Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-24 04:24:49 (639923): Detected: vboxwrapper 26206
2025-02-24 04:24:49 (639923): Detected: BOINC client v8.0.4
2025-02-24 04:24:49 (639923): Detected: VirtualBox VboxManage Interface (Version: 7.0.20)
2025-02-24 04:24:49 (639923): Successfully copied 'init_data.xml' to the shared directory.
2025-02-24 04:24:50 (639923): Create VM. (boinc_1bf06bdcb83c195b, slot#15)
2025-02-24 04:24:50 (639923): Setting Memory Size for VM. (4096MB)
2025-02-24 04:24:50 (639923): Setting CPU Count for VM. (1)
2025-02-24 04:24:50 (639923): Setting Chipset Options for VM.
2025-02-24 04:24:50 (639923): Setting Graphics Controller Options for VM.
2025-02-24 04:24:50 (639923): Setting Boot Options for VM.
2025-02-24 04:24:50 (639923): Setting Network Configuration for NAT.
2025-02-24 04:24:50 (639923): Enabling VM Network Access.
2025-02-24 04:24:51 (639923): Disabling USB Support for VM.
2025-02-24 04:24:51 (639923): Disabling COM Port Support for VM.
2025-02-24 04:24:51 (639923): Disabling LPT Port Support for VM.
2025-02-24 04:24:51 (639923): Disabling Audio Support for VM.
2025-02-24 04:24:51 (639923): Disabling Clipboard Support for VM.
2025-02-24 04:24:51 (639923): Disabling Drag and Drop Support for VM.
2025-02-24 04:24:51 (639923): Adding storage controller(s) to VM.
2025-02-24 04:24:51 (639923): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-24 04:24:51 (639923): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-24 04:24:52 (639923): forwarding host port 38069 to guest port 80
2025-02-24 04:24:52 (639923): Enabling remote desktop for VM.
2025-02-24 04:24:52 (639923): Enabling shared directory for VM.
2025-02-24 04:24:52 (639923): Starting VM using VBoxManage interface. (boinc_1bf06bdcb83c195b, slot#15)
2025-02-24 04:24:53 (639923): Successfully started VM. (PID = '640313')
2025-02-24 04:24:53 (639923): Reporting VM Process ID to BOINC.
2025-02-24 04:24:53 (639923): Guest Log: BIOS: VirtualBox 7.0.20
2025-02-24 04:24:53 (639923): Guest Log: CPUID EDX: 0x178bfbff
2025-02-24 04:24:53 (639923): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-24 04:24:53 (639923): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-24 04:24:53 (639923): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-24 04:24:53 (639923): Detected: Web Application Enabled (http://localhost:38069)
2025-02-24 04:24:53 (639923): Detected: Remote Desktop Enabled (localhost:35647)
2025-02-24 04:24:53 (639923): Preference change detected
2025-02-24 04:24:53 (639923): Setting CPU throttle for VM. (100%)
2025-02-24 04:24:54 (639923): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-24 04:24:55 (639923): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-24 04:24:55 (639923): Guest Log: BIOS: Booting from Hard Disk...
2025-02-24 04:24:58 (639923): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-24 04:24:58 (639923): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-24 04:24:58 (639923): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-24 04:24:58 (639923): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-24 04:24:58 (639923): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-24 04:24:58 (639923): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-24 04:24:58 (639923): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-24 04:24:58 (639923): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-24 04:24:58 (639923): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-24 04:24:58 (639923): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-24 04:24:58 (639923): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-24 04:24:58 (639923): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-24 04:24:58 (639923): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-24 04:24:58 (639923): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-24 04:24:58 (639923): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-24 04:24:58 (639923): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-24 04:24:58 (639923): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-24 04:24:58 (639923): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-24 04:24:58 (639923): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-24 04:24:58 (639923): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-24 04:24:58 (639923): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-24 04:24:58 (639923): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-24 04:24:58 (639923): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-24 04:24:58 (639923): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-24 04:24:58 (639923): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-24 04:24:58 (639923): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-24 04:24:58 (639923): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-24 04:24:58 (639923): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-24 04:24:58 (639923): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-24 04:24:58 (639923): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-24 04:24:58 (639923): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-24 04:24:58 (639923): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-24 04:25:04 (639923): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-24 04:25:04 (639923): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-24 04:25:17 (639923): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-24 04:25:17 (639923): Guest Log: 00:00:00.000257 main     Log opened 2025-02-24T03:25:16.087052000Z
2025-02-24 04:25:17 (639923): Guest Log: 00:00:00.000462 main     OS Product: Linux
2025-02-24 04:25:17 (639923): Guest Log: 00:00:00.000540 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-24 04:25:17 (639923): Guest Log: 00:00:00.000610 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-24 04:25:17 (639923): Guest Log: 00:00:00.000660 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-24 04:25:17 (639923): Guest Log: 00:00:00.000662 main     Process ID: 1235
2025-02-24 04:25:17 (639923): Guest Log: 00:00:00.000662 main     Package type: LINUX_64BITS_GENERIC
2025-02-24 04:25:17 (639923): Guest Log: 00:00:00.002884 main     5.2.32 r132073 started. Verbose level = 0
2025-02-24 04:25:18 (639923): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-24 04:25:18 (639923): Guest Log: [INFO] Mounting shared directory
2025-02-24 04:25:18 (639923): Guest Log: [INFO] Checking for init_data.xml
2025-02-24 04:25:21 (639923): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-24 04:25:21 (639923): Guest Log: [INFO] Detected branch: prod
2025-02-24 04:25:21 (639923): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-24 04:25:21 (639923): Guest Log: Copying input files
2025-02-24 04:25:23 (639923): Guest Log: Copied input files into RunAtlas.
2025-02-24 04:25:24 (639923): Guest Log: Detected user-configured HTTP proxy at http://localhost:3128 - will set in /etc/cvmfs/default.local
2025-02-24 04:25:45 (639923): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-24 04:25:45 (639923): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-24 04:25:45 (639923): Guest Log: 2.6.3.0 1504 0 29528 142997 3 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
2025-02-24 04:25:45 (639923): Guest Log: copied the webapp to /var/www
2025-02-24 04:25:46 (639923): Guest Log: core_number=1
2025-02-24 04:25:46 (639923): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-24 04:25:46 (639923): Guest Log:  *** Starting ATLAS job. (PandaID=6527259178 taskID=43078919) ***
2025-02-24 06:03:54 (639923): Status Report: Elapsed Time: '6000.000000'
2025-02-24 06:03:54 (639923): Status Report: CPU Time: '5255.780000'
2025-02-24 07:42:55 (639923): Status Report: Elapsed Time: '12000.000000'
2025-02-24 07:42:55 (639923): Status Report: CPU Time: '11199.400000'
2025-02-24 09:21:56 (639923): Status Report: Elapsed Time: '18000.000000'
2025-02-24 09:21:56 (639923): Status Report: CPU Time: '17148.110000'
2025-02-24 11:00:57 (639923): Status Report: Elapsed Time: '24000.000000'
2025-02-24 11:00:57 (639923): Status Report: CPU Time: '23096.920000'
2025-02-24 12:39:58 (639923): Status Report: Elapsed Time: '30000.000000'
2025-02-24 12:39:58 (639923): Status Report: CPU Time: '29045.640000'
2025-02-24 14:18:59 (639923): Status Report: Elapsed Time: '36000.000000'
2025-02-24 14:18:59 (639923): Status Report: CPU Time: '34995.710000'
2025-02-24 15:58:00 (639923): Status Report: Elapsed Time: '42000.000000'
2025-02-24 15:58:00 (639923): Status Report: CPU Time: '40943.960000'
2025-02-24 17:37:00 (639923): Status Report: Elapsed Time: '48000.000000'
2025-02-24 17:37:00 (639923): Status Report: CPU Time: '46893.020000'
2025-02-24 19:16:01 (639923): Status Report: Elapsed Time: '54000.000000'
2025-02-24 19:16:01 (639923): Status Report: CPU Time: '52844.830000'
2025-02-24 20:55:02 (639923): Status Report: Elapsed Time: '60000.000000'
2025-02-24 20:55:02 (639923): Status Report: CPU Time: '58795.070000'
2025-02-24 22:34:03 (639923): Status Report: Elapsed Time: '66000.000000'
2025-02-24 22:34:03 (639923): Status Report: CPU Time: '64744.880000'
2025-02-24 23:52:55 (639923): Guest Log:  *** Job finished ***
2025-02-24 23:52:55 (639923): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-24 23:52:55 (639923): Guest Log: 2025-02-24 22:52:45,337 | INFO     | [payload] run_realtimelog thread has finished
2025-02-24 23:52:55 (639923): Guest Log: 2025-02-24 22:52:46,456 | INFO     | [data] copytool_out thread has finished
2025-02-24 23:52:55 (639923): Guest Log: 2025-02-24 22:52:47,363 | INFO     | [data] queue_monitor thread has finished
2025-02-24 23:52:55 (639923): Guest Log: 2025-02-24 22:52:48,711 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140218217965376)>', '<ExcThread(monitor, started 140217772132096)>']
2025-02-24 23:52:55 (639923): Guest Log: 2025-02-24 22:52:49,461 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-24 23:52:55 (639923): Guest Log: 2025-02-24 22:52:49,462 | INFO     | [monitor] control thread has ended
2025-02-24 23:52:55 (639923): Guest Log: 2025-02-24 22:52:53,717 | INFO     | all workflow threads have been joined
2025-02-24 23:52:55 (639923): Guest Log: 2025-02-24 22:52:53,717 | INFO     | end of generic workflow (traces error code: 0)
2025-02-24 23:52:55 (639923): Guest Log: 2025-02-24 22:52:53,718 | INFO     | traces error code: 0
2025-02-24 23:52:55 (639923): Guest Log: 2025-02-24 22:52:53,718 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-24 23:52:55 (639923): Guest Log: 2025-02-24 22:52:53,842 [wrapper] ==== pilot stdout END ====
2025-02-24 23:52:55 (639923): Guest Log: 2025-02-24 22:52:53,847 [wrapper] ==== wrapper stdout RESUME ====
2025-02-24 23:52:55 (639923): Guest Log: 2025-02-24 22:52:53,851 [wrapper] pilotpid: 5791
2025-02-24 23:52:55 (639923): Guest Log: 2025-02-24 22:52:53,856 [wrapper] Pilot exit status: 0
2025-02-24 23:52:55 (639923): Guest Log: 2025-02-24 22:52:53,936 [wrapper] pandaids: 6527259178
2025-02-24 23:52:55 (639923): Guest Log: 2025-02-24 22:52:53,966 [wrapper] cleanup supervisor_pilot 13374 5792
2025-02-24 23:52:55 (639923): Guest Log: 2025-02-24 22:52:53,971 [wrapper] Test setup, not cleaning
2025-02-24 23:52:55 (639923): Guest Log: 2025-02-24 22:52:53,981 [wrapper] apfmon messages muted
2025-02-24 23:52:55 (639923): Guest Log: 2025-02-24 22:52:53,986 [wrapper] ==== wrapper stdout END ====
2025-02-24 23:52:55 (639923): Guest Log: 2025-02-24 22:52:53,991 [wrapper] ==== wrapper stderr END ====
2025-02-24 23:52:55 (639923): Guest Log:  *** Error codes and diagnostics ***
2025-02-24 23:52:55 (639923): Guest Log:     "exeErrorCode": 0,
2025-02-24 23:52:55 (639923): Guest Log:     "exeErrorDiag": "",
2025-02-24 23:52:55 (639923): Guest Log:     "pilotErrorCode": 0,
2025-02-24 23:52:55 (639923): Guest Log:     "pilotErrorDiag": "",
2025-02-24 23:52:55 (639923): Guest Log:  *** Listing of results directory ***
2025-02-24 23:52:55 (639923): Guest Log: total 349848
2025-02-24 23:52:55 (639923): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 23 17:37 pilot3.tar.gz
2025-02-24 23:52:55 (639923): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 23 17:53 queuedata.json
2025-02-24 23:52:55 (639923): Guest Log: -rwx------. 1 atlas atlas     35865 Feb 23 17:54 runpilot2-wrapper.sh
2025-02-24 23:52:55 (639923): Guest Log: -rw-r--r--. 1 atlas atlas      9697 Feb 24 03:25 init_data.xml
2025-02-24 23:52:55 (639923): Guest Log: -rw-r--r--. 1 atlas atlas    503563 Feb 24 03:25 input.tar.gz
2025-02-24 23:52:55 (639923): Guest Log: -rw-r--r--. 1 atlas atlas     17569 Feb 24 03:25 start_atlas.sh
2025-02-24 23:52:55 (639923): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 24 03:25 EVNT.43078917._002139.pool.root.1 -> /data/./ATLAS.root_0
2025-02-24 23:52:55 (639923): Guest Log: -rw-r--r--. 1 atlas atlas      2548 Feb 24 03:25 pandaJob.out
2025-02-24 23:52:55 (639923): Guest Log: -rw-------. 1 atlas atlas       456 Feb 24 03:25 setup.sh.local
2025-02-24 23:52:55 (639923): Guest Log: -rw-------. 1 atlas atlas    987712 Feb 24 03:27 agis_schedconf.cvmfs.json
2025-02-24 23:52:55 (639923): Guest Log: drwx------. 4 atlas atlas      4096 Feb 24 03:27 pilot3
2025-02-24 23:52:55 (639923): Guest Log: -rw-------. 1 atlas atlas 332503119 Feb 24 22:51 HITS.43078919._092030.pool.root.1
2025-02-24 23:52:55 (639923): Guest Log: -rw-------. 1 atlas atlas      1021 Feb 24 22:52 memory_monitor_summary.json
2025-02-24 23:52:55 (639923): Guest Log: -rw-------. 1 atlas atlas   1582569 Feb 24 22:52 agis_ddmendpoints.agis.ALL.json
2025-02-24 23:52:55 (639923): Guest Log: -rw-------. 1 atlas atlas    983542 Feb 24 22:52 log.43078919._092030.job.log.tgz.1
2025-02-24 23:52:55 (639923): Guest Log: -rw-------. 1 atlas atlas        96 Feb 24 22:52 pilot_heartbeat.json
2025-02-24 23:52:55 (639923): Guest Log: -rw-------. 1 atlas atlas      7726 Feb 24 22:52 heartbeat.json
2025-02-24 23:52:55 (639923): Guest Log: -rw-------. 1 atlas atlas      4275 Feb 24 22:52 pilotlog.txt
2025-02-24 23:52:55 (639923): Guest Log: -rw-------. 1 atlas atlas  10017462 Feb 24 22:52 log.43078919._092030.job.log.1
2025-02-24 23:52:55 (639923): Guest Log: -rw-------. 1 atlas atlas       357 Feb 24 22:52 output.list
2025-02-24 23:52:55 (639923): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 24 22:52 runtime_log
2025-02-24 23:52:55 (639923): Guest Log: -rw-------. 1 atlas atlas  11018240 Feb 24 22:52 result.tar.gz
2025-02-24 23:52:55 (639923): Guest Log: -rw-r--r--. 1 atlas atlas     11157 Feb 24 22:52 runtime_log.err
2025-02-24 23:52:55 (639923): Guest Log: -rw-------. 1 atlas atlas       658 Feb 24 22:52 3RLODmmMV66nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmbnvKDmRGTyIn.diag
2025-02-24 23:52:55 (639923): Guest Log: Looking for outputfile HITS.43078919._092030.pool.root.1
2025-02-24 23:52:55 (639923): Guest Log: HITS file was successfully produced
2025-02-24 23:52:55 (639923): Guest Log: -rw-------. 1 atlas atlas 332503119 Feb 24 22:51 /home/atlas/RunAtlas/HITS.43078919._092030.pool.root.1
2025-02-24 23:52:55 (639923): Guest Log: Successfully finished the ATLAS job!
2025-02-24 23:52:55 (639923): Guest Log: Copying the results back to the shared directory!
2025-02-24 23:52:55 (639923): Guest Log:  *** Contents of shared directory: ***
2025-02-24 23:52:55 (639923): Guest Log: total 347816
2025-02-24 23:52:55 (639923): Guest Log: -rw-r--r--. 1 root root 344602713 Feb 24 03:24 ATLAS.root_0
2025-02-24 23:52:55 (639923): Guest Log: -rw-r--r--. 1 root root      9697 Feb 24 03:24 init_data.xml
2025-02-24 23:52:55 (639923): Guest Log: -rw-r--r--. 1 root root    503563 Feb 24 03:24 input.tar.gz
2025-02-24 23:52:55 (639923): Guest Log: -rw-r--r--. 1 root root  11018240 Feb 24 22:52 result.tar.gz
2025-02-24 23:52:55 (639923): Guest Log: -rw-r--r--. 1 root root     17569 Feb 24 03:24 start_atlas.sh
2025-02-24 23:52:55 (639923): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-24 23:52:55 (639923): VM Completion File Detected.
2025-02-24 23:52:55 (639923): Powering off VM.
2025-02-24 23:52:55 (639923): Successfully stopped VM.
2025-02-24 23:52:55 (639923): Deregistering VM. (boinc_1bf06bdcb83c195b, slot#15)
2025-02-24 23:52:55 (639923): Removing network bandwidth throttle group from VM.
2025-02-24 23:52:55 (639923): Removing VM from VirtualBox.
23:53:00 (639923): called boinc_finish(0)

</stderr_txt>
]]>

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