Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:19:30 (19791): wrapper (7.7.26015): starting
05:19:30 (19791): wrapper: running run_atlas (--nthreads 12)
[2025-02-25 05:19:30] Arguments: --nthreads 12
[2025-02-25 05:19:30] Threads: 12
[2025-02-25 05:19:30] Checking for CVMFS
[2025-02-25 05:19:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 05:19:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 05:19:30] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 05:19:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 05:19:30] 2.11.2.0 21529 292867 150428 143035 3 1 19102447 20275200 1 130560 0 23590366 99.986 7613203 41047 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-25 05:19:30] CVMFS is ok
[2025-02-25 05:19:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 05:19:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 05:19:30] Further information can be found at the LHC@home message board.
[2025-02-25 05:19:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 05:19:30] Checking for apptainer binary...
[2025-02-25 05:19:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 05:19:30] Running /usr/bin/apptainer --version
[2025-02-25 05:19:30] apptainer version 1.3.2-1.el7
[2025-02-25 05:19:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 05:19:32] c-205-9.aglt2.org
[2025-02-25 05:19:32] apptainer works
[2025-02-25 05:19:32] Set ATHENA_PROC_NUMBER=12
[2025-02-25 05:19:32] Set ATHENA_CORE_NUMBER=12
[2025-02-25 05:19:32] Starting ATLAS job with PandaID=6530067160
[2025-02-25 05:19:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 06:44:38]  *** The last 200 lines of the pilot log: ***
[2025-02-25 06:44:38]  is_altstaged=None
[2025-02-25 06:44:38]  is_tar=False
[2025-02-25 06:44:38]  lfn=log.43401137._000142.job.log.tgz.1
[2025-02-25 06:44:38]  mtime=0
[2025-02-25 06:44:38]  protocol_id=None
[2025-02-25 06:44:38]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-25 06:44:38]  replicas=None
[2025-02-25 06:44:38]  scope=mc23_13p6TeV
[2025-02-25 06:44:38]  status=None
[2025-02-25 06:44:38]  status_code=0
[2025-02-25 06:44:38]  storage_token=
[2025-02-25 06:44:38]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6530067160/log.43401137._000142.job.log.tgz.1
[2025-02-25 06:44:38]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/dd/0c/log.43401137._000142.job.log.tgz.1
[2025-02-25 06:44:38]  workdir=None
[2025-02-25 06:44:38] ]
[2025-02-25 06:44:38] 2025-02-25 11:44:13,491 | INFO     | transferring file log.43401137._000142.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6530067160/log.43401137._000142.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-02-25 06:44:38] 2025-02-25 11:44:13,491 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6530067160/log.43401137._000142.job.log.tgz.1 /tmp/boinchome/slots/0/log.43401137._000142.job
[2025-02-25 06:44:38] 2025-02-25 11:44:13,515 | INFO     | adding to output.list: log.43401137._000142.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/dd/0c/log.43401137._000142.job.log.tg
[2025-02-25 06:44:38] 2025-02-25 11:44:13,516 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-25 06:44:38] 2025-02-25 11:44:13,516 | INFO     | summary of transferred files:
[2025-02-25 06:44:38] 2025-02-25 11:44:13,516 | INFO     |  -- lfn=log.43401137._000142.job.log.tgz.1, status_code=0, status=transferred
[2025-02-25 06:44:38] 2025-02-25 11:44:13,516 | INFO     | stage-out finished correctly
[2025-02-25 06:44:38] 2025-02-25 11:44:13,601 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-25 06:44:38] 2025-02-25 11:44:13,758 | INFO     | job 6530067160 has state=finished
[2025-02-25 06:44:38] 2025-02-25 11:44:13,758 | INFO     | preparing for final server update for job 6530067160 in state='finished'
[2025-02-25 06:44:38] 2025-02-25 11:44:13,759 | INFO     | this job has now completed (state=finished)
[2025-02-25 06:44:38] 2025-02-25 11:44:13,759 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-25 06:44:38] 2025-02-25 11:44:13,759 | INFO     | log transfer has been attempted: DONE
[2025-02-25 06:44:38] 2025-02-25 11:44:13,759 | INFO     | job 6530067160 has finished - writing final server update
[2025-02-25 06:44:38] 2025-02-25 11:44:13,760 | INFO     | total number of processed events: 400 (read)
[2025-02-25 06:44:38] 2025-02-25 11:44:13,761 | INFO     | executing command: lscpu
[2025-02-25 06:44:38] 2025-02-25 11:44:13,789 | INFO     | found 12 cores (6 cores per socket, 2 sockets)
[2025-02-25 06:44:38] 2025-02-25 11:44:13,803 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-25 06:44:38] 2025-02-25 11:44:19,010 | INFO     | CPU arch script returned: x86-64-v2
[2025-02-25 06:44:38] 2025-02-25 11:44:19,011 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6530067160/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 06:44:38] 2025-02-25 11:44:19,012 | INFO     | extracted standard info from prmon json
[2025-02-25 06:44:38] 2025-02-25 11:44:19,012 | INFO     | extracted standard memory fields from prmon json
[2025-02-25 06:44:38] 2025-02-25 11:44:19,016 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-25 06:44:38] 2025-02-25 11:44:19,017 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 06:44:38] 2025-02-25 11:44:19,017 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 06:44:38] 2025-02-25 11:44:19,020 | INFO     | fitting pss+swap vs Time
[2025-02-25 06:44:38] 2025-02-25 11:44:19,020 | INFO     | model: linear, x: [1740479122.0, 1740479183.0, 1740479244.0, 1740479305.0, 1740479366.0, 1740479427.0, 1740479488.0, 1740479549.0, 1740479610.0, 1740479671.0, 1740
[2025-02-25 06:44:38] 2025-02-25 11:44:19,020 | INFO     | sum of square deviations: 136095575.0
[2025-02-25 06:44:38] 2025-02-25 11:44:19,021 | INFO     | sum of deviations: 19595548042.499996
[2025-02-25 06:44:38] 2025-02-25 11:44:19,021 | INFO     | mean x: 1740481409.5
[2025-02-25 06:44:38] 2025-02-25 11:44:19,021 | INFO     | mean y: 2667212.2763157897
[2025-02-25 06:44:38] 2025-02-25 11:44:19,021 | INFO     | -- intersect: -250598331952.72488
[2025-02-25 06:44:38] 2025-02-25 11:44:19,022 | INFO     | intersect: -250598331952.72488
[2025-02-25 06:44:38] 2025-02-25 11:44:19,022 | INFO     | chi2: 2.4414496691949727
[2025-02-25 06:44:38] 2025-02-25 11:44:19,022 | INFO     | -- intersect: -250598331952.72488
[2025-02-25 06:44:38] 2025-02-25 11:44:19,022 | INFO     | current memory leak: 143.98 B/s (using 76 data points, chi2=2.44)
[2025-02-25 06:44:38] 2025-02-25 11:44:19,023 | INFO     | ..............................
[2025-02-25 06:44:38] 2025-02-25 11:44:19,023 | INFO     | . Timing measurements:
[2025-02-25 06:44:38] 2025-02-25 11:44:19,023 | INFO     | . get job = 0 s
[2025-02-25 06:44:38] 2025-02-25 11:44:19,023 | INFO     | . initial setup = 2 s
[2025-02-25 06:44:38] 2025-02-25 11:44:19,023 | INFO     | . payload setup = 7 s
[2025-02-25 06:44:38] 2025-02-25 11:44:19,023 | INFO     | . stage-in = 0 s
[2025-02-25 06:44:38] 2025-02-25 11:44:19,023 | INFO     | . payload execution = 5037 s
[2025-02-25 06:44:38] 2025-02-25 11:44:19,024 | INFO     | . stage-out = 0 s
[2025-02-25 06:44:38] 2025-02-25 11:44:19,024 | INFO     | . log creation = 0 s
[2025-02-25 06:44:38] 2025-02-25 11:44:19,024 | INFO     | ..............................
[2025-02-25 06:44:38] 2025-02-25 11:44:19,110 | WARNING  | process 30699 can no longer be monitored (due to stat problems) - aborting
[2025-02-25 06:44:38] 2025-02-25 11:44:19,110 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6530067160/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 06:44:38] 2025-02-25 11:44:19,176 | INFO     | number of running child processes to parent process 30699: 1
[2025-02-25 06:44:38] 2025-02-25 11:44:19,176 | INFO     | maximum number of monitored processes: 6
[2025-02-25 06:44:38] 2025-02-25 11:44:19,176 | INFO     | aborting job monitoring since job object (job id=6530067160) has expired
[2025-02-25 06:44:38] 2025-02-25 11:44:19,503 | INFO     | 
[2025-02-25 06:44:38] 2025-02-25 11:44:19,504 | INFO     | job summary report
[2025-02-25 06:44:38] 2025-02-25 11:44:19,504 | INFO     | --------------------------------------------------
[2025-02-25 06:44:38] 2025-02-25 11:44:19,504 | INFO     | PanDA job id: 6530067160
[2025-02-25 06:44:38] 2025-02-25 11:44:19,504 | INFO     | task id: 43401137
[2025-02-25 06:44:38] 2025-02-25 11:44:19,504 | INFO     | errors: (none)
[2025-02-25 06:44:38] 2025-02-25 11:44:19,504 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 06:44:38] 2025-02-25 11:44:19,505 | INFO     | pilot state: finished 
[2025-02-25 06:44:38] 2025-02-25 11:44:19,505 | INFO     | transexitcode: 0
[2025-02-25 06:44:38] 2025-02-25 11:44:19,505 | INFO     | exeerrorcode: 0
[2025-02-25 06:44:38] 2025-02-25 11:44:19,505 | INFO     | exeerrordiag: 
[2025-02-25 06:44:38] 2025-02-25 11:44:19,505 | INFO     | exitcode: 0
[2025-02-25 06:44:38] 2025-02-25 11:44:19,505 | INFO     | exitmsg: OK
[2025-02-25 06:44:38] 2025-02-25 11:44:19,506 | INFO     | cpuconsumptiontime: 46924 s
[2025-02-25 06:44:38] 2025-02-25 11:44:19,506 | INFO     | nevents: 400
[2025-02-25 06:44:38] 2025-02-25 11:44:19,506 | INFO     | neventsw: 0
[2025-02-25 06:44:38] 2025-02-25 11:44:19,506 | INFO     | pid: 30699
[2025-02-25 06:44:38] 2025-02-25 11:44:19,506 | INFO     | pgrp: 30699
[2025-02-25 06:44:38] 2025-02-25 11:44:19,506 | INFO     | corecount: 12
[2025-02-25 06:44:38] 2025-02-25 11:44:19,506 | INFO     | event service: False
[2025-02-25 06:44:38] 2025-02-25 11:44:19,507 | INFO     | sizes: {0: 2383367, 5: 2383573, 11: 2383629, 5048: 2409736, 5050: 2418733, 5055: 2418847}
[2025-02-25 06:44:38] 2025-02-25 11:44:19,507 | INFO     | --------------------------------------------------
[2025-02-25 06:44:38] 2025-02-25 11:44:19,507 | INFO     | 
[2025-02-25 06:44:38] 2025-02-25 11:44:19,507 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-25 06:44:38] 2025-02-25 11:44:19,530 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 06:44:38] 2025-02-25 11:44:19,531 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 06:44:38] 2025-02-25 11:44:19,531 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 06:44:38] 2025-02-25 11:44:19,531 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 06:44:38] 2025-02-25 11:44:19,531 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 06:44:38] 2025-02-25 11:44:19,531 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 06:44:38] 2025-02-25 11:44:19,532 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 06:44:38] 2025-02-25 11:44:19,532 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 06:44:38] 2025-02-25 11:44:19,532 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 06:44:38] 2025-02-25 11:44:19,532 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 06:44:38] 2025-02-25 11:44:19,532 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 06:44:38] 2025-02-25 11:44:19,532 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 06:44:38] 2025-02-25 11:44:19,533 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 06:44:38] 2025-02-25 11:44:19,533 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 06:44:38] 2025-02-25 11:44:19,533 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 06:44:38] 2025-02-25 11:44:19,533 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 06:44:38] 2025-02-25 11:44:19,533 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 06:44:38] 2025-02-25 11:44:19,533 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 06:44:38] 2025-02-25 11:44:19,534 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 06:44:38] 2025-02-25 11:44:19,534 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 06:44:38] 2025-02-25 11:44:19,534 | INFO     | job 6530067160 has completed (purged errors)
[2025-02-25 06:44:38] 2025-02-25 11:44:19,534 | INFO     | overall cleanup function is called
[2025-02-25 06:44:38] 2025-02-25 11:44:20,542 | INFO     | --- collectZombieJob: --- 10, [30699]
[2025-02-25 06:44:38] 2025-02-25 11:44:20,543 | INFO     | zombie collector waiting for pid 30699
[2025-02-25 06:44:38] 2025-02-25 11:44:20,543 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 06:44:38] 2025-02-25 11:44:20,543 | INFO     | collected zombie processes
[2025-02-25 06:44:38] 2025-02-25 11:44:20,543 | INFO     | will attempt to kill all subprocesses of pid=30699
[2025-02-25 06:44:38] 2025-02-25 11:44:20,606 | INFO     | process IDs to be killed: [30699] (in reverse order)
[2025-02-25 06:44:38] 2025-02-25 11:44:20,656 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 06:44:38] 2025-02-25 11:44:20,656 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 06:44:38] 2025-02-25 11:44:20,659 | INFO     | did not find any defunct processes belonging to 30699
[2025-02-25 06:44:38] 2025-02-25 11:44:20,662 | INFO     | did not find any defunct processes belonging to 30699
[2025-02-25 06:44:38] 2025-02-25 11:44:20,662 | INFO     | ready for new job
[2025-02-25 06:44:38] 2025-02-25 11:44:20,662 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 06:44:38] 2025-02-25 11:44:20,664 | INFO     | **************************************
[2025-02-25 06:44:38] 2025-02-25 11:44:20,664 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 06:44:38] 2025-02-25 11:44:20,664 | INFO     | **************************************
[2025-02-25 06:44:38] 2025-02-25 11:44:20,664 | INFO     | 
[2025-02-25 06:44:38] 2025-02-25 11:44:20,665 | INFO     | architecture information:
[2025-02-25 06:44:38] 2025-02-25 11:44:20,666 | INFO     | executing command: cat /etc/os-release
[2025-02-25 06:44:38] 2025-02-25 11:44:20,681 | INFO     | cat /etc/os-release:
[2025-02-25 06:44:38] NAME="CentOS Linux"
[2025-02-25 06:44:38] VERSION="7 (Core)"
[2025-02-25 06:44:38] ID="centos"
[2025-02-25 06:44:38] ID_LIKE="rhel fedora"
[2025-02-25 06:44:38] VERSION_ID="7"
[2025-02-25 06:44:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 06:44:38] ANSI_COLOR="0;31"
[2025-02-25 06:44:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 06:44:38] HOME_URL="https://www.centos.org/"
[2025-02-25 06:44:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 06:44:38] 
[2025-02-25 06:44:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 06:44:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 06:44:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 06:44:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 06:44:38] 
[2025-02-25 06:44:38] 2025-02-25 11:44:20,682 | INFO     | **************************************
[2025-02-25 06:44:38] 2025-02-25 11:44:21,184 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-25 06:44:38] 2025-02-25 11:44:21,202 | INFO     | sufficient remaining disk space (29366419456 B)
[2025-02-25 06:44:38] 2025-02-25 11:44:21,202 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 06:44:38] 2025-02-25 11:44:21,203 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 06:44:38] 2025-02-25 11:44:21,203 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-25 06:44:38] 2025-02-25 11:44:21,203 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 06:44:38] 2025-02-25 11:44:21,203 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 06:44:38] 2025-02-25 11:44:21,204 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 06:44:38] 2025-02-25 11:44:21,565 | INFO     | all payload control threads have been joined
[2025-02-25 06:44:38] 2025-02-25 11:44:21,613 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 06:44:38] 2025-02-25 11:44:21,679 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-02-25 06:44:38] 2025-02-25 11:44:21,680 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-02-25 06:44:38] 2025-02-25 11:44:21,680 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 06:44:38] 2025-02-25 11:44:21,680 | INFO     | will abort loop
[2025-02-25 06:44:38] 2025-02-25 11:44:21,819 | INFO     | all data control threads have been joined
[2025-02-25 06:44:38] 2025-02-25 11:44:22,208 | INFO     | [job] retrieve thread has finished
[2025-02-25 06:44:38] 2025-02-25 11:44:22,260 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 06:44:38] 2025-02-25 11:44:22,278 | INFO     | all job control threads have been joined
[2025-02-25 06:44:38] 2025-02-25 11:44:22,391 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 06:44:38] 2025-02-25 11:44:22,479 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 06:44:38] 2025-02-25 11:44:22,570 | INFO     | [payload] control thread has finished
[2025-02-25 06:44:38] 2025-02-25 11:44:22,686 | INFO     | [job] job monitor thread has finished
[2025-02-25 06:44:38] 2025-02-25 11:44:22,824 | INFO     | [data] control thread has finished
[2025-02-25 06:44:38] 2025-02-25 11:44:22,943 | INFO     | [payload] validate_post thread has finished
[2025-02-25 06:44:38] 2025-02-25 11:44:22,974 | INFO     | [payload] failed_post thread has finished
[2025-02-25 06:44:38] 2025-02-25 11:44:23,283 | INFO     | [job] control thread has finished
[2025-02-25 06:44:38] 2025-02-25 11:44:23,337 | INFO     | [data] copytool_in thread has finished
[2025-02-25 06:44:38] 2025-02-25 11:44:23,614 | INFO     | [data] copytool_out thread has finished
[2025-02-25 06:44:38] 2025-02-25 11:44:23,632 | INFO     | [job] validate thread has finished
[2025-02-25 06:44:38] 2025-02-25 11:44:24,119 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 06:44:38] 2025-02-25 11:44:24,189 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 06:44:38] 2025-02-25 11:44:25,124 | INFO     | [job] queue monitor thread has finished
[2025-02-25 06:44:38] 2025-02-25 11:44:28,195 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 06:44:38] 2025-02-25 11:44:31,472 | INFO     | job.realtimelogging is not enabled
[2025-02-25 06:44:38] 2025-02-25 11:44:32,477 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 06:44:38] 2025-02-25 11:44:32,828 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140423421081408)>', '<ExcThread(monitor, started 140422428989184)>']
[2025-02-25 06:44:38] 2025-02-25 11:44:33,257 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 06:44:38] 2025-02-25 11:44:33,257 | INFO     | [monitor] control thread has ended
[2025-02-25 06:44:38] 2025-02-25 11:44:37,853 | INFO     | all workflow threads have been joined
[2025-02-25 06:44:38] 2025-02-25 11:44:37,854 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 06:44:38] 2025-02-25 11:44:37,854 | INFO     | traces error code: 0
[2025-02-25 06:44:38] 2025-02-25 11:44:37,854 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 06:44:38] 2025-02-25 11:44:37,949 [wrapper] ==== pilot stdout END ====
[2025-02-25 06:44:38] 2025-02-25 11:44:37,953 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 06:44:38] 2025-02-25 11:44:37,957 [wrapper] pilotpid: 23474
[2025-02-25 06:44:38] 2025-02-25 11:44:37,961 [wrapper] Pilot exit status: 0
[2025-02-25 06:44:38] 2025-02-25 11:44:37,976 [wrapper] pandaids: 6530067160
[2025-02-25 06:44:38] 2025-02-25 11:44:38,023 [wrapper] cleanup supervisor_pilot  9860 23475
[2025-02-25 06:44:38] 2025-02-25 11:44:38,027 [wrapper] Test setup, not cleaning
[2025-02-25 06:44:38] 2025-02-25 11:44:38,035 [wrapper] apfmon messages muted
[2025-02-25 06:44:38] 2025-02-25 11:44:38,039 [wrapper] ==== wrapper stdout END ====
[2025-02-25 06:44:38] 2025-02-25 11:44:38,043 [wrapper] ==== wrapper stderr END ====
[2025-02-25 06:44:38]  *** Error codes and diagnostics ***
[2025-02-25 06:44:38]     "exeErrorCode": 0,
[2025-02-25 06:44:38]     "exeErrorDiag": "",
[2025-02-25 06:44:38]     "pilotErrorCode": 0,
[2025-02-25 06:44:38]     "pilotErrorDiag": "",
[2025-02-25 06:44:38]  *** Listing of results directory ***
[2025-02-25 06:44:38] total 429264
[2025-02-25 06:44:38] -rw-r--r-- 1 boincer umatlas    491065 Feb 25 05:12 pilot3.tar.gz
[2025-02-25 06:44:38] -rwx------ 1 boincer umatlas     35865 Feb 25 05:18 runpilot2-wrapper.sh
[2025-02-25 06:44:38] -rw-r--r-- 1 boincer umatlas      5118 Feb 25 05:18 queuedata.json
[2025-02-25 06:44:38] -rw-r--r-- 1 boincer umatlas       100 Feb 25 05:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 06:44:38] -rwxr-xr-x 1 boincer umatlas      7986 Feb 25 05:19 run_atlas
[2025-02-25 06:44:38] -rw-r--r-- 1 boincer umatlas       105 Feb 25 05:19 job.xml
[2025-02-25 06:44:38] -rw-r--r-- 2 boincer umatlas 249265368 Feb 25 05:19 EVNT.43401135._000008.pool.root.1
[2025-02-25 06:44:38] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 05:19 start_atlas.sh
[2025-02-25 06:44:38] drwxrwx--x 2 boincer umatlas      4096 Feb 25 05:19 shared
[2025-02-25 06:44:38] -rw-r--r-- 2 boincer umatlas    503556 Feb 25 05:19 input.tar.gz
[2025-02-25 06:44:38] -rw-r--r-- 1 boincer umatlas         0 Feb 25 05:19 boinc_lockfile
[2025-02-25 06:44:38] -rw-r--r-- 1 boincer umatlas      2555 Feb 25 05:19 pandaJob.out
[2025-02-25 06:44:38] -rw------- 1 boincer umatlas       424 Feb 25 05:19 setup.sh.local
[2025-02-25 06:44:38] -rw------- 1 boincer umatlas    988817 Feb 25 05:19 agis_schedconf.cvmfs.json
[2025-02-25 06:44:38] -rw------- 1 boincer umatlas   1582519 Feb 25 05:19 agis_ddmendpoints.agis.ALL.json
[2025-02-25 06:44:38] drwx------ 4 boincer umatlas      4096 Feb 25 05:19 pilot3
[2025-02-25 06:44:38] -rw-r--r-- 1 boincer umatlas      5868 Feb 25 06:39 init_data.xml
[2025-02-25 06:44:38] -rw------- 1 boincer umatlas 184795691 Feb 25 06:43 HITS.43401137._000142.pool.root.1
[2025-02-25 06:44:38] -rw------- 1 boincer umatlas        95 Feb 25 06:43 pilot_heartbeat.json
[2025-02-25 06:44:38] -rw-r--r-- 1 boincer umatlas       529 Feb 25 06:44 boinc_task_state.xml
[2025-02-25 06:44:38] -rw------- 1 boincer umatlas      1044 Feb 25 06:44 memory_monitor_summary.json
[2025-02-25 06:44:38] -rw------- 1 boincer umatlas    371717 Feb 25 06:44 log.43401137._000142.job.log.tgz.1
[2025-02-25 06:44:38] -rw------- 1 boincer umatlas      7755 Feb 25 06:44 heartbeat.json
[2025-02-25 06:44:38] -rw-r--r-- 1 boincer umatlas      8192 Feb 25 06:44 boinc_mmap_file
[2025-02-25 06:44:38] -rw-r--r-- 1 boincer umatlas        27 Feb 25 06:44 wrapper_checkpoint.txt
[2025-02-25 06:44:38] -rw------- 1 boincer umatlas      4596 Feb 25 06:44 pilotlog.txt
[2025-02-25 06:44:38] -rw------- 1 boincer umatlas    474568 Feb 25 06:44 log.43401137._000142.job.log.1
[2025-02-25 06:44:38] -rw------- 1 boincer umatlas       357 Feb 25 06:44 output.list
[2025-02-25 06:44:38] -rw-r--r-- 1 boincer umatlas       620 Feb 25 06:44 runtime_log
[2025-02-25 06:44:38] -rw------- 1 boincer umatlas    870400 Feb 25 06:44 result.tar.gz
[2025-02-25 06:44:38] -rw-r--r-- 1 boincer umatlas     11010 Feb 25 06:44 runtime_log.err
[2025-02-25 06:44:38] -rw------- 1 boincer umatlas       657 Feb 25 06:44 KnFKDm9B766n9Rq4apOajLDm4fhM0noT9bVoFjIUDmCIfKDmV7Mzgm.diag
[2025-02-25 06:44:38] -rw-r--r-- 1 boincer umatlas     21503 Feb 25 06:44 stderr.txt
[2025-02-25 06:44:38] HITS file was successfully produced:
[2025-02-25 06:44:38] -rw------- 1 boincer umatlas 184795691 Feb 25 06:43 shared/HITS.pool.root.1
[2025-02-25 06:44:38]  *** Contents of shared directory: ***
[2025-02-25 06:44:38] total 425264
[2025-02-25 06:44:38] -rw-r--r-- 2 boincer umatlas 249265368 Feb 25 05:19 ATLAS.root_0
[2025-02-25 06:44:38] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 05:19 start_atlas.sh
[2025-02-25 06:44:38] -rw-r--r-- 2 boincer umatlas    503556 Feb 25 05:19 input.tar.gz
[2025-02-25 06:44:38] -rw------- 1 boincer umatlas 184795691 Feb 25 06:43 HITS.pool.root.1
[2025-02-25 06:44:38] -rw------- 1 boincer umatlas    870400 Feb 25 06:44 result.tar.gz
06:44:39 (19791): run_atlas exited; CPU time 46862.241976
06:44:39 (19791): called boinc_finish(0)

</stderr_txt>
]]>

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