Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:31:38 (3476084): wrapper (7.7.26015): starting
10:31:38 (3476084): wrapper: running run_atlas (--nthreads 8)
[2025-02-25 10:31:38] Arguments: --nthreads 8
[2025-02-25 10:31:38] Threads: 8
[2025-02-25 10:31:38] Checking for CVMFS
[2025-02-25 10:31:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 10:31:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 10:31:38] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 10:31:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 10:31:38] 2.11.5.0 3541397 6985 315644 143043 3 65 28421483 37641216 19357 130560 0 2358694 99.472 9344629 35789 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-02-25 10:31:38] CVMFS is ok
[2025-02-25 10:31:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 10:31:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 10:31:38] Further information can be found at the LHC@home message board.
[2025-02-25 10:31:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 10:31:38] Checking for apptainer binary...
[2025-02-25 10:31:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 10:31:38] Running /usr/bin/apptainer --version
[2025-02-25 10:31:38] apptainer version 1.3.6-1.el9
[2025-02-25 10:31:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 10:31:39] c6-8-25-1.aglt2.org
[2025-02-25 10:31:39] apptainer works
[2025-02-25 10:31:39] Set ATHENA_PROC_NUMBER=8
[2025-02-25 10:31:39] Set ATHENA_CORE_NUMBER=8
[2025-02-25 10:31:39] Starting ATLAS job with PandaID=6530099567
[2025-02-25 10:31:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 11:50:45]  *** The last 200 lines of the pilot log: ***
[2025-02-25 11:50:45]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-02-25 11:50:45]  is_altstaged=None
[2025-02-25 11:50:45]  is_tar=False
[2025-02-25 11:50:45]  lfn=log.43401121._000712.job.log.tgz.1
[2025-02-25 11:50:45]  mtime=0
[2025-02-25 11:50:45]  protocol_id=None
[2025-02-25 11:50:45]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-25 11:50:45]  replicas=None
[2025-02-25 11:50:45]  scope=mc23_13p6TeV
[2025-02-25 11:50:45]  status=None
[2025-02-25 11:50:45]  status_code=0
[2025-02-25 11:50:45]  storage_token=
[2025-02-25 11:50:45]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6530099567/log.43401121._000712.job.log.tgz.1
[2025-02-25 11:50:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6f/7a/log.43401121._000712.job.log.tgz.1
[2025-02-25 11:50:45]  workdir=None
[2025-02-25 11:50:45] ]
[2025-02-25 11:50:45] 2025-02-25 16:50:20,801 | INFO     | transferring file log.43401121._000712.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6530099567/log.43401121._000712.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-02-25 11:50:45] 2025-02-25 16:50:20,801 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6530099567/log.43401121._000712.job.log.tgz.1 /tmp/boinchome/slots/0/log.43401121._000712.job
[2025-02-25 11:50:45] 2025-02-25 16:50:20,823 | INFO     | adding to output.list: log.43401121._000712.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6f/7a/log.43401121._000712.job.log.tg
[2025-02-25 11:50:45] 2025-02-25 16:50:20,824 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-25 11:50:45] 2025-02-25 16:50:20,824 | INFO     | summary of transferred files:
[2025-02-25 11:50:45] 2025-02-25 16:50:20,824 | INFO     |  -- lfn=log.43401121._000712.job.log.tgz.1, status_code=0, status=transferred
[2025-02-25 11:50:45] 2025-02-25 16:50:20,824 | INFO     | stage-out finished correctly
[2025-02-25 11:50:45] 2025-02-25 16:50:21,485 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-25 11:50:45] 2025-02-25 16:50:21,590 | WARNING  | process 3488783 can no longer be monitored (due to stat problems) - aborting
[2025-02-25 11:50:45] 2025-02-25 16:50:21,590 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6530099567/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 11:50:45] 2025-02-25 16:50:21,613 | INFO     | job 6530099567 has state=finished
[2025-02-25 11:50:45] 2025-02-25 16:50:21,614 | INFO     | preparing for final server update for job 6530099567 in state='finished'
[2025-02-25 11:50:45] 2025-02-25 16:50:21,615 | INFO     | this job has now completed (state=finished)
[2025-02-25 11:50:45] 2025-02-25 16:50:21,615 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-25 11:50:45] 2025-02-25 16:50:21,616 | INFO     | log transfer has been attempted: DONE
[2025-02-25 11:50:45] 2025-02-25 16:50:21,616 | INFO     | job 6530099567 has finished - writing final server update
[2025-02-25 11:50:45] 2025-02-25 16:50:21,616 | INFO     | total number of processed events: 400 (read)
[2025-02-25 11:50:45] 2025-02-25 16:50:21,635 | INFO     | executing command: lscpu
[2025-02-25 11:50:45] 2025-02-25 16:50:21,684 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2025-02-25 11:50:45] 2025-02-25 16:50:21,720 | INFO     | number of running child processes to parent process 3488783: 1
[2025-02-25 11:50:45] 2025-02-25 16:50:21,721 | INFO     | maximum number of monitored processes: 6
[2025-02-25 11:50:45] 2025-02-25 16:50:21,737 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-25 11:50:45] 2025-02-25 16:50:24,223 | INFO     | monitor loop #355: job 0:6530099567 is in state 'finished'
[2025-02-25 11:50:45] 2025-02-25 16:50:24,224 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 11:50:45] 2025-02-25 16:50:25,154 | INFO     | CPU arch script returned: x86-64-v4
[2025-02-25 11:50:45] 2025-02-25 16:50:25,155 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6530099567/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 11:50:45] 2025-02-25 16:50:25,156 | INFO     | extracted standard info from prmon json
[2025-02-25 11:50:45] 2025-02-25 16:50:25,156 | INFO     | extracted standard memory fields from prmon json
[2025-02-25 11:50:45] 2025-02-25 16:50:25,156 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-25 11:50:45] 2025-02-25 16:50:25,157 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 11:50:45] 2025-02-25 16:50:25,157 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 11:50:45] 2025-02-25 16:50:25,160 | INFO     | fitting pss+swap vs Time
[2025-02-25 11:50:45] 2025-02-25 16:50:25,161 | INFO     | model: linear, x: [1740497838.0, 1740497899.0, 1740497960.0, 1740498021.0, 1740498082.0, 1740498143.0, 1740498204.0, 1740498265.0, 1740498326.0, 1740498387.0, 1740
[2025-02-25 11:50:45] 2025-02-25 16:50:25,161 | INFO     | sum of square deviations: 106336877.5
[2025-02-25 11:50:45] 2025-02-25 16:50:25,161 | INFO     | sum of deviations: 6320228452.5
[2025-02-25 11:50:45] 2025-02-25 16:50:25,161 | INFO     | mean x: 1740499942.5
[2025-02-25 11:50:45] 2025-02-25 16:50:25,162 | INFO     | mean y: 2278438.185714286
[2025-02-25 11:50:45] 2025-02-25 16:50:25,162 | INFO     | -- intersect: -103445909215.8397
[2025-02-25 11:50:45] 2025-02-25 16:50:25,162 | INFO     | intersect: -103445909215.8397
[2025-02-25 11:50:45] 2025-02-25 16:50:25,162 | INFO     | chi2: 1.8730627877118151
[2025-02-25 11:50:45] 2025-02-25 16:50:25,162 | INFO     | -- intersect: -103445909215.8397
[2025-02-25 11:50:45] 2025-02-25 16:50:25,163 | INFO     | current memory leak: 59.44 B/s (using 70 data points, chi2=1.87)
[2025-02-25 11:50:45] 2025-02-25 16:50:25,163 | INFO     | ..............................
[2025-02-25 11:50:45] 2025-02-25 16:50:25,163 | INFO     | . Timing measurements:
[2025-02-25 11:50:45] 2025-02-25 16:50:25,164 | INFO     | . get job = 0 s
[2025-02-25 11:50:45] 2025-02-25 16:50:25,164 | INFO     | . initial setup = 2 s
[2025-02-25 11:50:45] 2025-02-25 16:50:25,164 | INFO     | . payload setup = 5 s
[2025-02-25 11:50:45] 2025-02-25 16:50:25,164 | INFO     | . stage-in = 0 s
[2025-02-25 11:50:45] 2025-02-25 16:50:25,164 | INFO     | . payload execution = 4687 s
[2025-02-25 11:50:45] 2025-02-25 16:50:25,164 | INFO     | . stage-out = 0 s
[2025-02-25 11:50:45] 2025-02-25 16:50:25,164 | INFO     | . log creation = 0 s
[2025-02-25 11:50:45] 2025-02-25 16:50:25,164 | INFO     | ..............................
[2025-02-25 11:50:45] 2025-02-25 16:50:25,349 | INFO     | 
[2025-02-25 11:50:45] 2025-02-25 16:50:25,350 | INFO     | job summary report
[2025-02-25 11:50:45] 2025-02-25 16:50:25,350 | INFO     | --------------------------------------------------
[2025-02-25 11:50:45] 2025-02-25 16:50:25,350 | INFO     | PanDA job id: 6530099567
[2025-02-25 11:50:45] 2025-02-25 16:50:25,350 | INFO     | task id: 43401121
[2025-02-25 11:50:45] 2025-02-25 16:50:25,350 | INFO     | errors: (none)
[2025-02-25 11:50:45] 2025-02-25 16:50:25,350 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 11:50:45] 2025-02-25 16:50:25,350 | INFO     | pilot state: finished 
[2025-02-25 11:50:45] 2025-02-25 16:50:25,350 | INFO     | transexitcode: 0
[2025-02-25 11:50:45] 2025-02-25 16:50:25,350 | INFO     | exeerrorcode: 0
[2025-02-25 11:50:45] 2025-02-25 16:50:25,350 | INFO     | exeerrordiag: 
[2025-02-25 11:50:45] 2025-02-25 16:50:25,350 | INFO     | exitcode: 0
[2025-02-25 11:50:45] 2025-02-25 16:50:25,350 | INFO     | exitmsg: OK
[2025-02-25 11:50:45] 2025-02-25 16:50:25,350 | INFO     | cpuconsumptiontime: 29935 s
[2025-02-25 11:50:45] 2025-02-25 16:50:25,351 | INFO     | nevents: 400
[2025-02-25 11:50:45] 2025-02-25 16:50:25,351 | INFO     | neventsw: 0
[2025-02-25 11:50:45] 2025-02-25 16:50:25,351 | INFO     | pid: 3488783
[2025-02-25 11:50:45] 2025-02-25 16:50:25,351 | INFO     | pgrp: 3488783
[2025-02-25 11:50:45] 2025-02-25 16:50:25,351 | INFO     | corecount: 8
[2025-02-25 11:50:45] 2025-02-25 16:50:25,351 | INFO     | event service: False
[2025-02-25 11:50:45] 2025-02-25 16:50:25,351 | INFO     | sizes: {0: 2376946, 4: 2377152, 11: 2377180, 4696: 2403318, 4697: 2412259, 4698: 2412315, 4702: 2412613}
[2025-02-25 11:50:45] 2025-02-25 16:50:25,351 | INFO     | --------------------------------------------------
[2025-02-25 11:50:45] 2025-02-25 16:50:25,351 | INFO     | 
[2025-02-25 11:50:45] 2025-02-25 16:50:25,351 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-25 11:50:45] 2025-02-25 16:50:25,370 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 11:50:45] 2025-02-25 16:50:25,371 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 11:50:45] 2025-02-25 16:50:25,371 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 11:50:45] 2025-02-25 16:50:25,371 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 11:50:45] 2025-02-25 16:50:25,371 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 11:50:45] 2025-02-25 16:50:25,371 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 11:50:45] 2025-02-25 16:50:25,371 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 11:50:45] 2025-02-25 16:50:25,371 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 11:50:45] 2025-02-25 16:50:25,371 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 11:50:45] 2025-02-25 16:50:25,371 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 11:50:45] 2025-02-25 16:50:25,371 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 11:50:45] 2025-02-25 16:50:25,371 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 11:50:45] 2025-02-25 16:50:25,371 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 11:50:45] 2025-02-25 16:50:25,371 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 11:50:45] 2025-02-25 16:50:25,371 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 11:50:45] 2025-02-25 16:50:25,371 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 11:50:45] 2025-02-25 16:50:25,371 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 11:50:45] 2025-02-25 16:50:25,371 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 11:50:45] 2025-02-25 16:50:25,371 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 11:50:45] 2025-02-25 16:50:25,371 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 11:50:45] 2025-02-25 16:50:25,372 | INFO     | job 6530099567 has completed (purged errors)
[2025-02-25 11:50:45] 2025-02-25 16:50:25,372 | INFO     | overall cleanup function is called
[2025-02-25 11:50:45] 2025-02-25 16:50:26,378 | INFO     | --- collectZombieJob: --- 10, [3488783]
[2025-02-25 11:50:45] 2025-02-25 16:50:26,379 | INFO     | zombie collector waiting for pid 3488783
[2025-02-25 11:50:45] 2025-02-25 16:50:26,379 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 11:50:45] 2025-02-25 16:50:26,379 | INFO     | collected zombie processes
[2025-02-25 11:50:45] 2025-02-25 16:50:26,379 | INFO     | will attempt to kill all subprocesses of pid=3488783
[2025-02-25 11:50:45] 2025-02-25 16:50:26,522 | INFO     | process IDs to be killed: [3488783] (in reverse order)
[2025-02-25 11:50:45] 2025-02-25 16:50:26,620 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 11:50:45] 2025-02-25 16:50:26,620 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 11:50:45] 2025-02-25 16:50:26,637 | INFO     | did not find any defunct processes belonging to 3488783
[2025-02-25 11:50:45] 2025-02-25 16:50:26,653 | INFO     | did not find any defunct processes belonging to 3488783
[2025-02-25 11:50:45] 2025-02-25 16:50:26,654 | INFO     | ready for new job
[2025-02-25 11:50:45] 2025-02-25 16:50:26,654 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 11:50:45] 2025-02-25 16:50:26,656 | INFO     | **************************************
[2025-02-25 11:50:45] 2025-02-25 16:50:26,656 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 11:50:45] 2025-02-25 16:50:26,656 | INFO     | **************************************
[2025-02-25 11:50:45] 2025-02-25 16:50:26,656 | INFO     | 
[2025-02-25 11:50:45] 2025-02-25 16:50:26,673 | INFO     | architecture information:
[2025-02-25 11:50:45] 2025-02-25 16:50:26,674 | INFO     | executing command: cat /etc/os-release
[2025-02-25 11:50:45] 2025-02-25 16:50:26,691 | INFO     | cat /etc/os-release:
[2025-02-25 11:50:45] NAME="CentOS Linux"
[2025-02-25 11:50:45] VERSION="7 (Core)"
[2025-02-25 11:50:45] ID="centos"
[2025-02-25 11:50:45] ID_LIKE="rhel fedora"
[2025-02-25 11:50:45] VERSION_ID="7"
[2025-02-25 11:50:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 11:50:45] ANSI_COLOR="0;31"
[2025-02-25 11:50:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 11:50:45] HOME_URL="https://www.centos.org/"
[2025-02-25 11:50:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 11:50:45] 
[2025-02-25 11:50:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 11:50:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 11:50:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 11:50:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 11:50:45] 
[2025-02-25 11:50:45] 2025-02-25 16:50:26,691 | INFO     | **************************************
[2025-02-25 11:50:45] 2025-02-25 16:50:27,194 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-25 11:50:45] 2025-02-25 16:50:27,210 | INFO     | sufficient remaining disk space (67654123520 B)
[2025-02-25 11:50:45] 2025-02-25 16:50:27,210 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 11:50:45] 2025-02-25 16:50:27,210 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 11:50:45] 2025-02-25 16:50:27,211 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-25 11:50:45] 2025-02-25 16:50:27,211 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 11:50:45] 2025-02-25 16:50:27,211 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 11:50:45] 2025-02-25 16:50:27,212 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 11:50:45] 2025-02-25 16:50:27,212 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 11:50:45] 2025-02-25 16:50:27,212 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 11:50:45] 2025-02-25 16:50:27,442 | INFO     | all job control threads have been joined
[2025-02-25 11:50:45] 2025-02-25 16:50:27,591 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 11:50:45] 2025-02-25 16:50:27,655 | INFO     | all data control threads have been joined
[2025-02-25 11:50:45] 2025-02-25 16:50:27,731 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 11:50:45] 2025-02-25 16:50:27,732 | INFO     | aborting loop
[2025-02-25 11:50:45] 2025-02-25 16:50:28,215 | INFO     | [job] retrieve thread has finished
[2025-02-25 11:50:45] 2025-02-25 16:50:28,216 | INFO     | [job] queue monitor thread has finished
[2025-02-25 11:50:45] 2025-02-25 16:50:28,305 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 11:50:45] 2025-02-25 16:50:28,372 | INFO     | all payload control threads have been joined
[2025-02-25 11:50:45] 2025-02-25 16:50:28,435 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 11:50:45] 2025-02-25 16:50:28,447 | INFO     | [job] control thread has finished
[2025-02-25 11:50:45] 2025-02-25 16:50:28,659 | INFO     | [data] control thread has finished
[2025-02-25 11:50:45] 2025-02-25 16:50:28,737 | INFO     | [job] job monitor thread has finished
[2025-02-25 11:50:45] 2025-02-25 16:50:28,953 | INFO     | [payload] validate_post thread has finished
[2025-02-25 11:50:45] 2025-02-25 16:50:29,045 | INFO     | [data] copytool_in thread has finished
[2025-02-25 11:50:45] 2025-02-25 16:50:29,175 | INFO     | [payload] failed_post thread has finished
[2025-02-25 11:50:45] 2025-02-25 16:50:29,217 | INFO     | [data] copytool_out thread has finished
[2025-02-25 11:50:45] 2025-02-25 16:50:29,377 | INFO     | [payload] control thread has finished
[2025-02-25 11:50:45] 2025-02-25 16:50:29,516 | INFO     | [job] validate thread has finished
[2025-02-25 11:50:45] 2025-02-25 16:50:29,692 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 11:50:45] 2025-02-25 16:50:31,596 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 11:50:45] 2025-02-25 16:50:37,399 | INFO     | job.realtimelogging is not enabled
[2025-02-25 11:50:45] 2025-02-25 16:50:38,404 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 11:50:45] 2025-02-25 16:50:39,794 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140671204075328)>', '<ExcThread(monitor, started 140670580815616)>']
[2025-02-25 11:50:45] 2025-02-25 16:50:40,275 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 11:50:45] 2025-02-25 16:50:40,276 | INFO     | [monitor] control thread has ended
[2025-02-25 11:50:45] 2025-02-25 16:50:44,818 | INFO     | all workflow threads have been joined
[2025-02-25 11:50:45] 2025-02-25 16:50:44,819 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 11:50:45] 2025-02-25 16:50:44,819 | INFO     | traces error code: 0
[2025-02-25 11:50:45] 2025-02-25 16:50:44,819 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 11:50:45] 2025-02-25 16:50:44,997 [wrapper] ==== pilot stdout END ====
[2025-02-25 11:50:45] 2025-02-25 16:50:44,999 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 11:50:45] 2025-02-25 16:50:45,001 [wrapper] pilotpid: 3480172
[2025-02-25 11:50:45] 2025-02-25 16:50:45,002 [wrapper] Pilot exit status: 0
[2025-02-25 11:50:45] 2025-02-25 16:50:45,011 [wrapper] pandaids: 6530099567
[2025-02-25 11:50:45] 2025-02-25 16:50:45,065 [wrapper] cleanup supervisor_pilot   10598 3480173
[2025-02-25 11:50:45] 2025-02-25 16:50:45,068 [wrapper] Test setup, not cleaning
[2025-02-25 11:50:45] 2025-02-25 16:50:45,073 [wrapper] apfmon messages muted
[2025-02-25 11:50:45] 2025-02-25 16:50:45,076 [wrapper] ==== wrapper stdout END ====
[2025-02-25 11:50:45] 2025-02-25 16:50:45,079 [wrapper] ==== wrapper stderr END ====
[2025-02-25 11:50:45]  *** Error codes and diagnostics ***
[2025-02-25 11:50:45]     "exeErrorCode": 0,
[2025-02-25 11:50:45]     "exeErrorDiag": "",
[2025-02-25 11:50:45]     "pilotErrorCode": 0,
[2025-02-25 11:50:45]     "pilotErrorDiag": "",
[2025-02-25 11:50:45]  *** Listing of results directory ***
[2025-02-25 11:50:45] total 428364
[2025-02-25 11:50:45] -rw-r--r--. 1 boincer umatlas    491065 Feb 25 05:12 pilot3.tar.gz
[2025-02-25 11:50:45] -rwx------. 1 boincer umatlas     35865 Feb 25 05:45 runpilot2-wrapper.sh
[2025-02-25 11:50:45] -rw-r--r--. 1 boincer umatlas      5118 Feb 25 05:45 queuedata.json
[2025-02-25 11:50:45] -rw-r--r--. 1 boincer umatlas       100 Feb 25 10:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 11:50:45] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 25 10:31 run_atlas
[2025-02-25 11:50:45] -rw-r--r--. 1 boincer umatlas       105 Feb 25 10:31 job.xml
[2025-02-25 11:50:45] -rw-r--r--. 2 boincer umatlas 250241207 Feb 25 10:31 EVNT.43401119._000031.pool.root.1
[2025-02-25 11:50:45] -rw-r--r--. 2 boincer umatlas     17569 Feb 25 10:31 start_atlas.sh
[2025-02-25 11:50:45] drwxrwx--x. 2 boincer umatlas      4096 Feb 25 10:31 shared
[2025-02-25 11:50:45] -rw-r--r--. 2 boincer umatlas    503546 Feb 25 10:31 input.tar.gz
[2025-02-25 11:50:45] -rw-r--r--. 1 boincer umatlas         0 Feb 25 10:31 boinc_lockfile
[2025-02-25 11:50:45] -rw-r--r--. 1 boincer umatlas      2546 Feb 25 10:31 pandaJob.out
[2025-02-25 11:50:45] -rw-------. 1 boincer umatlas       467 Feb 25 10:31 setup.sh.local
[2025-02-25 11:50:45] -rw-------. 1 boincer umatlas    988282 Feb 25 10:31 agis_schedconf.cvmfs.json
[2025-02-25 11:50:45] -rw-------. 1 boincer umatlas   1577983 Feb 25 10:31 agis_ddmendpoints.agis.ALL.json
[2025-02-25 11:50:45] drwx------. 4 boincer umatlas      4096 Feb 25 10:31 pilot3
[2025-02-25 11:50:45] -rw-r--r--. 1 boincer umatlas      6855 Feb 25 11:46 init_data.xml
[2025-02-25 11:50:45] -rw-------. 1 boincer umatlas 183056815 Feb 25 11:49 HITS.43401121._000712.pool.root.1
[2025-02-25 11:50:45] -rw-r--r--. 1 boincer umatlas       529 Feb 25 11:49 boinc_task_state.xml
[2025-02-25 11:50:45] -rw-------. 1 boincer umatlas      1055 Feb 25 11:50 memory_monitor_summary.json
[2025-02-25 11:50:45] -rw-------. 1 boincer umatlas    305119 Feb 25 11:50 log.43401121._000712.job.log.tgz.1
[2025-02-25 11:50:45] -rw-------. 1 boincer umatlas        95 Feb 25 11:50 pilot_heartbeat.json
[2025-02-25 11:50:45] -rw-------. 1 boincer umatlas      7736 Feb 25 11:50 heartbeat.json
[2025-02-25 11:50:45] -rw-r--r--. 1 boincer umatlas        27 Feb 25 11:50 wrapper_checkpoint.txt
[2025-02-25 11:50:45] -rw-r--r--. 1 boincer umatlas      8192 Feb 25 11:50 boinc_mmap_file
[2025-02-25 11:50:45] -rw-------. 1 boincer umatlas      4410 Feb 25 11:50 pilotlog.txt
[2025-02-25 11:50:45] -rw-------. 1 boincer umatlas    468794 Feb 25 11:50 log.43401121._000712.job.log.1
[2025-02-25 11:50:45] -rw-------. 1 boincer umatlas       357 Feb 25 11:50 output.list
[2025-02-25 11:50:45] -rw-r--r--. 1 boincer umatlas       620 Feb 25 11:50 runtime_log
[2025-02-25 11:50:45] -rw-------. 1 boincer umatlas    788480 Feb 25 11:50 result.tar.gz
[2025-02-25 11:50:45] -rw-r--r--. 1 boincer umatlas     11423 Feb 25 11:50 runtime_log.err
[2025-02-25 11:50:45] -rw-------. 1 boincer umatlas       651 Feb 25 11:50 bzRMDmCc766n9Rq4apOajLDm4fhM0noT9bVoFjIUDmwMfKDm8A9z0n.diag
[2025-02-25 11:50:45] -rw-r--r--. 1 boincer umatlas     21509 Feb 25 11:50 stderr.txt
[2025-02-25 11:50:45] HITS file was successfully produced:
[2025-02-25 11:50:45] -rw-------. 1 boincer umatlas 183056815 Feb 25 11:49 shared/HITS.pool.root.1
[2025-02-25 11:50:45]  *** Contents of shared directory: ***
[2025-02-25 11:50:45] total 424436
[2025-02-25 11:50:45] -rw-r--r--. 2 boincer umatlas 250241207 Feb 25 10:31 ATLAS.root_0
[2025-02-25 11:50:45] -rw-r--r--. 2 boincer umatlas     17569 Feb 25 10:31 start_atlas.sh
[2025-02-25 11:50:45] -rw-r--r--. 2 boincer umatlas    503546 Feb 25 10:31 input.tar.gz
[2025-02-25 11:50:45] -rw-------. 1 boincer umatlas 183056815 Feb 25 11:49 HITS.pool.root.1
[2025-02-25 11:50:45] -rw-------. 1 boincer umatlas    788480 Feb 25 11:50 result.tar.gz
11:50:46 (3476084): run_atlas exited; CPU time 29942.674180
11:50:46 (3476084): called boinc_finish(0)

</stderr_txt>
]]>

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