Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:47:45 (329225): wrapper (7.7.26015): starting
05:47:45 (329225): wrapper: running run_atlas (--nthreads 8)
[2025-02-25 05:47:45] Arguments: --nthreads 8
[2025-02-25 05:47:45] Threads: 8
[2025-02-25 05:47:45] Checking for CVMFS
[2025-02-25 05:47:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 05:47:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 05:47:46] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 05:47:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 05:47:46] 2.11.5.0 2369143 37002 261040 143035 2 172 26701828 37653504 31994 130560 0 3580420 98.993 8562888 36827 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-02-25 05:47:46] CVMFS is ok
[2025-02-25 05:47:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 05:47:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 05:47:46] Further information can be found at the LHC@home message board.
[2025-02-25 05:47:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 05:47:46] Checking for apptainer binary...
[2025-02-25 05:47:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 05:47:46] Running /usr/bin/apptainer --version
[2025-02-25 05:47:46] apptainer version 1.3.6-1.el9
[2025-02-25 05:47:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 05:47:47] c6-6-8-2.aglt2.org
[2025-02-25 05:47:47] apptainer works
[2025-02-25 05:47:47] Set ATHENA_PROC_NUMBER=8
[2025-02-25 05:47:47] Set ATHENA_CORE_NUMBER=8
[2025-02-25 05:47:47] Starting ATLAS job with PandaID=6530099347
[2025-02-25 05:47:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 07:42:28]  *** The last 200 lines of the pilot log: ***
[2025-02-25 07:42:28] 2025-02-25 12:42:14,057 | INFO     | -- intersect: -196387570452.04764
[2025-02-25 07:42:28] 2025-02-25 12:42:14,057 | INFO     | intersect: -196387570452.04764
[2025-02-25 07:42:28] 2025-02-25 12:42:14,058 | INFO     | chi2: 4.723660280855714
[2025-02-25 07:42:28] 2025-02-25 12:42:14,058 | INFO     | model: linear, x: [1740480590.0, 1740480651.0, 1740480712.0, 1740480773.0, 1740480834.0, 1740480895.0, 1740480956.0, 1740481017.0, 1740481078.0, 1740481139.0, 1740
[2025-02-25 07:42:28] 2025-02-25 12:42:14,058 | INFO     | sum of square deviations: 369281342.5
[2025-02-25 07:42:28] 2025-02-25 12:42:14,059 | INFO     | sum of deviations: 52331253583.0
[2025-02-25 07:42:28] 2025-02-25 12:42:14,059 | INFO     | mean x: 1740483792.5
[2025-02-25 07:42:28] 2025-02-25 12:42:14,059 | INFO     | mean y: 2339149.849056604
[2025-02-25 07:42:28] 2025-02-25 12:42:14,059 | INFO     | -- intersect: -246643478604.72394
[2025-02-25 07:42:28] 2025-02-25 12:42:14,059 | INFO     | intersect: -246643478604.72394
[2025-02-25 07:42:28] 2025-02-25 12:42:14,059 | INFO     | chi2: 3.941229344568404
[2025-02-25 07:42:28] 2025-02-25 12:42:14,060 | INFO     | current chi2=3.941229344568404 (change=16.564081448837157 %)
[2025-02-25 07:42:28] 2025-02-25 12:42:14,060 | INFO     | right removable region: 105
[2025-02-25 07:42:28] 2025-02-25 12:42:14,060 | INFO     | model: linear, x: [1740480895.0, 1740480956.0, 1740481017.0, 1740481078.0, 1740481139.0, 1740481200.0, 1740481261.0, 1740481322.0, 1740481383.0, 1740481444.0, 1740
[2025-02-25 07:42:28] 2025-02-25 12:42:14,060 | INFO     | sum of square deviations: 369281342.5
[2025-02-25 07:42:28] 2025-02-25 12:42:14,061 | INFO     | sum of deviations: 23170861010.499992
[2025-02-25 07:42:28] 2025-02-25 12:42:14,061 | INFO     | mean x: 1740484097.5
[2025-02-25 07:42:28] 2025-02-25 12:42:14,061 | INFO     | mean y: 2395671.3113207547
[2025-02-25 07:42:28] 2025-02-25 12:42:14,061 | INFO     | -- intersect: -109205707941.87898
[2025-02-25 07:42:28] 2025-02-25 12:42:14,061 | INFO     | intersect: -109205707941.87898
[2025-02-25 07:42:28] 2025-02-25 12:42:14,061 | INFO     | chi2: 2.5196836381774466
[2025-02-25 07:42:28] 2025-02-25 12:42:14,061 | INFO     | current chi2=2.5196836381774466 (change=46.6582377147369 %)
[2025-02-25 07:42:28] 2025-02-25 12:42:14,061 | INFO     | model: linear, x: [1740481200.0, 1740481261.0, 1740481322.0, 1740481383.0, 1740481444.0, 1740481505.0, 1740481566.0, 1740481627.0, 1740481688.0, 1740481749.0, 1740
[2025-02-25 07:42:28] 2025-02-25 12:42:14,062 | INFO     | sum of square deviations: 319447850.0
[2025-02-25 07:42:28] 2025-02-25 12:42:14,062 | INFO     | sum of deviations: 5358559945.000001
[2025-02-25 07:42:28] 2025-02-25 12:42:14,062 | INFO     | mean x: 1740484250.0
[2025-02-25 07:42:28] 2025-02-25 12:42:14,062 | INFO     | mean y: 2450299.792079208
[2025-02-25 07:42:28] 2025-02-25 12:42:14,062 | INFO     | -- intersect: -29193204599.601883
[2025-02-25 07:42:28] 2025-02-25 12:42:14,062 | INFO     | intersect: -29193204599.601883
[2025-02-25 07:42:28] 2025-02-25 12:42:14,064 | INFO     | chi2: 1.4618383662391723
[2025-02-25 07:42:28] 2025-02-25 12:42:14,064 | INFO     | current chi2=1.4618383662391723 (change=41.98325757686951 %)
[2025-02-25 07:42:28] 2025-02-25 12:42:14,064 | INFO     | model: linear, x: [1740481505.0, 1740481566.0, 1740481627.0, 1740481688.0, 1740481749.0, 1740481810.0, 1740481871.0, 1740481932.0, 1740481993.0, 1740482054.0, 1740
[2025-02-25 07:42:28] 2025-02-25 12:42:14,064 | INFO     | sum of square deviations: 274312120.0
[2025-02-25 07:42:28] 2025-02-25 12:42:14,064 | INFO     | sum of deviations: -6691513858.5
[2025-02-25 07:42:28] 2025-02-25 12:42:14,065 | INFO     | mean x: 1740484402.5
[2025-02-25 07:42:28] 2025-02-25 12:42:14,065 | INFO     | mean y: 2490402.1354166665
[2025-02-25 07:42:28] 2025-02-25 12:42:14,065 | INFO     | -- intersect: 42459511622.4586
[2025-02-25 07:42:28] 2025-02-25 12:42:14,065 | INFO     | intersect: 42459511622.4586
[2025-02-25 07:42:28] 2025-02-25 12:42:14,065 | INFO     | chi2: 0.7759158893843822
[2025-02-25 07:42:28] 2025-02-25 12:42:14,065 | INFO     | current chi2=0.7759158893843822 (change=46.92190961025618 %)
[2025-02-25 07:42:28] 2025-02-25 12:42:14,065 | INFO     | model: linear, x: [1740481810.0, 1740481871.0, 1740481932.0, 1740481993.0, 1740482054.0, 1740482115.0, 1740482176.0, 1740482237.0, 1740482298.0, 1740482359.0, 1740
[2025-02-25 07:42:28] 2025-02-25 12:42:14,066 | INFO     | sum of square deviations: 233641590.0
[2025-02-25 07:42:28] 2025-02-25 12:42:14,070 | INFO     | sum of deviations: -5306384205.0
[2025-02-25 07:42:28] 2025-02-25 12:42:14,070 | INFO     | mean x: 1740484555.0
[2025-02-25 07:42:28] 2025-02-25 12:42:14,070 | INFO     | mean y: 2485177.087912088
[2025-02-25 07:42:28] 2025-02-25 12:42:14,070 | INFO     | -- intersect: 39531747718.48071
[2025-02-25 07:42:28] 2025-02-25 12:42:14,070 | INFO     | intersect: 39531747718.48071
[2025-02-25 07:42:28] 2025-02-25 12:42:14,071 | INFO     | chi2: 0.773119309840335
[2025-02-25 07:42:28] 2025-02-25 12:42:14,071 | INFO     | current chi2=0.773119309840335 (change=0.36042302810244625 %)
[2025-02-25 07:42:28] 2025-02-25 12:42:14,071 | INFO     | left removable region: 40
[2025-02-25 07:42:28] 2025-02-25 12:42:14,071 | INFO     | model: linear, x: [1740483030.0, 1740483091.0, 1740483152.0, 1740483213.0, 1740483274.0, 1740483335.0, 1740483396.0, 1740483457.0, 1740483518.0, 1740483579.0, 1740
[2025-02-25 07:42:28] 2025-02-25 12:42:14,071 | INFO     | sum of square deviations: 85136480.0
[2025-02-25 07:42:28] 2025-02-25 12:42:14,071 | INFO     | sum of deviations: 169618369.0
[2025-02-25 07:42:28] 2025-02-25 12:42:14,071 | INFO     | mean x: 1740484982.0
[2025-02-25 07:42:28] 2025-02-25 12:42:14,072 | INFO     | mean y: 2511377.4307692307
[2025-02-25 07:42:28] 2025-02-25 12:42:14,072 | INFO     | -- intersect: -3465076475.8118634
[2025-02-25 07:42:28] 2025-02-25 12:42:14,072 | INFO     | intersect: -3465076475.8118634
[2025-02-25 07:42:28] 2025-02-25 12:42:14,072 | INFO     | chi2: 6.370448616620357e-05
[2025-02-25 07:42:28] 2025-02-25 12:42:14,072 | INFO     | -- intersect: -3465076475.8118634
[2025-02-25 07:42:28] 2025-02-25 12:42:14,072 | INFO     | current memory leak: 1.99 B/s (using 65 data points, chi2=0.00)
[2025-02-25 07:42:28] 2025-02-25 12:42:14,073 | INFO     | ..............................
[2025-02-25 07:42:28] 2025-02-25 12:42:14,073 | INFO     | . Timing measurements:
[2025-02-25 07:42:28] 2025-02-25 12:42:14,073 | INFO     | . get job = 0 s
[2025-02-25 07:42:28] 2025-02-25 12:42:14,073 | INFO     | . initial setup = 4 s
[2025-02-25 07:42:28] 2025-02-25 12:42:14,073 | INFO     | . payload setup = 20 s
[2025-02-25 07:42:28] 2025-02-25 12:42:14,073 | INFO     | . stage-in = 0 s
[2025-02-25 07:42:28] 2025-02-25 12:42:14,073 | INFO     | . payload execution = 6750 s
[2025-02-25 07:42:28] 2025-02-25 12:42:14,073 | INFO     | . stage-out = 0 s
[2025-02-25 07:42:28] 2025-02-25 12:42:14,073 | INFO     | . log creation = 0 s
[2025-02-25 07:42:28] 2025-02-25 12:42:14,073 | INFO     | ..............................
[2025-02-25 07:42:28] 2025-02-25 12:42:14,169 | INFO     | 
[2025-02-25 07:42:28] 2025-02-25 12:42:14,170 | INFO     | job summary report
[2025-02-25 07:42:28] 2025-02-25 12:42:14,170 | INFO     | --------------------------------------------------
[2025-02-25 07:42:28] 2025-02-25 12:42:14,170 | INFO     | PanDA job id: 6530099347
[2025-02-25 07:42:28] 2025-02-25 12:42:14,170 | INFO     | task id: 43401121
[2025-02-25 07:42:28] 2025-02-25 12:42:14,170 | INFO     | errors: (none)
[2025-02-25 07:42:28] 2025-02-25 12:42:14,170 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 07:42:28] 2025-02-25 12:42:14,170 | INFO     | pilot state: finished 
[2025-02-25 07:42:28] 2025-02-25 12:42:14,170 | INFO     | transexitcode: 0
[2025-02-25 07:42:28] 2025-02-25 12:42:14,171 | INFO     | exeerrorcode: 0
[2025-02-25 07:42:28] 2025-02-25 12:42:14,171 | INFO     | exeerrordiag: 
[2025-02-25 07:42:28] 2025-02-25 12:42:14,171 | INFO     | exitcode: 0
[2025-02-25 07:42:28] 2025-02-25 12:42:14,171 | INFO     | exitmsg: OK
[2025-02-25 07:42:28] 2025-02-25 12:42:14,171 | INFO     | cpuconsumptiontime: 43042 s
[2025-02-25 07:42:28] 2025-02-25 12:42:14,171 | INFO     | nevents: 400
[2025-02-25 07:42:28] 2025-02-25 12:42:14,171 | INFO     | neventsw: 0
[2025-02-25 07:42:28] 2025-02-25 12:42:14,171 | INFO     | pid: 348103
[2025-02-25 07:42:28] 2025-02-25 12:42:14,171 | INFO     | pgrp: 348103
[2025-02-25 07:42:28] 2025-02-25 12:42:14,171 | INFO     | corecount: 8
[2025-02-25 07:42:28] 2025-02-25 12:42:14,171 | INFO     | event service: False
[2025-02-25 07:42:28] 2025-02-25 12:42:14,171 | INFO     | sizes: {0: 2383131, 1: 2383215, 2: 2383414, 13: 2383414, 20: 2383676, 24: 2383704, 6774: 2410867, 6776: 2419808, 6777: 2419864, 6784: 2420034}
[2025-02-25 07:42:28] 2025-02-25 12:42:14,171 | INFO     | --------------------------------------------------
[2025-02-25 07:42:28] 2025-02-25 12:42:14,171 | INFO     | 
[2025-02-25 07:42:28] 2025-02-25 12:42:14,172 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-02-25 07:42:28] 2025-02-25 12:42:14,189 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 07:42:28] 2025-02-25 12:42:14,189 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 07:42:28] 2025-02-25 12:42:14,189 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 07:42:28] 2025-02-25 12:42:14,189 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 07:42:28] 2025-02-25 12:42:14,189 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 07:42:28] 2025-02-25 12:42:14,189 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 07:42:28] 2025-02-25 12:42:14,189 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 07:42:28] 2025-02-25 12:42:14,190 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 07:42:28] 2025-02-25 12:42:14,190 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 07:42:28] 2025-02-25 12:42:14,190 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 07:42:28] 2025-02-25 12:42:14,190 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 07:42:28] 2025-02-25 12:42:14,190 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 07:42:28] 2025-02-25 12:42:14,190 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 07:42:28] 2025-02-25 12:42:14,190 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 07:42:28] 2025-02-25 12:42:14,190 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 07:42:28] 2025-02-25 12:42:14,190 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 07:42:28] 2025-02-25 12:42:14,190 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 07:42:28] 2025-02-25 12:42:14,190 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 07:42:28] 2025-02-25 12:42:14,190 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 07:42:28] 2025-02-25 12:42:14,190 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 07:42:28] 2025-02-25 12:42:14,191 | INFO     | job 6530099347 has completed (purged errors)
[2025-02-25 07:42:28] 2025-02-25 12:42:14,191 | INFO     | overall cleanup function is called
[2025-02-25 07:42:28] 2025-02-25 12:42:15,199 | INFO     | --- collectZombieJob: --- 10, [348103]
[2025-02-25 07:42:28] 2025-02-25 12:42:15,200 | INFO     | zombie collector waiting for pid 348103
[2025-02-25 07:42:28] 2025-02-25 12:42:15,200 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 07:42:28] 2025-02-25 12:42:15,200 | INFO     | collected zombie processes
[2025-02-25 07:42:28] 2025-02-25 12:42:15,200 | INFO     | will attempt to kill all subprocesses of pid=348103
[2025-02-25 07:42:28] 2025-02-25 12:42:15,418 | INFO     | process IDs to be killed: [348103] (in reverse order)
[2025-02-25 07:42:28] 2025-02-25 12:42:15,528 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 07:42:28] 2025-02-25 12:42:15,529 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 07:42:28] 2025-02-25 12:42:15,544 | INFO     | did not find any defunct processes belonging to 348103
[2025-02-25 07:42:28] 2025-02-25 12:42:15,560 | INFO     | did not find any defunct processes belonging to 348103
[2025-02-25 07:42:28] 2025-02-25 12:42:15,560 | INFO     | ready for new job
[2025-02-25 07:42:28] 2025-02-25 12:42:15,560 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 07:42:28] 2025-02-25 12:42:15,562 | INFO     | **************************************
[2025-02-25 07:42:28] 2025-02-25 12:42:15,562 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 07:42:28] 2025-02-25 12:42:15,562 | INFO     | **************************************
[2025-02-25 07:42:28] 2025-02-25 12:42:15,562 | INFO     | 
[2025-02-25 07:42:28] 2025-02-25 12:42:15,567 | INFO     | architecture information:
[2025-02-25 07:42:28] 2025-02-25 12:42:15,568 | INFO     | executing command: cat /etc/os-release
[2025-02-25 07:42:28] 2025-02-25 12:42:15,582 | INFO     | cat /etc/os-release:
[2025-02-25 07:42:28] NAME="CentOS Linux"
[2025-02-25 07:42:28] VERSION="7 (Core)"
[2025-02-25 07:42:28] ID="centos"
[2025-02-25 07:42:28] ID_LIKE="rhel fedora"
[2025-02-25 07:42:28] VERSION_ID="7"
[2025-02-25 07:42:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 07:42:28] ANSI_COLOR="0;31"
[2025-02-25 07:42:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 07:42:28] HOME_URL="https://www.centos.org/"
[2025-02-25 07:42:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 07:42:28] 
[2025-02-25 07:42:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 07:42:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 07:42:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 07:42:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 07:42:28] 
[2025-02-25 07:42:28] 2025-02-25 12:42:15,583 | INFO     | **************************************
[2025-02-25 07:42:28] 2025-02-25 12:42:16,085 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-02-25 07:42:28] 2025-02-25 12:42:16,103 | INFO     | sufficient remaining disk space (73433874432 B)
[2025-02-25 07:42:28] 2025-02-25 12:42:16,103 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 07:42:28] 2025-02-25 12:42:16,103 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 07:42:28] 2025-02-25 12:42:16,103 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 07:42:28] 2025-02-25 12:42:16,160 | INFO     | all payload control threads have been joined
[2025-02-25 07:42:28] 2025-02-25 12:42:16,565 | INFO     | all data control threads have been joined
[2025-02-25 07:42:28] 2025-02-25 12:42:16,684 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 07:42:28] 2025-02-25 12:42:16,693 | INFO     | all job control threads have been joined
[2025-02-25 07:42:28] 2025-02-25 12:42:16,954 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 07:42:28] 2025-02-25 12:42:16,954 | INFO     | aborting loop
[2025-02-25 07:42:28] 2025-02-25 12:42:17,077 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 07:42:28] 2025-02-25 12:42:17,077 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 07:42:28] 2025-02-25 12:42:17,077 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 07:42:28] 2025-02-25 12:42:17,109 | INFO     | [job] retrieve thread has finished
[2025-02-25 07:42:28] 2025-02-25 12:42:17,109 | INFO     | [job] queue monitor thread has finished
[2025-02-25 07:42:28] 2025-02-25 12:42:17,168 | INFO     | [payload] control thread has finished
[2025-02-25 07:42:28] 2025-02-25 12:42:17,561 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 07:42:28] 2025-02-25 12:42:17,572 | INFO     | [data] control thread has finished
[2025-02-25 07:42:28] 2025-02-25 12:42:17,700 | INFO     | [job] control thread has finished
[2025-02-25 07:42:28] 2025-02-25 12:42:17,773 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 07:42:28] 2025-02-25 12:42:17,782 | INFO     | [data] copytool_in thread has finished
[2025-02-25 07:42:28] 2025-02-25 12:42:17,842 | INFO     | [job] validate thread has finished
[2025-02-25 07:42:28] 2025-02-25 12:42:17,960 | INFO     | [job] job monitor thread has finished
[2025-02-25 07:42:28] 2025-02-25 12:42:17,993 | INFO     | [payload] validate_post thread has finished
[2025-02-25 07:42:28] 2025-02-25 12:42:18,097 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 07:42:28] 2025-02-25 12:42:18,281 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 07:42:28] 2025-02-25 12:42:18,391 | INFO     | [payload] failed_post thread has finished
[2025-02-25 07:42:28] 2025-02-25 12:42:18,594 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 07:42:28] 2025-02-25 12:42:18,690 | INFO     | [data] copytool_out thread has finished
[2025-02-25 07:42:28] 2025-02-25 12:42:21,796 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 07:42:28] 2025-02-25 12:42:23,240 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140678189479744)>', '<ExcThread(monitor, started 140677560137472)>']
[2025-02-25 07:42:28] 2025-02-25 12:42:24,117 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 07:42:28] 2025-02-25 12:42:24,118 | INFO     | [monitor] control thread has ended
[2025-02-25 07:42:28] 2025-02-25 12:42:28,265 | INFO     | all workflow threads have been joined
[2025-02-25 07:42:28] 2025-02-25 12:42:28,266 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 07:42:28] 2025-02-25 12:42:28,266 | INFO     | traces error code: 0
[2025-02-25 07:42:28] 2025-02-25 12:42:28,266 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 07:42:28] 2025-02-25 12:42:28,543 [wrapper] ==== pilot stdout END ====
[2025-02-25 07:42:28] 2025-02-25 12:42:28,551 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 07:42:28] 2025-02-25 12:42:28,553 [wrapper] pilotpid: 338120
[2025-02-25 07:42:28] 2025-02-25 12:42:28,555 [wrapper] Pilot exit status: 0
[2025-02-25 07:42:28] 2025-02-25 12:42:28,596 [wrapper] pandaids: 6530099347
[2025-02-25 07:42:28] 2025-02-25 12:42:28,703 [wrapper] cleanup supervisor_pilot  812206 338121
[2025-02-25 07:42:28] 2025-02-25 12:42:28,706 [wrapper] Test setup, not cleaning
[2025-02-25 07:42:28] 2025-02-25 12:42:28,712 [wrapper] apfmon messages muted
[2025-02-25 07:42:28] 2025-02-25 12:42:28,715 [wrapper] ==== wrapper stdout END ====
[2025-02-25 07:42:28] 2025-02-25 12:42:28,717 [wrapper] ==== wrapper stderr END ====
[2025-02-25 07:42:28]  *** Error codes and diagnostics ***
[2025-02-25 07:42:28]     "exeErrorCode": 0,
[2025-02-25 07:42:28]     "exeErrorDiag": "",
[2025-02-25 07:42:28]     "pilotErrorCode": 0,
[2025-02-25 07:42:28]     "pilotErrorDiag": "",
[2025-02-25 07:42:28]  *** Listing of results directory ***
[2025-02-25 07:42:28] total 438700
[2025-02-25 07:42:28] -rw-r--r-- 1 boincer umatlas    491065 Feb 25 05:12 pilot3.tar.gz
[2025-02-25 07:42:28] -rwx------ 1 boincer umatlas     35865 Feb 25 05:46 runpilot2-wrapper.sh
[2025-02-25 07:42:28] -rw-r--r-- 1 boincer umatlas      5118 Feb 25 05:46 queuedata.json
[2025-02-25 07:42:28] -rw-r--r-- 1 boincer umatlas       100 Feb 25 05:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 07:42:28] -rwxr-xr-x 1 boincer umatlas      7986 Feb 25 05:47 run_atlas
[2025-02-25 07:42:28] -rw-r--r-- 1 boincer umatlas       105 Feb 25 05:47 job.xml
[2025-02-25 07:42:28] -rw-r--r-- 2 boincer umatlas 254796724 Feb 25 05:47 EVNT.43401119._000007.pool.root.1
[2025-02-25 07:42:28] -rw-r--r-- 2 boincer umatlas    503543 Feb 25 05:47 input.tar.gz
[2025-02-25 07:42:28] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 05:47 start_atlas.sh
[2025-02-25 07:42:28] drwxrwx--x 2 boincer umatlas      4096 Feb 25 05:47 shared
[2025-02-25 07:42:28] -rw-r--r-- 1 boincer umatlas         0 Feb 25 05:47 boinc_lockfile
[2025-02-25 07:42:28] -rw-r--r-- 1 boincer umatlas      2546 Feb 25 05:47 pandaJob.out
[2025-02-25 07:42:28] -rw------- 1 boincer umatlas       467 Feb 25 05:47 setup.sh.local
[2025-02-25 07:42:28] -rw------- 1 boincer umatlas    988817 Feb 25 05:48 agis_schedconf.cvmfs.json
[2025-02-25 07:42:28] -rw------- 1 boincer umatlas   1582519 Feb 25 05:48 agis_ddmendpoints.agis.ALL.json
[2025-02-25 07:42:28] drwx------ 4 boincer umatlas      4096 Feb 25 05:48 pilot3
[2025-02-25 07:42:28] -rw-r--r-- 1 boincer umatlas      6855 Feb 25 07:37 init_data.xml
[2025-02-25 07:42:28] -rw------- 1 boincer umatlas 188626344 Feb 25 07:41 HITS.43401121._000500.pool.root.1
[2025-02-25 07:42:28] -rw-r--r-- 1 boincer umatlas       530 Feb 25 07:41 boinc_task_state.xml
[2025-02-25 07:42:28] -rw------- 1 boincer umatlas        95 Feb 25 07:41 pilot_heartbeat.json
[2025-02-25 07:42:28] -rw------- 1 boincer umatlas      1050 Feb 25 07:42 memory_monitor_summary.json
[2025-02-25 07:42:28] -rw------- 1 boincer umatlas    343197 Feb 25 07:42 log.43401121._000500.job.log.tgz.1
[2025-02-25 07:42:28] -rw------- 1 boincer umatlas      7745 Feb 25 07:42 heartbeat.json
[2025-02-25 07:42:28] -rw------- 1 boincer umatlas      4215 Feb 25 07:42 pilotlog.txt
[2025-02-25 07:42:28] -rw-r--r-- 1 boincer umatlas        27 Feb 25 07:42 wrapper_checkpoint.txt
[2025-02-25 07:42:28] -rw------- 1 boincer umatlas    655885 Feb 25 07:42 log.43401121._000500.job.log.1
[2025-02-25 07:42:28] -rw-r--r-- 1 boincer umatlas      8192 Feb 25 07:42 boinc_mmap_file
[2025-02-25 07:42:28] -rw------- 1 boincer umatlas       357 Feb 25 07:42 output.list
[2025-02-25 07:42:28] -rw-r--r-- 1 boincer umatlas       620 Feb 25 07:42 runtime_log
[2025-02-25 07:42:28] -rw------- 1 boincer umatlas   1013760 Feb 25 07:42 result.tar.gz
[2025-02-25 07:42:28] -rw-r--r-- 1 boincer umatlas     11418 Feb 25 07:42 runtime_log.err
[2025-02-25 07:42:28] -rw------- 1 boincer umatlas       658 Feb 25 07:42 jLQLDmEd766nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmUDwKDmodyHfm.diag
[2025-02-25 07:42:28] -rw-r--r-- 1 boincer umatlas     21507 Feb 25 07:42 stderr.txt
[2025-02-25 07:42:28] HITS file was successfully produced:
[2025-02-25 07:42:28] -rw------- 1 boincer umatlas 188626344 Feb 25 07:41 shared/HITS.pool.root.1
[2025-02-25 07:42:28]  *** Contents of shared directory: ***
[2025-02-25 07:42:28] total 434548
[2025-02-25 07:42:28] -rw-r--r-- 2 boincer umatlas 254796724 Feb 25 05:47 ATLAS.root_0
[2025-02-25 07:42:28] -rw-r--r-- 2 boincer umatlas    503543 Feb 25 05:47 input.tar.gz
[2025-02-25 07:42:28] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 05:47 start_atlas.sh
[2025-02-25 07:42:28] -rw------- 1 boincer umatlas 188626344 Feb 25 07:41 HITS.pool.root.1
[2025-02-25 07:42:28] -rw------- 1 boincer umatlas   1013760 Feb 25 07:42 result.tar.gz
07:42:30 (329225): run_atlas exited; CPU time 43003.953082
07:42:30 (329225): called boinc_finish(0)

</stderr_txt>
]]>

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