc boinc     11442 Feb 27 07:58 runtime_log.err
[2025-02-27 07:58:39] -rw------- 1 boinc boinc       662 Feb 27 07:58 ML5MDmCc766n9Rq4apOajLDm4fhM0noT9bVoFjIUDmCNfKDmOGDXAn.diag
[2025-02-27 07:58:39] -rw-r--r-- 1 boinc boinc     21374 Feb 27 07:58 stderr.txt
[2025-02-27 07:58:39] HITS file was successfully produced:
[2025-02-27 07:58:39] -rw------- 1 boinc boinc 186983838 Feb 27 07:57 shared/HITS.pool.root.1
[2025-02-27 07:58:39]  *** Contents of shared directory: ***
[2025-02-27 07:58:39] total 428288
[2025-02-27 07:58:39] -rw-r--r-- 2 boinc boinc 249765515 Feb 27 05:20 ATLAS.root_0
[2025-02-27 07:58:39] -rw-r--r-- 2 boinc boinc     17569 Feb 27 05:20 start_atlas.sh
[2025-02-27 07:58:39] -rw-r--r-- 2 boinc boinc    503546 Feb 27 05:20 input.tar.gz
[2025-02-27 07:58:39] -rw------- 1 boinc boinc 186983838 Feb 27 07:57 HITS.pool.root.1
[2025-02-27 07:58:39] -rw------- 1 boinc boinc   1280000 Feb 27 07:58 result.tar.gz
07:58:40 (2944013): run_atlas exited; CPU time 34181.101861
07:58:40 (2944013): called boinc_finish(0)

</stderr_txt>
]]>

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