Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:09:02 (3611384): wrapper (7.7.26015): starting
07:09:02 (3611384): wrapper: running run_atlas (--nthreads 8)
[2025-02-25 07:09:02] Arguments: --nthreads 8
[2025-02-25 07:09:02] Threads: 8
[2025-02-25 07:09:02] Checking for CVMFS
[2025-02-25 07:09:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 07:09:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 07:09:02] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 07:09:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 07:09:03] 2.11.5.0 1725601 58693 217436 143038 0 239 22179865 37641217 30998 130560 0 2550445 98.805 6613678 33438 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-02-25 07:09:03] CVMFS is ok
[2025-02-25 07:09:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 07:09:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 07:09:03] Further information can be found at the LHC@home message board.
[2025-02-25 07:09:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 07:09:03] Checking for apptainer binary...
[2025-02-25 07:09:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 07:09:03] Running /usr/bin/apptainer --version
[2025-02-25 07:09:03] apptainer version 1.3.6-1.el9
[2025-02-25 07:09:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 07:09:03] c6-2-11-4.aglt2.org
[2025-02-25 07:09:03] apptainer works
[2025-02-25 07:09:03] Set ATHENA_PROC_NUMBER=8
[2025-02-25 07:09:03] Set ATHENA_CORE_NUMBER=8
[2025-02-25 07:09:03] Starting ATLAS job with PandaID=6530163438
[2025-02-25 07:09:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 09:53:52]  *** The last 200 lines of the pilot log: ***
[2025-02-25 09:53:52] 2025-02-25 14:53:21,661 | INFO     | sum of deviations: 89757059451.3974
[2025-02-25 09:53:52] 2025-02-25 14:53:21,661 | INFO     | mean x: 1740490108.5512822
[2025-02-25 09:53:52] 2025-02-25 14:53:21,661 | INFO     | mean y: 2231914.262820513
[2025-02-25 09:53:52] 2025-02-25 14:53:21,661 | INFO     | -- intersect: -132705289444.41289
[2025-02-25 09:53:52] 2025-02-25 14:53:21,661 | INFO     | intersect: -132705289444.41289
[2025-02-25 09:53:52] 2025-02-25 14:53:21,661 | INFO     | chi2: 5.487260916837958
[2025-02-25 09:53:52] 2025-02-25 14:53:21,662 | INFO     | current chi2=5.487260916837958 (change=13.716038244855863 %)
[2025-02-25 09:53:52] 2025-02-25 14:53:21,662 | INFO     | right removable region: 155
[2025-02-25 09:53:52] 2025-02-25 14:53:21,662 | INFO     | model: linear, x: [1740485686.0, 1740485747.0, 1740485808.0, 1740485869.0, 1740485930.0, 1740485991.0, 1740486052.0, 1740486113.0, 1740486174.0, 1740486235.0, 1740
[2025-02-25 09:53:52] 2025-02-25 14:53:21,663 | INFO     | sum of square deviations: 1177189110.480773
[2025-02-25 09:53:52] 2025-02-25 14:53:21,664 | INFO     | sum of deviations: 44875259508.78848
[2025-02-25 09:53:52] 2025-02-25 14:53:21,664 | INFO     | mean x: 1740490413.5576923
[2025-02-25 09:53:52] 2025-02-25 14:53:21,664 | INFO     | mean y: 2271052.967948718
[2025-02-25 09:53:52] 2025-02-25 14:53:21,664 | INFO     | -- intersect: -66346422020.70597
[2025-02-25 09:53:52] 2025-02-25 14:53:21,664 | INFO     | intersect: -66346422020.70597
[2025-02-25 09:53:52] 2025-02-25 14:53:21,664 | INFO     | chi2: 3.7075527814426783
[2025-02-25 09:53:52] 2025-02-25 14:53:21,664 | INFO     | current chi2=3.7075527814426783 (change=41.70090556154517 %)
[2025-02-25 09:53:52] 2025-02-25 14:53:21,665 | INFO     | model: linear, x: [1740485991.0, 1740486052.0, 1740486113.0, 1740486174.0, 1740486235.0, 1740486296.0, 1740486357.0, 1740486418.0, 1740486479.0, 1740486540.0, 1740
[2025-02-25 09:53:52] 2025-02-25 14:53:21,665 | INFO     | sum of square deviations: 1067584310.4635739
[2025-02-25 09:53:52] 2025-02-25 14:53:21,666 | INFO     | sum of deviations: 12632309264.013252
[2025-02-25 09:53:52] 2025-02-25 14:53:21,666 | INFO     | mean x: 1740490566.0596027
[2025-02-25 09:53:52] 2025-02-25 14:53:21,666 | INFO     | mean y: 2315930.8874172186
[2025-02-25 09:53:52] 2025-02-25 14:53:21,666 | INFO     | -- intersect: -20592230922.293007
[2025-02-25 09:53:52] 2025-02-25 14:53:21,666 | INFO     | intersect: -20592230922.293007
[2025-02-25 09:53:52] 2025-02-25 14:53:21,666 | INFO     | chi2: 1.8674778987713876
[2025-02-25 09:53:52] 2025-02-25 14:53:21,666 | INFO     | current chi2=1.8674778987713876 (change=49.630443344768324 %)
[2025-02-25 09:53:52] 2025-02-25 14:53:21,666 | INFO     | model: linear, x: [1740486296.0, 1740486357.0, 1740486418.0, 1740486479.0, 1740486540.0, 1740486601.0, 1740486662.0, 1740486723.0, 1740486784.0, 1740486845.0, 1740
[2025-02-25 09:53:52] 2025-02-25 14:53:21,667 | INFO     | sum of square deviations: 965002897.9452049
[2025-02-25 09:53:52] 2025-02-25 14:53:21,667 | INFO     | sum of deviations: -7803414199.8219185
[2025-02-25 09:53:52] 2025-02-25 14:53:21,667 | INFO     | mean x: 1740490718.5616438
[2025-02-25 09:53:52] 2025-02-25 14:53:21,668 | INFO     | mean y: 2346031.4246575343
[2025-02-25 09:53:52] 2025-02-25 14:53:21,668 | INFO     | -- intersect: 14076676809.9146
[2025-02-25 09:53:52] 2025-02-25 14:53:21,668 | INFO     | intersect: 14076676809.9146
[2025-02-25 09:53:52] 2025-02-25 14:53:21,668 | INFO     | chi2: 0.9270000480848107
[2025-02-25 09:53:52] 2025-02-25 14:53:21,668 | INFO     | current chi2=0.9270000480848107 (change=50.36085574588682 %)
[2025-02-25 09:53:52] 2025-02-25 14:53:21,668 | INFO     | model: linear, x: [1740486601.0, 1740486662.0, 1740486723.0, 1740486784.0, 1740486845.0, 1740486906.0, 1740486967.0, 1740487028.0, 1740487089.0, 1740487150.0, 1740
[2025-02-25 09:53:52] 2025-02-25 14:53:21,668 | INFO     | sum of square deviations: 869212310.4255326
[2025-02-25 09:53:52] 2025-02-25 14:53:21,669 | INFO     | sum of deviations: -8781658345.340425
[2025-02-25 09:53:52] 2025-02-25 14:53:21,669 | INFO     | mean x: 1740490871.06383
[2025-02-25 09:53:52] 2025-02-25 14:53:21,669 | INFO     | mean y: 2347571.8156028367
[2025-02-25 09:53:52] 2025-02-25 14:53:21,669 | INFO     | -- intersect: 17586539603.54587
[2025-02-25 09:53:52] 2025-02-25 14:53:21,670 | INFO     | intersect: 17586539603.54587
[2025-02-25 09:53:52] 2025-02-25 14:53:21,670 | INFO     | chi2: 0.9245344824269424
[2025-02-25 09:53:52] 2025-02-25 14:53:21,670 | INFO     | current chi2=0.9245344824269424 (change=0.26597254908047213 %)
[2025-02-25 09:53:52] 2025-02-25 14:53:21,670 | INFO     | left removable region: 40
[2025-02-25 09:53:52] 2025-02-25 14:53:21,670 | INFO     | model: linear, x: [1740487821.0, 1740487882.0, 1740487943.0, 1740488004.0, 1740488065.0, 1740488126.0, 1740488187.0, 1740488249.0, 1740488309.0, 1740488370.0, 1740
[2025-02-25 09:53:52] 2025-02-25 14:53:21,670 | INFO     | sum of square deviations: 471571121.4434775
[2025-02-25 09:53:52] 2025-02-25 14:53:21,671 | INFO     | sum of deviations: -23341703.426086955
[2025-02-25 09:53:52] 2025-02-25 14:53:21,671 | INFO     | mean x: 1740491298.0695653
[2025-02-25 09:53:52] 2025-02-25 14:53:21,671 | INFO     | mean y: 2363868.6782608693
[2025-02-25 09:53:52] 2025-02-25 14:53:21,671 | INFO     | -- intersect: 88514249.49646866
[2025-02-25 09:53:52] 2025-02-25 14:53:21,671 | INFO     | intersect: 88514249.49646866
[2025-02-25 09:53:52] 2025-02-25 14:53:21,671 | INFO     | chi2: 0.0035121780557508023
[2025-02-25 09:53:52] 2025-02-25 14:53:21,672 | INFO     | -- intersect: 88514249.49646866
[2025-02-25 09:53:52] 2025-02-25 14:53:21,672 | INFO     | current memory leak: -0.05 B/s (using 115 data points, chi2=0.00)
[2025-02-25 09:53:52] 2025-02-25 14:53:21,672 | INFO     | ..............................
[2025-02-25 09:53:52] 2025-02-25 14:53:21,672 | INFO     | . Timing measurements:
[2025-02-25 09:53:52] 2025-02-25 14:53:21,672 | INFO     | . get job = 0 s
[2025-02-25 09:53:52] 2025-02-25 14:53:21,672 | INFO     | . initial setup = 2 s
[2025-02-25 09:53:52] 2025-02-25 14:53:21,673 | INFO     | . payload setup = 5 s
[2025-02-25 09:53:52] 2025-02-25 14:53:21,673 | INFO     | . stage-in = 0 s
[2025-02-25 09:53:52] 2025-02-25 14:53:21,673 | INFO     | . payload execution = 9803 s
[2025-02-25 09:53:52] 2025-02-25 14:53:21,673 | INFO     | . stage-out = 1 s
[2025-02-25 09:53:52] 2025-02-25 14:53:21,673 | INFO     | . log creation = 0 s
[2025-02-25 09:53:52] 2025-02-25 14:53:21,673 | INFO     | ..............................
[2025-02-25 09:53:52] 2025-02-25 14:53:21,780 | INFO     | 
[2025-02-25 09:53:52] 2025-02-25 14:53:21,781 | INFO     | job summary report
[2025-02-25 09:53:52] 2025-02-25 14:53:21,781 | INFO     | --------------------------------------------------
[2025-02-25 09:53:52] 2025-02-25 14:53:21,781 | INFO     | PanDA job id: 6530163438
[2025-02-25 09:53:52] 2025-02-25 14:53:21,781 | INFO     | task id: 43401121
[2025-02-25 09:53:52] 2025-02-25 14:53:21,781 | INFO     | errors: (none)
[2025-02-25 09:53:52] 2025-02-25 14:53:21,781 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 09:53:52] 2025-02-25 14:53:21,781 | INFO     | pilot state: finished 
[2025-02-25 09:53:52] 2025-02-25 14:53:21,781 | INFO     | transexitcode: 0
[2025-02-25 09:53:52] 2025-02-25 14:53:21,781 | INFO     | exeerrorcode: 0
[2025-02-25 09:53:52] 2025-02-25 14:53:21,781 | INFO     | exeerrordiag: 
[2025-02-25 09:53:52] 2025-02-25 14:53:21,781 | INFO     | exitcode: 0
[2025-02-25 09:53:52] 2025-02-25 14:53:21,781 | INFO     | exitmsg: OK
[2025-02-25 09:53:52] 2025-02-25 14:53:21,782 | INFO     | cpuconsumptiontime: 43079 s
[2025-02-25 09:53:52] 2025-02-25 14:53:21,782 | INFO     | nevents: 400
[2025-02-25 09:53:52] 2025-02-25 14:53:21,782 | INFO     | neventsw: 0
[2025-02-25 09:53:52] 2025-02-25 14:53:21,782 | INFO     | pid: 3635397
[2025-02-25 09:53:52] 2025-02-25 14:53:21,782 | INFO     | pgrp: 3635397
[2025-02-25 09:53:52] 2025-02-25 14:53:21,782 | INFO     | corecount: 8
[2025-02-25 09:53:52] 2025-02-25 14:53:21,782 | INFO     | event service: False
[2025-02-25 09:53:52] 2025-02-25 14:53:21,782 | INFO     | sizes: {0: 2383364, 5: 2383570, 11: 2383626, 9812: 2411991, 9813: 2411990, 9816: 2420987, 9819: 2421171, 9832: 2421341}
[2025-02-25 09:53:52] 2025-02-25 14:53:21,782 | INFO     | --------------------------------------------------
[2025-02-25 09:53:52] 2025-02-25 14:53:21,782 | INFO     | 
[2025-02-25 09:53:52] 2025-02-25 14:53:21,782 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-02-25 09:53:52] 2025-02-25 14:53:21,820 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 09:53:52] 2025-02-25 14:53:21,820 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 09:53:52] 2025-02-25 14:53:21,820 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 09:53:52] 2025-02-25 14:53:21,820 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 09:53:52] 2025-02-25 14:53:21,821 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 09:53:52] 2025-02-25 14:53:21,821 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 09:53:52] 2025-02-25 14:53:21,821 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 09:53:52] 2025-02-25 14:53:21,821 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 09:53:52] 2025-02-25 14:53:21,821 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 09:53:52] 2025-02-25 14:53:21,821 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 09:53:52] 2025-02-25 14:53:21,821 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 09:53:52] 2025-02-25 14:53:21,821 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 09:53:52] 2025-02-25 14:53:21,821 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 09:53:52] 2025-02-25 14:53:21,821 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 09:53:52] 2025-02-25 14:53:21,821 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 09:53:52] 2025-02-25 14:53:21,821 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 09:53:52] 2025-02-25 14:53:21,821 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 09:53:52] 2025-02-25 14:53:21,821 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 09:53:52] 2025-02-25 14:53:21,821 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 09:53:52] 2025-02-25 14:53:21,822 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 09:53:52] 2025-02-25 14:53:21,822 | INFO     | job 6530163438 has completed (purged errors)
[2025-02-25 09:53:52] 2025-02-25 14:53:21,822 | INFO     | overall cleanup function is called
[2025-02-25 09:53:52] 2025-02-25 14:53:22,830 | INFO     | --- collectZombieJob: --- 10, [3635397]
[2025-02-25 09:53:52] 2025-02-25 14:53:22,834 | INFO     | zombie collector waiting for pid 3635397
[2025-02-25 09:53:52] 2025-02-25 14:53:22,834 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 09:53:52] 2025-02-25 14:53:22,834 | INFO     | collected zombie processes
[2025-02-25 09:53:52] 2025-02-25 14:53:22,834 | INFO     | will attempt to kill all subprocesses of pid=3635397
[2025-02-25 09:53:52] 2025-02-25 14:53:23,341 | INFO     | process IDs to be killed: [3635397] (in reverse order)
[2025-02-25 09:53:52] 2025-02-25 14:53:23,675 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 09:53:52] 2025-02-25 14:53:23,676 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 09:53:52] 2025-02-25 14:53:23,700 | INFO     | did not find any defunct processes belonging to 3635397
[2025-02-25 09:53:52] 2025-02-25 14:53:23,744 | INFO     | did not find any defunct processes belonging to 3635397
[2025-02-25 09:53:52] 2025-02-25 14:53:23,744 | INFO     | ready for new job
[2025-02-25 09:53:52] 2025-02-25 14:53:23,744 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 09:53:52] 2025-02-25 14:53:23,746 | INFO     | **************************************
[2025-02-25 09:53:52] 2025-02-25 14:53:23,746 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 09:53:52] 2025-02-25 14:53:23,746 | INFO     | **************************************
[2025-02-25 09:53:52] 2025-02-25 14:53:23,746 | INFO     | 
[2025-02-25 09:53:52] 2025-02-25 14:53:23,760 | INFO     | architecture information:
[2025-02-25 09:53:52] 2025-02-25 14:53:23,764 | INFO     | executing command: cat /etc/os-release
[2025-02-25 09:53:52] 2025-02-25 14:53:23,829 | INFO     | cat /etc/os-release:
[2025-02-25 09:53:52] NAME="CentOS Linux"
[2025-02-25 09:53:52] VERSION="7 (Core)"
[2025-02-25 09:53:52] ID="centos"
[2025-02-25 09:53:52] ID_LIKE="rhel fedora"
[2025-02-25 09:53:52] VERSION_ID="7"
[2025-02-25 09:53:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 09:53:52] ANSI_COLOR="0;31"
[2025-02-25 09:53:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 09:53:52] HOME_URL="https://www.centos.org/"
[2025-02-25 09:53:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 09:53:52] 
[2025-02-25 09:53:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 09:53:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 09:53:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 09:53:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 09:53:52] 
[2025-02-25 09:53:52] 2025-02-25 14:53:23,830 | INFO     | **************************************
[2025-02-25 09:53:52] 2025-02-25 14:53:24,334 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-02-25 09:53:52] 2025-02-25 14:53:24,428 | INFO     | sufficient remaining disk space (92959408128 B)
[2025-02-25 09:53:52] 2025-02-25 14:53:24,428 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 09:53:52] 2025-02-25 14:53:24,428 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 09:53:52] 2025-02-25 14:53:24,429 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 09:53:52] 2025-02-25 14:53:24,429 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 09:53:52] 2025-02-25 14:53:24,519 | INFO     | all data control threads have been joined
[2025-02-25 09:53:52] 2025-02-25 14:53:24,592 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-02-25 09:53:52] 2025-02-25 14:53:24,592 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-02-25 09:53:52] 2025-02-25 14:53:24,592 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 09:53:52] 2025-02-25 14:53:24,592 | INFO     | will abort loop
[2025-02-25 09:53:52] 2025-02-25 14:53:24,661 | INFO     | all job control threads have been joined
[2025-02-25 09:53:52] 2025-02-25 14:53:24,714 | INFO     | all payload control threads have been joined
[2025-02-25 09:53:52] 2025-02-25 14:53:25,434 | INFO     | [job] retrieve thread has finished
[2025-02-25 09:53:52] 2025-02-25 14:53:25,490 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 09:53:52] 2025-02-25 14:53:25,531 | INFO     | [data] control thread has finished
[2025-02-25 09:53:52] 2025-02-25 14:53:25,622 | INFO     | [job] job monitor thread has finished
[2025-02-25 09:53:52] 2025-02-25 14:53:25,679 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 09:53:52] 2025-02-25 14:53:25,693 | INFO     | [job] control thread has finished
[2025-02-25 09:53:52] 2025-02-25 14:53:25,720 | INFO     | [payload] control thread has finished
[2025-02-25 09:53:52] 2025-02-25 14:53:25,891 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 09:53:52] 2025-02-25 14:53:26,136 | INFO     | [payload] validate_post thread has finished
[2025-02-25 09:53:52] 2025-02-25 14:53:26,203 | INFO     | PID=3616772 has CPU usage=8.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-02-25 09:53:52] 2025-02-25 14:53:26,203 | INFO     | .. there are 39 such processes running
[2025-02-25 09:53:52] 2025-02-25 14:53:26,204 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 09:53:52] 2025-02-25 14:53:26,204 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 09:53:52] 2025-02-25 14:53:26,204 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 09:53:52] 2025-02-25 14:53:26,286 | INFO     | [job] validate thread has finished
[2025-02-25 09:53:52] 2025-02-25 14:53:26,436 | INFO     | [data] copytool_out thread has finished
[2025-02-25 09:53:52] 2025-02-25 14:53:26,580 | INFO     | [data] copytool_in thread has finished
[2025-02-25 09:53:52] 2025-02-25 14:53:26,658 | INFO     | [payload] failed_post thread has finished
[2025-02-25 09:53:52] 2025-02-25 14:53:26,804 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 09:53:52] 2025-02-25 14:53:27,812 | INFO     | [job] queue monitor thread has finished
[2025-02-25 09:53:52] 2025-02-25 14:53:28,456 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 09:53:52] 2025-02-25 14:53:34,520 | INFO     | job.realtimelogging is not enabled
[2025-02-25 09:53:52] 2025-02-25 14:53:35,526 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 09:53:52] 2025-02-25 14:53:35,634 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139957444568896)>', '<ExcThread(monitor, started 139956743829248)>']
[2025-02-25 09:53:52] 2025-02-25 14:53:36,268 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 09:53:52] 2025-02-25 14:53:36,268 | INFO     | [monitor] control thread has ended
[2025-02-25 09:53:52] 2025-02-25 14:53:40,662 | INFO     | all workflow threads have been joined
[2025-02-25 09:53:52] 2025-02-25 14:53:40,662 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 09:53:52] 2025-02-25 14:53:40,662 | INFO     | traces error code: 0
[2025-02-25 09:53:52] 2025-02-25 14:53:40,663 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 09:53:52] 2025-02-25 14:53:40,854 [wrapper] ==== pilot stdout END ====
[2025-02-25 09:53:52] 2025-02-25 14:53:40,859 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 09:53:52] 2025-02-25 14:53:40,866 [wrapper] pilotpid: 3616772
[2025-02-25 09:53:52] 2025-02-25 14:53:40,876 [wrapper] Pilot exit status: 0
[2025-02-25 09:53:52] 2025-02-25 14:53:40,929 [wrapper] pandaids: 6530163438
[2025-02-25 09:53:52] 2025-02-25 14:53:41,021 [wrapper] cleanup supervisor_pilot  298620 3616773
[2025-02-25 09:53:52] 2025-02-25 14:53:41,026 [wrapper] Test setup, not cleaning
[2025-02-25 09:53:52] 2025-02-25 14:53:41,038 [wrapper] apfmon messages muted
[2025-02-25 09:53:52] 2025-02-25 14:53:41,040 [wrapper] ==== wrapper stdout END ====
[2025-02-25 09:53:52] 2025-02-25 14:53:41,042 [wrapper] ==== wrapper stderr END ====
[2025-02-25 09:53:52]  *** Error codes and diagnostics ***
[2025-02-25 09:53:52]     "exeErrorCode": 0,
[2025-02-25 09:53:52]     "exeErrorDiag": "",
[2025-02-25 09:53:52]     "pilotErrorCode": 0,
[2025-02-25 09:53:52]     "pilotErrorDiag": "",
[2025-02-25 09:53:52]  *** Listing of results directory ***
[2025-02-25 09:53:52] total 432600
[2025-02-25 09:53:52] -rw-r--r--. 1 boincer umatlas    491065 Feb 25 06:17 pilot3.tar.gz
[2025-02-25 09:53:52] -rwx------. 1 boincer umatlas     35865 Feb 25 06:45 runpilot2-wrapper.sh
[2025-02-25 09:53:52] -rw-r--r--. 1 boincer umatlas      5118 Feb 25 06:45 queuedata.json
[2025-02-25 09:53:52] -rw-r--r--. 1 boincer umatlas       100 Feb 25 07:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 09:53:52] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 25 07:09 run_atlas
[2025-02-25 09:53:52] -rw-r--r--. 1 boincer umatlas       105 Feb 25 07:09 job.xml
[2025-02-25 09:53:52] -rw-r--r--. 2 boincer umatlas 249949610 Feb 25 07:09 EVNT.43401119._000056.pool.root.1
[2025-02-25 09:53:52] -rw-r--r--. 2 boincer umatlas     17569 Feb 25 07:09 start_atlas.sh
[2025-02-25 09:53:52] drwxrwx--x. 2 boincer umatlas      4096 Feb 25 07:09 shared
[2025-02-25 09:53:52] -rw-r--r--. 2 boincer umatlas    503551 Feb 25 07:09 input.tar.gz
[2025-02-25 09:53:52] -rw-r--r--. 1 boincer umatlas         0 Feb 25 07:09 boinc_lockfile
[2025-02-25 09:53:52] -rw-r--r--. 1 boincer umatlas      2549 Feb 25 07:09 pandaJob.out
[2025-02-25 09:53:52] -rw-------. 1 boincer umatlas       467 Feb 25 07:09 setup.sh.local
[2025-02-25 09:53:52] -rw-------. 1 boincer umatlas    989526 Feb 25 07:09 agis_schedconf.cvmfs.json
[2025-02-25 09:53:52] -rw-------. 1 boincer umatlas   1582519 Feb 25 07:09 agis_ddmendpoints.agis.ALL.json
[2025-02-25 09:53:52] drwx------. 4 boincer umatlas      4096 Feb 25 07:09 pilot3
[2025-02-25 09:53:52] -rw-r--r--. 1 boincer umatlas      6856 Feb 25 09:48 init_data.xml
[2025-02-25 09:53:52] -rw-------. 1 boincer umatlas 186518658 Feb 25 09:52 HITS.43401121._001343.pool.root.1
[2025-02-25 09:53:52] -rw-r--r--. 1 boincer umatlas       529 Feb 25 09:52 boinc_task_state.xml
[2025-02-25 09:53:52] -rw-------. 1 boincer umatlas      1051 Feb 25 09:52 memory_monitor_summary.json
[2025-02-25 09:53:52] -rw-------. 1 boincer umatlas        95 Feb 25 09:53 pilot_heartbeat.json
[2025-02-25 09:53:52] -rw-------. 1 boincer umatlas    370882 Feb 25 09:53 log.43401121._001343.job.log.tgz.1
[2025-02-25 09:53:52] -rw-------. 1 boincer umatlas      7749 Feb 25 09:53 heartbeat.json
[2025-02-25 09:53:52] -rw-------. 1 boincer umatlas      4868 Feb 25 09:53 pilotlog.txt
[2025-02-25 09:53:52] -rw-------. 1 boincer umatlas    983747 Feb 25 09:53 log.43401121._001343.job.log.1
[2025-02-25 09:53:52] -rw-------. 1 boincer umatlas       357 Feb 25 09:53 output.list
[2025-02-25 09:53:52] -rw-r--r--. 1 boincer umatlas       620 Feb 25 09:53 runtime_log
[2025-02-25 09:53:52] -rw-------. 1 boincer umatlas   1372160 Feb 25 09:53 result.tar.gz
[2025-02-25 09:53:52] -rw-r--r--. 1 boincer umatlas     11423 Feb 25 09:53 runtime_log.err
[2025-02-25 09:53:52] -rw-------. 1 boincer umatlas       658 Feb 25 09:53 7BkLDmMY866nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmxJwKDmd25OIo.diag
[2025-02-25 09:53:52] -rw-r--r--. 1 boincer umatlas        27 Feb 25 09:53 wrapper_checkpoint.txt
[2025-02-25 09:53:52] -rw-r--r--. 1 boincer umatlas      8192 Feb 25 09:53 boinc_mmap_file
[2025-02-25 09:53:52] -rw-r--r--. 1 boincer umatlas     21642 Feb 25 09:53 stderr.txt
[2025-02-25 09:53:52] HITS file was successfully produced:
[2025-02-25 09:53:52] -rw-------. 1 boincer umatlas 186518658 Feb 25 09:52 shared/HITS.pool.root.1
[2025-02-25 09:53:52]  *** Contents of shared directory: ***
[2025-02-25 09:53:52] total 428100
[2025-02-25 09:53:52] -rw-r--r--. 2 boincer umatlas 249949610 Feb 25 07:09 ATLAS.root_0
[2025-02-25 09:53:52] -rw-r--r--. 2 boincer umatlas     17569 Feb 25 07:09 start_atlas.sh
[2025-02-25 09:53:52] -rw-r--r--. 2 boincer umatlas    503551 Feb 25 07:09 input.tar.gz
[2025-02-25 09:53:52] -rw-------. 1 boincer umatlas 186518658 Feb 25 09:52 HITS.pool.root.1
[2025-02-25 09:53:52] -rw-------. 1 boincer umatlas   1372160 Feb 25 09:53 result.tar.gz
09:53:54 (3611384): run_atlas exited; CPU time 43011.080585
09:53:54 (3611384): called boinc_finish(0)

</stderr_txt>
]]>

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