Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:20:21 (26657): wrapper (7.7.26015): starting
05:20:21 (26657): wrapper: running run_atlas (--nthreads 12)
[2025-02-25 05:20:21] Arguments: --nthreads 12
[2025-02-25 05:20:21] Threads: 12
[2025-02-25 05:20:21] Checking for CVMFS
[2025-02-25 05:20:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 05:20:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 05:20:21] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 05:20:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 05:20:21] 2.11.2.0 3124 6675 119688 143035 3 1 8159075 20275201 1 130560 0 4818118 99.780 2268152 26366 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-25 05:20:21] CVMFS is ok
[2025-02-25 05:20:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 05:20:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 05:20:21] Further information can be found at the LHC@home message board.
[2025-02-25 05:20:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 05:20:21] Checking for apptainer binary...
[2025-02-25 05:20:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 05:20:21] Running /usr/bin/apptainer --version
[2025-02-25 05:20:21] apptainer version 1.3.2-1.el7
[2025-02-25 05:20:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 05:20:23] c-205-29.aglt2.org
[2025-02-25 05:20:23] apptainer works
[2025-02-25 05:20:23] Set ATHENA_PROC_NUMBER=12
[2025-02-25 05:20:23] Set ATHENA_CORE_NUMBER=12
[2025-02-25 05:20:23] Starting ATLAS job with PandaID=6530067182
[2025-02-25 05:20:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 06:41:00]  *** The last 200 lines of the pilot log: ***
[2025-02-25 06:41:00]  guid=4ebcdda5-47cd-4219-a0ea-7b91ccf213f4
[2025-02-25 06:41:00]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-02-25 06:41:00]  is_altstaged=None
[2025-02-25 06:41:00]  is_tar=False
[2025-02-25 06:41:00]  lfn=log.43401137._000164.job.log.tgz.1
[2025-02-25 06:41:00]  mtime=0
[2025-02-25 06:41:00]  protocol_id=None
[2025-02-25 06:41:00]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-25 06:41:00]  replicas=None
[2025-02-25 06:41:00]  scope=mc23_13p6TeV
[2025-02-25 06:41:00]  status=None
[2025-02-25 06:41:00]  status_code=0
[2025-02-25 06:41:00]  storage_token=
[2025-02-25 06:41:00]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6530067182/log.43401137._000164.job.log.tgz.1
[2025-02-25 06:41:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/22/e4/log.43401137._000164.job.log.tgz.1
[2025-02-25 06:41:00]  workdir=None
[2025-02-25 06:41:00] ]
[2025-02-25 06:41:00] 2025-02-25 11:40:33,129 | INFO     | transferring file log.43401137._000164.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6530067182/log.43401137._000164.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-02-25 06:41:00] 2025-02-25 11:40:33,130 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6530067182/log.43401137._000164.job.log.tgz.1 /tmp/boinchome/slots/0/log.43401137._000164.job
[2025-02-25 06:41:00] 2025-02-25 11:40:33,153 | INFO     | adding to output.list: log.43401137._000164.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/22/e4/log.43401137._000164.job.log.tg
[2025-02-25 06:41:00] 2025-02-25 11:40:33,154 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-25 06:41:00] 2025-02-25 11:40:33,154 | INFO     | summary of transferred files:
[2025-02-25 06:41:00] 2025-02-25 11:40:33,154 | INFO     |  -- lfn=log.43401137._000164.job.log.tgz.1, status_code=0, status=transferred
[2025-02-25 06:41:00] 2025-02-25 11:40:33,155 | INFO     | stage-out finished correctly
[2025-02-25 06:41:00] 2025-02-25 11:40:34,820 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-25 06:41:00] 2025-02-25 11:40:34,903 | INFO     | job 6530067182 has state=finished
[2025-02-25 06:41:00] 2025-02-25 11:40:34,903 | INFO     | preparing for final server update for job 6530067182 in state='finished'
[2025-02-25 06:41:00] 2025-02-25 11:40:34,975 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-02-25 06:41:00] 2025-02-25 11:40:34,976 | INFO     | this job has now completed (state=finished)
[2025-02-25 06:41:00] 2025-02-25 11:40:34,976 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-25 06:41:00] 2025-02-25 11:40:34,976 | INFO     | log transfer has been attempted: DONE
[2025-02-25 06:41:00] 2025-02-25 11:40:34,976 | INFO     | job 6530067182 has finished - writing final server update
[2025-02-25 06:41:00] 2025-02-25 11:40:34,976 | INFO     | total number of processed events: 400 (read)
[2025-02-25 06:41:00] 2025-02-25 11:40:34,978 | INFO     | executing command: lscpu
[2025-02-25 06:41:00] 2025-02-25 11:40:35,003 | INFO     | found 12 cores (6 cores per socket, 2 sockets)
[2025-02-25 06:41:00] 2025-02-25 11:40:35,024 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-25 06:41:00] 2025-02-25 11:40:39,908 | INFO     | CPU arch script returned: x86-64-v2
[2025-02-25 06:41:00] 2025-02-25 11:40:39,909 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6530067182/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 06:41:00] 2025-02-25 11:40:39,910 | INFO     | extracted standard info from prmon json
[2025-02-25 06:41:00] 2025-02-25 11:40:39,910 | INFO     | extracted standard memory fields from prmon json
[2025-02-25 06:41:00] 2025-02-25 11:40:39,911 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-25 06:41:00] 2025-02-25 11:40:39,911 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 06:41:00] 2025-02-25 11:40:39,911 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 06:41:00] 2025-02-25 11:40:39,914 | INFO     | fitting pss+swap vs Time
[2025-02-25 06:41:00] 2025-02-25 11:40:39,914 | INFO     | model: linear, x: [1740479177.0, 1740479238.0, 1740479299.0, 1740479360.0, 1740479421.0, 1740479482.0, 1740479543.0, 1740479604.0, 1740479665.0, 1740479726.0, 1740
[2025-02-25 06:41:00] 2025-02-25 11:40:39,914 | INFO     | sum of square deviations: 115715658.0
[2025-02-25 06:41:00] 2025-02-25 11:40:39,915 | INFO     | sum of deviations: 18241613148.5
[2025-02-25 06:41:00] 2025-02-25 11:40:39,919 | INFO     | mean x: 1740481342.5
[2025-02-25 06:41:00] 2025-02-25 11:40:39,919 | INFO     | mean y: 2697050.2083333335
[2025-02-25 06:41:00] 2025-02-25 11:40:39,919 | INFO     | -- intersect: -274369742175.49203
[2025-02-25 06:41:00] 2025-02-25 11:40:39,920 | INFO     | intersect: -274369742175.49203
[2025-02-25 06:41:00] 2025-02-25 11:40:39,920 | INFO     | chi2: 2.4003371878008415
[2025-02-25 06:41:00] 2025-02-25 11:40:39,920 | INFO     | -- intersect: -274369742175.49203
[2025-02-25 06:41:00] 2025-02-25 11:40:39,920 | INFO     | current memory leak: 157.64 B/s (using 72 data points, chi2=2.40)
[2025-02-25 06:41:00] 2025-02-25 11:40:39,921 | INFO     | ..............................
[2025-02-25 06:41:00] 2025-02-25 11:40:39,922 | INFO     | . Timing measurements:
[2025-02-25 06:41:00] 2025-02-25 11:40:39,922 | INFO     | . get job = 0 s
[2025-02-25 06:41:00] 2025-02-25 11:40:39,922 | INFO     | . initial setup = 2 s
[2025-02-25 06:41:00] 2025-02-25 11:40:39,922 | INFO     | . payload setup = 9 s
[2025-02-25 06:41:00] 2025-02-25 11:40:39,922 | INFO     | . stage-in = 0 s
[2025-02-25 06:41:00] 2025-02-25 11:40:39,922 | INFO     | . payload execution = 4765 s
[2025-02-25 06:41:00] 2025-02-25 11:40:39,922 | INFO     | . stage-out = 0 s
[2025-02-25 06:41:00] 2025-02-25 11:40:39,922 | INFO     | . log creation = 0 s
[2025-02-25 06:41:00] 2025-02-25 11:40:39,922 | INFO     | ..............................
[2025-02-25 06:41:00] 2025-02-25 11:40:39,983 | WARNING  | process 4466 can no longer be monitored (due to stat problems) - aborting
[2025-02-25 06:41:00] 2025-02-25 11:40:39,983 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6530067182/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 06:41:00] 2025-02-25 11:40:40,072 | INFO     | number of running child processes to parent process 4466: 1
[2025-02-25 06:41:00] 2025-02-25 11:40:40,073 | INFO     | maximum number of monitored processes: 6
[2025-02-25 06:41:00] 2025-02-25 11:40:40,073 | INFO     | aborting job monitoring since job object (job id=6530067182) has expired
[2025-02-25 06:41:00] 2025-02-25 11:40:40,189 | INFO     | 
[2025-02-25 06:41:00] 2025-02-25 11:40:40,190 | INFO     | job summary report
[2025-02-25 06:41:00] 2025-02-25 11:40:40,190 | INFO     | --------------------------------------------------
[2025-02-25 06:41:00] 2025-02-25 11:40:40,190 | INFO     | PanDA job id: 6530067182
[2025-02-25 06:41:00] 2025-02-25 11:40:40,190 | INFO     | task id: 43401137
[2025-02-25 06:41:00] 2025-02-25 11:40:40,190 | INFO     | errors: (none)
[2025-02-25 06:41:00] 2025-02-25 11:40:40,190 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 06:41:00] 2025-02-25 11:40:40,191 | INFO     | pilot state: finished 
[2025-02-25 06:41:00] 2025-02-25 11:40:40,191 | INFO     | transexitcode: 0
[2025-02-25 06:41:00] 2025-02-25 11:40:40,191 | INFO     | exeerrorcode: 0
[2025-02-25 06:41:00] 2025-02-25 11:40:40,191 | INFO     | exeerrordiag: 
[2025-02-25 06:41:00] 2025-02-25 11:40:40,191 | INFO     | exitcode: 0
[2025-02-25 06:41:00] 2025-02-25 11:40:40,191 | INFO     | exitmsg: OK
[2025-02-25 06:41:00] 2025-02-25 11:40:40,192 | INFO     | cpuconsumptiontime: 45371 s
[2025-02-25 06:41:00] 2025-02-25 11:40:40,192 | INFO     | nevents: 400
[2025-02-25 06:41:00] 2025-02-25 11:40:40,192 | INFO     | neventsw: 0
[2025-02-25 06:41:00] 2025-02-25 11:40:40,192 | INFO     | pid: 4466
[2025-02-25 06:41:00] 2025-02-25 11:40:40,192 | INFO     | pgrp: 4466
[2025-02-25 06:41:00] 2025-02-25 11:40:40,192 | INFO     | corecount: 12
[2025-02-25 06:41:00] 2025-02-25 11:40:40,192 | INFO     | event service: False
[2025-02-25 06:41:00] 2025-02-25 11:40:40,193 | INFO     | sizes: {0: 2383196, 1: 2383395, 6: 2383601, 11: 2383629, 4775: 2409652, 4777: 2418593, 4779: 2418777, 4784: 2418947}
[2025-02-25 06:41:00] 2025-02-25 11:40:40,193 | INFO     | --------------------------------------------------
[2025-02-25 06:41:00] 2025-02-25 11:40:40,193 | INFO     | 
[2025-02-25 06:41:00] 2025-02-25 11:40:40,193 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-25 06:41:00] 2025-02-25 11:40:40,217 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 06:41:00] 2025-02-25 11:40:40,217 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 06:41:00] 2025-02-25 11:40:40,217 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 06:41:00] 2025-02-25 11:40:40,217 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 06:41:00] 2025-02-25 11:40:40,218 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 06:41:00] 2025-02-25 11:40:40,218 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 06:41:00] 2025-02-25 11:40:40,218 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 06:41:00] 2025-02-25 11:40:40,218 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 06:41:00] 2025-02-25 11:40:40,218 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 06:41:00] 2025-02-25 11:40:40,218 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 06:41:00] 2025-02-25 11:40:40,219 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 06:41:00] 2025-02-25 11:40:40,219 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 06:41:00] 2025-02-25 11:40:40,219 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 06:41:00] 2025-02-25 11:40:40,219 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 06:41:00] 2025-02-25 11:40:40,219 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 06:41:00] 2025-02-25 11:40:40,219 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 06:41:00] 2025-02-25 11:40:40,220 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 06:41:00] 2025-02-25 11:40:40,220 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 06:41:00] 2025-02-25 11:40:40,220 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 06:41:00] 2025-02-25 11:40:40,220 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 06:41:00] 2025-02-25 11:40:40,220 | INFO     | job 6530067182 has completed (purged errors)
[2025-02-25 06:41:00] 2025-02-25 11:40:40,220 | INFO     | overall cleanup function is called
[2025-02-25 06:41:00] 2025-02-25 11:40:41,228 | INFO     | --- collectZombieJob: --- 10, [4466]
[2025-02-25 06:41:00] 2025-02-25 11:40:41,229 | INFO     | zombie collector waiting for pid 4466
[2025-02-25 06:41:00] 2025-02-25 11:40:41,229 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 06:41:00] 2025-02-25 11:40:41,229 | INFO     | collected zombie processes
[2025-02-25 06:41:00] 2025-02-25 11:40:41,229 | INFO     | will attempt to kill all subprocesses of pid=4466
[2025-02-25 06:41:00] 2025-02-25 11:40:41,290 | INFO     | process IDs to be killed: [4466] (in reverse order)
[2025-02-25 06:41:00] 2025-02-25 11:40:41,341 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 06:41:00] 2025-02-25 11:40:41,341 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 06:41:00] 2025-02-25 11:40:41,344 | INFO     | did not find any defunct processes belonging to 4466
[2025-02-25 06:41:00] 2025-02-25 11:40:41,348 | INFO     | did not find any defunct processes belonging to 4466
[2025-02-25 06:41:00] 2025-02-25 11:40:41,348 | INFO     | ready for new job
[2025-02-25 06:41:00] 2025-02-25 11:40:41,348 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 06:41:00] 2025-02-25 11:40:41,350 | INFO     | **************************************
[2025-02-25 06:41:00] 2025-02-25 11:40:41,350 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 06:41:00] 2025-02-25 11:40:41,350 | INFO     | **************************************
[2025-02-25 06:41:00] 2025-02-25 11:40:41,350 | INFO     | 
[2025-02-25 06:41:00] 2025-02-25 11:40:41,351 | INFO     | architecture information:
[2025-02-25 06:41:00] 2025-02-25 11:40:41,351 | INFO     | executing command: cat /etc/os-release
[2025-02-25 06:41:00] 2025-02-25 11:40:41,366 | INFO     | cat /etc/os-release:
[2025-02-25 06:41:00] NAME="CentOS Linux"
[2025-02-25 06:41:00] VERSION="7 (Core)"
[2025-02-25 06:41:00] ID="centos"
[2025-02-25 06:41:00] ID_LIKE="rhel fedora"
[2025-02-25 06:41:00] VERSION_ID="7"
[2025-02-25 06:41:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 06:41:00] ANSI_COLOR="0;31"
[2025-02-25 06:41:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 06:41:00] HOME_URL="https://www.centos.org/"
[2025-02-25 06:41:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 06:41:00] 
[2025-02-25 06:41:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 06:41:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 06:41:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 06:41:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 06:41:00] 
[2025-02-25 06:41:00] 2025-02-25 11:40:41,366 | INFO     | **************************************
[2025-02-25 06:41:00] 2025-02-25 11:40:41,869 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-25 06:41:00] 2025-02-25 11:40:41,886 | INFO     | sufficient remaining disk space (29363273728 B)
[2025-02-25 06:41:00] 2025-02-25 11:40:41,886 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 06:41:00] 2025-02-25 11:40:41,886 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 06:41:00] 2025-02-25 11:40:41,887 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 06:41:00] 2025-02-25 11:40:41,887 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 06:41:00] 2025-02-25 11:40:41,887 | INFO     | aborting loop
[2025-02-25 06:41:00] 2025-02-25 11:40:41,888 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 06:41:00] 2025-02-25 11:40:41,888 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 06:41:00] 2025-02-25 11:40:42,231 | INFO     | all payload control threads have been joined
[2025-02-25 06:41:00] 2025-02-25 11:40:42,618 | INFO     | all data control threads have been joined
[2025-02-25 06:41:00] 2025-02-25 11:40:42,696 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 06:41:00] 2025-02-25 11:40:42,697 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 06:41:00] 2025-02-25 11:40:42,712 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 06:41:00] 2025-02-25 11:40:42,823 | INFO     | all job control threads have been joined
[2025-02-25 06:41:00] 2025-02-25 11:40:42,892 | INFO     | [job] retrieve thread has finished
[2025-02-25 06:41:00] 2025-02-25 11:40:42,892 | INFO     | [job] queue monitor thread has finished
[2025-02-25 06:41:00] 2025-02-25 11:40:42,893 | INFO     | [job] job monitor thread has finished
[2025-02-25 06:41:00] 2025-02-25 11:40:42,944 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 06:41:00] 2025-02-25 11:40:43,234 | INFO     | [payload] control thread has finished
[2025-02-25 06:41:00] 2025-02-25 11:40:43,608 | INFO     | [payload] validate_post thread has finished
[2025-02-25 06:41:00] 2025-02-25 11:40:43,624 | INFO     | [data] control thread has finished
[2025-02-25 06:41:00] 2025-02-25 11:40:43,829 | INFO     | [job] control thread has finished
[2025-02-25 06:41:00] 2025-02-25 11:40:43,893 | INFO     | [data] copytool_out thread has finished
[2025-02-25 06:41:00] 2025-02-25 11:40:43,956 | INFO     | [data] copytool_in thread has finished
[2025-02-25 06:41:00] 2025-02-25 11:40:44,032 | INFO     | [job] validate thread has finished
[2025-02-25 06:41:00] 2025-02-25 11:40:44,294 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 06:41:00] 2025-02-25 11:40:44,323 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 06:41:00] 2025-02-25 11:40:44,399 | INFO     | [payload] failed_post thread has finished
[2025-02-25 06:41:00] 2025-02-25 11:40:45,894 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 06:41:00] 2025-02-25 11:40:52,853 | INFO     | job.realtimelogging is not enabled
[2025-02-25 06:41:00] 2025-02-25 11:40:53,858 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 06:41:00] 2025-02-25 11:40:55,277 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140196626569024)>', '<ExcThread(monitor, started 140196401837824)>']
[2025-02-25 06:41:00] 2025-02-25 11:40:55,779 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 06:41:00] 2025-02-25 11:40:55,779 | INFO     | [monitor] control thread has ended
[2025-02-25 06:41:00] 2025-02-25 11:41:00,302 | INFO     | all workflow threads have been joined
[2025-02-25 06:41:00] 2025-02-25 11:41:00,303 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 06:41:00] 2025-02-25 11:41:00,303 | INFO     | traces error code: 0
[2025-02-25 06:41:00] 2025-02-25 11:41:00,303 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 06:41:00] 2025-02-25 11:41:00,393 [wrapper] ==== pilot stdout END ====
[2025-02-25 06:41:00] 2025-02-25 11:41:00,397 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 06:41:00] 2025-02-25 11:41:00,401 [wrapper] pilotpid: 30328
[2025-02-25 06:41:00] 2025-02-25 11:41:00,405 [wrapper] Pilot exit status: 0
[2025-02-25 06:41:00] 2025-02-25 11:41:00,419 [wrapper] pandaids: 6530067182
[2025-02-25 06:41:00] 2025-02-25 11:41:00,464 [wrapper] cleanup supervisor_pilot 20998 30329
[2025-02-25 06:41:00] 2025-02-25 11:41:00,468 [wrapper] Test setup, not cleaning
[2025-02-25 06:41:00] 2025-02-25 11:41:00,476 [wrapper] apfmon messages muted
[2025-02-25 06:41:00] 2025-02-25 11:41:00,480 [wrapper] ==== wrapper stdout END ====
[2025-02-25 06:41:00] 2025-02-25 11:41:00,484 [wrapper] ==== wrapper stderr END ====
[2025-02-25 06:41:00]  *** Error codes and diagnostics ***
[2025-02-25 06:41:00]     "exeErrorCode": 0,
[2025-02-25 06:41:00]     "exeErrorDiag": "",
[2025-02-25 06:41:00]     "pilotErrorCode": 0,
[2025-02-25 06:41:00]     "pilotErrorDiag": "",
[2025-02-25 06:41:00]  *** Listing of results directory ***
[2025-02-25 06:41:00] total 430036
[2025-02-25 06:41:00] -rw-r--r-- 1 boincer umatlas    491065 Feb 25 05:12 pilot3.tar.gz
[2025-02-25 06:41:00] -rwx------ 1 boincer umatlas     35865 Feb 25 05:18 runpilot2-wrapper.sh
[2025-02-25 06:41:00] -rw-r--r-- 1 boincer umatlas      5118 Feb 25 05:18 queuedata.json
[2025-02-25 06:41:00] -rw-r--r-- 1 boincer umatlas       100 Feb 25 05:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 06:41:00] -rwxr-xr-x 1 boincer umatlas      7986 Feb 25 05:20 run_atlas
[2025-02-25 06:41:00] -rw-r--r-- 1 boincer umatlas       105 Feb 25 05:20 job.xml
[2025-02-25 06:41:00] -rw-r--r-- 2 boincer umatlas 252850724 Feb 25 05:20 EVNT.43401135._000009.pool.root.1
[2025-02-25 06:41:00] drwxrwx--x 2 boincer umatlas      4096 Feb 25 05:20 shared
[2025-02-25 06:41:00] -rw-r--r-- 2 boincer umatlas    503550 Feb 25 05:20 input.tar.gz
[2025-02-25 06:41:00] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 05:20 start_atlas.sh
[2025-02-25 06:41:00] -rw-r--r-- 1 boincer umatlas         0 Feb 25 05:20 boinc_lockfile
[2025-02-25 06:41:00] -rw-r--r-- 1 boincer umatlas      2555 Feb 25 05:20 pandaJob.out
[2025-02-25 06:41:00] -rw------- 1 boincer umatlas       424 Feb 25 05:20 setup.sh.local
[2025-02-25 06:41:00] -rw------- 1 boincer umatlas    988817 Feb 25 05:20 agis_schedconf.cvmfs.json
[2025-02-25 06:41:00] -rw------- 1 boincer umatlas   1582519 Feb 25 05:20 agis_ddmendpoints.agis.ALL.json
[2025-02-25 06:41:00] drwx------ 4 boincer umatlas      4096 Feb 25 05:20 pilot3
[2025-02-25 06:41:00] -rw-r--r-- 1 boincer umatlas      5868 Feb 25 06:39 init_data.xml
[2025-02-25 06:41:00] -rw------- 1 boincer umatlas 182066289 Feb 25 06:40 HITS.43401137._000164.pool.root.1
[2025-02-25 06:41:00] -rw-r--r-- 1 boincer umatlas       529 Feb 25 06:40 boinc_task_state.xml
[2025-02-25 06:41:00] -rw------- 1 boincer umatlas      1043 Feb 25 06:40 memory_monitor_summary.json
[2025-02-25 06:41:00] -rw------- 1 boincer umatlas    366834 Feb 25 06:40 log.43401137._000164.job.log.tgz.1
[2025-02-25 06:41:00] -rw------- 1 boincer umatlas        95 Feb 25 06:40 pilot_heartbeat.json
[2025-02-25 06:41:00] -rw------- 1 boincer umatlas      7755 Feb 25 06:40 heartbeat.json
[2025-02-25 06:41:00] -rw-r--r-- 1 boincer umatlas      8192 Feb 25 06:40 boinc_mmap_file
[2025-02-25 06:41:00] -rw-r--r-- 1 boincer umatlas        27 Feb 25 06:40 wrapper_checkpoint.txt
[2025-02-25 06:41:00] -rw------- 1 boincer umatlas      4287 Feb 25 06:41 pilotlog.txt
[2025-02-25 06:41:00] -rw------- 1 boincer umatlas    450472 Feb 25 06:41 log.43401137._000164.job.log.1
[2025-02-25 06:41:00] -rw------- 1 boincer umatlas       357 Feb 25 06:41 output.list
[2025-02-25 06:41:00] -rw-r--r-- 1 boincer umatlas       620 Feb 25 06:41 runtime_log
[2025-02-25 06:41:00] -rw------- 1 boincer umatlas    839680 Feb 25 06:41 result.tar.gz
[2025-02-25 06:41:00] -rw-r--r-- 1 boincer umatlas     11015 Feb 25 06:41 runtime_log.err
[2025-02-25 06:41:00] -rw------- 1 boincer umatlas       658 Feb 25 06:41 07hMDmIC766n9Rq4apOajLDm4fhM0noT9bVoFjIUDmtJfKDmoOZuGo.diag
[2025-02-25 06:41:00] -rw-r--r-- 1 boincer umatlas     21398 Feb 25 06:41 stderr.txt
[2025-02-25 06:41:00] HITS file was successfully produced:
[2025-02-25 06:41:00] -rw------- 1 boincer umatlas 182066289 Feb 25 06:40 shared/HITS.pool.root.1
[2025-02-25 06:41:00]  *** Contents of shared directory: ***
[2025-02-25 06:41:00] total 426064
[2025-02-25 06:41:00] -rw-r--r-- 2 boincer umatlas 252850724 Feb 25 05:20 ATLAS.root_0
[2025-02-25 06:41:00] -rw-r--r-- 2 boincer umatlas    503550 Feb 25 05:20 input.tar.gz
[2025-02-25 06:41:00] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 05:20 start_atlas.sh
[2025-02-25 06:41:00] -rw------- 1 boincer umatlas 182066289 Feb 25 06:40 HITS.pool.root.1
[2025-02-25 06:41:00] -rw------- 1 boincer umatlas    839680 Feb 25 06:41 result.tar.gz
06:41:01 (26657): run_atlas exited; CPU time 45336.477282
06:41:01 (26657): called boinc_finish(0)

</stderr_txt>
]]>

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