Stderr output

<core_client_version>7.16.20</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-24 10:19:09 (15836): Detected: vboxwrapper 26206
2025-02-24 10:19:09 (15836): Detected: BOINC client v7.16.20
2025-02-24 10:19:09 (15836): Detected: VirtualBox VboxManage Interface (Version: 6.1.50)
2025-02-24 10:19:10 (15836): Successfully copied 'init_data.xml' to the shared directory.
2025-02-24 10:19:10 (15836): Create VM. (boinc_5241b3d0c47256d3, slot#8)
2025-02-24 10:19:11 (15836): Setting Memory Size for VM. (4800MB)
2025-02-24 10:19:11 (15836): Setting CPU Count for VM. (8)
2025-02-24 10:19:11 (15836): Setting Chipset Options for VM.
2025-02-24 10:19:11 (15836): Setting Graphics Controller Options for VM.
2025-02-24 10:19:12 (15836): Setting Boot Options for VM.
2025-02-24 10:19:12 (15836): Setting Network Configuration for NAT.
2025-02-24 10:19:12 (15836): Enabling VM Network Access.
2025-02-24 10:19:12 (15836): Disabling USB Support for VM.
2025-02-24 10:19:13 (15836): Disabling COM Port Support for VM.
2025-02-24 10:19:13 (15836): Disabling LPT Port Support for VM.
2025-02-24 10:19:13 (15836): Disabling Audio Support for VM.
2025-02-24 10:19:14 (15836): Disabling Clipboard Support for VM.
2025-02-24 10:19:14 (15836): Disabling Drag and Drop Support for VM.
2025-02-24 10:19:14 (15836): Adding storage controller(s) to VM.
2025-02-24 10:19:14 (15836): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-24 10:19:15 (15836): Adding VirtualBox Guest Additions to VM.
2025-02-24 10:19:15 (15836): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-24 10:19:15 (15836): forwarding host port 50789 to guest port 80
2025-02-24 10:19:16 (15836): Enabling remote desktop for VM.
2025-02-24 10:19:16 (15836): Required extension pack not installed, remote desktop not enabled.
2025-02-24 10:19:16 (15836): Enabling shared directory for VM.
2025-02-24 10:19:16 (15836): Starting VM using VBoxManage interface. (boinc_5241b3d0c47256d3, slot#8)
2025-02-24 10:19:20 (15836): Successfully started VM. (PID = '16884')
2025-02-24 10:19:20 (15836): Reporting VM Process ID to BOINC.
2025-02-24 10:19:20 (15836): Guest Log: BIOS: VirtualBox 6.1.50
2025-02-24 10:19:20 (15836): Guest Log: CPUID EDX: 0x178bfbff
2025-02-24 10:19:20 (15836): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-24 10:19:20 (15836): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-24 10:19:20 (15836): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-24 10:19:20 (15836): Detected: Web Application Enabled (http://localhost:50789)
2025-02-24 10:19:20 (15836): Preference change detected
2025-02-24 10:19:20 (15836): Setting CPU throttle for VM. (100%)
2025-02-24 10:19:20 (15836): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-24 10:19:22 (15836): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-24 10:19:22 (15836): Guest Log: BIOS: Booting from Hard Disk...
2025-02-24 10:19:24 (15836): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-24 10:19:24 (15836): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-24 10:19:24 (15836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-24 10:19:24 (15836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-24 10:19:24 (15836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-24 10:19:24 (15836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-24 10:19:24 (15836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-24 10:19:24 (15836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-24 10:19:24 (15836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-24 10:19:24 (15836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-24 10:19:24 (15836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-24 10:19:24 (15836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-24 10:19:24 (15836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-24 10:19:24 (15836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-24 10:19:24 (15836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-24 10:19:24 (15836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-24 10:19:24 (15836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-24 10:19:24 (15836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-24 10:19:24 (15836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-24 10:19:24 (15836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-24 10:19:24 (15836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-24 10:19:24 (15836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-24 10:19:24 (15836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-24 10:19:24 (15836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-24 10:19:24 (15836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-24 10:19:24 (15836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-24 10:19:24 (15836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-24 10:19:24 (15836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-24 10:19:24 (15836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-24 10:19:24 (15836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-24 10:19:24 (15836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-24 10:19:24 (15836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-24 10:19:53 (15836): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-24 10:19:53 (15836): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-24 10:19:58 (15836): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-24 10:19:58 (15836): Guest Log: 00:00:00.000092 main     Log opened 2025-02-24T10:19:56.016532000Z
2025-02-24 10:19:58 (15836): Guest Log: 00:00:00.000155 main     OS Product: Linux
2025-02-24 10:19:58 (15836): Guest Log: 00:00:00.000175 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-24 10:19:58 (15836): Guest Log: 00:00:00.000190 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-24 10:19:58 (15836): Guest Log: 00:00:00.000206 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-24 10:19:58 (15836): Guest Log: 00:00:00.000207 main     Process ID: 1368
2025-02-24 10:19:58 (15836): Guest Log: 00:00:00.000207 main     Package type: LINUX_64BITS_GENERIC
2025-02-24 10:19:58 (15836): Guest Log: 00:00:00.000803 main     5.2.32 r132073 started. Verbose level = 0
2025-02-24 10:19:58 (15836): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-24 10:19:58 (15836): Guest Log: [INFO] Mounting shared directory
2025-02-24 10:19:58 (15836): Guest Log: [INFO] Checking for init_data.xml
2025-02-24 10:20:00 (15836): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-24 10:20:00 (15836): Guest Log: [INFO] Detected branch: prod
2025-02-24 10:20:00 (15836): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-24 10:20:00 (15836): Guest Log: Copying input files
2025-02-24 10:20:02 (15836): Guest Log: Copied input files into RunAtlas.
2025-02-24 10:20:02 (15836): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-24 10:20:02 (15836): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-24 10:20:02 (15836): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-24 10:20:02 (15836): Guest Log: Further information can be found at the LHC@home message board.
2025-02-24 10:20:08 (15836): Guest Log: 00:00:10.011564 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 614 606 176 000ns (GuestNow=1 740 388 781 411 894 000 ns GuestLast=1 740 392 396 018 070 000 ns fSetTimeLastLoop=true )
2025-02-24 10:20:09 (15836): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-24 10:20:09 (15836): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-24 10:20:09 (15836): Guest Log: 2.6.3.0 1644 0 32188 143005 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-02-24 10:20:10 (15836): Guest Log: copied the webapp to /var/www
2025-02-24 10:20:10 (15836): Guest Log: ATHENA_PROC_NUMBER=8
2025-02-24 10:20:10 (15836): Guest Log: ATHENA_CORE_NUMBER=8
2025-02-24 10:20:10 (15836): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-24 10:20:10 (15836): Guest Log:  *** Starting ATLAS job. (PandaID=6525982233 taskID=43205075) ***
2025-02-24 11:48:19 (15836): Preference change detected
2025-02-24 11:48:19 (15836): Setting CPU throttle for VM. (100%)
2025-02-24 11:48:20 (15836): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-24 11:59:26 (15836): Status Report: Elapsed Time: '6000.000000'
2025-02-24 11:59:26 (15836): Status Report: CPU Time: '40762.750000'
2025-02-24 12:34:35 (15836): Guest Log:  *** Job finished ***
2025-02-24 12:34:35 (15836): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-24 12:34:35 (15836): Guest Log: 2025-02-24 11:33:53,849 | INFO     | [data] queue_monitor thread has finished
2025-02-24 12:34:35 (15836): Guest Log: 2025-02-24 11:33:59,849 | INFO     | job.realtimelogging is not enabled
2025-02-24 12:34:35 (15836): Guest Log: 2025-02-24 11:34:00,856 | INFO     | [payload] run_realtimelog thread has finished
2025-02-24 12:34:35 (15836): Guest Log: 2025-02-24 11:34:02,073 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140317481568064)>', '<ExcThread(monitor, started 140316296337152)>']
2025-02-24 12:34:35 (15836): Guest Log: 2025-02-24 11:34:03,006 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-24 12:34:35 (15836): Guest Log: 2025-02-24 11:34:03,006 | INFO     | [monitor] control thread has ended
2025-02-24 12:34:35 (15836): Guest Log: 2025-02-24 11:34:07,111 | INFO     | all workflow threads have been joined
2025-02-24 12:34:35 (15836): Guest Log: 2025-02-24 11:34:07,111 | INFO     | end of generic workflow (traces error code: 0)
2025-02-24 12:34:35 (15836): Guest Log: 2025-02-24 11:34:07,111 | INFO     | traces error code: 0
2025-02-24 12:34:35 (15836): Guest Log: 2025-02-24 11:34:07,111 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-24 12:34:35 (15836): Guest Log: 2025-02-24 11:34:07,161 [wrapper] ==== pilot stdout END ====
2025-02-24 12:34:35 (15836): Guest Log: 2025-02-24 11:34:07,164 [wrapper] ==== wrapper stdout RESUME ====
2025-02-24 12:34:35 (15836): Guest Log: 2025-02-24 11:34:07,168 [wrapper] pilotpid: 6016
2025-02-24 12:34:35 (15836): Guest Log: 2025-02-24 11:34:07,171 [wrapper] Pilot exit status: 0
2025-02-24 12:34:35 (15836): Guest Log: 2025-02-24 11:34:07,236 [wrapper] pandaids: 6525982233
2025-02-24 12:34:35 (15836): Guest Log: 2025-02-24 11:34:07,263 [wrapper] cleanup supervisor_pilot  5460 6017
2025-02-24 12:34:35 (15836): Guest Log: 2025-02-24 11:34:07,267 [wrapper] Test setup, not cleaning
2025-02-24 12:34:35 (15836): Guest Log: 2025-02-24 11:34:07,276 [wrapper] apfmon messages muted
2025-02-24 12:34:35 (15836): Guest Log: 2025-02-24 11:34:07,279 [wrapper] ==== wrapper stdout END ====
2025-02-24 12:34:35 (15836): Guest Log: 2025-02-24 11:34:07,283 [wrapper] ==== wrapper stderr END ====
2025-02-24 12:34:35 (15836): Guest Log:  *** Error codes and diagnostics ***
2025-02-24 12:34:35 (15836): Guest Log:     "exeErrorCode": 0,
2025-02-24 12:34:35 (15836): Guest Log:     "exeErrorDiag": "",
2025-02-24 12:34:35 (15836): Guest Log:     "pilotErrorCode": 0,
2025-02-24 12:34:35 (15836): Guest Log:     "pilotErrorDiag": "",
2025-02-24 12:34:35 (15836): Guest Log:  *** Listing of results directory ***
2025-02-24 12:34:35 (15836): Guest Log: total 320824
2025-02-24 12:34:35 (15836): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 23 15:03 queuedata.json
2025-02-24 12:34:35 (15836): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 23 15:03 pilot3.tar.gz
2025-02-24 12:34:35 (15836): Guest Log: -rwx------. 1 atlas atlas     35865 Feb 23 15:04 runpilot2-wrapper.sh
2025-02-24 12:34:35 (15836): Guest Log: -rwxr-xr-x. 1 atlas atlas      8792 Feb 24 09:19 init_data.xml
2025-02-24 12:34:35 (15836): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb 24 09:19 start_atlas.sh
2025-02-24 12:34:35 (15836): Guest Log: -rwxr-xr-x. 1 atlas atlas    503562 Feb 24 09:19 input.tar.gz
2025-02-24 12:34:35 (15836): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 24 09:19 EVNT.43092757._000841.pool.root.1 -> /data/./ATLAS.root_0
2025-02-24 12:34:35 (15836): Guest Log: -rw-r--r--. 1 atlas atlas      2556 Feb 24 09:19 pandaJob.out
2025-02-24 12:34:35 (15836): Guest Log: -rw-------. 1 atlas atlas       424 Feb 24 09:19 setup.sh.local
2025-02-24 12:34:35 (15836): Guest Log: -rw-------. 1 atlas atlas    987741 Feb 24 09:20 agis_schedconf.cvmfs.json
2025-02-24 12:34:35 (15836): Guest Log: -rw-------. 1 atlas atlas   1582569 Feb 24 09:20 agis_ddmendpoints.agis.ALL.json
2025-02-24 12:34:35 (15836): Guest Log: drwx------. 4 atlas atlas      4096 Feb 24 09:20 pilot3
2025-02-24 12:34:35 (15836): Guest Log: -rw-------. 1 atlas atlas 322758135 Feb 24 11:33 HITS.43205075._060421.pool.root.1
2025-02-24 12:34:35 (15836): Guest Log: -rw-------. 1 atlas atlas        95 Feb 24 11:33 pilot_heartbeat.json
2025-02-24 12:34:35 (15836): Guest Log: -rw-------. 1 atlas atlas      1027 Feb 24 11:33 memory_monitor_summary.json
2025-02-24 12:34:35 (15836): Guest Log: -rw-------. 1 atlas atlas    325768 Feb 24 11:33 log.43205075._060421.job.log.tgz.1
2025-02-24 12:34:35 (15836): Guest Log: -rw-------. 1 atlas atlas      7703 Feb 24 11:33 heartbeat.json
2025-02-24 12:34:35 (15836): Guest Log: -rw-------. 1 atlas atlas      4470 Feb 24 11:34 pilotlog.txt
2025-02-24 12:34:35 (15836): Guest Log: -rw-------. 1 atlas atlas    685047 Feb 24 11:34 log.43205075._060421.job.log.1
2025-02-24 12:34:35 (15836): Guest Log: -rw-------. 1 atlas atlas       357 Feb 24 11:34 output.list
2025-02-24 12:34:35 (15836): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 24 11:34 runtime_log
2025-02-24 12:34:35 (15836): Guest Log: -rw-------. 1 atlas atlas   1034240 Feb 24 11:34 result.tar.gz
2025-02-24 12:34:35 (15836): Guest Log: -rw-------. 1 atlas atlas       654 Feb 24 11:34 UwbKDmYiS66nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmCfvKDmvaMwOo.diag
2025-02-24 12:34:35 (15836): Guest Log: -rw-r--r--. 1 atlas atlas     10935 Feb 24 11:34 runtime_log.err
2025-02-24 12:34:35 (15836): Guest Log: Looking for outputfile HITS.43205075._060421.pool.root.1
2025-02-24 12:34:35 (15836): Guest Log: HITS file was successfully produced
2025-02-24 12:34:35 (15836): Guest Log: -rw-------. 1 atlas atlas 322758135 Feb 24 11:33 /home/atlas/RunAtlas/HITS.43205075._060421.pool.root.1
2025-02-24 12:34:36 (15836): Guest Log: Successfully finished the ATLAS job!
2025-02-24 12:34:36 (15836): Guest Log: Copying the results back to the shared directory!
2025-02-24 12:34:36 (15836): Guest Log:  *** Contents of shared directory: ***
2025-02-24 12:34:36 (15836): Guest Log: total 653756
2025-02-24 12:34:36 (15836): Guest Log: -rwxrwxrwx. 1 root root 345111534 Feb 24 09:19 ATLAS.root_0
2025-02-24 12:34:36 (15836): Guest Log: -rwxrwxrwx. 1 root root 322758135 Feb 24  2025 HITS.pool.root.1
2025-02-24 12:34:36 (15836): Guest Log: -rwxrwxrwx. 1 root root      8792 Feb 24 09:19 init_data.xml
2025-02-24 12:34:36 (15836): Guest Log: -rwxrwxrwx. 1 root root    503562 Feb 24 07:59 input.tar.gz
2025-02-24 12:34:36 (15836): Guest Log: -rwxrwxrwx. 1 root root   1034240 Feb 24  2025 result.tar.gz
2025-02-24 12:34:36 (15836): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb 24 07:59 start_atlas.sh
2025-02-24 12:34:36 (15836): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-24 12:34:36 (15836): VM Completion File Detected.
2025-02-24 12:34:36 (15836): Powering off VM.
2025-02-24 12:34:37 (15836): Successfully stopped VM.
2025-02-24 12:34:37 (15836): Deregistering VM. (boinc_5241b3d0c47256d3, slot#8)
2025-02-24 12:34:37 (15836): Removing network bandwidth throttle group from VM.
2025-02-24 12:34:37 (15836): Removing VM from VirtualBox.
12:34:43 (15836): called boinc_finish(0)

</stderr_txt>
]]>

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