Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:44:35 (2927): wrapper (7.7.26015): starting
06:44:35 (2927): wrapper: running run_atlas (--nthreads 12)
[2025-02-25 06:44:35] Arguments: --nthreads 12
[2025-02-25 06:44:35] Threads: 12
[2025-02-25 06:44:35] Checking for CVMFS
[2025-02-25 06:44:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 06:44:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 06:44:36] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 06:44:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 06:44:36] 2.11.2.0 31312 184419 159800 143037 1 58 18380423 20275200 1 130560 0 24024551 99.985 7781875 42617 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-25 06:44:36] CVMFS is ok
[2025-02-25 06:44:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 06:44:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 06:44:36] Further information can be found at the LHC@home message board.
[2025-02-25 06:44:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 06:44:36] Checking for apptainer binary...
[2025-02-25 06:44:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 06:44:36] Running /usr/bin/apptainer --version
[2025-02-25 06:44:36] apptainer version 1.3.2-1.el7
[2025-02-25 06:44:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 06:44:37] c-205-2.aglt2.org
[2025-02-25 06:44:37] apptainer works
[2025-02-25 06:44:37] Set ATHENA_PROC_NUMBER=12
[2025-02-25 06:44:37] Set ATHENA_CORE_NUMBER=12
[2025-02-25 06:44:37] Starting ATLAS job with PandaID=6530163859
[2025-02-25 06:44:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 08:08:22]  *** The last 200 lines of the pilot log: ***
[2025-02-25 08:08:22]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-25 08:08:22]  replicas=None
[2025-02-25 08:08:22]  scope=mc23_13p6TeV
[2025-02-25 08:08:22]  status=None
[2025-02-25 08:08:22]  status_code=0
[2025-02-25 08:08:22]  storage_token=
[2025-02-25 08:08:22]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6530163859/log.43401121._001632.job.log.tgz.1
[2025-02-25 08:08:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/11/33/log.43401121._001632.job.log.tgz.1
[2025-02-25 08:08:22]  workdir=None
[2025-02-25 08:08:22] ]
[2025-02-25 08:08:22] 2025-02-25 13:07:51,967 | INFO     | transferring file log.43401121._001632.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6530163859/log.43401121._001632.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-02-25 08:08:22] 2025-02-25 13:07:51,967 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6530163859/log.43401121._001632.job.log.tgz.1 /tmp/boinchome/slots/0/log.43401121._001632.job
[2025-02-25 08:08:22] 2025-02-25 13:07:51,989 | INFO     | adding to output.list: log.43401121._001632.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/11/33/log.43401121._001632.job.log.tg
[2025-02-25 08:08:22] 2025-02-25 13:07:51,990 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-25 08:08:22] 2025-02-25 13:07:51,990 | INFO     | summary of transferred files:
[2025-02-25 08:08:22] 2025-02-25 13:07:51,991 | INFO     |  -- lfn=log.43401121._001632.job.log.tgz.1, status_code=0, status=transferred
[2025-02-25 08:08:22] 2025-02-25 13:07:51,991 | INFO     | stage-out finished correctly
[2025-02-25 08:08:22] 2025-02-25 13:07:54,368 | INFO     | 4986s have passed since pilot start
[2025-02-25 08:08:22] 2025-02-25 13:07:54,416 | INFO     | monitor loop #367: job 0:6530163859 is in state 'finished'
[2025-02-25 08:08:22] 2025-02-25 13:07:54,416 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 08:08:22] 2025-02-25 13:07:54,835 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-25 08:08:22] 2025-02-25 13:07:56,918 | INFO     | monitor loop #368: job 0:6530163859 is in state 'finished'
[2025-02-25 08:08:22] 2025-02-25 13:07:56,918 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 08:08:22] 2025-02-25 13:07:57,198 | INFO     | job 6530163859 has state=finished
[2025-02-25 08:08:22] 2025-02-25 13:07:57,198 | INFO     | preparing for final server update for job 6530163859 in state='finished'
[2025-02-25 08:08:22] 2025-02-25 13:07:57,198 | INFO     | this job has now completed (state=finished)
[2025-02-25 08:08:22] 2025-02-25 13:07:57,198 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-25 08:08:22] 2025-02-25 13:07:57,199 | INFO     | log transfer has been attempted: DONE
[2025-02-25 08:08:22] 2025-02-25 13:07:57,199 | INFO     | job 6530163859 has finished - writing final server update
[2025-02-25 08:08:22] 2025-02-25 13:07:57,199 | INFO     | total number of processed events: 400 (read)
[2025-02-25 08:08:22] 2025-02-25 13:07:57,201 | INFO     | executing command: lscpu
[2025-02-25 08:08:22] 2025-02-25 13:07:57,227 | INFO     | found 12 cores (6 cores per socket, 2 sockets)
[2025-02-25 08:08:22] 2025-02-25 13:07:57,241 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-25 08:08:22] 2025-02-25 13:07:59,421 | INFO     | monitor loop #369: job 0:6530163859 is in state 'finished'
[2025-02-25 08:08:22] 2025-02-25 13:07:59,421 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 08:08:22] 2025-02-25 13:07:59,499 | INFO     | PID=6558 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-02-25 08:08:22] 2025-02-25 13:08:01,924 | INFO     | monitor loop #370: job 0:6530163859 is in state 'finished'
[2025-02-25 08:08:22] 2025-02-25 13:08:01,931 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 08:08:22] 2025-02-25 13:08:02,236 | INFO     | CPU arch script returned: x86-64-v2
[2025-02-25 08:08:22] 2025-02-25 13:08:02,237 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6530163859/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 08:08:22] 2025-02-25 13:08:02,238 | INFO     | extracted standard info from prmon json
[2025-02-25 08:08:22] 2025-02-25 13:08:02,238 | INFO     | extracted standard memory fields from prmon json
[2025-02-25 08:08:22] 2025-02-25 13:08:02,238 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-25 08:08:22] 2025-02-25 13:08:02,238 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 08:08:22] 2025-02-25 13:08:02,239 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 08:08:22] 2025-02-25 13:08:02,241 | INFO     | fitting pss+swap vs Time
[2025-02-25 08:08:22] 2025-02-25 13:08:02,241 | INFO     | model: linear, x: [1740484225.0, 1740484286.0, 1740484347.0, 1740484408.0, 1740484469.0, 1740484530.0, 1740484591.0, 1740484652.0, 1740484713.0, 1740484774.0, 1740
[2025-02-25 08:08:22] 2025-02-25 13:08:02,241 | INFO     | sum of square deviations: 130793150.0
[2025-02-25 08:08:22] 2025-02-25 13:08:02,241 | INFO     | sum of deviations: 22423386256.0
[2025-02-25 08:08:22] 2025-02-25 13:08:02,241 | INFO     | mean x: 1740486482.0
[2025-02-25 08:08:22] 2025-02-25 13:08:02,242 | INFO     | mean y: 2559342.7066666665
[2025-02-25 08:08:22] 2025-02-25 13:08:02,242 | INFO     | -- intersect: -298389219272.8599
[2025-02-25 08:08:22] 2025-02-25 13:08:02,242 | INFO     | intersect: -298389219272.8599
[2025-02-25 08:08:22] 2025-02-25 13:08:02,242 | INFO     | chi2: 1.9100537511761162
[2025-02-25 08:08:22] 2025-02-25 13:08:02,242 | INFO     | -- intersect: -298389219272.8599
[2025-02-25 08:08:22] 2025-02-25 13:08:02,242 | INFO     | current memory leak: 171.44 B/s (using 75 data points, chi2=1.91)
[2025-02-25 08:08:22] 2025-02-25 13:08:02,243 | INFO     | ..............................
[2025-02-25 08:08:22] 2025-02-25 13:08:02,243 | INFO     | . Timing measurements:
[2025-02-25 08:08:22] 2025-02-25 13:08:02,243 | INFO     | . get job = 0 s
[2025-02-25 08:08:22] 2025-02-25 13:08:02,243 | INFO     | . initial setup = 2 s
[2025-02-25 08:08:22] 2025-02-25 13:08:02,243 | INFO     | . payload setup = 7 s
[2025-02-25 08:08:22] 2025-02-25 13:08:02,243 | INFO     | . stage-in = 0 s
[2025-02-25 08:08:22] 2025-02-25 13:08:02,243 | INFO     | . payload execution = 4953 s
[2025-02-25 08:08:22] 2025-02-25 13:08:02,243 | INFO     | . stage-out = 0 s
[2025-02-25 08:08:22] 2025-02-25 13:08:02,244 | INFO     | . log creation = 0 s
[2025-02-25 08:08:22] 2025-02-25 13:08:02,244 | INFO     | ..............................
[2025-02-25 08:08:22] 2025-02-25 13:08:02,324 | INFO     | 
[2025-02-25 08:08:22] 2025-02-25 13:08:02,324 | INFO     | job summary report
[2025-02-25 08:08:22] 2025-02-25 13:08:02,325 | INFO     | --------------------------------------------------
[2025-02-25 08:08:22] 2025-02-25 13:08:02,325 | INFO     | PanDA job id: 6530163859
[2025-02-25 08:08:22] 2025-02-25 13:08:02,325 | INFO     | task id: 43401121
[2025-02-25 08:08:22] 2025-02-25 13:08:02,325 | INFO     | errors: (none)
[2025-02-25 08:08:22] 2025-02-25 13:08:02,325 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 08:08:22] 2025-02-25 13:08:02,326 | INFO     | pilot state: finished 
[2025-02-25 08:08:22] 2025-02-25 13:08:02,326 | INFO     | transexitcode: 0
[2025-02-25 08:08:22] 2025-02-25 13:08:02,326 | INFO     | exeerrorcode: 0
[2025-02-25 08:08:22] 2025-02-25 13:08:02,326 | INFO     | exeerrordiag: 
[2025-02-25 08:08:22] 2025-02-25 13:08:02,326 | INFO     | exitcode: 0
[2025-02-25 08:08:22] 2025-02-25 13:08:02,326 | INFO     | exitmsg: OK
[2025-02-25 08:08:22] 2025-02-25 13:08:02,326 | INFO     | cpuconsumptiontime: 47097 s
[2025-02-25 08:08:22] 2025-02-25 13:08:02,327 | INFO     | nevents: 400
[2025-02-25 08:08:22] 2025-02-25 13:08:02,327 | INFO     | neventsw: 0
[2025-02-25 08:08:22] 2025-02-25 13:08:02,327 | INFO     | pid: 13071
[2025-02-25 08:08:22] 2025-02-25 13:08:02,327 | INFO     | pgrp: 13071
[2025-02-25 08:08:22] 2025-02-25 13:08:02,327 | INFO     | corecount: 12
[2025-02-25 08:08:22] 2025-02-25 13:08:02,328 | INFO     | event service: False
[2025-02-25 08:08:22] 2025-02-25 13:08:02,328 | INFO     | sizes: {0: 2383363, 5: 2383569, 11: 2383625, 4964: 2409707, 4965: 2418648, 4968: 2418704, 4975: 2419002}
[2025-02-25 08:08:22] 2025-02-25 13:08:02,328 | INFO     | --------------------------------------------------
[2025-02-25 08:08:22] 2025-02-25 13:08:02,328 | INFO     | 
[2025-02-25 08:08:22] 2025-02-25 13:08:02,328 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-25 08:08:22] 2025-02-25 13:08:02,353 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 08:08:22] 2025-02-25 13:08:02,354 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 08:08:22] 2025-02-25 13:08:02,354 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 08:08:22] 2025-02-25 13:08:02,354 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 08:08:22] 2025-02-25 13:08:02,354 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 08:08:22] 2025-02-25 13:08:02,355 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 08:08:22] 2025-02-25 13:08:02,355 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 08:08:22] 2025-02-25 13:08:02,355 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 08:08:22] 2025-02-25 13:08:02,355 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 08:08:22] 2025-02-25 13:08:02,355 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 08:08:22] 2025-02-25 13:08:02,355 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 08:08:22] 2025-02-25 13:08:02,356 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 08:08:22] 2025-02-25 13:08:02,356 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 08:08:22] 2025-02-25 13:08:02,356 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 08:08:22] 2025-02-25 13:08:02,356 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 08:08:22] 2025-02-25 13:08:02,356 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 08:08:22] 2025-02-25 13:08:02,356 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 08:08:22] 2025-02-25 13:08:02,356 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 08:08:22] 2025-02-25 13:08:02,357 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 08:08:22] 2025-02-25 13:08:02,357 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 08:08:22] 2025-02-25 13:08:02,357 | INFO     | job 6530163859 has completed (purged errors)
[2025-02-25 08:08:22] 2025-02-25 13:08:02,357 | INFO     | overall cleanup function is called
[2025-02-25 08:08:22] 2025-02-25 13:08:03,365 | INFO     | --- collectZombieJob: --- 10, [13071]
[2025-02-25 08:08:22] 2025-02-25 13:08:03,365 | INFO     | zombie collector waiting for pid 13071
[2025-02-25 08:08:22] 2025-02-25 13:08:03,366 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 08:08:22] 2025-02-25 13:08:03,366 | INFO     | collected zombie processes
[2025-02-25 08:08:22] 2025-02-25 13:08:03,366 | INFO     | will attempt to kill all subprocesses of pid=13071
[2025-02-25 08:08:22] 2025-02-25 13:08:03,430 | INFO     | process IDs to be killed: [13071] (in reverse order)
[2025-02-25 08:08:22] 2025-02-25 13:08:03,482 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 08:08:22] 2025-02-25 13:08:03,482 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 08:08:22] 2025-02-25 13:08:03,486 | INFO     | did not find any defunct processes belonging to 13071
[2025-02-25 08:08:22] 2025-02-25 13:08:03,488 | INFO     | did not find any defunct processes belonging to 13071
[2025-02-25 08:08:22] 2025-02-25 13:08:03,488 | INFO     | ready for new job
[2025-02-25 08:08:22] 2025-02-25 13:08:03,488 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 08:08:22] 2025-02-25 13:08:03,489 | INFO     | **************************************
[2025-02-25 08:08:22] 2025-02-25 13:08:03,490 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 08:08:22] 2025-02-25 13:08:03,490 | INFO     | **************************************
[2025-02-25 08:08:22] 2025-02-25 13:08:03,490 | INFO     | 
[2025-02-25 08:08:22] 2025-02-25 13:08:03,490 | INFO     | architecture information:
[2025-02-25 08:08:22] 2025-02-25 13:08:03,491 | INFO     | executing command: cat /etc/os-release
[2025-02-25 08:08:22] 2025-02-25 13:08:03,507 | INFO     | cat /etc/os-release:
[2025-02-25 08:08:22] NAME="CentOS Linux"
[2025-02-25 08:08:22] VERSION="7 (Core)"
[2025-02-25 08:08:22] ID="centos"
[2025-02-25 08:08:22] ID_LIKE="rhel fedora"
[2025-02-25 08:08:22] VERSION_ID="7"
[2025-02-25 08:08:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 08:08:22] ANSI_COLOR="0;31"
[2025-02-25 08:08:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 08:08:22] HOME_URL="https://www.centos.org/"
[2025-02-25 08:08:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 08:08:22] 
[2025-02-25 08:08:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 08:08:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 08:08:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 08:08:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 08:08:22] 
[2025-02-25 08:08:22] 2025-02-25 13:08:03,507 | INFO     | **************************************
[2025-02-25 08:08:22] 2025-02-25 13:08:04,010 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-25 08:08:22] 2025-02-25 13:08:04,026 | INFO     | sufficient remaining disk space (29434576896 B)
[2025-02-25 08:08:22] 2025-02-25 13:08:04,027 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 08:08:22] 2025-02-25 13:08:04,027 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 08:08:22] 2025-02-25 13:08:04,027 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-25 08:08:22] 2025-02-25 13:08:04,027 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 08:08:22] 2025-02-25 13:08:04,028 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 08:08:22] 2025-02-25 13:08:04,028 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 08:08:22] 2025-02-25 13:08:04,028 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 08:08:22] 2025-02-25 13:08:04,154 | INFO     | all payload control threads have been joined
[2025-02-25 08:08:22] 2025-02-25 13:08:04,435 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-02-25 08:08:22] 2025-02-25 13:08:04,435 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-02-25 08:08:22] 2025-02-25 13:08:04,435 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 08:08:22] 2025-02-25 13:08:04,435 | INFO     | will abort loop
[2025-02-25 08:08:22] 2025-02-25 13:08:04,441 | INFO     | all data control threads have been joined
[2025-02-25 08:08:22] 2025-02-25 13:08:05,031 | INFO     | [job] queue monitor thread has finished
[2025-02-25 08:08:22] 2025-02-25 13:08:05,032 | INFO     | [job] retrieve thread has finished
[2025-02-25 08:08:22] 2025-02-25 13:08:05,037 | INFO     | [payload] validate_post thread has finished
[2025-02-25 08:08:22] 2025-02-25 13:08:05,073 | INFO     | [data] copytool_in thread has finished
[2025-02-25 08:08:22] 2025-02-25 13:08:05,096 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 08:08:22] 2025-02-25 13:08:05,160 | INFO     | [payload] control thread has finished
[2025-02-25 08:08:22] 2025-02-25 13:08:05,425 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 08:08:22] 2025-02-25 13:08:05,441 | INFO     | [job] job monitor thread has finished
[2025-02-25 08:08:22] 2025-02-25 13:08:05,447 | INFO     | [data] control thread has finished
[2025-02-25 08:08:22] 2025-02-25 13:08:05,559 | INFO     | all job control threads have been joined
[2025-02-25 08:08:22] 2025-02-25 13:08:05,651 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 08:08:22] 2025-02-25 13:08:05,967 | INFO     | [job] validate thread has finished
[2025-02-25 08:08:22] 2025-02-25 13:08:05,988 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 08:08:22] 2025-02-25 13:08:05,993 | INFO     | [payload] failed_post thread has finished
[2025-02-25 08:08:22] 2025-02-25 13:08:06,134 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 08:08:22] 2025-02-25 13:08:06,564 | INFO     | [job] control thread has finished
[2025-02-25 08:08:22] 2025-02-25 13:08:07,102 | INFO     | [data] copytool_out thread has finished
[2025-02-25 08:08:22] 2025-02-25 13:08:09,427 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 08:08:22] 2025-02-25 13:08:14,872 | INFO     | job.realtimelogging is not enabled
[2025-02-25 08:08:22] 2025-02-25 13:08:15,878 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 08:08:22] 2025-02-25 13:08:16,955 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140630235957056)>', '<ExcThread(monitor, started 140629409511168)>']
[2025-02-25 08:08:22] 2025-02-25 13:08:17,095 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 08:08:22] 2025-02-25 13:08:17,095 | INFO     | [monitor] control thread has ended
[2025-02-25 08:08:22] 2025-02-25 13:08:21,971 | INFO     | all workflow threads have been joined
[2025-02-25 08:08:22] 2025-02-25 13:08:21,971 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 08:08:22] 2025-02-25 13:08:21,971 | INFO     | traces error code: 0
[2025-02-25 08:08:22] 2025-02-25 13:08:21,972 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 08:08:22] 2025-02-25 13:08:22,056 [wrapper] ==== pilot stdout END ====
[2025-02-25 08:08:22] 2025-02-25 13:08:22,061 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 08:08:22] 2025-02-25 13:08:22,065 [wrapper] pilotpid: 6558
[2025-02-25 08:08:22] 2025-02-25 13:08:22,069 [wrapper] Pilot exit status: 0
[2025-02-25 08:08:22] 2025-02-25 13:08:22,085 [wrapper] pandaids: 6530163859
[2025-02-25 08:08:22] 2025-02-25 13:08:22,125 [wrapper] cleanup supervisor_pilot 28627 6559
[2025-02-25 08:08:22] 2025-02-25 13:08:22,129 [wrapper] Test setup, not cleaning
[2025-02-25 08:08:22] 2025-02-25 13:08:22,136 [wrapper] apfmon messages muted
[2025-02-25 08:08:22] 2025-02-25 13:08:22,140 [wrapper] ==== wrapper stdout END ====
[2025-02-25 08:08:22] 2025-02-25 13:08:22,144 [wrapper] ==== wrapper stderr END ====
[2025-02-25 08:08:22]  *** Error codes and diagnostics ***
[2025-02-25 08:08:22]     "exeErrorCode": 0,
[2025-02-25 08:08:22]     "exeErrorDiag": "",
[2025-02-25 08:08:22]     "pilotErrorCode": 0,
[2025-02-25 08:08:22]     "pilotErrorDiag": "",
[2025-02-25 08:08:22]  *** Listing of results directory ***
[2025-02-25 08:08:22] total 429144
[2025-02-25 08:08:22] -rw-r--r-- 1 boincer umatlas    491065 Feb 25 06:17 pilot3.tar.gz
[2025-02-25 08:08:22] -rw-r--r-- 1 boincer umatlas      5118 Feb 25 06:42 queuedata.json
[2025-02-25 08:08:22] -rwx------ 1 boincer umatlas     35865 Feb 25 06:43 runpilot2-wrapper.sh
[2025-02-25 08:08:22] -rw-r--r-- 1 boincer umatlas       100 Feb 25 06:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 08:08:22] -rwxr-xr-x 1 boincer umatlas      7986 Feb 25 06:44 run_atlas
[2025-02-25 08:08:22] -rw-r--r-- 1 boincer umatlas       105 Feb 25 06:44 job.xml
[2025-02-25 08:08:22] -rw-r--r-- 2 boincer umatlas 250464118 Feb 25 06:44 EVNT.43401119._000068.pool.root.1
[2025-02-25 08:08:22] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 06:44 start_atlas.sh
[2025-02-25 08:08:22] drwxrwx--x 2 boincer umatlas      4096 Feb 25 06:44 shared
[2025-02-25 08:08:22] -rw-r--r-- 2 boincer umatlas    503544 Feb 25 06:44 input.tar.gz
[2025-02-25 08:08:22] -rw-r--r-- 1 boincer umatlas         0 Feb 25 06:44 boinc_lockfile
[2025-02-25 08:08:22] -rw-r--r-- 1 boincer umatlas      2548 Feb 25 06:44 pandaJob.out
[2025-02-25 08:08:22] -rw------- 1 boincer umatlas       424 Feb 25 06:44 setup.sh.local
[2025-02-25 08:08:22] -rw------- 1 boincer umatlas    989526 Feb 25 06:44 agis_schedconf.cvmfs.json
[2025-02-25 08:08:22] -rw------- 1 boincer umatlas   1582519 Feb 25 06:44 agis_ddmendpoints.agis.ALL.json
[2025-02-25 08:08:22] drwx------ 4 boincer umatlas      4096 Feb 25 06:44 pilot3
[2025-02-25 08:08:22] -rw-r--r-- 1 boincer umatlas      5868 Feb 25 08:04 init_data.xml
[2025-02-25 08:08:22] -rw------- 1 boincer umatlas 183520722 Feb 25 08:07 HITS.43401121._001632.pool.root.1
[2025-02-25 08:08:22] -rw-r--r-- 1 boincer umatlas       530 Feb 25 08:07 boinc_task_state.xml
[2025-02-25 08:08:22] -rw------- 1 boincer umatlas      1043 Feb 25 08:07 memory_monitor_summary.json
[2025-02-25 08:08:22] -rw------- 1 boincer umatlas        95 Feb 25 08:07 pilot_heartbeat.json
[2025-02-25 08:08:22] -rw------- 1 boincer umatlas    360097 Feb 25 08:07 log.43401121._001632.job.log.tgz.1
[2025-02-25 08:08:22] -rw------- 1 boincer umatlas      7759 Feb 25 08:08 heartbeat.json
[2025-02-25 08:08:22] -rw-r--r-- 1 boincer umatlas      8192 Feb 25 08:08 boinc_mmap_file
[2025-02-25 08:08:22] -rw-r--r-- 1 boincer umatlas        27 Feb 25 08:08 wrapper_checkpoint.txt
[2025-02-25 08:08:22] -rw------- 1 boincer umatlas      4596 Feb 25 08:08 pilotlog.txt
[2025-02-25 08:08:22] -rw------- 1 boincer umatlas    467740 Feb 25 08:08 log.43401121._001632.job.log.1
[2025-02-25 08:08:22] -rw------- 1 boincer umatlas       357 Feb 25 08:08 output.list
[2025-02-25 08:08:22] -rw-r--r-- 1 boincer umatlas       620 Feb 25 08:08 runtime_log
[2025-02-25 08:08:22] -rw------- 1 boincer umatlas    849920 Feb 25 08:08 result.tar.gz
[2025-02-25 08:08:22] -rw------- 1 boincer umatlas       657 Feb 25 08:08 UIdMDmIW866n9Rq4apOajLDm4fhM0noT9bVoFjIUDmxSfKDm7LG1Ro.diag
[2025-02-25 08:08:22] -rw-r--r-- 1 boincer umatlas     11010 Feb 25 08:08 runtime_log.err
[2025-02-25 08:08:22] -rw-r--r-- 1 boincer umatlas     21995 Feb 25 08:08 stderr.txt
[2025-02-25 08:08:22] HITS file was successfully produced:
[2025-02-25 08:08:22] -rw------- 1 boincer umatlas 183520722 Feb 25 08:07 shared/HITS.pool.root.1
[2025-02-25 08:08:22]  *** Contents of shared directory: ***
[2025-02-25 08:08:22] total 425160
[2025-02-25 08:08:22] -rw-r--r-- 2 boincer umatlas 250464118 Feb 25 06:44 ATLAS.root_0
[2025-02-25 08:08:22] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 06:44 start_atlas.sh
[2025-02-25 08:08:22] -rw-r--r-- 2 boincer umatlas    503544 Feb 25 06:44 input.tar.gz
[2025-02-25 08:08:22] -rw------- 1 boincer umatlas 183520722 Feb 25 08:07 HITS.pool.root.1
[2025-02-25 08:08:22] -rw------- 1 boincer umatlas    849920 Feb 25 08:08 result.tar.gz
08:08:23 (2927): run_atlas exited; CPU time 47034.640101
08:08:23 (2927): called boinc_finish(0)

</stderr_txt>
]]>

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