Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:07:11 (16404): wrapper (7.7.26015): starting
02:07:11 (16404): wrapper: running run_atlas (--nthreads 8)
[2025-02-24 02:07:11] Arguments: --nthreads 8
[2025-02-24 02:07:11] Threads: 8
[2025-02-24 02:07:11] Checking for CVMFS
[2025-02-24 02:07:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-24 02:07:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-24 02:07:11] Running cvmfs_config stat atlas.cern.ch
[2025-02-24 02:07:12] /usr/bin/cvmfs_config: line 944: cd: /cvmfs/minerva.osgstorage.org: Transport endpoint is not connected
[2025-02-24 02:07:12] 
[2025-02-24 02:07:12] CVMFS is ok
[2025-02-24 02:07:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-24 02:07:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-24 02:07:12] Further information can be found at the LHC@home message board.
[2025-02-24 02:07:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-24 02:07:12] Checking for apptainer binary...
[2025-02-24 02:07:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-24 02:07:12] Running /usr/bin/apptainer --version
[2025-02-24 02:07:12] apptainer version 1.3.2-1.el7
[2025-02-24 02:07:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-24 02:07:12] c-211-33-2.aglt2.org
[2025-02-24 02:07:12] apptainer works
[2025-02-24 02:07:12] Set ATHENA_PROC_NUMBER=8
[2025-02-24 02:07:12] Set ATHENA_CORE_NUMBER=8
[2025-02-24 02:07:12] Starting ATLAS job with PandaID=6528237604
[2025-02-24 02:07:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
07:40:08 (16404): BOINC client no longer exists - exiting
07:40:08 (16404): timer handler: client dead, exiting
07:49:17 (322505): wrapper (7.7.26015): starting
07:49:17 (322505): wrapper: running run_atlas (--nthreads 8)
[2025-02-24 07:49:17] Arguments: --nthreads 8
[2025-02-24 07:49:17] Threads: 8
[2025-02-24 07:49:17] This job has been restarted, cleaning up previous attempt
[2025-02-24 07:49:17] Checking for CVMFS
[2025-02-24 07:49:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-24 07:49:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-24 07:49:18] Running cvmfs_config stat atlas.cern.ch
[2025-02-24 07:49:19] /usr/bin/cvmfs_config: line 944: cd: /cvmfs/minerva.osgstorage.org: Transport endpoint is not connected
[2025-02-24 07:49:19] 
[2025-02-24 07:49:19] CVMFS is ok
[2025-02-24 07:49:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-24 07:49:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-24 07:49:19] Further information can be found at the LHC@home message board.
[2025-02-24 07:49:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-24 07:49:19] Checking for apptainer binary...
[2025-02-24 07:49:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-24 07:49:19] Running /usr/bin/apptainer --version
[2025-02-24 07:49:19] apptainer version 1.3.2-1.el7
[2025-02-24 07:49:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-24 07:49:30] c-211-33-2.aglt2.org
[2025-02-24 07:49:30] apptainer works
[2025-02-24 07:49:30] Set ATHENA_PROC_NUMBER=8
[2025-02-24 07:49:30] Set ATHENA_CORE_NUMBER=8
[2025-02-24 07:49:30] Starting ATLAS job with PandaID=6528237604
[2025-02-24 07:49:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-24 15:25:48]  *** The last 200 lines of the pilot log: ***
[2025-02-24 15:25:48] 2025-02-24 20:25:27,918 | INFO     | chi2: 9.126741247765372
[2025-02-24 15:25:48] 2025-02-24 20:25:27,918 | INFO     | model: linear, x: [1740401605.0, 1740401666.0, 1740401727.0, 1740401788.0, 1740401849.0, 1740401910.0, 1740401971.0, 1740402032.0, 1740402093.0, 1740402154.0, 1740
[2025-02-24 15:25:48] 2025-02-24 20:25:27,918 | INFO     | sum of square deviations: 26413248001.59083
[2025-02-24 15:25:48] 2025-02-24 20:25:27,920 | INFO     | sum of deviations: 437533585395.0685
[2025-02-24 15:25:48] 2025-02-24 20:25:27,920 | INFO     | mean x: 1740414994.7045455
[2025-02-24 15:25:48] 2025-02-24 20:25:27,921 | INFO     | mean y: 2497225.915909091
[2025-02-24 15:25:48] 2025-02-24 20:25:27,921 | INFO     | -- intersect: -28827354091.97409
[2025-02-24 15:25:48] 2025-02-24 20:25:27,921 | INFO     | intersect: -28827354091.97409
[2025-02-24 15:25:48] 2025-02-24 20:25:27,921 | INFO     | chi2: 8.274564568264266
[2025-02-24 15:25:48] 2025-02-24 20:25:27,921 | INFO     | current chi2=8.274564568264266 (change=9.337140786255516 %)
[2025-02-24 15:25:48] 2025-02-24 20:25:27,921 | INFO     | right removable region: 439
[2025-02-24 15:25:48] 2025-02-24 20:25:27,921 | INFO     | model: linear, x: [1740401910.0, 1740401971.0, 1740402032.0, 1740402093.0, 1740402154.0, 1740402215.0, 1740402276.0, 1740402337.0, 1740402398.0, 1740402459.0, 1740
[2025-02-24 15:25:48] 2025-02-24 20:25:27,921 | INFO     | sum of square deviations: 26413193101.59084
[2025-02-24 15:25:48] 2025-02-24 20:25:27,924 | INFO     | sum of deviations: 266779538784.93158
[2025-02-24 15:25:48] 2025-02-24 20:25:27,924 | INFO     | mean x: 1740415299.7045455
[2025-02-24 15:25:48] 2025-02-24 20:25:27,924 | INFO     | mean y: 2516555.284090909
[2025-02-24 15:25:48] 2025-02-24 20:25:27,924 | INFO     | -- intersect: -17576092330.191868
[2025-02-24 15:25:48] 2025-02-24 20:25:27,924 | INFO     | intersect: -17576092330.191868
[2025-02-24 15:25:48] 2025-02-24 20:25:27,924 | INFO     | chi2: 5.225819518776953
[2025-02-24 15:25:48] 2025-02-24 20:25:27,924 | INFO     | current chi2=5.225819518776953 (change=42.74167112980809 %)
[2025-02-24 15:25:48] 2025-02-24 20:25:27,925 | INFO     | model: linear, x: [1740402215.0, 1740402276.0, 1740402337.0, 1740402398.0, 1740402459.0, 1740402520.0, 1740402581.0, 1740402642.0, 1740402703.0, 1740402764.0, 1740
[2025-02-24 15:25:48] 2025-02-24 20:25:27,925 | INFO     | sum of square deviations: 25522879191.379402
[2025-02-24 15:25:48] 2025-02-24 20:25:27,927 | INFO     | sum of deviations: 160817026315.24182
[2025-02-24 15:25:48] 2025-02-24 20:25:27,927 | INFO     | mean x: 1740415452.2068965
[2025-02-24 15:25:48] 2025-02-24 20:25:27,927 | INFO     | mean y: 2534700.652873563
[2025-02-24 15:25:48] 2025-02-24 20:25:27,927 | INFO     | -- intersect: -10963643349.962395
[2025-02-24 15:25:48] 2025-02-24 20:25:27,927 | INFO     | intersect: -10963643349.962395
[2025-02-24 15:25:48] 2025-02-24 20:25:27,928 | INFO     | chi2: 3.2181937309915583
[2025-02-24 15:25:48] 2025-02-24 20:25:27,928 | INFO     | current chi2=3.2181937309915583 (change=38.41743444395222 %)
[2025-02-24 15:25:48] 2025-02-24 20:25:27,928 | INFO     | model: linear, x: [1740402520.0, 1740402581.0, 1740402642.0, 1740402703.0, 1740402764.0, 1740402825.0, 1740402886.0, 1740402947.0, 1740403008.0, 1740403069.0, 1740
[2025-02-24 15:25:48] 2025-02-24 20:25:27,928 | INFO     | sum of square deviations: 24652798218.662643
[2025-02-24 15:25:48] 2025-02-24 20:25:27,931 | INFO     | sum of deviations: 61187034564.95354
[2025-02-24 15:25:48] 2025-02-24 20:25:27,931 | INFO     | mean x: 1740415604.7093024
[2025-02-24 15:25:48] 2025-02-24 20:25:27,931 | INFO     | mean y: 2552163.111627907
[2025-02-24 15:25:48] 2025-02-24 20:25:27,931 | INFO     | -- intersect: -4317073901.978093
[2025-02-24 15:25:48] 2025-02-24 20:25:27,931 | INFO     | intersect: -4317073901.978093
[2025-02-24 15:25:48] 2025-02-24 20:25:27,931 | INFO     | chi2: 1.466982269046573
[2025-02-24 15:25:48] 2025-02-24 20:25:27,931 | INFO     | current chi2=1.466982269046573 (change=54.415973938443386 %)
[2025-02-24 15:25:48] 2025-02-24 20:25:27,931 | INFO     | model: linear, x: [1740402825.0, 1740402886.0, 1740402947.0, 1740403008.0, 1740403069.0, 1740403130.0, 1740403191.0, 1740403253.0, 1740403313.0, 1740403374.0, 1740
[2025-02-24 15:25:48] 2025-02-24 20:25:27,931 | INFO     | sum of square deviations: 23802717620.941128
[2025-02-24 15:25:48] 2025-02-24 20:25:27,934 | INFO     | sum of deviations: 15762378890.070633
[2025-02-24 15:25:48] 2025-02-24 20:25:27,934 | INFO     | mean x: 1740415757.2117648
[2025-02-24 15:25:48] 2025-02-24 20:25:27,934 | INFO     | mean y: 2560302.865882353
[2025-02-24 15:25:48] 2025-02-24 20:25:27,934 | INFO     | -- intersect: -1149959045.0629425
[2025-02-24 15:25:48] 2025-02-24 20:25:27,934 | INFO     | intersect: -1149959045.0629425
[2025-02-24 15:25:48] 2025-02-24 20:25:27,934 | INFO     | chi2: 1.1018496439645888
[2025-02-24 15:25:48] 2025-02-24 20:25:27,934 | INFO     | current chi2=1.1018496439645888 (change=24.890050328917244 %)
[2025-02-24 15:25:48] 2025-02-24 20:25:27,934 | INFO     | left removable region: 40
[2025-02-24 15:25:48] 2025-02-24 20:25:27,934 | INFO     | model: linear, x: [1740404045.0, 1740404106.0, 1740404167.0, 1740404229.0, 1740404289.0, 1740404350.0, 1740404412.0, 1740404473.0, 1740404534.0, 1740404595.0, 1740
[2025-02-24 15:25:48] 2025-02-24 20:25:27,935 | INFO     | sum of square deviations: 19695999594.55632
[2025-02-24 15:25:48] 2025-02-24 20:25:27,937 | INFO     | sum of deviations: -8370540944.609029
[2025-02-24 15:25:48] 2025-02-24 20:25:27,937 | INFO     | mean x: 1740416184.2030075
[2025-02-24 15:25:48] 2025-02-24 20:25:27,937 | INFO     | mean y: 2576512.6741854637
[2025-02-24 15:25:48] 2025-02-24 20:25:27,937 | INFO     | -- intersect: 742230515.0309851
[2025-02-24 15:25:48] 2025-02-24 20:25:27,937 | INFO     | intersect: 742230515.0309851
[2025-02-24 15:25:48] 2025-02-24 20:25:27,937 | INFO     | chi2: 0.013250689235567218
[2025-02-24 15:25:48] 2025-02-24 20:25:27,937 | INFO     | -- intersect: 742230515.0309851
[2025-02-24 15:25:48] 2025-02-24 20:25:27,937 | INFO     | current memory leak: -0.42 B/s (using 399 data points, chi2=0.01)
[2025-02-24 15:25:48] 2025-02-24 20:25:27,938 | INFO     | ..............................
[2025-02-24 15:25:48] 2025-02-24 20:25:27,938 | INFO     | . Timing measurements:
[2025-02-24 15:25:48] 2025-02-24 20:25:27,938 | INFO     | . get job = 0 s
[2025-02-24 15:25:48] 2025-02-24 20:25:27,938 | INFO     | . initial setup = 5 s
[2025-02-24 15:25:48] 2025-02-24 20:25:27,938 | INFO     | . payload setup = 47 s
[2025-02-24 15:25:48] 2025-02-24 20:25:27,938 | INFO     | . stage-in = 0 s
[2025-02-24 15:25:48] 2025-02-24 20:25:27,938 | INFO     | . payload execution = 27175 s
[2025-02-24 15:25:48] 2025-02-24 20:25:27,938 | INFO     | . stage-out = 2 s
[2025-02-24 15:25:48] 2025-02-24 20:25:27,938 | INFO     | . log creation = 0 s
[2025-02-24 15:25:48] 2025-02-24 20:25:27,938 | INFO     | ..............................
[2025-02-24 15:25:48] 2025-02-24 20:25:28,481 | INFO     | 
[2025-02-24 15:25:48] 2025-02-24 20:25:28,481 | INFO     | job summary report
[2025-02-24 15:25:48] 2025-02-24 20:25:28,481 | INFO     | --------------------------------------------------
[2025-02-24 15:25:48] 2025-02-24 20:25:28,482 | INFO     | PanDA job id: 6528237604
[2025-02-24 15:25:48] 2025-02-24 20:25:28,482 | INFO     | task id: 43205094
[2025-02-24 15:25:48] 2025-02-24 20:25:28,482 | INFO     | errors: (none)
[2025-02-24 15:25:48] 2025-02-24 20:25:28,482 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-24 15:25:48] 2025-02-24 20:25:28,482 | INFO     | pilot state: finished 
[2025-02-24 15:25:48] 2025-02-24 20:25:28,482 | INFO     | transexitcode: 0
[2025-02-24 15:25:48] 2025-02-24 20:25:28,482 | INFO     | exeerrorcode: 0
[2025-02-24 15:25:48] 2025-02-24 20:25:28,482 | INFO     | exeerrordiag: 
[2025-02-24 15:25:48] 2025-02-24 20:25:28,482 | INFO     | exitcode: 0
[2025-02-24 15:25:48] 2025-02-24 20:25:28,482 | INFO     | exitmsg: OK
[2025-02-24 15:25:48] 2025-02-24 20:25:28,482 | INFO     | cpuconsumptiontime: 93906 s
[2025-02-24 15:25:48] 2025-02-24 20:25:28,482 | INFO     | nevents: 400
[2025-02-24 15:25:48] 2025-02-24 20:25:28,482 | INFO     | neventsw: 0
[2025-02-24 15:25:48] 2025-02-24 20:25:28,482 | INFO     | pid: 73594
[2025-02-24 15:25:48] 2025-02-24 20:25:28,482 | INFO     | pgrp: 73594
[2025-02-24 15:25:48] 2025-02-24 20:25:28,482 | INFO     | corecount: 8
[2025-02-24 15:25:48] 2025-02-24 20:25:28,482 | INFO     | event service: False
[2025-02-24 15:25:48] 2025-02-24 20:25:28,482 | INFO     | sizes: {0: 2383134, 1: 2383333, 12: 2383333, 23: 2383361, 32: 2383595, 33: 2383623, 27227: 2420017, 27229: 2428958, 27230: 2429014, 27232: 2429184}
[2025-02-24 15:25:48] 2025-02-24 20:25:28,482 | INFO     | --------------------------------------------------
[2025-02-24 15:25:48] 2025-02-24 20:25:28,482 | INFO     | 
[2025-02-24 15:25:48] 2025-02-24 20:25:28,482 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-02-24 15:25:48] 2025-02-24 20:25:28,498 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-24 15:25:48] 2025-02-24 20:25:28,498 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-24 15:25:48] 2025-02-24 20:25:28,498 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-24 15:25:48] 2025-02-24 20:25:28,498 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-24 15:25:48] 2025-02-24 20:25:28,498 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-24 15:25:48] 2025-02-24 20:25:28,498 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-24 15:25:48] 2025-02-24 20:25:28,498 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-24 15:25:48] 2025-02-24 20:25:28,498 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-24 15:25:48] 2025-02-24 20:25:28,499 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-24 15:25:48] 2025-02-24 20:25:28,499 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-24 15:25:48] 2025-02-24 20:25:28,499 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-24 15:25:48] 2025-02-24 20:25:28,499 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-24 15:25:48] 2025-02-24 20:25:28,499 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-24 15:25:48] 2025-02-24 20:25:28,499 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-24 15:25:48] 2025-02-24 20:25:28,499 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-24 15:25:48] 2025-02-24 20:25:28,499 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-24 15:25:48] 2025-02-24 20:25:28,499 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-24 15:25:48] 2025-02-24 20:25:28,499 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-24 15:25:48] 2025-02-24 20:25:28,499 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-24 15:25:48] 2025-02-24 20:25:28,499 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-24 15:25:48] 2025-02-24 20:25:28,499 | INFO     | job 6528237604 has completed (purged errors)
[2025-02-24 15:25:48] 2025-02-24 20:25:28,499 | INFO     | overall cleanup function is called
[2025-02-24 15:25:48] 2025-02-24 20:25:29,501 | INFO     | --- collectZombieJob: --- 10, [73594]
[2025-02-24 15:25:48] 2025-02-24 20:25:29,502 | INFO     | zombie collector waiting for pid 73594
[2025-02-24 15:25:48] 2025-02-24 20:25:29,502 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-24 15:25:48] 2025-02-24 20:25:29,502 | INFO     | collected zombie processes
[2025-02-24 15:25:48] 2025-02-24 20:25:29,502 | INFO     | will attempt to kill all subprocesses of pid=73594
[2025-02-24 15:25:48] 2025-02-24 20:25:29,626 | INFO     | process IDs to be killed: [73594] (in reverse order)
[2025-02-24 15:25:48] 2025-02-24 20:25:29,713 | WARNING  | found no corresponding commands to process id(s)
[2025-02-24 15:25:48] 2025-02-24 20:25:29,713 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-24 15:25:48] 2025-02-24 20:25:29,719 | INFO     | did not find any defunct processes belonging to 73594
[2025-02-24 15:25:48] 2025-02-24 20:25:29,724 | INFO     | did not find any defunct processes belonging to 73594
[2025-02-24 15:25:48] 2025-02-24 20:25:29,724 | INFO     | ready for new job
[2025-02-24 15:25:48] 2025-02-24 20:25:29,724 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-24 15:25:48] 2025-02-24 20:25:29,727 | INFO     | **************************************
[2025-02-24 15:25:48] 2025-02-24 20:25:29,727 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-24 15:25:48] 2025-02-24 20:25:29,727 | INFO     | **************************************
[2025-02-24 15:25:48] 2025-02-24 20:25:29,727 | INFO     | 
[2025-02-24 15:25:48] 2025-02-24 20:25:29,730 | INFO     | architecture information:
[2025-02-24 15:25:48] 2025-02-24 20:25:29,731 | INFO     | executing command: cat /etc/os-release
[2025-02-24 15:25:48] 2025-02-24 20:25:29,743 | INFO     | cat /etc/os-release:
[2025-02-24 15:25:48] NAME="CentOS Linux"
[2025-02-24 15:25:48] VERSION="7 (Core)"
[2025-02-24 15:25:48] ID="centos"
[2025-02-24 15:25:48] ID_LIKE="rhel fedora"
[2025-02-24 15:25:48] VERSION_ID="7"
[2025-02-24 15:25:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-24 15:25:48] ANSI_COLOR="0;31"
[2025-02-24 15:25:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-24 15:25:48] HOME_URL="https://www.centos.org/"
[2025-02-24 15:25:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-24 15:25:48] 
[2025-02-24 15:25:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-24 15:25:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-24 15:25:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-24 15:25:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-24 15:25:48] 
[2025-02-24 15:25:48] 2025-02-24 20:25:29,743 | INFO     | **************************************
[2025-02-24 15:25:48] 2025-02-24 20:25:30,245 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-02-24 15:25:48] 2025-02-24 20:25:30,261 | INFO     | sufficient remaining disk space (104513667072 B)
[2025-02-24 15:25:48] 2025-02-24 20:25:30,261 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-24 15:25:48] 2025-02-24 20:25:30,261 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-24 15:25:48] 2025-02-24 20:25:30,261 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-24 15:25:48] 2025-02-24 20:25:30,262 | INFO     | found 0 job(s) in 20 queues
[2025-02-24 15:25:48] 2025-02-24 20:25:30,262 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-24 15:25:48] 2025-02-24 20:25:30,262 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-24 15:25:48] 2025-02-24 20:25:30,430 | INFO     | all data control threads have been joined
[2025-02-24 15:25:48] 2025-02-24 20:25:30,475 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-24 15:25:48] 2025-02-24 20:25:30,759 | INFO     | all job control threads have been joined
[2025-02-24 15:25:48] 2025-02-24 20:25:31,071 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-24 15:25:48] 2025-02-24 20:25:31,071 | INFO     | aborting loop
[2025-02-24 15:25:48] 2025-02-24 20:25:31,209 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-24 15:25:48] 2025-02-24 20:25:31,266 | INFO     | [job] retrieve thread has finished
[2025-02-24 15:25:48] 2025-02-24 20:25:31,436 | INFO     | [data] control thread has finished
[2025-02-24 15:25:48] 2025-02-24 20:25:31,446 | INFO     | [payload] failed_post thread has finished
[2025-02-24 15:25:48] 2025-02-24 20:25:31,507 | INFO     | [job] create_data_payload thread has finished
[2025-02-24 15:25:48] 2025-02-24 20:25:31,663 | INFO     | all payload control threads have been joined
[2025-02-24 15:25:48] 2025-02-24 20:25:31,687 | INFO     | [payload] validate_post thread has finished
[2025-02-24 15:25:48] 2025-02-24 20:25:31,764 | INFO     | [job] control thread has finished
[2025-02-24 15:25:48] 2025-02-24 20:25:31,951 | INFO     | [job] validate thread has finished
[2025-02-24 15:25:48] 2025-02-24 20:25:32,049 | INFO     | [data] copytool_in thread has finished
[2025-02-24 15:25:48] 2025-02-24 20:25:32,077 | INFO     | [job] job monitor thread has finished
[2025-02-24 15:25:48] 2025-02-24 20:25:32,286 | INFO     | [payload] validate_pre thread has finished
[2025-02-24 15:25:48] 2025-02-24 20:25:32,481 | INFO     | [data] copytool_out thread has finished
[2025-02-24 15:25:48] 2025-02-24 20:25:32,580 | INFO     | [payload] execute_payloads thread has finished
[2025-02-24 15:25:48] 2025-02-24 20:25:32,668 | INFO     | [payload] control thread has finished
[2025-02-24 15:25:48] 2025-02-24 20:25:33,002 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-24 15:25:48] 2025-02-24 20:25:34,008 | INFO     | [job] queue monitor thread has finished
[2025-02-24 15:25:48] 2025-02-24 20:25:35,215 | INFO     | [data] queue_monitor thread has finished
[2025-02-24 15:25:48] 2025-02-24 20:25:41,180 | INFO     | job.realtimelogging is not enabled
[2025-02-24 15:25:48] 2025-02-24 20:25:42,186 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-24 15:25:48] 2025-02-24 20:25:42,886 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140003165280064)>', '<ExcThread(monitor, started 140002394609408)>']
[2025-02-24 15:25:48] 2025-02-24 20:25:43,336 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-24 15:25:48] 2025-02-24 20:25:43,336 | INFO     | [monitor] control thread has ended
[2025-02-24 15:25:48] 2025-02-24 20:25:47,889 | INFO     | all workflow threads have been joined
[2025-02-24 15:25:48] 2025-02-24 20:25:47,889 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-24 15:25:48] 2025-02-24 20:25:47,890 | INFO     | traces error code: 0
[2025-02-24 15:25:48] 2025-02-24 20:25:47,890 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-24 15:25:48] 2025-02-24 20:25:48,022 [wrapper] ==== pilot stdout END ====
[2025-02-24 15:25:48] 2025-02-24 20:25:48,025 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-24 15:25:48] 2025-02-24 20:25:48,028 [wrapper] pilotpid: 21479
[2025-02-24 15:25:48] 2025-02-24 20:25:48,030 [wrapper] Pilot exit status: 0
[2025-02-24 15:25:48] 2025-02-24 20:25:48,037 [wrapper] pandaids: 6528237604 6528237604
[2025-02-24 15:25:48] 2025-02-24 20:25:48,084 [wrapper] cleanup supervisor_pilot  86855 21480
[2025-02-24 15:25:48] 2025-02-24 20:25:48,086 [wrapper] Test setup, not cleaning
[2025-02-24 15:25:48] 2025-02-24 20:25:48,090 [wrapper] apfmon messages muted
[2025-02-24 15:25:48] 2025-02-24 20:25:48,092 [wrapper] ==== wrapper stdout END ====
[2025-02-24 15:25:48] 2025-02-24 20:25:48,093 [wrapper] ==== wrapper stderr END ====
[2025-02-24 15:25:48]  *** Error codes and diagnostics ***
[2025-02-24 15:25:48]     "exeErrorCode": 0,
[2025-02-24 15:25:48]     "exeErrorDiag": "",
[2025-02-24 15:25:48]     "pilotErrorCode": 0,
[2025-02-24 15:25:48]     "pilotErrorDiag": "",
[2025-02-24 15:25:48]  *** Listing of results directory ***
[2025-02-24 15:25:48] total 1010100
[2025-02-24 15:25:48] drwx------ 4 boincer umatlas      4096 Dec 18 06:03 pilot3
[2025-02-24 15:25:48] -rw-r--r-- 1 boincer umatlas    491065 Feb 24 01:56 pilot3.tar.gz
[2025-02-24 15:25:48] -rw-r--r-- 1 boincer umatlas      5118 Feb 24 02:06 queuedata.json
[2025-02-24 15:25:48] -rwx------ 1 boincer umatlas     35865 Feb 24 02:06 runpilot2-wrapper.sh
[2025-02-24 15:25:48] -rw-r--r-- 1 boincer umatlas       100 Feb 24 02:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-24 15:25:48] -rwxr-xr-x 1 boincer umatlas      7986 Feb 24 02:07 run_atlas
[2025-02-24 15:25:48] -rw-r--r-- 1 boincer umatlas       105 Feb 24 02:07 job.xml
[2025-02-24 15:25:48] -rw-r--r-- 3 boincer umatlas 347197682 Feb 24 02:07 EVNT.43092757._001986.pool.root.1
[2025-02-24 15:25:48] -rw-r--r-- 3 boincer umatlas 347197682 Feb 24 02:07 ATLAS.root_0
[2025-02-24 15:25:48] -rw-r--r-- 2 boincer umatlas    503558 Feb 24 02:07 input.tar.gz
[2025-02-24 15:25:48] -rw-r--r-- 2 boincer umatlas     17569 Feb 24 02:07 start_atlas.sh
[2025-02-24 15:25:48] drwxrwx--x 2 boincer umatlas      4096 Feb 24 02:07 shared
[2025-02-24 15:25:48] -rw-r--r-- 1 boincer umatlas         0 Feb 24 02:07 boinc_lockfile
[2025-02-24 15:25:48] -rw-r--r-- 1 boincer umatlas      2546 Feb 24 07:49 pandaJob.out
[2025-02-24 15:25:48] -rw------- 1 boincer umatlas       424 Feb 24 07:49 setup.sh.local
[2025-02-24 15:25:48] -rw------- 1 boincer umatlas    987749 Feb 24 07:50 agis_schedconf.cvmfs.json
[2025-02-24 15:25:48] -rw-r--r-- 1 boincer umatlas      6302 Feb 24 15:18 init_data.xml
[2025-02-24 15:25:48] -rw-r--r-- 1 boincer umatlas       533 Feb 24 15:24 boinc_task_state.xml
[2025-02-24 15:25:48] -rw------- 1 boincer umatlas 328040310 Feb 24 15:24 HITS.43205094._040279.pool.root.1
[2025-02-24 15:25:48] -rw------- 1 boincer umatlas        96 Feb 24 15:25 pilot_heartbeat.json
[2025-02-24 15:25:48] -rw------- 1 boincer umatlas      1064 Feb 24 15:25 memory_monitor_summary.json
[2025-02-24 15:25:48] -rw------- 1 boincer umatlas   1582569 Feb 24 15:25 agis_ddmendpoints.agis.ALL.json
[2025-02-24 15:25:48] -rw------- 1 boincer umatlas    555464 Feb 24 15:25 log.43205094._040279.job.log.tgz.1
[2025-02-24 15:25:48] -rw------- 1 boincer umatlas      7778 Feb 24 15:25 heartbeat.json
[2025-02-24 15:25:48] -rw-r--r-- 1 boincer umatlas      8192 Feb 24 15:25 boinc_mmap_file
[2025-02-24 15:25:48] -rw-r--r-- 1 boincer umatlas        29 Feb 24 15:25 wrapper_checkpoint.txt
[2025-02-24 15:25:48] -rw------- 1 boincer umatlas      4411 Feb 24 15:25 pilotlog.txt
[2025-02-24 15:25:48] -rw------- 1 boincer umatlas   3489649 Feb 24 15:25 log.43205094._040279.job.log.1
[2025-02-24 15:25:48] -rw------- 1 boincer umatlas       357 Feb 24 15:25 output.list
[2025-02-24 15:25:48] -rw-r--r-- 1 boincer umatlas       620 Feb 24 15:25 runtime_log
[2025-02-24 15:25:48] -rw------- 1 boincer umatlas   4065280 Feb 24 15:25 result.tar.gz
[2025-02-24 15:25:48] -rw-r--r-- 1 boincer umatlas     11109 Feb 24 15:25 runtime_log.err
[2025-02-24 15:25:48] -rw------- 1 boincer umatlas       788 Feb 24 15:25 L6IKDmrih66nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmuwvKDmJLRE3n.diag
[2025-02-24 15:25:48] -rw-r--r-- 1 boincer umatlas     23418 Feb 24 15:25 stderr.txt
[2025-02-24 15:25:48] HITS file was successfully produced:
[2025-02-24 15:25:48] -rw------- 1 boincer umatlas 328040310 Feb 24 15:24 shared/HITS.pool.root.1
[2025-02-24 15:25:48]  *** Contents of shared directory: ***
[2025-02-24 15:25:48] total 663908
[2025-02-24 15:25:48] -rw-r--r-- 3 boincer umatlas 347197682 Feb 24 02:07 ATLAS.root_0
[2025-02-24 15:25:48] -rw-r--r-- 2 boincer umatlas    503558 Feb 24 02:07 input.tar.gz
[2025-02-24 15:25:48] -rw-r--r-- 2 boincer umatlas     17569 Feb 24 02:07 start_atlas.sh
[2025-02-24 15:25:48] -rw------- 1 boincer umatlas 328040310 Feb 24 15:24 HITS.pool.root.1
[2025-02-24 15:25:48] -rw------- 1 boincer umatlas   4065280 Feb 24 15:25 result.tar.gz
15:25:49 (322505): run_atlas exited; CPU time 93831.638244
15:25:49 (322505): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN