Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:55:00 (204324): wrapper (7.7.26015): starting
07:55:00 (204324): wrapper: running run_atlas (--nthreads 8)
[2025-02-24 07:55:00] Arguments: --nthreads 8
[2025-02-24 07:55:00] Threads: 8
[2025-02-24 07:55:00] Checking for CVMFS
[2025-02-24 07:55:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-24 07:55:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-24 07:55:02] Running cvmfs_config stat atlas.cern.ch
[2025-02-24 07:55:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-24 07:55:04] 2.11.5.0 4008888 76789 885872 143009 0 384 17113321 37641216 28771 130560 0 2988208 99.187 5990935 25628 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-02-24 07:55:04] CVMFS is ok
[2025-02-24 07:55:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-24 07:55:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-24 07:55:04] Further information can be found at the LHC@home message board.
[2025-02-24 07:55:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-24 07:55:04] Checking for apptainer binary...
[2025-02-24 07:55:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-24 07:55:04] Running /usr/bin/apptainer --version
[2025-02-24 07:55:04] apptainer version 1.3.6-1.el9
[2025-02-24 07:55:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-24 07:55:06] c-1-1.aglt2.org
[2025-02-24 07:55:06] apptainer works
[2025-02-24 07:55:06] Set ATHENA_PROC_NUMBER=8
[2025-02-24 07:55:06] Set ATHENA_CORE_NUMBER=8
[2025-02-24 07:55:06] Starting ATLAS job with PandaID=6528605401
[2025-02-24 07:55:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-24 18:32:21]  *** The last 200 lines of the pilot log: ***
[2025-02-24 18:32:21] 2025-02-24 23:32:02,633 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-24 18:32:21] 2025-02-24 23:32:02,978 | INFO     | PID=222577 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-02-24 18:32:21] 2025-02-24 23:32:02,978 | INFO     | .. there are 79 such processes running
[2025-02-24 18:32:21] 2025-02-24 23:32:04,771 | INFO     | CPU arch script returned: x86-64-v4
[2025-02-24 18:32:21] 2025-02-24 23:32:04,772 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6528605401/memory_monitor_summary.json (trf name=prmon)
[2025-02-24 18:32:21] 2025-02-24 23:32:04,772 | INFO     | extracted standard info from prmon json
[2025-02-24 18:32:21] 2025-02-24 23:32:04,773 | INFO     | extracted standard memory fields from prmon json
[2025-02-24 18:32:21] 2025-02-24 23:32:04,773 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-24 18:32:21] 2025-02-24 23:32:04,784 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-24 18:32:21] 2025-02-24 23:32:04,785 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-24 18:32:21] 2025-02-24 23:32:04,873 | INFO     | fitting pss+swap vs Time
[2025-02-24 18:32:21] 2025-02-24 23:32:04,874 | INFO     | model: linear, x: [1740402038.0, 1740402099.0, 1740402160.0, 1740402221.0, 1740402283.0, 1740402343.0, 1740402405.0, 1740402465.0, 1740402526.0, 1740402587.0, 1740
[2025-02-24 18:32:21] 2025-02-24 23:32:04,874 | INFO     | sum of square deviations: 74255855693.76808
[2025-02-24 18:32:21] 2025-02-24 23:32:04,884 | INFO     | sum of deviations: 417961233479.21783
[2025-02-24 18:32:21] 2025-02-24 23:32:04,884 | INFO     | mean x: 1740420948.352657
[2025-02-24 18:32:21] 2025-02-24 23:32:04,884 | INFO     | mean y: 2132128.565217391
[2025-02-24 18:32:21] 2025-02-24 23:32:04,884 | INFO     | -- intersect: -9794111946.06331
[2025-02-24 18:32:21] 2025-02-24 23:32:04,884 | INFO     | intersect: -9794111946.06331
[2025-02-24 18:32:21] 2025-02-24 23:32:04,885 | INFO     | chi2: 12.445632056679868
[2025-02-24 18:32:21] 2025-02-24 23:32:04,886 | INFO     | model: linear, x: [1740402038.0, 1740402099.0, 1740402160.0, 1740402221.0, 1740402283.0, 1740402343.0, 1740402405.0, 1740402465.0, 1740402526.0, 1740402587.0, 1740
[2025-02-24 18:32:21] 2025-02-24 23:32:04,888 | INFO     | sum of square deviations: 72476614708.1413
[2025-02-24 18:32:21] 2025-02-24 23:32:04,896 | INFO     | sum of deviations: 488280777406.4903
[2025-02-24 18:32:21] 2025-02-24 23:32:04,897 | INFO     | mean x: 1740420795.8555195
[2025-02-24 18:32:21] 2025-02-24 23:32:04,897 | INFO     | mean y: 2138130.061688312
[2025-02-24 18:32:21] 2025-02-24 23:32:04,898 | INFO     | -- intersect: -11723216629.358334
[2025-02-24 18:32:21] 2025-02-24 23:32:04,898 | INFO     | intersect: -11723216629.358334
[2025-02-24 18:32:21] 2025-02-24 23:32:04,899 | INFO     | chi2: 11.152912291385757
[2025-02-24 18:32:21] 2025-02-24 23:32:04,899 | INFO     | current chi2=11.152912291385757 (change=10.386935427681049 %)
[2025-02-24 18:32:21] 2025-02-24 23:32:04,899 | INFO     | right removable region: 615
[2025-02-24 18:32:21] 2025-02-24 23:32:04,900 | INFO     | model: linear, x: [1740402343.0, 1740402405.0, 1740402465.0, 1740402526.0, 1740402587.0, 1740402649.0, 1740402709.0, 1740402770.0, 1740402831.0, 1740402893.0, 1740
[2025-02-24 18:32:21] 2025-02-24 23:32:04,901 | INFO     | sum of square deviations: 72476518754.85054
[2025-02-24 18:32:21] 2025-02-24 23:32:04,955 | INFO     | sum of deviations: 248704561367.07816
[2025-02-24 18:32:21] 2025-02-24 23:32:04,955 | INFO     | mean x: 1740421100.8538961
[2025-02-24 18:32:21] 2025-02-24 23:32:04,955 | INFO     | mean y: 2146626.4675324676
[2025-02-24 18:32:21] 2025-02-24 23:32:04,955 | INFO     | -- intersect: -5970141694.195037
[2025-02-24 18:32:21] 2025-02-24 23:32:04,956 | INFO     | intersect: -5970141694.195037
[2025-02-24 18:32:21] 2025-02-24 23:32:04,956 | INFO     | chi2: 8.565782472421457
[2025-02-24 18:32:21] 2025-02-24 23:32:04,957 | INFO     | current chi2=8.565782472421457 (change=31.174387661380386 %)
[2025-02-24 18:32:21] 2025-02-24 23:32:04,991 | INFO     | model: linear, x: [1740402649.0, 1740402709.0, 1740402770.0, 1740402831.0, 1740402893.0, 1740402954.0, 1740403014.0, 1740403076.0, 1740403137.0, 1740403198.0, 1740
[2025-02-24 18:32:21] 2025-02-24 23:32:04,994 | INFO     | sum of square deviations: 70725833881.93127
[2025-02-24 18:32:21] 2025-02-24 23:32:05,112 | INFO     | sum of deviations: 125349363430.61534
[2025-02-24 18:32:21] 2025-02-24 23:32:05,112 | INFO     | mean x: 1740421253.3551555
[2025-02-24 18:32:21] 2025-02-24 23:32:05,112 | INFO     | mean y: 2157370.153846154
[2025-02-24 18:32:21] 2025-02-24 23:32:05,112 | INFO     | -- intersect: -3082439646.7350163
[2025-02-24 18:32:21] 2025-02-24 23:32:05,113 | INFO     | intersect: -3082439646.7350163
[2025-02-24 18:32:21] 2025-02-24 23:32:05,113 | INFO     | chi2: 6.569892649775946
[2025-02-24 18:32:21] 2025-02-24 23:32:05,113 | INFO     | current chi2=6.569892649775946 (change=23.3007297240096 %)
[2025-02-24 18:32:21] 2025-02-24 23:32:05,113 | INFO     | left removable region: 20
[2025-02-24 18:32:21] 2025-02-24 23:32:05,114 | INFO     | model: linear, x: [1740403258.0, 1740403319.0, 1740403381.0, 1740403442.0, 1740403504.0, 1740403563.0, 1740403624.0, 1740403685.0, 1740403748.0, 1740403808.0, 1740
[2025-02-24 18:32:21] 2025-02-24 23:32:05,114 | INFO     | sum of square deviations: 65313732708.17408
[2025-02-24 18:32:21] 2025-02-24 23:32:05,198 | INFO     | monitor loop #2060: job 0:6528605401 is in state 'finished'
[2025-02-24 18:32:21] 2025-02-24 23:32:05,198 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-24 18:32:21] 2025-02-24 23:32:05,200 | INFO     | sum of deviations: 339086756.4219444
[2025-02-24 18:32:21] 2025-02-24 23:32:05,200 | INFO     | mean x: 1740421375.354622
[2025-02-24 18:32:21] 2025-02-24 23:32:05,200 | INFO     | mean y: 2181866.519327731
[2025-02-24 18:32:21] 2025-02-24 23:32:05,201 | INFO     | -- intersect: -6853811.193554842
[2025-02-24 18:32:21] 2025-02-24 23:32:05,201 | INFO     | intersect: -6853811.193554842
[2025-02-24 18:32:21] 2025-02-24 23:32:05,201 | INFO     | chi2: 2.557970762211071
[2025-02-24 18:32:21] 2025-02-24 23:32:05,202 | INFO     | -- intersect: -6853811.193554842
[2025-02-24 18:32:21] 2025-02-24 23:32:05,202 | INFO     | current memory leak: 0.01 B/s (using 595 data points, chi2=2.56)
[2025-02-24 18:32:21] 2025-02-24 23:32:05,203 | INFO     | ..............................
[2025-02-24 18:32:21] 2025-02-24 23:32:05,203 | INFO     | . Timing measurements:
[2025-02-24 18:32:21] 2025-02-24 23:32:05,203 | INFO     | . get job = 0 s
[2025-02-24 18:32:21] 2025-02-24 23:32:05,243 | INFO     | . initial setup = 8 s
[2025-02-24 18:32:21] 2025-02-24 23:32:05,243 | INFO     | . payload setup = 70 s
[2025-02-24 18:32:21] 2025-02-24 23:32:05,243 | INFO     | . stage-in = 0 s
[2025-02-24 18:32:21] 2025-02-24 23:32:05,243 | INFO     | . payload execution = 37880 s
[2025-02-24 18:32:21] 2025-02-24 23:32:05,244 | INFO     | . stage-out = 7 s
[2025-02-24 18:32:21] 2025-02-24 23:32:05,244 | INFO     | . log creation = 1 s
[2025-02-24 18:32:21] 2025-02-24 23:32:05,244 | INFO     | ..............................
[2025-02-24 18:32:21] 2025-02-24 23:32:05,842 | INFO     | 
[2025-02-24 18:32:21] 2025-02-24 23:32:05,842 | INFO     | job summary report
[2025-02-24 18:32:21] 2025-02-24 23:32:05,842 | INFO     | --------------------------------------------------
[2025-02-24 18:32:21] 2025-02-24 23:32:05,842 | INFO     | PanDA job id: 6528605401
[2025-02-24 18:32:21] 2025-02-24 23:32:05,842 | INFO     | task id: 43205075
[2025-02-24 18:32:21] 2025-02-24 23:32:05,842 | INFO     | errors: (none)
[2025-02-24 18:32:21] 2025-02-24 23:32:05,842 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-24 18:32:21] 2025-02-24 23:32:05,843 | INFO     | pilot state: finished 
[2025-02-24 18:32:21] 2025-02-24 23:32:05,843 | INFO     | transexitcode: 0
[2025-02-24 18:32:21] 2025-02-24 23:32:05,843 | INFO     | exeerrorcode: 0
[2025-02-24 18:32:21] 2025-02-24 23:32:05,843 | INFO     | exeerrordiag: 
[2025-02-24 18:32:21] 2025-02-24 23:32:05,843 | INFO     | exitcode: 0
[2025-02-24 18:32:21] 2025-02-24 23:32:05,843 | INFO     | exitmsg: OK
[2025-02-24 18:32:21] 2025-02-24 23:32:05,843 | INFO     | cpuconsumptiontime: 96157 s
[2025-02-24 18:32:21] 2025-02-24 23:32:05,843 | INFO     | nevents: 400
[2025-02-24 18:32:21] 2025-02-24 23:32:05,843 | INFO     | neventsw: 0
[2025-02-24 18:32:21] 2025-02-24 23:32:05,843 | INFO     | pid: 261934
[2025-02-24 18:32:21] 2025-02-24 23:32:05,843 | INFO     | pgrp: 261934
[2025-02-24 18:32:21] 2025-02-24 23:32:05,843 | INFO     | corecount: 8
[2025-02-24 18:32:21] 2025-02-24 23:32:05,843 | INFO     | event service: False
[2025-02-24 18:32:21] 2025-02-24 23:32:05,843 | INFO     | sizes: {0: 2382490, 1: 2383091, 2: 2383203, 3: 2383402, 14: 2383402, 26: 2383430, 38: 2383586, 50: 2383614, 56: 2383848, 61: 2383876, 37955: 2423828, 37956: 242410
[2025-02-24 18:32:21] 2025-02-24 23:32:05,844 | INFO     | --------------------------------------------------
[2025-02-24 18:32:21] 2025-02-24 23:32:05,844 | INFO     | 
[2025-02-24 18:32:21] 2025-02-24 23:32:05,844 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-02-24 18:32:21] 2025-02-24 23:32:05,958 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-24 18:32:21] 2025-02-24 23:32:05,958 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-24 18:32:21] 2025-02-24 23:32:05,958 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-24 18:32:21] 2025-02-24 23:32:05,958 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-24 18:32:21] 2025-02-24 23:32:05,959 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-24 18:32:21] 2025-02-24 23:32:05,959 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-24 18:32:21] 2025-02-24 23:32:05,959 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-24 18:32:21] 2025-02-24 23:32:05,959 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-24 18:32:21] 2025-02-24 23:32:05,959 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-24 18:32:21] 2025-02-24 23:32:05,959 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-24 18:32:21] 2025-02-24 23:32:05,959 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-24 18:32:21] 2025-02-24 23:32:05,959 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-24 18:32:21] 2025-02-24 23:32:05,959 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-24 18:32:21] 2025-02-24 23:32:05,959 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-24 18:32:21] 2025-02-24 23:32:05,959 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-24 18:32:21] 2025-02-24 23:32:05,959 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-24 18:32:21] 2025-02-24 23:32:05,959 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-24 18:32:21] 2025-02-24 23:32:05,959 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-24 18:32:21] 2025-02-24 23:32:05,960 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-24 18:32:21] 2025-02-24 23:32:05,960 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-24 18:32:21] 2025-02-24 23:32:05,960 | INFO     | job 6528605401 has completed (purged errors)
[2025-02-24 18:32:21] 2025-02-24 23:32:05,960 | INFO     | overall cleanup function is called
[2025-02-24 18:32:21] 2025-02-24 23:32:06,969 | INFO     | --- collectZombieJob: --- 10, [261934]
[2025-02-24 18:32:21] 2025-02-24 23:32:06,969 | INFO     | zombie collector waiting for pid 261934
[2025-02-24 18:32:21] 2025-02-24 23:32:06,969 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-24 18:32:21] 2025-02-24 23:32:06,970 | INFO     | collected zombie processes
[2025-02-24 18:32:21] 2025-02-24 23:32:06,970 | INFO     | will attempt to kill all subprocesses of pid=261934
[2025-02-24 18:32:21] 2025-02-24 23:32:07,621 | INFO     | process IDs to be killed: [261934] (in reverse order)
[2025-02-24 18:32:21] 2025-02-24 23:32:08,015 | WARNING  | found no corresponding commands to process id(s)
[2025-02-24 18:32:21] 2025-02-24 23:32:08,015 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-24 18:32:21] 2025-02-24 23:32:08,081 | INFO     | did not find any defunct processes belonging to 261934
[2025-02-24 18:32:21] 2025-02-24 23:32:08,110 | INFO     | did not find any defunct processes belonging to 261934
[2025-02-24 18:32:21] 2025-02-24 23:32:08,110 | INFO     | ready for new job
[2025-02-24 18:32:21] 2025-02-24 23:32:08,110 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-24 18:32:21] 2025-02-24 23:32:08,113 | INFO     | **************************************
[2025-02-24 18:32:21] 2025-02-24 23:32:08,113 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-24 18:32:21] 2025-02-24 23:32:08,113 | INFO     | **************************************
[2025-02-24 18:32:21] 2025-02-24 23:32:08,114 | INFO     | 
[2025-02-24 18:32:21] 2025-02-24 23:32:08,119 | INFO     | architecture information:
[2025-02-24 18:32:21] 2025-02-24 23:32:08,121 | INFO     | executing command: cat /etc/os-release
[2025-02-24 18:32:21] 2025-02-24 23:32:08,169 | INFO     | cat /etc/os-release:
[2025-02-24 18:32:21] NAME="CentOS Linux"
[2025-02-24 18:32:21] VERSION="7 (Core)"
[2025-02-24 18:32:21] ID="centos"
[2025-02-24 18:32:21] ID_LIKE="rhel fedora"
[2025-02-24 18:32:21] VERSION_ID="7"
[2025-02-24 18:32:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-24 18:32:21] ANSI_COLOR="0;31"
[2025-02-24 18:32:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-24 18:32:21] HOME_URL="https://www.centos.org/"
[2025-02-24 18:32:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-24 18:32:21] 
[2025-02-24 18:32:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-24 18:32:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-24 18:32:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-24 18:32:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-24 18:32:21] 
[2025-02-24 18:32:21] 2025-02-24 23:32:08,169 | INFO     | **************************************
[2025-02-24 18:32:21] 2025-02-24 23:32:08,672 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-02-24 18:32:21] 2025-02-24 23:32:08,838 | INFO     | sufficient remaining disk space (74305241088 B)
[2025-02-24 18:32:21] 2025-02-24 23:32:08,838 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-24 18:32:21] 2025-02-24 23:32:08,838 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-24 18:32:21] 2025-02-24 23:32:08,846 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-24 18:32:21] 2025-02-24 23:32:08,846 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-24 18:32:21] 2025-02-24 23:32:08,847 | INFO     | aborting loop
[2025-02-24 18:32:21] 2025-02-24 23:32:09,015 | INFO     | found 0 job(s) in 20 queues
[2025-02-24 18:32:21] 2025-02-24 23:32:09,016 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-24 18:32:21] 2025-02-24 23:32:09,016 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-24 18:32:21] 2025-02-24 23:32:09,579 | INFO     | all job control threads have been joined
[2025-02-24 18:32:21] 2025-02-24 23:32:09,844 | INFO     | [job] retrieve thread has finished
[2025-02-24 18:32:21] 2025-02-24 23:32:09,854 | INFO     | [job] job monitor thread has finished
[2025-02-24 18:32:21] 2025-02-24 23:32:09,857 | INFO     | all payload control threads have been joined
[2025-02-24 18:32:21] 2025-02-24 23:32:09,981 | INFO     | all data control threads have been joined
[2025-02-24 18:32:21] 2025-02-24 23:32:10,055 | INFO     | [data] copytool_in thread has finished
[2025-02-24 18:32:21] 2025-02-24 23:32:10,063 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-24 18:32:21] 2025-02-24 23:32:10,079 | INFO     | [payload] validate_pre thread has finished
[2025-02-24 18:32:21] 2025-02-24 23:32:10,080 | INFO     | [job] validate thread has finished
[2025-02-24 18:32:21] 2025-02-24 23:32:10,257 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-24 18:32:21] 2025-02-24 23:32:10,361 | INFO     | [job] create_data_payload thread has finished
[2025-02-24 18:32:21] 2025-02-24 23:32:10,585 | INFO     | [job] control thread has finished
[2025-02-24 18:32:21] 2025-02-24 23:32:10,746 | INFO     | [payload] failed_post thread has finished
[2025-02-24 18:32:21] 2025-02-24 23:32:10,859 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-24 18:32:21] 2025-02-24 23:32:10,863 | INFO     | [payload] control thread has finished
[2025-02-24 18:32:21] 2025-02-24 23:32:10,917 | INFO     | [payload] execute_payloads thread has finished
[2025-02-24 18:32:21] 2025-02-24 23:32:10,987 | INFO     | [data] control thread has finished
[2025-02-24 18:32:21] 2025-02-24 23:32:11,450 | INFO     | [payload] validate_post thread has finished
[2025-02-24 18:32:21] 2025-02-24 23:32:11,865 | INFO     | [job] queue monitor thread has finished
[2025-02-24 18:32:21] 2025-02-24 23:32:12,269 | INFO     | [data] copytool_out thread has finished
[2025-02-24 18:32:21] 2025-02-24 23:32:12,858 | INFO     | [data] queue_monitor thread has finished
[2025-02-24 18:32:21] 2025-02-24 23:32:14,159 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140612036441920)>', '<ExcThread(monitor, started 140611290117888)>']
[2025-02-24 18:32:21] 2025-02-24 23:32:15,050 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-24 18:32:21] 2025-02-24 23:32:15,050 | INFO     | [monitor] control thread has ended
[2025-02-24 18:32:21] 2025-02-24 23:32:19,185 | INFO     | all workflow threads have been joined
[2025-02-24 18:32:21] 2025-02-24 23:32:19,185 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-24 18:32:21] 2025-02-24 23:32:19,210 | INFO     | traces error code: 0
[2025-02-24 18:32:21] 2025-02-24 23:32:19,211 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-24 18:32:21] 2025-02-24 23:32:19,682 [wrapper] ==== pilot stdout END ====
[2025-02-24 18:32:21] 2025-02-24 23:32:19,710 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-24 18:32:21] 2025-02-24 23:32:19,729 [wrapper] pilotpid: 222577
[2025-02-24 18:32:21] 2025-02-24 23:32:19,732 [wrapper] Pilot exit status: 0
[2025-02-24 18:32:21] 2025-02-24 23:32:19,911 [wrapper] pandaids: 6528605401
[2025-02-24 18:32:21] 2025-02-24 23:32:20,644 [wrapper] cleanup supervisor_pilot 2207296 222578
[2025-02-24 18:32:21] 2025-02-24 23:32:20,695 [wrapper] Test setup, not cleaning
[2025-02-24 18:32:21] 2025-02-24 23:32:20,828 [wrapper] apfmon messages muted
[2025-02-24 18:32:21] 2025-02-24 23:32:20,853 [wrapper] ==== wrapper stdout END ====
[2025-02-24 18:32:21] 2025-02-24 23:32:20,864 [wrapper] ==== wrapper stderr END ====
[2025-02-24 18:32:21]  *** Error codes and diagnostics ***
[2025-02-24 18:32:21]     "exeErrorCode": 0,
[2025-02-24 18:32:21]     "exeErrorDiag": "",
[2025-02-24 18:32:21]     "pilotErrorCode": 0,
[2025-02-24 18:32:21]     "pilotErrorDiag": "",
[2025-02-24 18:32:21]  *** Listing of results directory ***
[2025-02-24 18:32:21] total 656808
[2025-02-24 18:32:21] -rw-r--r--. 1 boincer umatlas    491065 Feb 24 07:38 pilot3.tar.gz
[2025-02-24 18:32:21] -rw-r--r--. 1 boincer umatlas      5118 Feb 24 07:52 queuedata.json
[2025-02-24 18:32:21] -rwx------. 1 boincer umatlas     35865 Feb 24 07:54 runpilot2-wrapper.sh
[2025-02-24 18:32:21] -rw-r--r--. 1 boincer umatlas       100 Feb 24 07:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-24 18:32:21] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 24 07:54 run_atlas
[2025-02-24 18:32:21] -rw-r--r--. 1 boincer umatlas       105 Feb 24 07:54 job.xml
[2025-02-24 18:32:21] -rw-r--r--. 2 boincer umatlas 340542513 Feb 24 07:55 EVNT.43092757._000637.pool.root.1
[2025-02-24 18:32:21] -rw-r--r--. 2 boincer umatlas     17569 Feb 24 07:55 start_atlas.sh
[2025-02-24 18:32:21] drwxrwx--x. 2 boincer umatlas      4096 Feb 24 07:55 shared
[2025-02-24 18:32:21] -rw-r--r--. 2 boincer umatlas    503556 Feb 24 07:55 input.tar.gz
[2025-02-24 18:32:21] -rw-r--r--. 1 boincer umatlas         0 Feb 24 07:55 boinc_lockfile
[2025-02-24 18:32:21] -rw-r--r--. 1 boincer umatlas      2556 Feb 24 07:55 pandaJob.out
[2025-02-24 18:32:21] -rw-------. 1 boincer umatlas       467 Feb 24 07:55 setup.sh.local
[2025-02-24 18:32:21] -rw-------. 1 boincer umatlas    987749 Feb 24 07:56 agis_schedconf.cvmfs.json
[2025-02-24 18:32:21] drwx------. 4 boincer umatlas      4096 Feb 24 07:56 pilot3
[2025-02-24 18:32:21] -rw-r--r--. 1 boincer umatlas      6838 Feb 24 18:29 init_data.xml
[2025-02-24 18:32:21] -rw-------. 1 boincer umatlas 318556028 Feb 24 18:29 HITS.43205075._060797.pool.root.1
[2025-02-24 18:32:21] -rw-r--r--. 1 boincer umatlas       532 Feb 24 18:29 boinc_task_state.xml
[2025-02-24 18:32:21] -rw-------. 1 boincer umatlas      1041 Feb 24 18:31 memory_monitor_summary.json
[2025-02-24 18:32:21] -rw-------. 1 boincer umatlas   1582569 Feb 24 18:31 agis_ddmendpoints.agis.ALL.json
[2025-02-24 18:32:21] -rw-------. 1 boincer umatlas    669312 Feb 24 18:31 log.43205075._060797.job.log.tgz.1
[2025-02-24 18:32:21] -rw-------. 1 boincer umatlas        95 Feb 24 18:31 pilot_heartbeat.json
[2025-02-24 18:32:21] -rw-------. 1 boincer umatlas      7732 Feb 24 18:32 heartbeat.json
[2025-02-24 18:32:21] -rw-------. 1 boincer umatlas      4215 Feb 24 18:32 pilotlog.txt
[2025-02-24 18:32:21] -rw-r--r--. 1 boincer umatlas        28 Feb 24 18:32 wrapper_checkpoint.txt
[2025-02-24 18:32:21] -rw-------. 1 boincer umatlas   4161214 Feb 24 18:32 log.43205075._060797.job.log.1
[2025-02-24 18:32:21] -rw-------. 1 boincer umatlas       357 Feb 24 18:32 output.list
[2025-02-24 18:32:21] -rw-r--r--. 1 boincer umatlas       620 Feb 24 18:32 runtime_log
[2025-02-24 18:32:21] -rw-------. 1 boincer umatlas   4853760 Feb 24 18:32 result.tar.gz
[2025-02-24 18:32:21] -rw-r--r--. 1 boincer umatlas     11404 Feb 24 18:32 runtime_log.err
[2025-02-24 18:32:21] -rw-------. 1 boincer umatlas       655 Feb 24 18:32 JJxNDme9m66n9Rq4apOajLDm4fhM0noT9bVoFjIUDmODfKDmLHIyYn.diag
[2025-02-24 18:32:21] -rw-r--r--. 1 boincer umatlas     21812 Feb 24 18:32 stderr.txt
[2025-02-24 18:32:21] -rw-r--r--. 1 boincer umatlas      8192 Feb 24 18:32 boinc_mmap_file
[2025-02-24 18:32:21] HITS file was successfully produced:
[2025-02-24 18:32:21] -rw-------. 1 boincer umatlas 318556028 Feb 24 18:29 shared/HITS.pool.root.1
[2025-02-24 18:32:21]  *** Contents of shared directory: ***
[2025-02-24 18:32:21] total 648916
[2025-02-24 18:32:21] -rw-r--r--. 2 boincer umatlas 340542513 Feb 24 07:55 ATLAS.root_0
[2025-02-24 18:32:21] -rw-r--r--. 2 boincer umatlas     17569 Feb 24 07:55 start_atlas.sh
[2025-02-24 18:32:21] -rw-r--r--. 2 boincer umatlas    503556 Feb 24 07:55 input.tar.gz
[2025-02-24 18:32:21] -rw-------. 1 boincer umatlas 318556028 Feb 24 18:29 HITS.pool.root.1
[2025-02-24 18:32:21] -rw-------. 1 boincer umatlas   4853760 Feb 24 18:32 result.tar.gz
18:32:43 (204324): run_atlas exited; CPU time 96400.943535
18:32:43 (204324): called boinc_finish(0)

</stderr_txt>
]]>

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