Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-24 15:20:48 (5044): Detected: vboxwrapper 26206
2025-02-24 15:20:48 (5044): Detected: BOINC client v8.0.2
2025-02-24 15:20:48 (5044): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-02-24 15:20:49 (5044): Successfully copied 'init_data.xml' to the shared directory.
2025-02-24 15:20:49 (5044): Create VM. (boinc_47c0272cd5d12923, slot#0)
2025-02-24 15:20:50 (5044): Setting Memory Size for VM. (5900MB)
2025-02-24 15:20:50 (5044): Setting CPU Count for VM. (3)
2025-02-24 15:20:50 (5044): Setting Chipset Options for VM.
2025-02-24 15:20:50 (5044): Setting Graphics Controller Options for VM.
2025-02-24 15:20:51 (5044): Setting Boot Options for VM.
2025-02-24 15:20:51 (5044): Setting Network Configuration for NAT.
2025-02-24 15:20:51 (5044): Enabling VM Network Access.
2025-02-24 15:20:51 (5044): Disabling USB Support for VM.
2025-02-24 15:20:52 (5044): Disabling COM Port Support for VM.
2025-02-24 15:20:52 (5044): Disabling LPT Port Support for VM.
2025-02-24 15:20:52 (5044): Disabling Audio Support for VM.
2025-02-24 15:20:52 (5044): Disabling Clipboard Support for VM.
2025-02-24 15:20:53 (5044): Disabling Drag and Drop Support for VM.
2025-02-24 15:20:53 (5044): Adding storage controller(s) to VM.
2025-02-24 15:20:53 (5044): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-24 15:20:54 (5044): Adding VirtualBox Guest Additions to VM.
2025-02-24 15:20:54 (5044): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-24 15:20:54 (5044): forwarding host port 64125 to guest port 80
2025-02-24 15:20:54 (5044): Enabling remote desktop for VM.
2025-02-24 15:20:55 (5044): Enabling shared directory for VM.
2025-02-24 15:20:56 (5044): Starting VM using VBoxManage interface. (boinc_47c0272cd5d12923, slot#0)
2025-02-24 15:21:01 (5044): Successfully started VM. (PID = '6512')
2025-02-24 15:21:01 (5044): Reporting VM Process ID to BOINC.
2025-02-24 15:21:01 (5044): Guest Log: BIOS: VirtualBox 7.0.6
2025-02-24 15:21:01 (5044): Guest Log: CPUID EDX: 0x178bfbff
2025-02-24 15:21:01 (5044): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-24 15:21:01 (5044): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-24 15:21:01 (5044): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-24 15:21:01 (5044): Detected: Web Application Enabled (http://localhost:64125)
2025-02-24 15:21:01 (5044): Detected: Remote Desktop Enabled (localhost:64126)
2025-02-24 15:21:01 (5044): Preference change detected
2025-02-24 15:21:01 (5044): Setting CPU throttle for VM. (100%)
2025-02-24 15:21:01 (5044): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-24 15:21:03 (5044): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-24 15:21:03 (5044): Guest Log: BIOS: Booting from Hard Disk...
2025-02-24 15:21:05 (5044): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-24 15:21:05 (5044): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-24 15:21:05 (5044): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-24 15:21:05 (5044): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-24 15:21:05 (5044): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-24 15:21:05 (5044): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-24 15:21:05 (5044): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-24 15:21:05 (5044): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-24 15:21:05 (5044): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-24 15:21:05 (5044): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-24 15:21:05 (5044): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-24 15:21:05 (5044): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-24 15:21:05 (5044): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-24 15:21:05 (5044): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-24 15:21:05 (5044): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-24 15:21:05 (5044): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-24 15:21:05 (5044): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-24 15:21:05 (5044): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-24 15:21:05 (5044): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-24 15:21:05 (5044): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-24 15:21:05 (5044): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-24 15:21:05 (5044): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-24 15:21:05 (5044): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-24 15:21:05 (5044): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-24 15:21:05 (5044): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-24 15:21:05 (5044): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-24 15:21:05 (5044): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-24 15:21:05 (5044): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-24 15:21:05 (5044): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-24 15:21:05 (5044): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-24 15:21:05 (5044): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-24 15:21:05 (5044): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-24 15:21:13 (5044): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-24 15:21:13 (5044): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-24 15:21:18 (5044): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-24 15:21:18 (5044): Guest Log: 00:00:00.000132 main     Log opened 2025-02-24T15:21:16.394183000Z
2025-02-24 15:21:18 (5044): Guest Log: 00:00:00.000214 main     OS Product: Linux
2025-02-24 15:21:18 (5044): Guest Log: 00:00:00.000238 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-24 15:21:18 (5044): Guest Log: 00:00:00.000256 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-24 15:21:18 (5044): Guest Log: 00:00:00.000275 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-24 15:21:18 (5044): Guest Log: 00:00:00.000275 main     Process ID: 1335
2025-02-24 15:21:18 (5044): Guest Log: 00:00:00.000275 main     Package type: LINUX_64BITS_GENERIC
2025-02-24 15:21:18 (5044): Guest Log: 00:00:00.001226 main     5.2.32 r132073 started. Verbose level = 0
2025-02-24 15:21:18 (5044): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-24 15:21:18 (5044): Guest Log: [INFO] Mounting shared directory
2025-02-24 15:21:18 (5044): Guest Log: [INFO] Checking for init_data.xml
2025-02-24 15:21:21 (5044): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-24 15:21:21 (5044): Guest Log: [INFO] Detected branch: prod
2025-02-24 15:21:21 (5044): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-24 15:21:21 (5044): Guest Log: Copying input files
2025-02-24 15:21:22 (5044): Guest Log: Copied input files into RunAtlas.
2025-02-24 15:21:22 (5044): Guest Log: Detected user-configured HTTP proxy at http://192.168.0.39:3128 - will set in /etc/cvmfs/default.local
2025-02-24 15:21:28 (5044): Guest Log: 00:00:10.034160 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 178 054 000ns (GuestNow=1 740 406 888 218 056 000 ns GuestLast=1 740 410 476 396 110 000 ns fSetTimeLastLoop=true )
2025-02-24 15:21:35 (5044): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-24 15:21:35 (5044): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-24 15:21:35 (5044): Guest Log: 2.6.3.0 1609 0 31476 143009 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.39:3128 1
2025-02-24 15:21:36 (5044): Guest Log: copied the webapp to /var/www
2025-02-24 15:21:36 (5044): Guest Log: ATHENA_PROC_NUMBER=3
2025-02-24 15:21:36 (5044): Guest Log: ATHENA_CORE_NUMBER=3
2025-02-24 15:21:36 (5044): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-24 15:21:36 (5044): Guest Log:  *** Starting ATLAS job. (PandaID=6527081856 taskID=43205094) ***
2025-02-24 17:01:04 (5044): Status Report: Elapsed Time: '6000.000000'
2025-02-24 17:01:04 (5044): Status Report: CPU Time: '16311.828125'
2025-02-24 18:41:06 (5044): Status Report: Elapsed Time: '12000.000000'
2025-02-24 18:41:06 (5044): Status Report: CPU Time: '34229.828125'
2025-02-24 20:21:09 (5044): Status Report: Elapsed Time: '18000.000000'
2025-02-24 20:21:09 (5044): Status Report: CPU Time: '52145.406250'
2025-02-24 22:01:12 (5044): Status Report: Elapsed Time: '24000.000000'
2025-02-24 22:01:12 (5044): Status Report: CPU Time: '70060.687500'
2025-02-24 22:50:37 (5044): Guest Log:  *** Job finished ***
2025-02-24 22:50:37 (5044): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-24 22:50:37 (5044): Guest Log: 2025-02-24 21:50:05,310 | INFO     | [data] queue_monitor thread has finished
2025-02-24 22:50:37 (5044): Guest Log: 2025-02-24 21:50:11,522 | INFO     | job.realtimelogging is not enabled
2025-02-24 22:50:37 (5044): Guest Log: 2025-02-24 21:50:12,564 | INFO     | [payload] run_realtimelog thread has finished
2025-02-24 22:50:37 (5044): Guest Log: 2025-02-24 21:50:19,785 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139737372190528)>', '<ExcThread(monitor, started 139736249247488)>']
2025-02-24 22:50:37 (5044): Guest Log: 2025-02-24 21:50:20,786 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-24 22:50:37 (5044): Guest Log: 2025-02-24 21:50:20,786 | INFO     | [monitor] control thread has ended
2025-02-24 22:50:37 (5044): Guest Log: 2025-02-24 21:50:24,790 | INFO     | all workflow threads have been joined
2025-02-24 22:50:37 (5044): Guest Log: 2025-02-24 21:50:24,790 | INFO     | end of generic workflow (traces error code: 0)
2025-02-24 22:50:37 (5044): Guest Log: 2025-02-24 21:50:24,791 | INFO     | traces error code: 0
2025-02-24 22:50:37 (5044): Guest Log: 2025-02-24 21:50:24,791 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-24 22:50:37 (5044): Guest Log: 2025-02-24 21:50:25,767 [wrapper] ==== pilot stdout END ====
2025-02-24 22:50:37 (5044): Guest Log: 2025-02-24 21:50:25,770 [wrapper] ==== wrapper stdout RESUME ====
2025-02-24 22:50:37 (5044): Guest Log: 2025-02-24 21:50:25,774 [wrapper] pilotpid: 5923
2025-02-24 22:50:37 (5044): Guest Log: 2025-02-24 21:50:25,777 [wrapper] Pilot exit status: 0
2025-02-24 22:50:37 (5044): Guest Log: 2025-02-24 21:50:25,844 [wrapper] pandaids: 6527081856
2025-02-24 22:50:37 (5044): Guest Log: 2025-02-24 21:50:25,869 [wrapper] cleanup supervisor_pilot  4841 5924
2025-02-24 22:50:37 (5044): Guest Log: 2025-02-24 21:50:25,873 [wrapper] Test setup, not cleaning
2025-02-24 22:50:37 (5044): Guest Log: 2025-02-24 21:50:25,880 [wrapper] apfmon messages muted
2025-02-24 22:50:37 (5044): Guest Log: 2025-02-24 21:50:25,883 [wrapper] ==== wrapper stdout END ====
2025-02-24 22:50:37 (5044): Guest Log: 2025-02-24 21:50:25,887 [wrapper] ==== wrapper stderr END ====
2025-02-24 22:50:37 (5044): Guest Log:  *** Error codes and diagnostics ***
2025-02-24 22:50:37 (5044): Guest Log:     "exeErrorCode": 0,
2025-02-24 22:50:37 (5044): Guest Log:     "exeErrorDiag": "",
2025-02-24 22:50:37 (5044): Guest Log:     "pilotErrorCode": 0,
2025-02-24 22:50:37 (5044): Guest Log:     "pilotErrorDiag": "",
2025-02-24 22:50:37 (5044): Guest Log:  *** Listing of results directory ***
2025-02-24 22:50:37 (5044): Guest Log: total 334568
2025-02-24 22:50:37 (5044): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 23 17:13 pilot3.tar.gz
2025-02-24 22:50:37 (5044): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 23 17:33 queuedata.json
2025-02-24 22:50:37 (5044): Guest Log: -rwx------. 1 atlas atlas     35865 Feb 23 17:34 runpilot2-wrapper.sh
2025-02-24 22:50:37 (5044): Guest Log: -rwxr-xr-x. 1 atlas atlas      9082 Feb 24 14:21 init_data.xml
2025-02-24 22:50:37 (5044): Guest Log: -rwxr-xr-x. 1 atlas atlas    503558 Feb 24 14:21 input.tar.gz
2025-02-24 22:50:37 (5044): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb 24 14:21 start_atlas.sh
2025-02-24 22:50:37 (5044): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 24 14:21 EVNT.43092757._001884.pool.root.1 -> /data/./ATLAS.root_0
2025-02-24 22:50:37 (5044): Guest Log: -rw-r--r--. 1 atlas atlas      2549 Feb 24 14:21 pandaJob.out
2025-02-24 22:50:37 (5044): Guest Log: -rw-------. 1 atlas atlas       459 Feb 24 14:21 setup.sh.local
2025-02-24 22:50:37 (5044): Guest Log: -rw-------. 1 atlas atlas    987749 Feb 24 14:22 agis_schedconf.cvmfs.json
2025-02-24 22:50:37 (5044): Guest Log: drwx------. 4 atlas atlas      4096 Feb 24 14:22 pilot3
2025-02-24 22:50:37 (5044): Guest Log: -rw-------. 1 atlas atlas 331725197 Feb 24 21:49 HITS.43205094._039944.pool.root.1
2025-02-24 22:50:37 (5044): Guest Log: -rw-------. 1 atlas atlas        95 Feb 24 21:49 pilot_heartbeat.json
2025-02-24 22:50:37 (5044): Guest Log: -rw-------. 1 atlas atlas      1029 Feb 24 21:49 memory_monitor_summary.json
2025-02-24 22:50:37 (5044): Guest Log: -rw-------. 1 atlas atlas   1582569 Feb 24 21:49 agis_ddmendpoints.agis.ALL.json
2025-02-24 22:50:37 (5044): Guest Log: -rw-------. 1 atlas atlas    469116 Feb 24 21:49 log.43205094._039944.job.log.tgz.1
2025-02-24 22:50:37 (5044): Guest Log: -rw-------. 1 atlas atlas      7735 Feb 24 21:49 heartbeat.json
2025-02-24 22:50:37 (5044): Guest Log: -rw-------. 1 atlas atlas      4347 Feb 24 21:50 pilotlog.txt
2025-02-24 22:50:37 (5044): Guest Log: -rw-------. 1 atlas atlas   3100645 Feb 24 21:50 log.43205094._039944.job.log.1
2025-02-24 22:50:37 (5044): Guest Log: -rw-------. 1 atlas atlas       357 Feb 24 21:50 output.list
2025-02-24 22:50:37 (5044): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 24 21:50 runtime_log
2025-02-24 22:50:37 (5044): Guest Log: -rw-------. 1 atlas atlas   3584000 Feb 24 21:50 result.tar.gz
2025-02-24 22:50:37 (5044): Guest Log: -rw-r--r--. 1 atlas atlas     11305 Feb 24 21:50 runtime_log.err
2025-02-24 22:50:37 (5044): Guest Log: -rw-------. 1 atlas atlas       661 Feb 24 21:50 IXULDmn2U66nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm1lvKDmZAqJbm.diag
2025-02-24 22:50:37 (5044): Guest Log: Looking for outputfile HITS.43205094._039944.pool.root.1
2025-02-24 22:50:37 (5044): Guest Log: HITS file was successfully produced
2025-02-24 22:50:37 (5044): Guest Log: -rw-------. 1 atlas atlas 331725197 Feb 24 21:49 /home/atlas/RunAtlas/HITS.43205094._039944.pool.root.1
2025-02-24 22:50:39 (5044): Guest Log: Successfully finished the ATLAS job!
2025-02-24 22:50:39 (5044): Guest Log: Copying the results back to the shared directory!
2025-02-24 22:50:39 (5044): Guest Log:  *** Contents of shared directory: ***
2025-02-24 22:50:39 (5044): Guest Log: total 661776
2025-02-24 22:50:39 (5044): Guest Log: -rwxrwxrwx. 1 root root 341810602 Feb 24 14:20 ATLAS.root_0
2025-02-24 22:50:39 (5044): Guest Log: -rwxrwxrwx. 1 root root 331725197 Feb 24  2025 HITS.pool.root.1
2025-02-24 22:50:39 (5044): Guest Log: -rwxrwxrwx. 1 root root      9082 Feb 24 14:20 init_data.xml
2025-02-24 22:50:39 (5044): Guest Log: -rwxrwxrwx. 1 root root    503558 Feb 24 05:25 input.tar.gz
2025-02-24 22:50:39 (5044): Guest Log: -rwxrwxrwx. 1 root root   3584000 Feb 24  2025 result.tar.gz
2025-02-24 22:50:39 (5044): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb 24 05:25 start_atlas.sh
2025-02-24 22:50:39 (5044): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-24 22:50:39 (5044): VM Completion File Detected.
2025-02-24 22:50:39 (5044): Powering off VM.
2025-02-24 22:50:40 (5044): Successfully stopped VM.
2025-02-24 22:50:40 (5044): Deregistering VM. (boinc_47c0272cd5d12923, slot#0)
2025-02-24 22:50:40 (5044): Removing network bandwidth throttle group from VM.
2025-02-24 22:50:40 (5044): Removing VM from VirtualBox.
22:50:46 (5044): called boinc_finish(0)

</stderr_txt>
]]>

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