Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:19:04 (3012260): wrapper (7.7.26015): starting
10:19:04 (3012260): wrapper: running run_atlas (--nthreads 12)
[2025-02-24 10:19:04] Arguments: --nthreads 12
[2025-02-24 10:19:04] Threads: 12
[2025-02-24 10:19:04] Checking for CVMFS
[2025-02-24 10:19:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-24 10:19:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-24 10:19:05] Running cvmfs_config stat atlas.cern.ch
[2025-02-24 10:19:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-24 10:19:05] 2.11.5.0 2262 47495 216268 143011 1 285 31062417 45568000 12451 130560 0 200500330 99.660 234777092 22440 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-02-24 10:19:05] CVMFS is ok
[2025-02-24 10:19:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-24 10:19:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-24 10:19:05] Further information can be found at the LHC@home message board.
[2025-02-24 10:19:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-24 10:19:05] Checking for apptainer binary...
[2025-02-24 10:19:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-24 10:19:05] Running /usr/bin/apptainer --version
[2025-02-24 10:19:05] apptainer version 1.3.5-1.el9
[2025-02-24 10:19:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-24 10:19:05] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0028.triumf.lcg
[2025-02-24 10:19:05] apptainer works
[2025-02-24 10:19:05] Set ATHENA_PROC_NUMBER=12
[2025-02-24 10:19:05] Set ATHENA_CORE_NUMBER=12
[2025-02-24 10:19:05] Starting ATLAS job with PandaID=6525673727
[2025-02-24 10:19:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-24 12:41:37]  *** The last 200 lines of the pilot log: ***
[2025-02-24 12:41:37] 2025-02-24 20:41:23,513 | INFO     | -- intersect: -240016845369.10913
[2025-02-24 12:41:37] 2025-02-24 20:41:23,513 | INFO     | intersect: -240016845369.10913
[2025-02-24 12:41:37] 2025-02-24 20:41:23,514 | INFO     | chi2: 4.649480107420251
[2025-02-24 12:41:37] 2025-02-24 20:41:23,514 | INFO     | current chi2=4.649480107420251 (change=13.3969600816194 %)
[2025-02-24 12:41:37] 2025-02-24 20:41:23,514 | INFO     | right removable region: 134
[2025-02-24 12:41:37] 2025-02-24 20:41:23,514 | INFO     | model: linear, x: [1740421479.0, 1740421540.0, 1740421601.0, 1740421662.0, 1740421723.0, 1740421784.0, 1740421845.0, 1740421906.0, 1740421967.0, 1740422028.0, 1740
[2025-02-24 12:41:37] 2025-02-24 20:41:23,514 | INFO     | sum of square deviations: 763085267.6592596
[2025-02-24 12:41:37] 2025-02-24 20:41:23,515 | INFO     | sum of deviations: 54368817929.73337
[2025-02-24 12:41:37] 2025-02-24 20:41:23,515 | INFO     | mean x: 1740425566.4740741
[2025-02-24 12:41:37] 2025-02-24 20:41:23,515 | INFO     | mean y: 3121471.066666667
[2025-02-24 12:41:37] 2025-02-24 20:41:23,515 | INFO     | -- intersect: -123999902508.33853
[2025-02-24 12:41:37] 2025-02-24 20:41:23,515 | INFO     | intersect: -123999902508.33853
[2025-02-24 12:41:37] 2025-02-24 20:41:23,515 | INFO     | chi2: 2.8881337109775362
[2025-02-24 12:41:37] 2025-02-24 20:41:23,515 | INFO     | current chi2=2.8881337109775362 (change=46.20448882828166 %)
[2025-02-24 12:41:37] 2025-02-24 20:41:23,515 | INFO     | model: linear, x: [1740421784.0, 1740421845.0, 1740421906.0, 1740421967.0, 1740422028.0, 1740422089.0, 1740422150.0, 1740422211.0, 1740422272.0, 1740422333.0, 1740
[2025-02-24 12:41:37] 2025-02-24 20:41:23,515 | INFO     | sum of square deviations: 681399098.9923089
[2025-02-24 12:41:37] 2025-02-24 20:41:23,515 | INFO     | sum of deviations: 19706404125.484627
[2025-02-24 12:41:37] 2025-02-24 20:41:23,516 | INFO     | mean x: 1740425718.9923077
[2025-02-24 12:41:37] 2025-02-24 20:41:23,516 | INFO     | mean y: 3186211.4846153846
[2025-02-24 12:41:37] 2025-02-24 20:41:23,516 | INFO     | -- intersect: -50330799582.700714
[2025-02-24 12:41:37] 2025-02-24 20:41:23,516 | INFO     | intersect: -50330799582.700714
[2025-02-24 12:41:37] 2025-02-24 20:41:23,516 | INFO     | chi2: 1.4613336046124676
[2025-02-24 12:41:37] 2025-02-24 20:41:23,516 | INFO     | current chi2=1.4613336046124676 (change=49.40214855503157 %)
[2025-02-24 12:41:37] 2025-02-24 20:41:23,516 | INFO     | model: linear, x: [1740422089.0, 1740422150.0, 1740422211.0, 1740422272.0, 1740422333.0, 1740422394.0, 1740422455.0, 1740422516.0, 1740422577.0, 1740422638.0, 1740
[2025-02-24 12:41:37] 2025-02-24 20:41:23,516 | INFO     | sum of square deviations: 605759555.2320002
[2025-02-24 12:41:37] 2025-02-24 20:41:23,516 | INFO     | sum of deviations: -2264977426.9519987
[2025-02-24 12:41:37] 2025-02-24 20:41:23,516 | INFO     | mean x: 1740425871.512
[2025-02-24 12:41:37] 2025-02-24 20:41:23,516 | INFO     | mean y: 3230107.968
[2025-02-24 12:41:37] 2025-02-24 20:41:23,517 | INFO     | -- intersect: 6510804405.7406225
[2025-02-24 12:41:37] 2025-02-24 20:41:23,517 | INFO     | intersect: 6510804405.7406225
[2025-02-24 12:41:37] 2025-02-24 20:41:23,517 | INFO     | chi2: 0.749162079000478
[2025-02-24 12:41:37] 2025-02-24 20:41:23,517 | INFO     | current chi2=0.749162079000478 (change=48.73435630058278 %)
[2025-02-24 12:41:37] 2025-02-24 20:41:23,517 | INFO     | model: linear, x: [1740422394.0, 1740422455.0, 1740422516.0, 1740422577.0, 1740422638.0, 1740422699.0, 1740422760.0, 1740422821.0, 1740422882.0, 1740422943.0, 1740
[2025-02-24 12:41:37] 2025-02-24 20:41:23,517 | INFO     | sum of square deviations: 535934073.86666626
[2025-02-24 12:41:37] 2025-02-24 20:41:23,517 | INFO     | sum of deviations: -6029444084.833333
[2025-02-24 12:41:37] 2025-02-24 20:41:23,517 | INFO     | mean x: 1740426024.0333333
[2025-02-24 12:41:37] 2025-02-24 20:41:23,517 | INFO     | mean y: 3238178.7083333335
[2025-02-24 12:41:37] 2025-02-24 20:41:23,517 | INFO     | -- intersect: 19583634177.766426
[2025-02-24 12:41:37] 2025-02-24 20:41:23,517 | INFO     | intersect: 19583634177.766426
[2025-02-24 12:41:37] 2025-02-24 20:41:23,518 | INFO     | chi2: 0.7123353432899248
[2025-02-24 12:41:37] 2025-02-24 20:41:23,518 | INFO     | current chi2=0.7123353432899248 (change=4.915723411906675 %)
[2025-02-24 12:41:37] 2025-02-24 20:41:23,518 | INFO     | left removable region: 40
[2025-02-24 12:41:37] 2025-02-24 20:41:23,518 | INFO     | model: linear, x: [1740423614.0, 1740423675.0, 1740423736.0, 1740423797.0, 1740423858.0, 1740423919.0, 1740423980.0, 1740424041.0, 1740424102.0, 1740424163.0, 1740
[2025-02-24 12:41:37] 2025-02-24 20:41:23,518 | INFO     | sum of square deviations: 257602747.20212725
[2025-02-24 12:41:37] 2025-02-24 20:41:23,518 | INFO     | sum of deviations: 1239481089.542553
[2025-02-24 12:41:37] 2025-02-24 20:41:23,518 | INFO     | mean x: 1740426451.1382978
[2025-02-24 12:41:37] 2025-02-24 20:41:23,518 | INFO     | mean y: 3266505.265957447
[2025-02-24 12:41:37] 2025-02-24 20:41:23,518 | INFO     | -- intersect: -8370967455.185229
[2025-02-24 12:41:37] 2025-02-24 20:41:23,518 | INFO     | intersect: -8370967455.185229
[2025-02-24 12:41:37] 2025-02-24 20:41:23,518 | INFO     | chi2: 0.00019053871241620895
[2025-02-24 12:41:37] 2025-02-24 20:41:23,518 | INFO     | -- intersect: -8370967455.185229
[2025-02-24 12:41:37] 2025-02-24 20:41:23,519 | INFO     | current memory leak: 4.81 B/s (using 94 data points, chi2=0.00)
[2025-02-24 12:41:37] 2025-02-24 20:41:23,519 | INFO     | ..............................
[2025-02-24 12:41:37] 2025-02-24 20:41:23,519 | INFO     | . Timing measurements:
[2025-02-24 12:41:37] 2025-02-24 20:41:23,519 | INFO     | . get job = 0 s
[2025-02-24 12:41:37] 2025-02-24 20:41:23,519 | INFO     | . initial setup = 2 s
[2025-02-24 12:41:37] 2025-02-24 20:41:23,519 | INFO     | . payload setup = 3 s
[2025-02-24 12:41:37] 2025-02-24 20:41:23,519 | INFO     | . stage-in = 0 s
[2025-02-24 12:41:37] 2025-02-24 20:41:23,519 | INFO     | . payload execution = 8503 s
[2025-02-24 12:41:37] 2025-02-24 20:41:23,519 | INFO     | . stage-out = 0 s
[2025-02-24 12:41:37] 2025-02-24 20:41:23,519 | INFO     | . log creation = 0 s
[2025-02-24 12:41:37] 2025-02-24 20:41:23,519 | INFO     | ..............................
[2025-02-24 12:41:37] 2025-02-24 20:41:23,571 | INFO     | 
[2025-02-24 12:41:37] 2025-02-24 20:41:23,571 | INFO     | job summary report
[2025-02-24 12:41:37] 2025-02-24 20:41:23,571 | INFO     | --------------------------------------------------
[2025-02-24 12:41:37] 2025-02-24 20:41:23,571 | INFO     | PanDA job id: 6525673727
[2025-02-24 12:41:37] 2025-02-24 20:41:23,571 | INFO     | task id: 43205094
[2025-02-24 12:41:37] 2025-02-24 20:41:23,571 | INFO     | errors: (none)
[2025-02-24 12:41:37] 2025-02-24 20:41:23,571 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-24 12:41:37] 2025-02-24 20:41:23,571 | INFO     | pilot state: finished 
[2025-02-24 12:41:37] 2025-02-24 20:41:23,571 | INFO     | transexitcode: 0
[2025-02-24 12:41:37] 2025-02-24 20:41:23,572 | INFO     | exeerrorcode: 0
[2025-02-24 12:41:37] 2025-02-24 20:41:23,572 | INFO     | exeerrordiag: 
[2025-02-24 12:41:37] 2025-02-24 20:41:23,572 | INFO     | exitcode: 0
[2025-02-24 12:41:37] 2025-02-24 20:41:23,572 | INFO     | exitmsg: OK
[2025-02-24 12:41:37] 2025-02-24 20:41:23,572 | INFO     | cpuconsumptiontime: 55514 s
[2025-02-24 12:41:37] 2025-02-24 20:41:23,572 | INFO     | nevents: 400
[2025-02-24 12:41:37] 2025-02-24 20:41:23,572 | INFO     | neventsw: 0
[2025-02-24 12:41:37] 2025-02-24 20:41:23,572 | INFO     | pid: 3022316
[2025-02-24 12:41:37] 2025-02-24 20:41:23,572 | INFO     | pgrp: 3022316
[2025-02-24 12:41:37] 2025-02-24 20:41:23,572 | INFO     | corecount: 12
[2025-02-24 12:41:37] 2025-02-24 20:41:23,572 | INFO     | event service: False
[2025-02-24 12:41:37] 2025-02-24 20:41:23,572 | INFO     | sizes: {0: 2383358, 3: 2383564, 11: 2383592, 8510: 2411362, 8511: 2420297, 8513: 2420353, 8517: 2420651}
[2025-02-24 12:41:37] 2025-02-24 20:41:23,572 | INFO     | --------------------------------------------------
[2025-02-24 12:41:37] 2025-02-24 20:41:23,572 | INFO     | 
[2025-02-24 12:41:37] 2025-02-24 20:41:23,572 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-02-24 12:41:37] 2025-02-24 20:41:23,584 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-24 12:41:37] 2025-02-24 20:41:23,585 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-24 12:41:37] 2025-02-24 20:41:23,585 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-24 12:41:37] 2025-02-24 20:41:23,585 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-24 12:41:37] 2025-02-24 20:41:23,585 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-24 12:41:37] 2025-02-24 20:41:23,585 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-24 12:41:37] 2025-02-24 20:41:23,585 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-24 12:41:37] 2025-02-24 20:41:23,585 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-24 12:41:37] 2025-02-24 20:41:23,585 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-24 12:41:37] 2025-02-24 20:41:23,585 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-24 12:41:37] 2025-02-24 20:41:23,585 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-24 12:41:37] 2025-02-24 20:41:23,585 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-24 12:41:37] 2025-02-24 20:41:23,585 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-24 12:41:37] 2025-02-24 20:41:23,585 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-24 12:41:37] 2025-02-24 20:41:23,585 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-24 12:41:37] 2025-02-24 20:41:23,585 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-24 12:41:37] 2025-02-24 20:41:23,585 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-24 12:41:37] 2025-02-24 20:41:23,585 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-24 12:41:37] 2025-02-24 20:41:23,585 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-24 12:41:37] 2025-02-24 20:41:23,586 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-24 12:41:37] 2025-02-24 20:41:23,586 | INFO     | job 6525673727 has completed (purged errors)
[2025-02-24 12:41:37] 2025-02-24 20:41:23,586 | INFO     | overall cleanup function is called
[2025-02-24 12:41:37] 2025-02-24 20:41:23,621 | WARNING  | process 3022316 can no longer be monitored (due to stat problems) - aborting
[2025-02-24 12:41:37] 2025-02-24 20:41:23,788 | INFO     | using path: /home/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-02-24 12:41:37] 2025-02-24 20:41:23,890 | INFO     | number of running child processes to parent process 3022316: 1
[2025-02-24 12:41:37] 2025-02-24 20:41:23,890 | INFO     | maximum number of monitored processes: 6
[2025-02-24 12:41:37] 2025-02-24 20:41:23,891 | INFO     | aborting job monitoring since job object (job id=6525673727) has expired
[2025-02-24 12:41:37] 2025-02-24 20:41:24,593 | INFO     | --- collectZombieJob: --- 10, [3022316]
[2025-02-24 12:41:37] 2025-02-24 20:41:24,593 | INFO     | zombie collector waiting for pid 3022316
[2025-02-24 12:41:37] 2025-02-24 20:41:24,593 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-24 12:41:37] 2025-02-24 20:41:24,593 | INFO     | collected zombie processes
[2025-02-24 12:41:37] 2025-02-24 20:41:24,593 | INFO     | will attempt to kill all subprocesses of pid=3022316
[2025-02-24 12:41:37] 2025-02-24 20:41:24,695 | INFO     | process IDs to be killed: [3022316] (in reverse order)
[2025-02-24 12:41:37] 2025-02-24 20:41:24,769 | WARNING  | found no corresponding commands to process id(s)
[2025-02-24 12:41:37] 2025-02-24 20:41:24,769 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-24 12:41:37] 2025-02-24 20:41:24,792 | INFO     | did not find any defunct processes belonging to 3022316
[2025-02-24 12:41:37] 2025-02-24 20:41:24,816 | INFO     | did not find any defunct processes belonging to 3022316
[2025-02-24 12:41:37] 2025-02-24 20:41:24,816 | INFO     | ready for new job
[2025-02-24 12:41:37] 2025-02-24 20:41:24,816 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-24 12:41:37] 2025-02-24 20:41:24,817 | INFO     | **************************************
[2025-02-24 12:41:37] 2025-02-24 20:41:24,817 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-24 12:41:37] 2025-02-24 20:41:24,818 | INFO     | **************************************
[2025-02-24 12:41:37] 2025-02-24 20:41:24,818 | INFO     | 
[2025-02-24 12:41:37] 2025-02-24 20:41:24,820 | INFO     | architecture information:
[2025-02-24 12:41:37] 2025-02-24 20:41:24,820 | INFO     | executing command: cat /etc/os-release
[2025-02-24 12:41:37] 2025-02-24 20:41:24,830 | INFO     | cat /etc/os-release:
[2025-02-24 12:41:37] NAME="CentOS Linux"
[2025-02-24 12:41:37] VERSION="7 (Core)"
[2025-02-24 12:41:37] ID="centos"
[2025-02-24 12:41:37] ID_LIKE="rhel fedora"
[2025-02-24 12:41:37] VERSION_ID="7"
[2025-02-24 12:41:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-24 12:41:37] ANSI_COLOR="0;31"
[2025-02-24 12:41:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-24 12:41:37] HOME_URL="https://www.centos.org/"
[2025-02-24 12:41:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-24 12:41:37] 
[2025-02-24 12:41:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-24 12:41:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-24 12:41:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-24 12:41:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-24 12:41:37] 
[2025-02-24 12:41:37] 2025-02-24 20:41:24,830 | INFO     | **************************************
[2025-02-24 12:41:37] 2025-02-24 20:41:24,868 | INFO     | PID=3015864 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-02-24 12:41:37] 2025-02-24 20:41:24,868 | INFO     | .. there are 35 such processes running
[2025-02-24 12:41:37] 2025-02-24 20:41:25,332 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-02-24 12:41:37] 2025-02-24 20:41:25,343 | INFO     | sufficient remaining disk space (2038246146048 B)
[2025-02-24 12:41:37] 2025-02-24 20:41:25,343 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-24 12:41:37] 2025-02-24 20:41:25,343 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-24 12:41:37] 2025-02-24 20:41:25,343 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-24 12:41:37] 2025-02-24 20:41:25,343 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-24 12:41:37] 2025-02-24 20:41:25,344 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-24 12:41:37] 2025-02-24 20:41:25,344 | INFO     | found 0 job(s) in 20 queues
[2025-02-24 12:41:37] 2025-02-24 20:41:25,344 | INFO     | aborting loop
[2025-02-24 12:41:37] 2025-02-24 20:41:25,344 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-24 12:41:37] 2025-02-24 20:41:25,344 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-24 12:41:37] 2025-02-24 20:41:25,767 | INFO     | all data control threads have been joined
[2025-02-24 12:41:37] 2025-02-24 20:41:26,271 | INFO     | all payload control threads have been joined
[2025-02-24 12:41:37] 2025-02-24 20:41:26,348 | INFO     | [job] retrieve thread has finished
[2025-02-24 12:41:37] 2025-02-24 20:41:26,349 | INFO     | [job] queue monitor thread has finished
[2025-02-24 12:41:37] 2025-02-24 20:41:26,349 | INFO     | [job] job monitor thread has finished
[2025-02-24 12:41:37] 2025-02-24 20:41:26,421 | INFO     | [payload] validate_post thread has finished
[2025-02-24 12:41:37] 2025-02-24 20:41:26,470 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-24 12:41:37] 2025-02-24 20:41:26,473 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-24 12:41:37] 2025-02-24 20:41:26,522 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-24 12:41:37] 2025-02-24 20:41:26,770 | INFO     | [data] control thread has finished
[2025-02-24 12:41:37] 2025-02-24 20:41:26,885 | INFO     | all job control threads have been joined
[2025-02-24 12:41:37] 2025-02-24 20:41:26,964 | INFO     | [payload] validate_pre thread has finished
[2025-02-24 12:41:37] 2025-02-24 20:41:27,003 | INFO     | [job] create_data_payload thread has finished
[2025-02-24 12:41:37] 2025-02-24 20:41:27,029 | INFO     | [payload] failed_post thread has finished
[2025-02-24 12:41:37] 2025-02-24 20:41:27,129 | INFO     | [job] validate thread has finished
[2025-02-24 12:41:37] 2025-02-24 20:41:27,252 | INFO     | [payload] execute_payloads thread has finished
[2025-02-24 12:41:37] 2025-02-24 20:41:27,276 | INFO     | [payload] control thread has finished
[2025-02-24 12:41:37] 2025-02-24 20:41:27,451 | INFO     | [data] copytool_in thread has finished
[2025-02-24 12:41:37] 2025-02-24 20:41:27,890 | INFO     | [job] control thread has finished
[2025-02-24 12:41:37] 2025-02-24 20:41:28,478 | INFO     | [data] copytool_out thread has finished
[2025-02-24 12:41:37] 2025-02-24 20:41:30,475 | INFO     | [data] queue_monitor thread has finished
[2025-02-24 12:41:37] 2025-02-24 20:41:31,975 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139849222596416)>', '<ExcThread(monitor, started 139848690165504)>']
[2025-02-24 12:41:37] 2025-02-24 20:41:32,379 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-24 12:41:37] 2025-02-24 20:41:32,379 | INFO     | [monitor] control thread has ended
[2025-02-24 12:41:37] 2025-02-24 20:41:37,000 | INFO     | all workflow threads have been joined
[2025-02-24 12:41:37] 2025-02-24 20:41:37,000 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-24 12:41:37] 2025-02-24 20:41:37,000 | INFO     | traces error code: 0
[2025-02-24 12:41:37] 2025-02-24 20:41:37,000 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-24 12:41:37] 2025-02-24 20:41:37,091 [wrapper] ==== pilot stdout END ====
[2025-02-24 12:41:37] 2025-02-24 20:41:37,093 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-24 12:41:37] 2025-02-24 20:41:37,095 [wrapper] pilotpid: 3015864
[2025-02-24 12:41:37] 2025-02-24 20:41:37,096 [wrapper] Pilot exit status: 0
[2025-02-24 12:41:37] 2025-02-24 20:41:37,103 [wrapper] pandaids: 6525673727
[2025-02-24 12:41:37] 2025-02-24 20:41:37,151 [wrapper] cleanup supervisor_pilot 3677185 3015865
[2025-02-24 12:41:37] 2025-02-24 20:41:37,153 [wrapper] Test setup, not cleaning
[2025-02-24 12:41:37] 2025-02-24 20:41:37,156 [wrapper] apfmon messages muted
[2025-02-24 12:41:37] 2025-02-24 20:41:37,158 [wrapper] ==== wrapper stdout END ====
[2025-02-24 12:41:37] 2025-02-24 20:41:37,159 [wrapper] ==== wrapper stderr END ====
[2025-02-24 12:41:37]  *** Error codes and diagnostics ***
[2025-02-24 12:41:37]     "exeErrorCode": 0,
[2025-02-24 12:41:37]     "exeErrorDiag": "",
[2025-02-24 12:41:37]     "pilotErrorCode": 0,
[2025-02-24 12:41:37]     "pilotErrorDiag": "",
[2025-02-24 12:41:37]  *** Listing of results directory ***
[2025-02-24 12:41:37] total 673368
[2025-02-24 12:41:37] -rw-r--r--. 1 boinc boinc      5118 Feb 23 06:08 queuedata.json
[2025-02-24 12:41:37] -rw-r--r--. 1 boinc boinc    491065 Feb 23 06:09 pilot3.tar.gz
[2025-02-24 12:41:37] -rwx------. 1 boinc boinc     35865 Feb 23 06:10 runpilot2-wrapper.sh
[2025-02-24 12:41:37] -rw-r--r--. 1 boinc boinc       100 Feb 24 10:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-24 12:41:37] -rwxr-xr-x. 1 boinc boinc      7986 Feb 24 10:19 run_atlas
[2025-02-24 12:41:37] -rw-r--r--. 1 boinc boinc       105 Feb 24 10:19 job.xml
[2025-02-24 12:41:37] -rw-r--r--. 1 boinc boinc      6603 Feb 24 10:19 init_data.xml
[2025-02-24 12:41:37] -rw-r--r--. 2 boinc boinc 345981026 Feb 24 10:19 EVNT.43092757._001733.pool.root.1
[2025-02-24 12:41:37] -rw-r--r--. 2 boinc boinc     17569 Feb 24 10:19 start_atlas.sh
[2025-02-24 12:41:37] drwxrwx--x. 2 boinc boinc      4096 Feb 24 10:19 shared
[2025-02-24 12:41:37] -rw-r--r--. 2 boinc boinc    503563 Feb 24 10:19 input.tar.gz
[2025-02-24 12:41:37] -rw-r--r--. 1 boinc boinc         0 Feb 24 10:19 boinc_lockfile
[2025-02-24 12:41:37] -rw-r--r--. 1 boinc boinc      2549 Feb 24 10:19 pandaJob.out
[2025-02-24 12:41:37] -rw-------. 1 boinc boinc       424 Feb 24 10:19 setup.sh.local
[2025-02-24 12:41:37] -rw-------. 1 boinc boinc    987749 Feb 24 10:19 agis_schedconf.cvmfs.json
[2025-02-24 12:41:37] -rw-------. 1 boinc boinc   1582569 Feb 24 10:19 agis_ddmendpoints.agis.ALL.json
[2025-02-24 12:41:37] drwx------. 4 boinc boinc      4096 Feb 24 10:19 pilot3
[2025-02-24 12:41:37] -rw-------. 1 boinc boinc        95 Feb 24 12:40 pilot_heartbeat.json
[2025-02-24 12:41:37] -rw-------. 1 boinc boinc 337241926 Feb 24 12:40 HITS.43205094._039540.pool.root.1
[2025-02-24 12:41:37] -rw-r--r--. 1 boinc boinc       530 Feb 24 12:41 boinc_task_state.xml
[2025-02-24 12:41:37] -rw-------. 1 boinc boinc      1054 Feb 24 12:41 memory_monitor_summary.json
[2025-02-24 12:41:37] -rw-------. 1 boinc boinc    408290 Feb 24 12:41 log.43205094._039540.job.log.tgz.1
[2025-02-24 12:41:37] -rw-------. 1 boinc boinc      7737 Feb 24 12:41 heartbeat.json
[2025-02-24 12:41:37] -rw-r--r--. 1 boinc boinc      8192 Feb 24 12:41 boinc_mmap_file
[2025-02-24 12:41:37] -rw-r--r--. 1 boinc boinc        27 Feb 24 12:41 wrapper_checkpoint.txt
[2025-02-24 12:41:37] -rw-------. 1 boinc boinc      4732 Feb 24 12:41 pilotlog.txt
[2025-02-24 12:41:37] -rw-------. 1 boinc boinc    838403 Feb 24 12:41 log.43205094._039540.job.log.1
[2025-02-24 12:41:37] -rw-------. 1 boinc boinc       357 Feb 24 12:41 output.list
[2025-02-24 12:41:37] -rw-r--r--. 1 boinc boinc       620 Feb 24 12:41 runtime_log
[2025-02-24 12:41:37] -rw-------. 1 boinc boinc   1269760 Feb 24 12:41 result.tar.gz
[2025-02-24 12:41:37] -rw-r--r--. 1 boinc boinc     11144 Feb 24 12:41 runtime_log.err
[2025-02-24 12:41:37] -rw-------. 1 boinc boinc       659 Feb 24 12:41 oAxNDmQrR66nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm4avKDmXaRxfm.diag
[2025-02-24 12:41:37] -rw-r--r--. 1 boinc boinc     21961 Feb 24 12:41 stderr.txt
[2025-02-24 12:41:37] HITS file was successfully produced:
[2025-02-24 12:41:37] -rw-------. 1 boinc boinc 337241926 Feb 24 12:40 shared/HITS.pool.root.1
[2025-02-24 12:41:37]  *** Contents of shared directory: ***
[2025-02-24 12:41:37] total 668976
[2025-02-24 12:41:37] -rw-r--r--. 2 boinc boinc 345981026 Feb 24 10:19 ATLAS.root_0
[2025-02-24 12:41:37] -rw-r--r--. 2 boinc boinc     17569 Feb 24 10:19 start_atlas.sh
[2025-02-24 12:41:37] -rw-r--r--. 2 boinc boinc    503563 Feb 24 10:19 input.tar.gz
[2025-02-24 12:41:37] -rw-------. 1 boinc boinc 337241926 Feb 24 12:40 HITS.pool.root.1
[2025-02-24 12:41:37] -rw-------. 1 boinc boinc   1269760 Feb 24 12:41 result.tar.gz
12:41:38 (3012260): run_atlas exited; CPU time 55468.124616
12:41:38 (3012260): called boinc_finish(0)

</stderr_txt>
]]>

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