Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:07:01 (3583967): wrapper (7.7.26015): starting
07:07:01 (3583967): wrapper: running run_atlas (--nthreads 8)
[2025-02-25 07:07:01] Arguments: --nthreads 8
[2025-02-25 07:07:01] Threads: 8
[2025-02-25 07:07:01] Checking for CVMFS
[2025-02-25 07:07:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 07:07:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 07:07:01] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 07:07:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 07:07:02] 2.11.5.0 1725601 58691 217480 143038 2 114 22178861 37641217 32174 130560 0 2492246 98.778 6613678 33438 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-02-25 07:07:02] CVMFS is ok
[2025-02-25 07:07:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 07:07:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 07:07:02] Further information can be found at the LHC@home message board.
[2025-02-25 07:07:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 07:07:02] Checking for apptainer binary...
[2025-02-25 07:07:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 07:07:02] Running /usr/bin/apptainer --version
[2025-02-25 07:07:02] apptainer version 1.3.6-1.el9
[2025-02-25 07:07:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 07:07:02] c6-2-11-4.aglt2.org
[2025-02-25 07:07:02] apptainer works
[2025-02-25 07:07:02] Set ATHENA_PROC_NUMBER=8
[2025-02-25 07:07:02] Set ATHENA_CORE_NUMBER=8
[2025-02-25 07:07:02] Starting ATLAS job with PandaID=6530021179
[2025-02-25 07:07:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 09:48:57]  *** The last 200 lines of the pilot log: ***
[2025-02-25 09:48:57] 2025-02-25 14:48:44,085 | INFO     | model: linear, x: [1740485595.0, 1740485656.0, 1740485717.0, 1740485778.0, 1740485839.0, 1740485900.0, 1740485961.0, 1740486022.0, 1740486083.0, 1740486144.0, 1740
[2025-02-25 09:48:57] 2025-02-25 14:48:44,085 | INFO     | sum of square deviations: 1110554167.9738517
[2025-02-25 09:48:57] 2025-02-25 14:48:44,086 | INFO     | sum of deviations: 42279486453.93461
[2025-02-25 09:48:57] 2025-02-25 14:48:44,086 | INFO     | mean x: 1740490231.013072
[2025-02-25 09:48:57] 2025-02-25 14:48:44,086 | INFO     | mean y: 2215665.0326797385
[2025-02-25 09:48:57] 2025-02-25 14:48:44,086 | INFO     | -- intersect: -66259327686.40817
[2025-02-25 09:48:57] 2025-02-25 14:48:44,086 | INFO     | intersect: -66259327686.40817
[2025-02-25 09:48:57] 2025-02-25 14:48:44,086 | INFO     | chi2: 3.4180582597447904
[2025-02-25 09:48:57] 2025-02-25 14:48:44,087 | INFO     | current chi2=3.4180582597447904 (change=42.6495987323928 %)
[2025-02-25 09:48:57] 2025-02-25 14:48:44,089 | INFO     | model: linear, x: [1740485900.0, 1740485961.0, 1740486022.0, 1740486083.0, 1740486144.0, 1740486205.0, 1740486266.0, 1740486327.0, 1740486388.0, 1740486449.0, 1740
[2025-02-25 09:48:57] 2025-02-25 14:48:44,089 | INFO     | sum of square deviations: 1005193442.9729747
[2025-02-25 09:48:57] 2025-02-25 14:48:44,090 | INFO     | sum of deviations: 13017337239.648651
[2025-02-25 09:48:57] 2025-02-25 14:48:44,090 | INFO     | mean x: 1740490383.5135136
[2025-02-25 09:48:57] 2025-02-25 14:48:44,090 | INFO     | mean y: 2258080.4256756757
[2025-02-25 09:48:57] 2025-02-25 14:48:44,090 | INFO     | -- intersect: -22537234634.082573
[2025-02-25 09:48:57] 2025-02-25 14:48:44,090 | INFO     | intersect: -22537234634.082573
[2025-02-25 09:48:57] 2025-02-25 14:48:44,090 | INFO     | chi2: 1.7511610658094483
[2025-02-25 09:48:57] 2025-02-25 14:48:44,091 | INFO     | current chi2=1.7511610658094483 (change=48.76737221149065 %)
[2025-02-25 09:48:57] 2025-02-25 14:48:44,091 | INFO     | model: linear, x: [1740486205.0, 1740486266.0, 1740486327.0, 1740486388.0, 1740486449.0, 1740486510.0, 1740486571.0, 1740486632.0, 1740486693.0, 1740486754.0, 1740
[2025-02-25 09:48:57] 2025-02-25 14:48:44,091 | INFO     | sum of square deviations: 906716567.9720294
[2025-02-25 09:48:57] 2025-02-25 14:48:44,096 | INFO     | sum of deviations: -7838012011.076923
[2025-02-25 09:48:57] 2025-02-25 14:48:44,097 | INFO     | mean x: 1740490536.013986
[2025-02-25 09:48:57] 2025-02-25 14:48:44,107 | INFO     | mean y: 2290130.5384615385
[2025-02-25 09:48:57] 2025-02-25 14:48:44,108 | INFO     | -- intersect: 15047769840.868587
[2025-02-25 09:48:57] 2025-02-25 14:48:44,109 | INFO     | intersect: 15047769840.868587
[2025-02-25 09:48:57] 2025-02-25 14:48:44,109 | INFO     | chi2: 0.7525378885221852
[2025-02-25 09:48:57] 2025-02-25 14:48:44,110 | INFO     | current chi2=0.7525378885221852 (change=57.02634650717662 %)
[2025-02-25 09:48:57] 2025-02-25 14:48:44,114 | INFO     | model: linear, x: [1740486510.0, 1740486571.0, 1740486632.0, 1740486693.0, 1740486754.0, 1740486815.0, 1740486876.0, 1740486937.0, 1740486998.0, 1740487059.0, 1740
[2025-02-25 09:48:57] 2025-02-25 14:48:44,114 | INFO     | sum of square deviations: 814890980.4710153
[2025-02-25 09:48:57] 2025-02-25 14:48:44,115 | INFO     | sum of deviations: -8219219045.079711
[2025-02-25 09:48:57] 2025-02-25 14:48:44,115 | INFO     | mean x: 1740490688.5144928
[2025-02-25 09:48:57] 2025-02-25 14:48:44,115 | INFO     | mean y: 2290744.7898550723
[2025-02-25 09:48:57] 2025-02-25 14:48:44,115 | INFO     | -- intersect: 17557368120.35917
[2025-02-25 09:48:57] 2025-02-25 14:48:44,115 | INFO     | intersect: 17557368120.35917
[2025-02-25 09:48:57] 2025-02-25 14:48:44,116 | INFO     | chi2: 0.751288536935766
[2025-02-25 09:48:57] 2025-02-25 14:48:44,116 | INFO     | current chi2=0.751288536935766 (change=0.16601842983249523 %)
[2025-02-25 09:48:57] 2025-02-25 14:48:44,116 | INFO     | left removable region: 40
[2025-02-25 09:48:57] 2025-02-25 14:48:44,116 | INFO     | model: linear, x: [1740487730.0, 1740487791.0, 1740487852.0, 1740487913.0, 1740487974.0, 1740488035.0, 1740488096.0, 1740488157.0, 1740488218.0, 1740488279.0, 1740
[2025-02-25 09:48:57] 2025-02-25 14:48:44,116 | INFO     | sum of square deviations: 435620765.9642866
[2025-02-25 09:48:57] 2025-02-25 14:48:44,117 | INFO     | sum of deviations: -80818121.64285722
[2025-02-25 09:48:57] 2025-02-25 14:48:44,117 | INFO     | mean x: 1740491115.517857
[2025-02-25 09:48:57] 2025-02-25 14:48:44,117 | INFO     | mean y: 2305077.3214285714
[2025-02-25 09:48:57] 2025-02-25 14:48:44,117 | INFO     | -- intersect: 325208009.60213256
[2025-02-25 09:48:57] 2025-02-25 14:48:44,117 | INFO     | intersect: 325208009.60213256
[2025-02-25 09:48:57] 2025-02-25 14:48:44,117 | INFO     | chi2: 0.007606716871072889
[2025-02-25 09:48:57] 2025-02-25 14:48:44,118 | INFO     | -- intersect: 325208009.60213256
[2025-02-25 09:48:57] 2025-02-25 14:48:44,122 | INFO     | current memory leak: -0.19 B/s (using 112 data points, chi2=0.01)
[2025-02-25 09:48:57] 2025-02-25 14:48:44,123 | INFO     | ..............................
[2025-02-25 09:48:57] 2025-02-25 14:48:44,123 | INFO     | . Timing measurements:
[2025-02-25 09:48:57] 2025-02-25 14:48:44,123 | INFO     | . get job = 0 s
[2025-02-25 09:48:57] 2025-02-25 14:48:44,124 | INFO     | . initial setup = 3 s
[2025-02-25 09:48:57] 2025-02-25 14:48:44,124 | INFO     | . payload setup = 10 s
[2025-02-25 09:48:57] 2025-02-25 14:48:44,124 | INFO     | . stage-in = 0 s
[2025-02-25 09:48:57] 2025-02-25 14:48:44,124 | INFO     | . payload execution = 9625 s
[2025-02-25 09:48:57] 2025-02-25 14:48:44,124 | INFO     | . stage-out = 2 s
[2025-02-25 09:48:57] 2025-02-25 14:48:44,124 | INFO     | . log creation = 0 s
[2025-02-25 09:48:57] 2025-02-25 14:48:44,124 | INFO     | ..............................
[2025-02-25 09:48:57] 2025-02-25 14:48:44,350 | INFO     | 
[2025-02-25 09:48:57] 2025-02-25 14:48:44,350 | INFO     | job summary report
[2025-02-25 09:48:57] 2025-02-25 14:48:44,350 | INFO     | --------------------------------------------------
[2025-02-25 09:48:57] 2025-02-25 14:48:44,350 | INFO     | PanDA job id: 6530021179
[2025-02-25 09:48:57] 2025-02-25 14:48:44,350 | INFO     | task id: 43401121
[2025-02-25 09:48:57] 2025-02-25 14:48:44,350 | INFO     | errors: (none)
[2025-02-25 09:48:57] 2025-02-25 14:48:44,350 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 09:48:57] 2025-02-25 14:48:44,351 | INFO     | pilot state: finished 
[2025-02-25 09:48:57] 2025-02-25 14:48:44,351 | INFO     | transexitcode: 0
[2025-02-25 09:48:57] 2025-02-25 14:48:44,351 | INFO     | exeerrorcode: 0
[2025-02-25 09:48:57] 2025-02-25 14:48:44,351 | INFO     | exeerrordiag: 
[2025-02-25 09:48:57] 2025-02-25 14:48:44,351 | INFO     | exitcode: 0
[2025-02-25 09:48:57] 2025-02-25 14:48:44,351 | INFO     | exitmsg: OK
[2025-02-25 09:48:57] 2025-02-25 14:48:44,351 | INFO     | cpuconsumptiontime: 42602 s
[2025-02-25 09:48:57] 2025-02-25 14:48:44,351 | INFO     | nevents: 400
[2025-02-25 09:48:57] 2025-02-25 14:48:44,351 | INFO     | neventsw: 0
[2025-02-25 09:48:57] 2025-02-25 14:48:44,351 | INFO     | pid: 3598160
[2025-02-25 09:48:57] 2025-02-25 14:48:44,351 | INFO     | pgrp: 3598160
[2025-02-25 09:48:57] 2025-02-25 14:48:44,351 | INFO     | corecount: 8
[2025-02-25 09:48:57] 2025-02-25 14:48:44,351 | INFO     | event service: False
[2025-02-25 09:48:57] 2025-02-25 14:48:44,351 | INFO     | sizes: {0: 2383350, 1: 2383378, 8: 2383584, 12: 2383612, 9640: 2411773, 9643: 2420898, 9654: 2421012}
[2025-02-25 09:48:57] 2025-02-25 14:48:44,352 | INFO     | --------------------------------------------------
[2025-02-25 09:48:57] 2025-02-25 14:48:44,352 | INFO     | 
[2025-02-25 09:48:57] 2025-02-25 14:48:44,352 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-25 09:48:57] 2025-02-25 14:48:44,405 | WARNING  | process 3598160 can no longer be monitored (due to stat problems) - aborting
[2025-02-25 09:48:57] 2025-02-25 14:48:44,405 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6530021179/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 09:48:57] 2025-02-25 14:48:44,406 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6530021179/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 09:48:57] 2025-02-25 14:48:44,408 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3337569 B
[2025-02-25 09:48:57] 2025-02-25 14:48:44,408 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16010 B
[2025-02-25 09:48:57] 2025-02-25 14:48:44,408 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-25 09:48:57] 2025-02-25 14:48:44,415 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 09:48:57] 2025-02-25 14:48:44,416 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 09:48:57] 2025-02-25 14:48:44,416 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 09:48:57] 2025-02-25 14:48:44,416 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 09:48:57] 2025-02-25 14:48:44,416 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 09:48:57] 2025-02-25 14:48:44,416 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 09:48:57] 2025-02-25 14:48:44,416 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 09:48:57] 2025-02-25 14:48:44,416 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 09:48:57] 2025-02-25 14:48:44,416 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 09:48:57] 2025-02-25 14:48:44,417 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 09:48:57] 2025-02-25 14:48:44,417 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 09:48:57] 2025-02-25 14:48:44,417 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 09:48:57] 2025-02-25 14:48:44,417 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 09:48:57] 2025-02-25 14:48:44,417 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 09:48:57] 2025-02-25 14:48:44,417 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 09:48:57] 2025-02-25 14:48:44,417 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 09:48:57] 2025-02-25 14:48:44,417 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 09:48:57] 2025-02-25 14:48:44,417 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 09:48:57] 2025-02-25 14:48:44,417 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 09:48:57] 2025-02-25 14:48:44,418 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 09:48:57] 2025-02-25 14:48:44,418 | INFO     | job 6530021179 has completed (purged errors)
[2025-02-25 09:48:57] 2025-02-25 14:48:44,418 | INFO     | overall cleanup function is called
[2025-02-25 09:48:57] 2025-02-25 14:48:44,439 | INFO     | sufficient remaining disk space (93054828544 B)
[2025-02-25 09:48:57] 2025-02-25 14:48:44,439 | WARNING  | skipping size check of workdir since it has not been created yet
[2025-02-25 09:48:57] 2025-02-25 14:48:44,439 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6530021179/HITS.43401121._000214.pool.root.1 since it does not exist
[2025-02-25 09:48:57] 2025-02-25 14:48:44,774 | INFO     | number of running child processes to parent process 3598160: 1
[2025-02-25 09:48:57] 2025-02-25 14:48:44,780 | INFO     | maximum number of monitored processes: 6
[2025-02-25 09:48:57] 2025-02-25 14:48:44,780 | INFO     | aborting job monitoring since job object (job id=6530021179) has expired
[2025-02-25 09:48:57] 2025-02-25 14:48:45,428 | INFO     | --- collectZombieJob: --- 10, [3598160]
[2025-02-25 09:48:57] 2025-02-25 14:48:45,428 | INFO     | zombie collector waiting for pid 3598160
[2025-02-25 09:48:57] 2025-02-25 14:48:45,428 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 09:48:57] 2025-02-25 14:48:45,428 | INFO     | collected zombie processes
[2025-02-25 09:48:57] 2025-02-25 14:48:45,428 | INFO     | will attempt to kill all subprocesses of pid=3598160
[2025-02-25 09:48:57] 2025-02-25 14:48:45,712 | INFO     | process IDs to be killed: [3598160] (in reverse order)
[2025-02-25 09:48:57] 2025-02-25 14:48:45,945 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 09:48:57] 2025-02-25 14:48:45,945 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 09:48:57] 2025-02-25 14:48:45,963 | INFO     | did not find any defunct processes belonging to 3598160
[2025-02-25 09:48:57] 2025-02-25 14:48:45,981 | INFO     | did not find any defunct processes belonging to 3598160
[2025-02-25 09:48:57] 2025-02-25 14:48:45,981 | INFO     | ready for new job
[2025-02-25 09:48:57] 2025-02-25 14:48:45,981 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 09:48:57] 2025-02-25 14:48:45,991 | INFO     | **************************************
[2025-02-25 09:48:57] 2025-02-25 14:48:45,991 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 09:48:57] 2025-02-25 14:48:45,992 | INFO     | **************************************
[2025-02-25 09:48:57] 2025-02-25 14:48:45,992 | INFO     | 
[2025-02-25 09:48:57] 2025-02-25 14:48:46,015 | INFO     | architecture information:
[2025-02-25 09:48:57] 2025-02-25 14:48:46,019 | INFO     | executing command: cat /etc/os-release
[2025-02-25 09:48:57] 2025-02-25 14:48:46,081 | INFO     | cat /etc/os-release:
[2025-02-25 09:48:57] NAME="CentOS Linux"
[2025-02-25 09:48:57] VERSION="7 (Core)"
[2025-02-25 09:48:57] ID="centos"
[2025-02-25 09:48:57] ID_LIKE="rhel fedora"
[2025-02-25 09:48:57] VERSION_ID="7"
[2025-02-25 09:48:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 09:48:57] ANSI_COLOR="0;31"
[2025-02-25 09:48:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 09:48:57] HOME_URL="https://www.centos.org/"
[2025-02-25 09:48:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 09:48:57] 
[2025-02-25 09:48:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 09:48:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 09:48:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 09:48:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 09:48:57] 
[2025-02-25 09:48:57] 2025-02-25 14:48:46,081 | INFO     | **************************************
[2025-02-25 09:48:57] 2025-02-25 14:48:46,585 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-25 09:48:57] 2025-02-25 14:48:46,626 | INFO     | sufficient remaining disk space (93055877120 B)
[2025-02-25 09:48:57] 2025-02-25 14:48:46,627 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 09:48:57] 2025-02-25 14:48:46,627 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 09:48:57] 2025-02-25 14:48:46,627 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 09:48:57] 2025-02-25 14:48:46,627 | INFO     | aborting loop
[2025-02-25 09:48:57] 2025-02-25 14:48:46,627 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-25 09:48:57] 2025-02-25 14:48:46,628 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 09:48:57] 2025-02-25 14:48:46,628 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 09:48:57] 2025-02-25 14:48:46,628 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 09:48:57] 2025-02-25 14:48:46,753 | INFO     | all job control threads have been joined
[2025-02-25 09:48:57] 2025-02-25 14:48:46,800 | INFO     | all data control threads have been joined
[2025-02-25 09:48:57] 2025-02-25 14:48:47,617 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 09:48:57] 2025-02-25 14:48:47,633 | INFO     | [job] retrieve thread has finished
[2025-02-25 09:48:57] 2025-02-25 14:48:47,633 | INFO     | [job] job monitor thread has finished
[2025-02-25 09:48:57] 2025-02-25 14:48:47,741 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 09:48:57] 2025-02-25 14:48:47,759 | INFO     | [job] control thread has finished
[2025-02-25 09:48:57] 2025-02-25 14:48:47,806 | INFO     | [data] control thread has finished
[2025-02-25 09:48:57] 2025-02-25 14:48:47,963 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 09:48:57] 2025-02-25 14:48:48,118 | INFO     | all payload control threads have been joined
[2025-02-25 09:48:57] 2025-02-25 14:48:48,128 | INFO     | [job] validate thread has finished
[2025-02-25 09:48:57] 2025-02-25 14:48:48,137 | INFO     | [payload] failed_post thread has finished
[2025-02-25 09:48:57] 2025-02-25 14:48:48,162 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 09:48:57] 2025-02-25 14:48:48,162 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 09:48:57] 2025-02-25 14:48:48,163 | INFO     | [data] copytool_in thread has finished
[2025-02-25 09:48:57] 2025-02-25 14:48:48,694 | INFO     | [payload] validate_post thread has finished
[2025-02-25 09:48:57] 2025-02-25 14:48:48,768 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 09:48:57] 2025-02-25 14:48:49,124 | INFO     | [payload] control thread has finished
[2025-02-25 09:48:57] 2025-02-25 14:48:49,364 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 09:48:57] 2025-02-25 14:48:49,971 | INFO     | [data] copytool_out thread has finished
[2025-02-25 09:48:57] 2025-02-25 14:48:50,369 | INFO     | [job] queue monitor thread has finished
[2025-02-25 09:48:57] 2025-02-25 14:48:51,626 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 09:48:57] 2025-02-25 14:48:51,859 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140250946152256)>', '<ExcThread(monitor, started 140250454148864)>']
[2025-02-25 09:48:57] 2025-02-25 14:48:52,663 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 09:48:57] 2025-02-25 14:48:52,663 | INFO     | [monitor] control thread has ended
[2025-02-25 09:48:57] 2025-02-25 14:48:56,885 | INFO     | all workflow threads have been joined
[2025-02-25 09:48:57] 2025-02-25 14:48:56,885 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 09:48:57] 2025-02-25 14:48:56,885 | INFO     | traces error code: 0
[2025-02-25 09:48:57] 2025-02-25 14:48:56,886 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 09:48:57] 2025-02-25 14:48:57,219 [wrapper] ==== pilot stdout END ====
[2025-02-25 09:48:57] 2025-02-25 14:48:57,221 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 09:48:57] 2025-02-25 14:48:57,223 [wrapper] pilotpid: 3589648
[2025-02-25 09:48:57] 2025-02-25 14:48:57,226 [wrapper] Pilot exit status: 0
[2025-02-25 09:48:57] 2025-02-25 14:48:57,255 [wrapper] pandaids: 6530021179
[2025-02-25 09:48:57] 2025-02-25 14:48:57,365 [wrapper] cleanup supervisor_pilot  290636 3589649
[2025-02-25 09:48:57] 2025-02-25 14:48:57,384 [wrapper] Test setup, not cleaning
[2025-02-25 09:48:57] 2025-02-25 14:48:57,389 [wrapper] apfmon messages muted
[2025-02-25 09:48:57] 2025-02-25 14:48:57,391 [wrapper] ==== wrapper stdout END ====
[2025-02-25 09:48:57] 2025-02-25 14:48:57,393 [wrapper] ==== wrapper stderr END ====
[2025-02-25 09:48:57]  *** Error codes and diagnostics ***
[2025-02-25 09:48:57]     "exeErrorCode": 0,
[2025-02-25 09:48:57]     "exeErrorDiag": "",
[2025-02-25 09:48:57]     "pilotErrorCode": 0,
[2025-02-25 09:48:57]     "pilotErrorDiag": "",
[2025-02-25 09:48:57]  *** Listing of results directory ***
[2025-02-25 09:48:57] total 431856
[2025-02-25 09:48:57] -rw-r--r--. 1 boincer umatlas    491065 Feb 25 04:08 pilot3.tar.gz
[2025-02-25 09:48:57] -rw-r--r--. 1 boincer umatlas      5118 Feb 25 04:43 queuedata.json
[2025-02-25 09:48:57] -rwx------. 1 boincer umatlas     35865 Feb 25 04:43 runpilot2-wrapper.sh
[2025-02-25 09:48:57] -rw-r--r--. 1 boincer umatlas       100 Feb 25 07:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 09:48:57] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 25 07:07 run_atlas
[2025-02-25 09:48:57] -rw-r--r--. 1 boincer umatlas       105 Feb 25 07:07 job.xml
[2025-02-25 09:48:57] -rw-r--r--. 2 boincer umatlas 249036961 Feb 25 07:07 EVNT.43401119._000017.pool.root.1
[2025-02-25 09:48:57] -rw-r--r--. 2 boincer umatlas     17569 Feb 25 07:07 start_atlas.sh
[2025-02-25 09:48:57] drwxrwx--x. 2 boincer umatlas      4096 Feb 25 07:07 shared
[2025-02-25 09:48:57] -rw-r--r--. 2 boincer umatlas    503548 Feb 25 07:07 input.tar.gz
[2025-02-25 09:48:57] -rw-r--r--. 1 boincer umatlas         0 Feb 25 07:07 boinc_lockfile
[2025-02-25 09:48:57] -rw-r--r--. 1 boincer umatlas      2538 Feb 25 07:07 pandaJob.out
[2025-02-25 09:48:57] -rw-------. 1 boincer umatlas       467 Feb 25 07:07 setup.sh.local
[2025-02-25 09:48:57] -rw-------. 1 boincer umatlas    989526 Feb 25 07:07 agis_schedconf.cvmfs.json
[2025-02-25 09:48:57] -rw-------. 1 boincer umatlas   1582519 Feb 25 07:07 agis_ddmendpoints.agis.ALL.json
[2025-02-25 09:48:57] drwx------. 4 boincer umatlas      4096 Feb 25 07:07 pilot3
[2025-02-25 09:48:57] -rw-------. 1 boincer umatlas 186725624 Feb 25 09:47 HITS.43401121._000214.pool.root.1
[2025-02-25 09:48:57] -rw-r--r--. 1 boincer umatlas       529 Feb 25 09:47 boinc_task_state.xml
[2025-02-25 09:48:57] -rw-r--r--. 1 boincer umatlas      6856 Feb 25 09:48 init_data.xml
[2025-02-25 09:48:57] -rw-------. 1 boincer umatlas        95 Feb 25 09:48 pilot_heartbeat.json
[2025-02-25 09:48:57] -rw-------. 1 boincer umatlas      1052 Feb 25 09:48 memory_monitor_summary.json
[2025-02-25 09:48:57] -rw-------. 1 boincer umatlas    363202 Feb 25 09:48 log.43401121._000214.job.log.tgz.1
[2025-02-25 09:48:57] -rw-------. 1 boincer umatlas      7747 Feb 25 09:48 heartbeat.json
[2025-02-25 09:48:57] -rw-r--r--. 1 boincer umatlas        27 Feb 25 09:48 wrapper_checkpoint.txt
[2025-02-25 09:48:57] -rw-------. 1 boincer umatlas      4338 Feb 25 09:48 pilotlog.txt
[2025-02-25 09:48:57] -rw-r--r--. 1 boincer umatlas      8192 Feb 25 09:48 boinc_mmap_file
[2025-02-25 09:48:57] -rw-------. 1 boincer umatlas    960573 Feb 25 09:48 log.43401121._000214.job.log.1
[2025-02-25 09:48:57] -rw-------. 1 boincer umatlas       357 Feb 25 09:48 output.list
[2025-02-25 09:48:57] -rw-r--r--. 1 boincer umatlas       620 Feb 25 09:48 runtime_log
[2025-02-25 09:48:57] -rw-------. 1 boincer umatlas   1341440 Feb 25 09:48 result.tar.gz
[2025-02-25 09:48:57] -rw-r--r--. 1 boincer umatlas     11423 Feb 25 09:48 runtime_log.err
[2025-02-25 09:48:57] -rw-------. 1 boincer umatlas       658 Feb 25 09:48 g6cNDmre666nsSi4ap6QjLDmwznN0nGgGQJmkKkKDme6vKDmIEYv6m.diag
[2025-02-25 09:48:57] -rw-r--r--. 1 boincer umatlas     22026 Feb 25 09:48 stderr.txt
[2025-02-25 09:48:57] HITS file was successfully produced:
[2025-02-25 09:48:57] -rw-------. 1 boincer umatlas 186725624 Feb 25 09:47 shared/HITS.pool.root.1
[2025-02-25 09:48:57]  *** Contents of shared directory: ***
[2025-02-25 09:48:57] total 427388
[2025-02-25 09:48:57] -rw-r--r--. 2 boincer umatlas 249036961 Feb 25 07:07 ATLAS.root_0
[2025-02-25 09:48:57] -rw-r--r--. 2 boincer umatlas     17569 Feb 25 07:07 start_atlas.sh
[2025-02-25 09:48:57] -rw-r--r--. 2 boincer umatlas    503548 Feb 25 07:07 input.tar.gz
[2025-02-25 09:48:57] -rw-------. 1 boincer umatlas 186725624 Feb 25 09:47 HITS.pool.root.1
[2025-02-25 09:48:57] -rw-------. 1 boincer umatlas   1341440 Feb 25 09:48 result.tar.gz
09:48:59 (3583967): run_atlas exited; CPU time 42568.402989
09:48:59 (3583967): called boinc_finish(0)

</stderr_txt>
]]>

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