Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:58:36 (4024604): wrapper (7.7.26015): starting
01:58:36 (4024604): wrapper: running run_atlas (--nthreads 10)
[2025-02-24 01:58:36] Arguments: --nthreads 10
[2025-02-24 01:58:36] Threads: 10
[2025-02-24 01:58:36] Checking for CVMFS
[2025-02-24 01:58:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-24 01:58:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-24 01:58:38] Running cvmfs_config stat atlas.cern.ch
[2025-02-24 01:58:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-24 01:58:40] 2.11.5.0 1587938 97477 201340 143001 3 168 21742483 37641217 13684 130560 0 3117802 99.136 7166279 29233 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-02-24 01:58:40] CVMFS is ok
[2025-02-24 01:58:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-24 01:58:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-24 01:58:40] Further information can be found at the LHC@home message board.
[2025-02-24 01:58:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-24 01:58:40] Checking for apptainer binary...
[2025-02-24 01:58:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-24 01:58:40] Running /usr/bin/apptainer --version
[2025-02-24 01:58:41] apptainer version 1.3.6-1.el9
[2025-02-24 01:58:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-24 01:58:42] c-4-39.aglt2.org
[2025-02-24 01:58:42] apptainer works
[2025-02-24 01:58:43] Set ATHENA_PROC_NUMBER=10
[2025-02-24 01:58:43] Set ATHENA_CORE_NUMBER=10
[2025-02-24 01:58:43] Starting ATLAS job with PandaID=6522146841
[2025-02-24 01:58:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-24 15:05:39]  *** The last 200 lines of the pilot log: ***
[2025-02-24 15:05:39] 2025-02-24 20:05:20,673 | INFO     | -- intersect: -9052717865.980152
[2025-02-24 15:05:39] 2025-02-24 20:05:20,673 | INFO     | intersect: -9052717865.980152
[2025-02-24 15:05:39] 2025-02-24 20:05:20,674 | INFO     | chi2: 8.550608936971148
[2025-02-24 15:05:39] 2025-02-24 20:05:20,675 | INFO     | model: linear, x: [1740380539.0, 1740380600.0, 1740380661.0, 1740380722.0, 1740380783.0, 1740380844.0, 1740380906.0, 1740380966.0, 1740381028.0, 1740381089.0, 1740
[2025-02-24 15:05:39] 2025-02-24 20:05:20,676 | INFO     | sum of square deviations: 138818091950.48877
[2025-02-24 15:05:39] 2025-02-24 20:05:20,710 | INFO     | sum of deviations: 838382430859.1343
[2025-02-24 15:05:39] 2025-02-24 20:05:20,711 | INFO     | mean x: 1740403841.8444445
[2025-02-24 15:05:39] 2025-02-24 20:05:20,711 | INFO     | mean y: 2494391.925490196
[2025-02-24 15:05:39] 2025-02-24 20:05:20,711 | INFO     | -- intersect: -10508556315.517866
[2025-02-24 15:05:39] 2025-02-24 20:05:20,711 | INFO     | intersect: -10508556315.517866
[2025-02-24 15:05:39] 2025-02-24 20:05:20,717 | INFO     | chi2: 7.019337188195262
[2025-02-24 15:05:39] 2025-02-24 20:05:20,717 | INFO     | current chi2=7.019337188195262 (change=17.908335652621986 %)
[2025-02-24 15:05:39] 2025-02-24 20:05:20,717 | INFO     | right removable region: 764
[2025-02-24 15:05:39] 2025-02-24 20:05:20,718 | INFO     | model: linear, x: [1740380844.0, 1740380906.0, 1740380966.0, 1740381028.0, 1740381089.0, 1740381150.0, 1740381210.0, 1740381271.0, 1740381332.0, 1740381394.0, 1740
[2025-02-24 15:05:39] 2025-02-24 20:05:20,723 | INFO     | sum of square deviations: 138817697890.4888
[2025-02-24 15:05:39] 2025-02-24 20:05:20,756 | INFO     | sum of deviations: 525417755399.66724
[2025-02-24 15:05:39] 2025-02-24 20:05:20,756 | INFO     | mean x: 1740404146.8444445
[2025-02-24 15:05:39] 2025-02-24 20:05:20,757 | INFO     | mean y: 2500486.274509804
[2025-02-24 15:05:39] 2025-02-24 20:05:20,757 | INFO     | -- intersect: -6584838550.601525
[2025-02-24 15:05:39] 2025-02-24 20:05:20,757 | INFO     | intersect: -6584838550.601525
[2025-02-24 15:05:39] 2025-02-24 20:05:20,758 | INFO     | chi2: 5.74533727605392
[2025-02-24 15:05:39] 2025-02-24 20:05:20,758 | INFO     | current chi2=5.74533727605392 (change=32.80785826595093 %)
[2025-02-24 15:05:39] 2025-02-24 20:05:20,763 | INFO     | model: linear, x: [1740381150.0, 1740381210.0, 1740381271.0, 1740381332.0, 1740381394.0, 1740381455.0, 1740381516.0, 1740381576.0, 1740381637.0, 1740381699.0, 1740
[2025-02-24 15:05:39] 2025-02-24 20:05:20,764 | INFO     | sum of square deviations: 136113366649.98822
[2025-02-24 15:05:39] 2025-02-24 20:05:20,804 | INFO     | sum of deviations: 351339150720.1602
[2025-02-24 15:05:39] 2025-02-24 20:05:20,804 | INFO     | mean x: 1740404299.3460526
[2025-02-24 15:05:39] 2025-02-24 20:05:20,804 | INFO     | mean y: 2510301.0868421053
[2025-02-24 15:05:39] 2025-02-24 20:05:20,804 | INFO     | -- intersect: -4489863838.877982
[2025-02-24 15:05:39] 2025-02-24 20:05:20,804 | INFO     | intersect: -4489863838.877982
[2025-02-24 15:05:39] 2025-02-24 20:05:20,805 | INFO     | chi2: 3.9629570735953212
[2025-02-24 15:05:39] 2025-02-24 20:05:20,806 | INFO     | current chi2=3.9629570735953212 (change=31.02307343882854 %)
[2025-02-24 15:05:39] 2025-02-24 20:05:20,812 | INFO     | model: linear, x: [1740381455.0, 1740381516.0, 1740381576.0, 1740381637.0, 1740381699.0, 1740381759.0, 1740381821.0, 1740381882.0, 1740381942.0, 1740382003.0, 1740
[2025-02-24 15:05:39] 2025-02-24 20:05:20,813 | INFO     | sum of square deviations: 133444338792.78522
[2025-02-24 15:05:39] 2025-02-24 20:05:20,897 | INFO     | sum of deviations: 194017213390.7151
[2025-02-24 15:05:39] 2025-02-24 20:05:20,897 | INFO     | mean x: 1740404451.8490067
[2025-02-24 15:05:39] 2025-02-24 20:05:20,897 | INFO     | mean y: 2519286.953642384
[2025-02-24 15:05:39] 2025-02-24 20:05:20,897 | INFO     | -- intersect: -2527887210.431585
[2025-02-24 15:05:39] 2025-02-24 20:05:20,897 | INFO     | intersect: -2527887210.431585
[2025-02-24 15:05:39] 2025-02-24 20:05:20,905 | INFO     | chi2: 2.4825317979269297
[2025-02-24 15:05:39] 2025-02-24 20:05:20,905 | INFO     | current chi2=2.4825317979269297 (change=37.35658116340136 %)
[2025-02-24 15:05:39] 2025-02-24 20:05:20,906 | INFO     | model: linear, x: [1740381759.0, 1740381821.0, 1740381882.0, 1740381942.0, 1740382003.0, 1740382064.0, 1740382125.0, 1740382187.0, 1740382248.0, 1740382308.0, 1740
[2025-02-24 15:05:39] 2025-02-24 20:05:20,906 | INFO     | sum of square deviations: 130810474050.77457
[2025-02-24 15:05:39] 2025-02-24 20:05:20,924 | INFO     | sum of deviations: 117202471035.90515
[2025-02-24 15:05:39] 2025-02-24 20:05:20,924 | INFO     | mean x: 1740404604.3506668
[2025-02-24 15:05:39] 2025-02-24 20:05:20,924 | INFO     | mean y: 2523730.2893333333
[2025-02-24 15:05:39] 2025-02-24 20:05:20,925 | INFO     | -- intersect: -1556829385.06586
[2025-02-24 15:05:39] 2025-02-24 20:05:20,925 | INFO     | intersect: -1556829385.06586
[2025-02-24 15:05:39] 2025-02-24 20:05:20,926 | INFO     | chi2: 2.1301789012883603
[2025-02-24 15:05:39] 2025-02-24 20:05:20,926 | INFO     | current chi2=2.1301789012883603 (change=14.193288357184638 %)
[2025-02-24 15:05:39] 2025-02-24 20:05:20,926 | INFO     | left removable region: 40
[2025-02-24 15:05:39] 2025-02-24 20:05:20,927 | INFO     | model: linear, x: [1740382979.0, 1740383043.0, 1740383103.0, 1740383162.0, 1740383223.0, 1740383286.0, 1740383346.0, 1740383408.0, 1740383470.0, 1740383529.0, 1740
[2025-02-24 15:05:39] 2025-02-24 20:05:20,928 | INFO     | sum of square deviations: 117671846991.18774
[2025-02-24 15:05:39] 2025-02-24 20:05:20,943 | INFO     | sum of deviations: 97208312130.44205
[2025-02-24 15:05:39] 2025-02-24 20:05:20,944 | INFO     | mean x: 1740405031.3618784
[2025-02-24 15:05:39] 2025-02-24 20:05:20,944 | INFO     | mean y: 2537192.7044198895
[2025-02-24 15:05:39] 2025-02-24 20:05:20,944 | INFO     | -- intersect: -1435205477.6786416
[2025-02-24 15:05:39] 2025-02-24 20:05:20,944 | INFO     | intersect: -1435205477.6786416
[2025-02-24 15:05:39] 2025-02-24 20:05:20,945 | INFO     | chi2: 0.25910940427775514
[2025-02-24 15:05:39] 2025-02-24 20:05:20,945 | INFO     | -- intersect: -1435205477.6786416
[2025-02-24 15:05:39] 2025-02-24 20:05:20,946 | INFO     | current memory leak: 0.83 B/s (using 724 data points, chi2=0.26)
[2025-02-24 15:05:39] 2025-02-24 20:05:20,947 | INFO     | ..............................
[2025-02-24 15:05:39] 2025-02-24 20:05:20,947 | INFO     | . Timing measurements:
[2025-02-24 15:05:39] 2025-02-24 20:05:20,947 | INFO     | . get job = 0 s
[2025-02-24 15:05:39] 2025-02-24 20:05:20,947 | INFO     | . initial setup = 17 s
[2025-02-24 15:05:39] 2025-02-24 20:05:20,947 | INFO     | . payload setup = 33 s
[2025-02-24 15:05:39] 2025-02-24 20:05:20,947 | INFO     | . stage-in = 0 s
[2025-02-24 15:05:39] 2025-02-24 20:05:20,947 | INFO     | . payload execution = 46942 s
[2025-02-24 15:05:39] 2025-02-24 20:05:20,948 | INFO     | . stage-out = 5 s
[2025-02-24 15:05:39] 2025-02-24 20:05:20,948 | INFO     | . log creation = 1 s
[2025-02-24 15:05:39] 2025-02-24 20:05:20,948 | INFO     | ..............................
[2025-02-24 15:05:39] 2025-02-24 20:05:22,121 | INFO     | 
[2025-02-24 15:05:39] 2025-02-24 20:05:22,122 | INFO     | job summary report
[2025-02-24 15:05:39] 2025-02-24 20:05:22,122 | INFO     | --------------------------------------------------
[2025-02-24 15:05:39] 2025-02-24 20:05:22,122 | INFO     | PanDA job id: 6522146841
[2025-02-24 15:05:39] 2025-02-24 20:05:22,122 | INFO     | task id: 43078919
[2025-02-24 15:05:39] 2025-02-24 20:05:22,122 | INFO     | errors: (none)
[2025-02-24 15:05:39] 2025-02-24 20:05:22,122 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-24 15:05:39] 2025-02-24 20:05:22,122 | INFO     | pilot state: finished 
[2025-02-24 15:05:39] 2025-02-24 20:05:22,123 | INFO     | transexitcode: 0
[2025-02-24 15:05:39] 2025-02-24 20:05:22,123 | INFO     | exeerrorcode: 0
[2025-02-24 15:05:39] 2025-02-24 20:05:22,123 | INFO     | exeerrordiag: 
[2025-02-24 15:05:39] 2025-02-24 20:05:22,123 | INFO     | exitcode: 0
[2025-02-24 15:05:39] 2025-02-24 20:05:22,123 | INFO     | exitmsg: OK
[2025-02-24 15:05:39] 2025-02-24 20:05:22,123 | INFO     | cpuconsumptiontime: 110074 s
[2025-02-24 15:05:39] 2025-02-24 20:05:22,123 | INFO     | nevents: 400
[2025-02-24 15:05:39] 2025-02-24 20:05:22,123 | INFO     | neventsw: 0
[2025-02-24 15:05:39] 2025-02-24 20:05:22,123 | INFO     | pid: 4054544
[2025-02-24 15:05:39] 2025-02-24 20:05:22,123 | INFO     | pgrp: 4054544
[2025-02-24 15:05:39] 2025-02-24 20:05:22,124 | INFO     | corecount: 10
[2025-02-24 15:05:39] 2025-02-24 20:05:22,124 | INFO     | event service: False
[2025-02-24 15:05:39] 2025-02-24 20:05:22,124 | INFO     | sizes: {0: 2382433, 2: 2383118, 3: 2383118, 4: 2383345, 15: 2383345, 27: 2383373, 38: 2383529, 47: 2383763, 50: 2383819, 46980: 2428128, 46986: 2437069, 46989: 243
[2025-02-24 15:05:39] 2025-02-24 20:05:22,124 | INFO     | --------------------------------------------------
[2025-02-24 15:05:39] 2025-02-24 20:05:22,124 | INFO     | 
[2025-02-24 15:05:39] 2025-02-24 20:05:22,124 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-02-24 15:05:39] 2025-02-24 20:05:22,326 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-24 15:05:39] 2025-02-24 20:05:22,327 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-24 15:05:39] 2025-02-24 20:05:22,327 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-24 15:05:39] 2025-02-24 20:05:22,327 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-24 15:05:39] 2025-02-24 20:05:22,327 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-24 15:05:39] 2025-02-24 20:05:22,327 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-24 15:05:39] 2025-02-24 20:05:22,327 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-24 15:05:39] 2025-02-24 20:05:22,327 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-24 15:05:39] 2025-02-24 20:05:22,328 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-24 15:05:39] 2025-02-24 20:05:22,328 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-24 15:05:39] 2025-02-24 20:05:22,328 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-24 15:05:39] 2025-02-24 20:05:22,328 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-24 15:05:39] 2025-02-24 20:05:22,328 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-24 15:05:39] 2025-02-24 20:05:22,328 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-24 15:05:39] 2025-02-24 20:05:22,328 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-24 15:05:39] 2025-02-24 20:05:22,328 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-24 15:05:39] 2025-02-24 20:05:22,328 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-24 15:05:39] 2025-02-24 20:05:22,329 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-24 15:05:39] 2025-02-24 20:05:22,329 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-24 15:05:39] 2025-02-24 20:05:22,329 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-24 15:05:39] 2025-02-24 20:05:22,329 | INFO     | job 6522146841 has completed (purged errors)
[2025-02-24 15:05:39] 2025-02-24 20:05:22,329 | INFO     | overall cleanup function is called
[2025-02-24 15:05:39] 2025-02-24 20:05:23,340 | INFO     | --- collectZombieJob: --- 10, [4054544]
[2025-02-24 15:05:39] 2025-02-24 20:05:23,341 | INFO     | zombie collector waiting for pid 4054544
[2025-02-24 15:05:39] 2025-02-24 20:05:23,341 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-24 15:05:39] 2025-02-24 20:05:23,341 | INFO     | collected zombie processes
[2025-02-24 15:05:39] 2025-02-24 20:05:23,341 | INFO     | will attempt to kill all subprocesses of pid=4054544
[2025-02-24 15:05:39] 2025-02-24 20:05:23,782 | INFO     | process IDs to be killed: [4054544] (in reverse order)
[2025-02-24 15:05:39] 2025-02-24 20:05:24,059 | WARNING  | found no corresponding commands to process id(s)
[2025-02-24 15:05:39] 2025-02-24 20:05:24,060 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-24 15:05:39] 2025-02-24 20:05:24,102 | INFO     | did not find any defunct processes belonging to 4054544
[2025-02-24 15:05:39] 2025-02-24 20:05:24,161 | INFO     | did not find any defunct processes belonging to 4054544
[2025-02-24 15:05:39] 2025-02-24 20:05:24,162 | INFO     | ready for new job
[2025-02-24 15:05:39] 2025-02-24 20:05:24,162 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-24 15:05:39] 2025-02-24 20:05:24,189 | INFO     | **************************************
[2025-02-24 15:05:39] 2025-02-24 20:05:24,190 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-24 15:05:39] 2025-02-24 20:05:24,190 | INFO     | **************************************
[2025-02-24 15:05:39] 2025-02-24 20:05:24,190 | INFO     | 
[2025-02-24 15:05:39] 2025-02-24 20:05:24,192 | INFO     | architecture information:
[2025-02-24 15:05:39] 2025-02-24 20:05:24,211 | INFO     | executing command: cat /etc/os-release
[2025-02-24 15:05:39] 2025-02-24 20:05:24,262 | INFO     | cat /etc/os-release:
[2025-02-24 15:05:39] NAME="CentOS Linux"
[2025-02-24 15:05:39] VERSION="7 (Core)"
[2025-02-24 15:05:39] ID="centos"
[2025-02-24 15:05:39] ID_LIKE="rhel fedora"
[2025-02-24 15:05:39] VERSION_ID="7"
[2025-02-24 15:05:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-24 15:05:39] ANSI_COLOR="0;31"
[2025-02-24 15:05:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-24 15:05:39] HOME_URL="https://www.centos.org/"
[2025-02-24 15:05:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-24 15:05:39] 
[2025-02-24 15:05:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-24 15:05:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-24 15:05:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-24 15:05:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-24 15:05:39] 
[2025-02-24 15:05:39] 2025-02-24 20:05:24,263 | INFO     | **************************************
[2025-02-24 15:05:39] 2025-02-24 20:05:24,784 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-02-24 15:05:39] 2025-02-24 20:05:24,881 | INFO     | sufficient remaining disk space (75248959488 B)
[2025-02-24 15:05:39] 2025-02-24 20:05:24,882 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-24 15:05:39] 2025-02-24 20:05:24,882 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-24 15:05:39] 2025-02-24 20:05:25,132 | INFO     | all job control threads have been joined
[2025-02-24 15:05:39] 2025-02-24 20:05:25,375 | INFO     | found 0 job(s) in 20 queues
[2025-02-24 15:05:39] 2025-02-24 20:05:25,375 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-24 15:05:39] 2025-02-24 20:05:25,375 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-24 15:05:39] 2025-02-24 20:05:25,888 | INFO     | [job] retrieve thread has finished
[2025-02-24 15:05:39] 2025-02-24 20:05:25,893 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-24 15:05:39] 2025-02-24 20:05:25,894 | INFO     | aborting loop
[2025-02-24 15:05:39] 2025-02-24 20:05:26,023 | INFO     | [payload] execute_payloads thread has finished
[2025-02-24 15:05:39] 2025-02-24 20:05:26,049 | INFO     | all data control threads have been joined
[2025-02-24 15:05:39] 2025-02-24 20:05:26,161 | INFO     | [job] control thread has finished
[2025-02-24 15:05:39] 2025-02-24 20:05:26,190 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-24 15:05:39] 2025-02-24 20:05:26,208 | INFO     | all payload control threads have been joined
[2025-02-24 15:05:39] 2025-02-24 20:05:26,276 | INFO     | [data] copytool_in thread has finished
[2025-02-24 15:05:39] 2025-02-24 20:05:26,562 | INFO     | [payload] validate_post thread has finished
[2025-02-24 15:05:39] 2025-02-24 20:05:26,567 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-24 15:05:39] 2025-02-24 20:05:26,674 | INFO     | [payload] validate_pre thread has finished
[2025-02-24 15:05:39] 2025-02-24 20:05:26,695 | INFO     | [job] validate thread has finished
[2025-02-24 15:05:39] 2025-02-24 20:05:26,736 | INFO     | [payload] failed_post thread has finished
[2025-02-24 15:05:39] 2025-02-24 20:05:26,830 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-24 15:05:39] 2025-02-24 20:05:26,851 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-24 15:05:39] 2025-02-24 20:05:26,919 | INFO     | [job] job monitor thread has finished
[2025-02-24 15:05:39] 2025-02-24 20:05:27,054 | INFO     | [job] create_data_payload thread has finished
[2025-02-24 15:05:39] 2025-02-24 20:05:27,055 | INFO     | [data] control thread has finished
[2025-02-24 15:05:39] 2025-02-24 20:05:27,214 | INFO     | [payload] control thread has finished
[2025-02-24 15:05:39] 2025-02-24 20:05:27,836 | INFO     | [job] queue monitor thread has finished
[2025-02-24 15:05:39] 2025-02-24 20:05:28,198 | INFO     | [data] copytool_out thread has finished
[2025-02-24 15:05:39] 2025-02-24 20:05:30,587 | INFO     | [data] queue_monitor thread has finished
[2025-02-24 15:05:39] 2025-02-24 20:05:31,746 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139723511736128)>', '<ExcThread(monitor, started 139722777151232)>']
[2025-02-24 15:05:39] 2025-02-24 20:05:32,428 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-24 15:05:39] 2025-02-24 20:05:32,429 | INFO     | [monitor] control thread has ended
[2025-02-24 15:05:39] 2025-02-24 20:05:36,772 | INFO     | all workflow threads have been joined
[2025-02-24 15:05:39] 2025-02-24 20:05:36,773 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-24 15:05:39] 2025-02-24 20:05:36,773 | INFO     | traces error code: 0
[2025-02-24 15:05:39] 2025-02-24 20:05:36,773 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-24 15:05:39] 2025-02-24 20:05:37,320 [wrapper] ==== pilot stdout END ====
[2025-02-24 15:05:39] 2025-02-24 20:05:37,363 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-24 15:05:39] 2025-02-24 20:05:37,397 [wrapper] pilotpid: 4036711
[2025-02-24 15:05:39] 2025-02-24 20:05:37,427 [wrapper] Pilot exit status: 0
[2025-02-24 15:05:39] 2025-02-24 20:05:37,696 [wrapper] pandaids: 6522146841
[2025-02-24 15:05:39] 2025-02-24 20:05:37,937 [wrapper] cleanup supervisor_pilot 3781959 4036712
[2025-02-24 15:05:39] 2025-02-24 20:05:38,012 [wrapper] Test setup, not cleaning
[2025-02-24 15:05:39] 2025-02-24 20:05:38,088 [wrapper] apfmon messages muted
[2025-02-24 15:05:39] 2025-02-24 20:05:38,174 [wrapper] ==== wrapper stdout END ====
[2025-02-24 15:05:39] 2025-02-24 20:05:38,205 [wrapper] ==== wrapper stderr END ====
[2025-02-24 15:05:39]  *** Error codes and diagnostics ***
[2025-02-24 15:05:39]     "exeErrorCode": 0,
[2025-02-24 15:05:39]     "exeErrorDiag": "",
[2025-02-24 15:05:39]     "pilotErrorCode": 0,
[2025-02-24 15:05:39]     "pilotErrorDiag": "",
[2025-02-24 15:05:39]  *** Listing of results directory ***
[2025-02-24 15:05:39] total 667300
[2025-02-24 15:05:39] -rwx------. 1 boincer umatlas     35865 Feb 21 06:35 runpilot2-wrapper.sh
[2025-02-24 15:05:39] -rw-r--r--. 1 boincer umatlas      5118 Feb 21 06:35 queuedata.json
[2025-02-24 15:05:39] -rw-r--r--. 1 boincer umatlas    491065 Feb 21 06:35 pilot3.tar.gz
[2025-02-24 15:05:39] -rw-r--r--. 1 boincer umatlas       100 Feb 24 01:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-24 15:05:39] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 24 01:58 run_atlas
[2025-02-24 15:05:39] -rw-r--r--. 1 boincer umatlas       105 Feb 24 01:58 job.xml
[2025-02-24 15:05:39] -rw-r--r--. 2 boincer umatlas 341354874 Feb 24 01:58 EVNT.43078917._001810.pool.root.1
[2025-02-24 15:05:39] -rw-r--r--. 2 boincer umatlas     17569 Feb 24 01:58 start_atlas.sh
[2025-02-24 15:05:39] drwxrwx--x. 2 boincer umatlas      4096 Feb 24 01:58 shared
[2025-02-24 15:05:39] -rw-r--r--. 2 boincer umatlas    503555 Feb 24 01:58 input.tar.gz
[2025-02-24 15:05:39] -rw-r--r--. 1 boincer umatlas         0 Feb 24 01:58 boinc_lockfile
[2025-02-24 15:05:39] -rw-r--r--. 1 boincer umatlas      2546 Feb 24 01:58 pandaJob.out
[2025-02-24 15:05:39] -rw-------. 1 boincer umatlas       467 Feb 24 01:58 setup.sh.local
[2025-02-24 15:05:39] -rw-------. 1 boincer umatlas    987720 Feb 24 01:59 agis_schedconf.cvmfs.json
[2025-02-24 15:05:39] drwx------. 4 boincer umatlas      4096 Feb 24 02:00 pilot3
[2025-02-24 15:05:39] -rw-r--r--. 1 boincer umatlas      6676 Feb 24 15:02 init_data.xml
[2025-02-24 15:05:39] -rw-------. 1 boincer umatlas 325136101 Feb 24 15:03 HITS.43078919._082868.pool.root.1
[2025-02-24 15:05:39] -rw-r--r--. 1 boincer umatlas       533 Feb 24 15:03 boinc_task_state.xml
[2025-02-24 15:05:39] -rw-------. 1 boincer umatlas      1051 Feb 24 15:04 memory_monitor_summary.json
[2025-02-24 15:05:39] -rw-------. 1 boincer umatlas   1582569 Feb 24 15:04 agis_ddmendpoints.agis.ALL.json
[2025-02-24 15:05:39] -rw-------. 1 boincer umatlas    821955 Feb 24 15:04 log.43078919._082868.job.log.tgz.1
[2025-02-24 15:05:39] -rw-------. 1 boincer umatlas        95 Feb 24 15:04 pilot_heartbeat.json
[2025-02-24 15:05:39] -rw-------. 1 boincer umatlas      7754 Feb 24 15:05 heartbeat.json
[2025-02-24 15:05:39] -rw-r--r--. 1 boincer umatlas      8192 Feb 24 15:05 boinc_mmap_file
[2025-02-24 15:05:39] -rw-r--r--. 1 boincer umatlas        29 Feb 24 15:05 wrapper_checkpoint.txt
[2025-02-24 15:05:39] -rw-------. 1 boincer umatlas      4215 Feb 24 15:05 pilotlog.txt
[2025-02-24 15:05:39] -rw-------. 1 boincer umatlas   5688291 Feb 24 15:05 log.43078919._082868.job.log.1
[2025-02-24 15:05:39] -rw-------. 1 boincer umatlas       357 Feb 24 15:05 output.list
[2025-02-24 15:05:39] -rw-r--r--. 1 boincer umatlas       620 Feb 24 15:05 runtime_log
[2025-02-24 15:05:39] -rw-------. 1 boincer umatlas   6533120 Feb 24 15:05 result.tar.gz
[2025-02-24 15:05:39] -rw-r--r--. 1 boincer umatlas     11411 Feb 24 15:05 runtime_log.err
[2025-02-24 15:05:39] -rw-------. 1 boincer umatlas       662 Feb 24 15:05 fseMDmkUg56nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm1CsKDmpiTaIo.diag
[2025-02-24 15:05:39] -rw-r--r--. 1 boincer umatlas     21639 Feb 24 15:05 stderr.txt
[2025-02-24 15:05:39] HITS file was successfully produced:
[2025-02-24 15:05:39] -rw-------. 1 boincer umatlas 325136101 Feb 24 15:03 shared/HITS.pool.root.1
[2025-02-24 15:05:39]  *** Contents of shared directory: ***
[2025-02-24 15:05:39] total 657768
[2025-02-24 15:05:39] -rw-r--r--. 2 boincer umatlas 341354874 Feb 24 01:58 ATLAS.root_0
[2025-02-24 15:05:39] -rw-r--r--. 2 boincer umatlas     17569 Feb 24 01:58 start_atlas.sh
[2025-02-24 15:05:39] -rw-r--r--. 2 boincer umatlas    503555 Feb 24 01:58 input.tar.gz
[2025-02-24 15:05:39] -rw-------. 1 boincer umatlas 325136101 Feb 24 15:03 HITS.pool.root.1
[2025-02-24 15:05:39] -rw-------. 1 boincer umatlas   6533120 Feb 24 15:05 result.tar.gz
15:05:40 (4024604): run_atlas exited; CPU time 110249.220281
15:05:40 (4024604): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN