Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:46:39 (14587): wrapper (7.7.26015): starting
04:46:39 (14587): wrapper: running run_atlas (--nthreads 10)
[2025-02-25 04:46:39] Arguments: --nthreads 10
[2025-02-25 04:46:39] Threads: 10
[2025-02-25 04:46:39] Checking for CVMFS
[2025-02-25 04:46:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 04:46:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 04:46:39] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 04:46:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 04:46:40] 2.11.2.0 24182 2360 101348 143033 0 342 11713692 18431998 8741 130560 0 3337238 97.720 17208364 49864 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-25 04:46:40] CVMFS is ok
[2025-02-25 04:46:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 04:46:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 04:46:40] Further information can be found at the LHC@home message board.
[2025-02-25 04:46:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 04:46:40] Checking for apptainer binary...
[2025-02-25 04:46:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 04:46:40] Running /usr/bin/apptainer --version
[2025-02-25 04:46:40] apptainer version 1.3.2-1.el7
[2025-02-25 04:46:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 04:46:40] c-211-5.aglt2.org
[2025-02-25 04:46:40] apptainer works
[2025-02-25 04:46:40] Set ATHENA_PROC_NUMBER=10
[2025-02-25 04:46:40] Set ATHENA_CORE_NUMBER=10
[2025-02-25 04:46:40] Starting ATLAS job with PandaID=6530021304
[2025-02-25 04:46:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 11:44:17]  *** The last 200 lines of the pilot log: ***
[2025-02-25 11:44:17] 2025-02-25 16:44:02,726 | INFO     | model: linear, x: [1740476840.0, 1740476901.0, 1740476962.0, 1740477023.0, 1740477084.0, 1740477145.0, 1740477206.0, 1740477267.0, 1740477328.0, 1740477389.0, 1740
[2025-02-25 11:44:17] 2025-02-25 16:44:02,727 | INFO     | sum of square deviations: 20599438394.41984
[2025-02-25 11:44:17] 2025-02-25 16:44:02,732 | INFO     | sum of deviations: 302213743886.44415
[2025-02-25 11:44:17] 2025-02-25 16:44:02,732 | INFO     | mean x: 1740489162.691358
[2025-02-25 11:44:17] 2025-02-25 16:44:02,732 | INFO     | mean y: 2545392.7555555557
[2025-02-25 11:44:17] 2025-02-25 16:44:02,732 | INFO     | -- intersect: -25532118998.54286
[2025-02-25 11:44:17] 2025-02-25 16:44:02,733 | INFO     | intersect: -25532118998.54286
[2025-02-25 11:44:17] 2025-02-25 16:44:02,733 | INFO     | chi2: 5.31518570462263
[2025-02-25 11:44:17] 2025-02-25 16:44:02,734 | INFO     | current chi2=5.31518570462263 (change=30.585737127791408 %)
[2025-02-25 11:44:17] 2025-02-25 16:44:02,734 | INFO     | model: linear, x: [1740476840.0, 1740476901.0, 1740476962.0, 1740477023.0, 1740477084.0, 1740477145.0, 1740477206.0, 1740477267.0, 1740477328.0, 1740477389.0, 1740
[2025-02-25 11:44:17] 2025-02-25 16:44:02,735 | INFO     | sum of square deviations: 19845860922.9375
[2025-02-25 11:44:17] 2025-02-25 16:44:02,739 | INFO     | sum of deviations: 298062186483.5627
[2025-02-25 11:44:17] 2025-02-25 16:44:02,740 | INFO     | mean x: 1740489010.1875
[2025-02-25 11:44:17] 2025-02-25 16:44:02,740 | INFO     | mean y: 2544552.5525
[2025-02-25 11:44:17] 2025-02-25 16:44:02,740 | INFO     | -- intersect: -26137614442.893654
[2025-02-25 11:44:17] 2025-02-25 16:44:02,740 | INFO     | intersect: -26137614442.893654
[2025-02-25 11:44:17] 2025-02-25 16:44:02,741 | INFO     | chi2: 5.3147113304577775
[2025-02-25 11:44:17] 2025-02-25 16:44:02,741 | INFO     | current chi2=5.3147113304577775 (change=0.008924884119099653 %)
[2025-02-25 11:44:17] 2025-02-25 16:44:02,741 | INFO     | right removable region: 399
[2025-02-25 11:44:17] 2025-02-25 16:44:02,742 | INFO     | model: linear, x: [1740477145.0, 1740477206.0, 1740477267.0, 1740477328.0, 1740477389.0, 1740477450.0, 1740477511.0, 1740477572.0, 1740477633.0, 1740477694.0, 1740
[2025-02-25 11:44:17] 2025-02-25 16:44:02,742 | INFO     | sum of square deviations: 20599340185.249424
[2025-02-25 11:44:17] 2025-02-25 16:44:02,747 | INFO     | sum of deviations: 106304233609.47652
[2025-02-25 11:44:17] 2025-02-25 16:44:02,748 | INFO     | mean x: 1740489467.6987655
[2025-02-25 11:44:17] 2025-02-25 16:44:02,748 | INFO     | mean y: 2551796.5530864196
[2025-02-25 11:44:17] 2025-02-25 16:44:02,748 | INFO     | -- intersect: -8979357201.754118
[2025-02-25 11:44:17] 2025-02-25 16:44:02,748 | INFO     | intersect: -8979357201.754118
[2025-02-25 11:44:17] 2025-02-25 16:44:02,749 | INFO     | chi2: 4.864631998743797
[2025-02-25 11:44:17] 2025-02-25 16:44:02,749 | INFO     | current chi2=4.864631998743797 (change=36.469793700023914 %)
[2025-02-25 11:44:17] 2025-02-25 16:44:02,750 | INFO     | model: linear, x: [1740477450.0, 1740477511.0, 1740477572.0, 1740477633.0, 1740477694.0, 1740477755.0, 1740477816.0, 1740477877.0, 1740477938.0, 1740478000.0, 1740
[2025-02-25 11:44:17] 2025-02-25 16:44:02,750 | INFO     | sum of square deviations: 19845714157.77744
[2025-02-25 11:44:17] 2025-02-25 16:44:02,755 | INFO     | sum of deviations: 17683152157.92006
[2025-02-25 11:44:17] 2025-02-25 16:44:02,755 | INFO     | mean x: 1740489620.2075
[2025-02-25 11:44:17] 2025-02-25 16:44:02,755 | INFO     | mean y: 2569730.76
[2025-02-25 11:44:17] 2025-02-25 16:44:02,756 | INFO     | -- intersect: -1548260969.4467862
[2025-02-25 11:44:17] 2025-02-25 16:44:02,756 | INFO     | intersect: -1548260969.4467862
[2025-02-25 11:44:17] 2025-02-25 16:44:02,756 | INFO     | chi2: 3.290149455691681
[2025-02-25 11:44:17] 2025-02-25 16:44:02,757 | INFO     | current chi2=3.290149455691681 (change=32.36591264166946 %)
[2025-02-25 11:44:17] 2025-02-25 16:44:02,757 | INFO     | model: linear, x: [1740477755.0, 1740477816.0, 1740477877.0, 1740477938.0, 1740478000.0, 1740478060.0, 1740478121.0, 1740478182.0, 1740478243.0, 1740478304.0, 1740
[2025-02-25 11:44:17] 2025-02-25 16:44:02,758 | INFO     | sum of square deviations: 19110693130.243034
[2025-02-25 11:44:17] 2025-02-25 16:44:02,762 | INFO     | sum of deviations: -40355599526.6076
[2025-02-25 11:44:17] 2025-02-25 16:44:02,762 | INFO     | mean x: 1740489772.7164557
[2025-02-25 11:44:17] 2025-02-25 16:44:02,762 | INFO     | mean y: 2581739.7088607596
[2025-02-25 11:44:17] 2025-02-25 16:44:02,763 | INFO     | -- intersect: 3677932904.065521
[2025-02-25 11:44:17] 2025-02-25 16:44:02,763 | INFO     | intersect: 3677932904.065521
[2025-02-25 11:44:17] 2025-02-25 16:44:02,763 | INFO     | chi2: 2.499401386656012
[2025-02-25 11:44:17] 2025-02-25 16:44:02,764 | INFO     | current chi2=2.499401386656012 (change=24.033803925464284 %)
[2025-02-25 11:44:17] 2025-02-25 16:44:02,764 | INFO     | left removable region: 30
[2025-02-25 11:44:17] 2025-02-25 16:44:02,764 | INFO     | model: linear, x: [1740478670.0, 1740478731.0, 1740478792.0, 1740478853.0, 1740478915.0, 1740478975.0, 1740479036.0, 1740479098.0, 1740479159.0, 1740479220.0, 1740
[2025-02-25 11:44:17] 2025-02-25 16:44:02,764 | INFO     | sum of square deviations: 15579718242.5419
[2025-02-25 11:44:17] 2025-02-25 16:44:02,769 | INFO     | sum of deviations: 30798328584.2737
[2025-02-25 11:44:17] 2025-02-25 16:44:02,769 | INFO     | mean x: 1740489894.7425475
[2025-02-25 11:44:17] 2025-02-25 16:44:02,769 | INFO     | mean y: 2601088.6449864497
[2025-02-25 11:44:17] 2025-02-25 16:44:02,770 | INFO     | -- intersect: -3438037492.9641223
[2025-02-25 11:44:17] 2025-02-25 16:44:02,770 | INFO     | intersect: -3438037492.9641223
[2025-02-25 11:44:17] 2025-02-25 16:44:02,771 | INFO     | chi2: 0.0026863370501727843
[2025-02-25 11:44:17] 2025-02-25 16:44:02,771 | INFO     | -- intersect: -3438037492.9641223
[2025-02-25 11:44:17] 2025-02-25 16:44:02,771 | INFO     | current memory leak: 1.98 B/s (using 369 data points, chi2=0.00)
[2025-02-25 11:44:17] 2025-02-25 16:44:02,772 | INFO     | ..............................
[2025-02-25 11:44:17] 2025-02-25 16:44:02,772 | INFO     | . Timing measurements:
[2025-02-25 11:44:17] 2025-02-25 16:44:02,772 | INFO     | . get job = 0 s
[2025-02-25 11:44:17] 2025-02-25 16:44:02,772 | INFO     | . initial setup = 2 s
[2025-02-25 11:44:17] 2025-02-25 16:44:02,772 | INFO     | . payload setup = 6 s
[2025-02-25 11:44:17] 2025-02-25 16:44:02,772 | INFO     | . stage-in = 0 s
[2025-02-25 11:44:17] 2025-02-25 16:44:02,772 | INFO     | . payload execution = 24961 s
[2025-02-25 11:44:17] 2025-02-25 16:44:02,773 | INFO     | . stage-out = 3 s
[2025-02-25 11:44:17] 2025-02-25 16:44:02,773 | INFO     | . log creation = 1 s
[2025-02-25 11:44:17] 2025-02-25 16:44:02,773 | INFO     | ..............................
[2025-02-25 11:44:17] 2025-02-25 16:44:02,890 | INFO     | 
[2025-02-25 11:44:17] 2025-02-25 16:44:02,891 | INFO     | job summary report
[2025-02-25 11:44:17] 2025-02-25 16:44:02,891 | INFO     | --------------------------------------------------
[2025-02-25 11:44:17] 2025-02-25 16:44:02,891 | INFO     | PanDA job id: 6530021304
[2025-02-25 11:44:17] 2025-02-25 16:44:02,891 | INFO     | task id: 43401121
[2025-02-25 11:44:17] 2025-02-25 16:44:02,891 | INFO     | errors: (none)
[2025-02-25 11:44:17] 2025-02-25 16:44:02,891 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 11:44:17] 2025-02-25 16:44:02,892 | INFO     | pilot state: finished 
[2025-02-25 11:44:17] 2025-02-25 16:44:02,892 | INFO     | transexitcode: 0
[2025-02-25 11:44:17] 2025-02-25 16:44:02,892 | INFO     | exeerrorcode: 0
[2025-02-25 11:44:17] 2025-02-25 16:44:02,892 | INFO     | exeerrordiag: 
[2025-02-25 11:44:17] 2025-02-25 16:44:02,892 | INFO     | exitcode: 0
[2025-02-25 11:44:17] 2025-02-25 16:44:02,892 | INFO     | exitmsg: OK
[2025-02-25 11:44:17] 2025-02-25 16:44:02,892 | INFO     | cpuconsumptiontime: 50975 s
[2025-02-25 11:44:17] 2025-02-25 16:44:02,892 | INFO     | nevents: 400
[2025-02-25 11:44:17] 2025-02-25 16:44:02,892 | INFO     | neventsw: 0
[2025-02-25 11:44:17] 2025-02-25 16:44:02,893 | INFO     | pid: 38920
[2025-02-25 11:44:17] 2025-02-25 16:44:02,893 | INFO     | pgrp: 38920
[2025-02-25 11:44:17] 2025-02-25 16:44:02,893 | INFO     | corecount: 10
[2025-02-25 11:44:17] 2025-02-25 16:44:02,893 | INFO     | event service: False
[2025-02-25 11:44:17] 2025-02-25 16:44:02,893 | INFO     | sizes: {0: 2383188, 1: 2383387, 5: 2383593, 12: 2383649, 24971: 2418401, 24976: 2428423, 25015: 2428537}
[2025-02-25 11:44:17] 2025-02-25 16:44:02,893 | INFO     | --------------------------------------------------
[2025-02-25 11:44:17] 2025-02-25 16:44:02,893 | INFO     | 
[2025-02-25 11:44:17] 2025-02-25 16:44:02,893 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-02-25 11:44:17] 2025-02-25 16:44:02,951 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 11:44:17] 2025-02-25 16:44:02,951 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 11:44:17] 2025-02-25 16:44:02,951 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 11:44:17] 2025-02-25 16:44:02,951 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 11:44:17] 2025-02-25 16:44:02,951 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 11:44:17] 2025-02-25 16:44:02,952 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 11:44:17] 2025-02-25 16:44:02,952 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 11:44:17] 2025-02-25 16:44:02,952 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 11:44:17] 2025-02-25 16:44:02,952 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 11:44:17] 2025-02-25 16:44:02,952 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 11:44:17] 2025-02-25 16:44:02,952 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 11:44:17] 2025-02-25 16:44:02,952 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 11:44:17] 2025-02-25 16:44:02,952 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 11:44:17] 2025-02-25 16:44:02,953 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 11:44:17] 2025-02-25 16:44:02,953 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 11:44:17] 2025-02-25 16:44:02,953 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 11:44:17] 2025-02-25 16:44:02,953 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 11:44:17] 2025-02-25 16:44:02,953 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 11:44:17] 2025-02-25 16:44:02,953 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 11:44:17] 2025-02-25 16:44:02,953 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 11:44:17] 2025-02-25 16:44:02,954 | INFO     | job 6530021304 has completed (purged errors)
[2025-02-25 11:44:17] 2025-02-25 16:44:02,954 | INFO     | overall cleanup function is called
[2025-02-25 11:44:17] 2025-02-25 16:44:03,970 | INFO     | --- collectZombieJob: --- 10, [38920]
[2025-02-25 11:44:17] 2025-02-25 16:44:03,974 | INFO     | zombie collector waiting for pid 38920
[2025-02-25 11:44:17] 2025-02-25 16:44:03,975 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 11:44:17] 2025-02-25 16:44:03,975 | INFO     | collected zombie processes
[2025-02-25 11:44:17] 2025-02-25 16:44:03,975 | INFO     | will attempt to kill all subprocesses of pid=38920
[2025-02-25 11:44:17] 2025-02-25 16:44:04,347 | INFO     | PID=23769 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-02-25 11:44:17] 2025-02-25 16:44:04,348 | INFO     | .. there are 13 such processes running
[2025-02-25 11:44:17] 2025-02-25 16:44:04,372 | INFO     | process IDs to be killed: [38920] (in reverse order)
[2025-02-25 11:44:17] 2025-02-25 16:44:04,528 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 11:44:17] 2025-02-25 16:44:04,529 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 11:44:17] 2025-02-25 16:44:04,539 | INFO     | did not find any defunct processes belonging to 38920
[2025-02-25 11:44:17] 2025-02-25 16:44:04,548 | INFO     | did not find any defunct processes belonging to 38920
[2025-02-25 11:44:17] 2025-02-25 16:44:04,549 | INFO     | ready for new job
[2025-02-25 11:44:17] 2025-02-25 16:44:04,549 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 11:44:17] 2025-02-25 16:44:04,552 | INFO     | **************************************
[2025-02-25 11:44:17] 2025-02-25 16:44:04,552 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 11:44:17] 2025-02-25 16:44:04,552 | INFO     | **************************************
[2025-02-25 11:44:17] 2025-02-25 16:44:04,552 | INFO     | 
[2025-02-25 11:44:17] 2025-02-25 16:44:04,555 | INFO     | architecture information:
[2025-02-25 11:44:17] 2025-02-25 16:44:04,555 | INFO     | executing command: cat /etc/os-release
[2025-02-25 11:44:17] 2025-02-25 16:44:04,582 | INFO     | cat /etc/os-release:
[2025-02-25 11:44:17] NAME="CentOS Linux"
[2025-02-25 11:44:17] VERSION="7 (Core)"
[2025-02-25 11:44:17] ID="centos"
[2025-02-25 11:44:17] ID_LIKE="rhel fedora"
[2025-02-25 11:44:17] VERSION_ID="7"
[2025-02-25 11:44:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 11:44:17] ANSI_COLOR="0;31"
[2025-02-25 11:44:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 11:44:17] HOME_URL="https://www.centos.org/"
[2025-02-25 11:44:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 11:44:17] 
[2025-02-25 11:44:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 11:44:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 11:44:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 11:44:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 11:44:17] 
[2025-02-25 11:44:17] 2025-02-25 16:44:04,582 | INFO     | **************************************
[2025-02-25 11:44:17] 2025-02-25 16:44:05,085 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-02-25 11:44:17] 2025-02-25 16:44:05,159 | INFO     | sufficient remaining disk space (57039388672 B)
[2025-02-25 11:44:17] 2025-02-25 16:44:05,159 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 11:44:17] 2025-02-25 16:44:05,159 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 11:44:17] 2025-02-25 16:44:05,160 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 11:44:17] 2025-02-25 16:44:05,160 | INFO     | aborting loop
[2025-02-25 11:44:17] 2025-02-25 16:44:05,160 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-25 11:44:17] 2025-02-25 16:44:05,161 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 11:44:17] 2025-02-25 16:44:05,161 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 11:44:17] 2025-02-25 16:44:05,161 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 11:44:17] 2025-02-25 16:44:05,504 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 11:44:17] 2025-02-25 16:44:05,505 | INFO     | all job control threads have been joined
[2025-02-25 11:44:17] 2025-02-25 16:44:05,987 | INFO     | all data control threads have been joined
[2025-02-25 11:44:17] 2025-02-25 16:44:06,166 | INFO     | [job] retrieve thread has finished
[2025-02-25 11:44:17] 2025-02-25 16:44:06,175 | INFO     | [job] job monitor thread has finished
[2025-02-25 11:44:17] 2025-02-25 16:44:06,322 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 11:44:17] 2025-02-25 16:44:06,511 | INFO     | [job] control thread has finished
[2025-02-25 11:44:17] 2025-02-25 16:44:06,605 | INFO     | [payload] failed_post thread has finished
[2025-02-25 11:44:17] 2025-02-25 16:44:06,606 | INFO     | all payload control threads have been joined
[2025-02-25 11:44:17] 2025-02-25 16:44:06,686 | INFO     | [data] copytool_in thread has finished
[2025-02-25 11:44:17] 2025-02-25 16:44:06,717 | INFO     | [job] validate thread has finished
[2025-02-25 11:44:17] 2025-02-25 16:44:06,919 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 11:44:17] 2025-02-25 16:44:06,993 | INFO     | [data] control thread has finished
[2025-02-25 11:44:17] 2025-02-25 16:44:07,246 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 11:44:17] 2025-02-25 16:44:07,269 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 11:44:17] 2025-02-25 16:44:07,428 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 11:44:17] 2025-02-25 16:44:07,612 | INFO     | [payload] control thread has finished
[2025-02-25 11:44:17] 2025-02-25 16:44:07,687 | INFO     | [payload] validate_post thread has finished
[2025-02-25 11:44:17] 2025-02-25 16:44:07,904 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 11:44:17] 2025-02-25 16:44:08,328 | INFO     | [data] copytool_out thread has finished
[2025-02-25 11:44:17] 2025-02-25 16:44:08,909 | INFO     | [job] queue monitor thread has finished
[2025-02-25 11:44:17] 2025-02-25 16:44:09,512 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 11:44:17] 2025-02-25 16:44:11,065 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140113221588800)>', '<ExcThread(monitor, started 140112537040640)>']
[2025-02-25 11:44:17] 2025-02-25 16:44:11,212 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 11:44:17] 2025-02-25 16:44:11,213 | INFO     | [monitor] control thread has ended
[2025-02-25 11:44:17] 2025-02-25 16:44:16,095 | INFO     | all workflow threads have been joined
[2025-02-25 11:44:17] 2025-02-25 16:44:16,100 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 11:44:17] 2025-02-25 16:44:16,101 | INFO     | traces error code: 0
[2025-02-25 11:44:17] 2025-02-25 16:44:16,101 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 11:44:17] 2025-02-25 16:44:16,638 [wrapper] ==== pilot stdout END ====
[2025-02-25 11:44:17] 2025-02-25 16:44:16,641 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 11:44:17] 2025-02-25 16:44:16,645 [wrapper] pilotpid: 23769
[2025-02-25 11:44:17] 2025-02-25 16:44:16,663 [wrapper] Pilot exit status: 0
[2025-02-25 11:44:17] 2025-02-25 16:44:16,708 [wrapper] pandaids: 6530021304
[2025-02-25 11:44:17] 2025-02-25 16:44:16,811 [wrapper] cleanup supervisor_pilot 38232 23771
[2025-02-25 11:44:17] 2025-02-25 16:44:16,827 [wrapper] Test setup, not cleaning
[2025-02-25 11:44:17] 2025-02-25 16:44:16,833 [wrapper] apfmon messages muted
[2025-02-25 11:44:17] 2025-02-25 16:44:16,836 [wrapper] ==== wrapper stdout END ====
[2025-02-25 11:44:17] 2025-02-25 16:44:16,838 [wrapper] ==== wrapper stderr END ====
[2025-02-25 11:44:17]  *** Error codes and diagnostics ***
[2025-02-25 11:44:17]     "exeErrorCode": 0,
[2025-02-25 11:44:17]     "exeErrorDiag": "",
[2025-02-25 11:44:17]     "pilotErrorCode": 0,
[2025-02-25 11:44:17]     "pilotErrorDiag": "",
[2025-02-25 11:44:17]  *** Listing of results directory ***
[2025-02-25 11:44:17] total 433788
[2025-02-25 11:44:17] -rw-r--r-- 1 boincer umatlas    491065 Feb 25 04:08 pilot3.tar.gz
[2025-02-25 11:44:17] -rw-r--r-- 1 boincer umatlas      5118 Feb 25 04:44 queuedata.json
[2025-02-25 11:44:17] -rwx------ 1 boincer umatlas     35865 Feb 25 04:45 runpilot2-wrapper.sh
[2025-02-25 11:44:17] -rw-r--r-- 1 boincer umatlas       100 Feb 25 04:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 11:44:17] -rwxr-xr-x 1 boincer umatlas      7986 Feb 25 04:46 run_atlas
[2025-02-25 11:44:17] -rw-r--r-- 1 boincer umatlas       105 Feb 25 04:46 job.xml
[2025-02-25 11:44:17] -rw-r--r-- 2 boincer umatlas 254493271 Feb 25 04:46 EVNT.43401119._000027.pool.root.1
[2025-02-25 11:44:17] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 04:46 start_atlas.sh
[2025-02-25 11:44:17] drwxrwx--x 2 boincer umatlas      4096 Feb 25 04:46 shared
[2025-02-25 11:44:17] -rw-r--r-- 2 boincer umatlas    503548 Feb 25 04:46 input.tar.gz
[2025-02-25 11:44:17] -rw-r--r-- 1 boincer umatlas         0 Feb 25 04:46 boinc_lockfile
[2025-02-25 11:44:17] -rw-r--r-- 1 boincer umatlas      2546 Feb 25 04:46 pandaJob.out
[2025-02-25 11:44:17] -rw------- 1 boincer umatlas       467 Feb 25 04:46 setup.sh.local
[2025-02-25 11:44:17] -rw------- 1 boincer umatlas    988789 Feb 25 04:46 agis_schedconf.cvmfs.json
[2025-02-25 11:44:17] drwx------ 4 boincer umatlas      4096 Feb 25 04:46 pilot3
[2025-02-25 11:44:17] -rw-r--r-- 1 boincer umatlas      6228 Feb 25 11:38 init_data.xml
[2025-02-25 11:44:17] -rw------- 1 boincer umatlas 179491940 Feb 25 11:39 HITS.43401121._000339.pool.root.1
[2025-02-25 11:44:17] -rw-r--r-- 1 boincer umatlas       531 Feb 25 11:40 boinc_task_state.xml
[2025-02-25 11:44:17] -rw------- 1 boincer umatlas      1057 Feb 25 11:43 memory_monitor_summary.json
[2025-02-25 11:44:17] -rw------- 1 boincer umatlas   1577983 Feb 25 11:43 agis_ddmendpoints.agis.ALL.json
[2025-02-25 11:44:17] -rw------- 1 boincer umatlas    553907 Feb 25 11:43 log.43401121._000339.job.log.tgz.1
[2025-02-25 11:44:17] -rw------- 1 boincer umatlas        95 Feb 25 11:43 pilot_heartbeat.json
[2025-02-25 11:44:17] -rw------- 1 boincer umatlas      7757 Feb 25 11:44 heartbeat.json
[2025-02-25 11:44:17] -rw-r--r-- 1 boincer umatlas      8192 Feb 25 11:44 boinc_mmap_file
[2025-02-25 11:44:17] -rw-r--r-- 1 boincer umatlas        28 Feb 25 11:44 wrapper_checkpoint.txt
[2025-02-25 11:44:17] -rw------- 1 boincer umatlas      4338 Feb 25 11:44 pilotlog.txt
[2025-02-25 11:44:17] -rw------- 1 boincer umatlas   2659268 Feb 25 11:44 log.43401121._000339.job.log.1
[2025-02-25 11:44:17] -rw------- 1 boincer umatlas       357 Feb 25 11:44 output.list
[2025-02-25 11:44:17] -rw-r--r-- 1 boincer umatlas       620 Feb 25 11:44 runtime_log
[2025-02-25 11:44:17] -rw------- 1 boincer umatlas   3235840 Feb 25 11:44 result.tar.gz
[2025-02-25 11:44:17] -rw------- 1 boincer umatlas       661 Feb 25 11:44 MnULDmNg666n9Rq4apOajLDm4fhM0noT9bVoFjIUDmGHfKDm98nN6m.diag
[2025-02-25 11:44:17] -rw-r--r-- 1 boincer umatlas     11416 Feb 25 11:44 runtime_log.err
[2025-02-25 11:44:17] -rw-r--r-- 1 boincer umatlas      2137 Feb 25 11:44 stderr.txt
[2025-02-25 11:44:17] HITS file was successfully produced:
[2025-02-25 11:44:17] -rw------- 1 boincer umatlas 179491940 Feb 25 11:39 shared/HITS.pool.root.1
[2025-02-25 11:44:17]  *** Contents of shared directory: ***
[2025-02-25 11:44:17] total 427496
[2025-02-25 11:44:17] -rw-r--r-- 2 boincer umatlas 254493271 Feb 25 04:46 ATLAS.root_0
[2025-02-25 11:44:17] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 04:46 start_atlas.sh
[2025-02-25 11:44:17] -rw-r--r-- 2 boincer umatlas    503548 Feb 25 04:46 input.tar.gz
[2025-02-25 11:44:17] -rw------- 1 boincer umatlas 179491940 Feb 25 11:39 HITS.pool.root.1
[2025-02-25 11:44:17] -rw------- 1 boincer umatlas   3235840 Feb 25 11:44 result.tar.gz
11:44:19 (14587): run_atlas exited; CPU time 50802.274864
11:44:19 (14587): called boinc_finish(0)

</stderr_txt>
]]>

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