Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-24 14:33:41 (17836): Detected: vboxwrapper 26206
2025-02-24 14:33:41 (17836): Detected: BOINC client v8.0.2
2025-02-24 14:33:41 (17836): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-02-24 14:33:42 (17836): Successfully copied 'init_data.xml' to the shared directory.
2025-02-24 14:33:42 (17836): Create VM. (boinc_587fc6263dbc6ee2, slot#4)
2025-02-24 14:33:43 (17836): Setting Memory Size for VM. (4200MB)
2025-02-24 14:33:43 (17836): Setting CPU Count for VM. (2)
2025-02-24 14:33:43 (17836): Setting Chipset Options for VM.
2025-02-24 14:33:43 (17836): Setting Graphics Controller Options for VM.
2025-02-24 14:33:44 (17836): Setting Boot Options for VM.
2025-02-24 14:33:44 (17836): Setting Network Configuration for NAT.
2025-02-24 14:33:44 (17836): Enabling VM Network Access.
2025-02-24 14:33:44 (17836): Disabling USB Support for VM.
2025-02-24 14:33:45 (17836): Disabling COM Port Support for VM.
2025-02-24 14:33:45 (17836): Disabling LPT Port Support for VM.
2025-02-24 14:33:45 (17836): Disabling Audio Support for VM.
2025-02-24 14:33:46 (17836): Disabling Clipboard Support for VM.
2025-02-24 14:33:46 (17836): Disabling Drag and Drop Support for VM.
2025-02-24 14:33:46 (17836): Adding storage controller(s) to VM.
2025-02-24 14:33:46 (17836): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-24 14:33:47 (17836): Adding VirtualBox Guest Additions to VM.
2025-02-24 14:33:47 (17836): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-24 14:33:48 (17836): forwarding host port 57441 to guest port 80
2025-02-24 14:33:48 (17836): Enabling remote desktop for VM.
2025-02-24 14:33:49 (17836): Required extension pack not installed, remote desktop not enabled.
2025-02-24 14:33:49 (17836): Enabling shared directory for VM.
2025-02-24 14:33:50 (17836): Starting VM using VBoxManage interface. (boinc_587fc6263dbc6ee2, slot#4)
2025-02-24 14:33:57 (17836): Successfully started VM. (PID = '4696')
2025-02-24 14:33:57 (17836): Reporting VM Process ID to BOINC.
2025-02-24 14:33:57 (17836): Guest Log: BIOS: VirtualBox 7.0.6
2025-02-24 14:33:57 (17836): Guest Log: CPUID EDX: 0x178bfbff
2025-02-24 14:33:57 (17836): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-24 14:33:57 (17836): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-24 14:33:57 (17836): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-24 14:33:57 (17836): Detected: Web Application Enabled (http://localhost:57441)
2025-02-24 14:33:57 (17836): Preference change detected
2025-02-24 14:33:57 (17836): Setting CPU throttle for VM. (100%)
2025-02-24 14:33:57 (17836): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-24 14:33:59 (17836): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-24 14:33:59 (17836): Guest Log: BIOS: Booting from Hard Disk...
2025-02-24 14:34:01 (17836): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-24 14:34:01 (17836): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-24 14:34:01 (17836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-24 14:34:01 (17836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-24 14:34:01 (17836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-24 14:34:01 (17836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-24 14:34:01 (17836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-24 14:34:01 (17836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-24 14:34:01 (17836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-24 14:34:01 (17836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-24 14:34:01 (17836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-24 14:34:01 (17836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-24 14:34:01 (17836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-24 14:34:01 (17836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-24 14:34:01 (17836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-24 14:34:01 (17836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-24 14:34:01 (17836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-24 14:34:01 (17836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-24 14:34:01 (17836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-24 14:34:01 (17836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-24 14:34:01 (17836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-24 14:34:01 (17836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-24 14:34:01 (17836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-24 14:34:01 (17836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-24 14:34:01 (17836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-24 14:34:01 (17836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-24 14:34:01 (17836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-24 14:34:01 (17836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-24 14:34:01 (17836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-24 14:34:01 (17836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-24 14:34:01 (17836): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-24 14:34:01 (17836): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-24 14:34:05 (17836): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-24 14:34:05 (17836): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-24 14:34:11 (17836): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-24 14:34:11 (17836): Guest Log: 00:00:00.000096 main     Log opened 2025-02-24T14:34:09.732411000Z
2025-02-24 14:34:11 (17836): Guest Log: 00:00:00.000172 main     OS Product: Linux
2025-02-24 14:34:11 (17836): Guest Log: 00:00:00.000200 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-24 14:34:11 (17836): Guest Log: 00:00:00.000222 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-24 14:34:11 (17836): Guest Log: 00:00:00.000243 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-24 14:34:11 (17836): Guest Log: 00:00:00.000244 main     Process ID: 1262
2025-02-24 14:34:11 (17836): Guest Log: 00:00:00.000244 main     Package type: LINUX_64BITS_GENERIC
2025-02-24 14:34:11 (17836): Guest Log: 00:00:00.001030 main     5.2.32 r132073 started. Verbose level = 0
2025-02-24 14:34:11 (17836): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-24 14:34:11 (17836): Guest Log: [INFO] Mounting shared directory
2025-02-24 14:34:11 (17836): Guest Log: [INFO] Checking for init_data.xml
2025-02-24 14:34:21 (17836): Guest Log: 00:00:10.002523 timesync vgsvcTimeSyncWorker: Radical guest time change: -39 588 511 421 000ns (GuestNow=1 740 368 061 223 191 000 ns GuestLast=1 740 407 649 734 612 000 ns fSetTimeLastLoop=true )
2025-02-24 14:34:22 (17836): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-24 14:34:22 (17836): Guest Log: [INFO] Detected branch: prod
2025-02-24 14:34:24 (17836): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-24 14:34:24 (17836): Guest Log: Copying input files
2025-02-24 14:34:24 (17836): Guest Log: Copied input files into RunAtlas.
2025-02-24 14:34:25 (17836): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-24 14:34:25 (17836): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-24 14:34:25 (17836): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-24 14:34:25 (17836): Guest Log: Further information can be found at the LHC@home message board.
2025-02-24 14:34:37 (17836): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-24 14:34:37 (17836): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-24 14:34:37 (17836): Guest Log: 2.6.3.0 1540 0 32160 142997 3 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-02-24 14:34:38 (17836): Guest Log: copied the webapp to /var/www
2025-02-24 14:34:38 (17836): Guest Log: ATHENA_PROC_NUMBER=2
2025-02-24 14:34:38 (17836): Guest Log: ATHENA_CORE_NUMBER=2
2025-02-24 14:34:39 (17836): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-24 14:34:39 (17836): Guest Log:  *** Starting ATLAS job. (PandaID=6523757173 taskID=43205094) ***
2025-02-24 16:26:47 (17836): Status Report: Elapsed Time: '6000.566166'
2025-02-24 16:26:47 (17836): Status Report: CPU Time: '10599.890625'
2025-02-24 18:07:47 (17836): Status Report: Elapsed Time: '12000.817951'
2025-02-24 18:07:47 (17836): Status Report: CPU Time: '22585.234375'
2025-02-24 19:48:46 (17836): Status Report: Elapsed Time: '18001.490997'
2025-02-24 19:48:46 (17836): Status Report: CPU Time: '34604.015625'
2025-02-24 21:30:02 (17836): Status Report: Elapsed Time: '24002.153730'
2025-02-24 21:30:02 (17836): Status Report: CPU Time: '46618.359375'
2025-02-24 23:12:57 (17836): Status Report: Elapsed Time: '30002.486729'
2025-02-24 23:12:57 (17836): Status Report: CPU Time: '58818.531250'
2025-02-25 00:54:28 (17836): Status Report: Elapsed Time: '36003.219040'
2025-02-25 00:54:28 (17836): Status Report: CPU Time: '70896.328125'
2025-02-25 02:35:48 (17836): Status Report: Elapsed Time: '42003.868332'
2025-02-25 02:35:48 (17836): Status Report: CPU Time: '82961.796875'
2025-02-25 04:16:32 (17836): Status Report: Elapsed Time: '48004.757116'
2025-02-25 04:16:32 (17836): Status Report: CPU Time: '94972.703125'
2025-02-25 05:57:20 (17836): Status Report: Elapsed Time: '54005.205717'
2025-02-25 05:57:20 (17836): Status Report: CPU Time: '106907.437500'
2025-02-25 05:58:58 (17836): Guest Log:  *** Job finished ***
2025-02-25 05:58:58 (17836): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-25 05:58:58 (17836): Guest Log: 2025-02-24 18:58:25,043 | INFO     | [payload] control thread has finished
2025-02-25 05:58:58 (17836): Guest Log: 2025-02-24 18:58:25,397 | INFO     | [payload] validate_post thread has finished
2025-02-25 05:58:58 (17836): Guest Log: 2025-02-24 18:58:27,267 | INFO     | [data] queue_monitor thread has finished
2025-02-25 05:58:58 (17836): Guest Log: 2025-02-24 18:58:28,548 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140386623985472)>', '<ExcThread(monitor, started 140385938552576)>']
2025-02-25 05:58:58 (17836): Guest Log: 2025-02-24 18:58:28,948 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-25 05:58:58 (17836): Guest Log: 2025-02-24 18:58:28,949 | INFO     | [monitor] control thread has ended
2025-02-25 05:58:58 (17836): Guest Log: 2025-02-24 18:58:33,554 | INFO     | all workflow threads have been joined
2025-02-25 05:58:58 (17836): Guest Log: 2025-02-24 18:58:33,554 | INFO     | end of generic workflow (traces error code: 0)
2025-02-25 05:58:58 (17836): Guest Log: 2025-02-24 18:58:33,554 | INFO     | traces error code: 0
2025-02-25 05:58:58 (17836): Guest Log: 2025-02-24 18:58:33,554 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-25 05:58:58 (17836): Guest Log: 2025-02-24 18:58:33,665 [wrapper] ==== pilot stdout END ====
2025-02-25 05:58:58 (17836): Guest Log: 2025-02-24 18:58:33,669 [wrapper] ==== wrapper stdout RESUME ====
2025-02-25 05:58:58 (17836): Guest Log: 2025-02-24 18:58:33,673 [wrapper] pilotpid: 5843
2025-02-25 05:58:58 (17836): Guest Log: 2025-02-24 18:58:33,676 [wrapper] Pilot exit status: 0
2025-02-25 05:58:58 (17836): Guest Log: 2025-02-24 18:58:34,119 [wrapper] pandaids: 6523757173
2025-02-25 05:58:58 (17836): Guest Log: 2025-02-24 18:58:34,144 [wrapper] cleanup supervisor_pilot 14008 5844
2025-02-25 05:58:58 (17836): Guest Log: 2025-02-24 18:58:34,147 [wrapper] Test setup, not cleaning
2025-02-25 05:58:58 (17836): Guest Log: 2025-02-24 18:58:34,155 [wrapper] apfmon messages muted
2025-02-25 05:58:58 (17836): Guest Log: 2025-02-24 18:58:34,159 [wrapper] ==== wrapper stdout END ====
2025-02-25 05:58:58 (17836): Guest Log: 2025-02-24 18:58:34,162 [wrapper] ==== wrapper stderr END ====
2025-02-25 05:58:58 (17836): Guest Log:  *** Error codes and diagnostics ***
2025-02-25 05:58:58 (17836): Guest Log:     "exeErrorCode": 0,
2025-02-25 05:58:58 (17836): Guest Log:     "exeErrorDiag": "",
2025-02-25 05:58:58 (17836): Guest Log:     "pilotErrorCode": 0,
2025-02-25 05:58:58 (17836): Guest Log:     "pilotErrorDiag": "",
2025-02-25 05:58:58 (17836): Guest Log:  *** Listing of results directory ***
2025-02-25 05:58:58 (17836): Guest Log: total 347884
2025-02-25 05:58:58 (17836): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 23 05:04 pilot3.tar.gz
2025-02-25 05:58:58 (17836): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 23 05:10 queuedata.json
2025-02-25 05:58:59 (17836): Guest Log: -rwx------. 1 atlas atlas     35865 Feb 23 05:11 runpilot2-wrapper.sh
2025-02-25 05:58:59 (17836): Guest Log: -rwxr-xr-x. 1 atlas atlas      9002 Feb 24 03:34 init_data.xml
2025-02-25 05:58:59 (17836): Guest Log: -rwxr-xr-x. 1 atlas atlas    503562 Feb 24 03:34 input.tar.gz
2025-02-25 05:58:59 (17836): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb 24 03:34 start_atlas.sh
2025-02-25 05:58:59 (17836): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 24 03:34 EVNT.43092757._001952.pool.root.1 -> /data/./ATLAS.root_0
2025-02-25 05:58:59 (17836): Guest Log: -rw-r--r--. 1 atlas atlas      2548 Feb 24 03:34 pandaJob.out
2025-02-25 05:58:59 (17836): Guest Log: -rw-------. 1 atlas atlas       424 Feb 24 03:34 setup.sh.local
2025-02-25 05:58:59 (17836): Guest Log: -rw-------. 1 atlas atlas    987712 Feb 24 03:36 agis_schedconf.cvmfs.json
2025-02-25 05:58:59 (17836): Guest Log: drwx------. 4 atlas atlas      4096 Feb 24 03:37 pilot3
2025-02-25 05:58:59 (17836): Guest Log: -rw-------. 1 atlas atlas 331028968 Feb 24 18:57 HITS.43205094._038153.pool.root.1
2025-02-25 05:58:59 (17836): Guest Log: -rw-------. 1 atlas atlas      1033 Feb 24 18:57 memory_monitor_summary.json
2025-02-25 05:58:59 (17836): Guest Log: -rw-------. 1 atlas atlas   1582569 Feb 24 18:58 agis_ddmendpoints.agis.ALL.json
2025-02-25 05:58:59 (17836): Guest Log: -rw-------. 1 atlas atlas    856417 Feb 24 18:58 log.43205094._038153.job.log.tgz.1
2025-02-25 05:58:59 (17836): Guest Log: -rw-------. 1 atlas atlas        95 Feb 24 18:58 pilot_heartbeat.json
2025-02-25 05:58:59 (17836): Guest Log: -rw-------. 1 atlas atlas      7705 Feb 24 18:58 heartbeat.json
2025-02-25 05:58:59 (17836): Guest Log: -rw-------. 1 atlas atlas      4398 Feb 24 18:58 pilotlog.txt
2025-02-25 05:58:59 (17836): Guest Log: -rw-------. 1 atlas atlas   9875064 Feb 24 18:58 log.43205094._038153.job.log.1
2025-02-25 05:58:59 (17836): Guest Log: -rw-------. 1 atlas atlas       357 Feb 24 18:58 output.list
2025-02-25 05:58:59 (17836): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 24 18:58 runtime_log
2025-02-25 05:58:59 (17836): Guest Log: -rw-------. 1 atlas atlas  10752000 Feb 24 18:58 result.tar.gz
2025-02-25 05:58:59 (17836): Guest Log: -rw-r--r--. 1 atlas atlas     10966 Feb 24 18:58 runtime_log.err
2025-02-25 05:58:59 (17836): Guest Log: -rw-------. 1 atlas atlas       669 Feb 24 18:58 lrQKDmeSJ66nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmv3uKDmCKDt3m.diag
2025-02-25 05:58:59 (17836): Guest Log: Looking for outputfile HITS.43205094._038153.pool.root.1
2025-02-25 05:58:59 (17836): Guest Log: HITS file was successfully produced
2025-02-25 05:58:59 (17836): Guest Log: -rw-------. 1 atlas atlas 331028968 Feb 24 18:57 /home/atlas/RunAtlas/HITS.43205094._038153.pool.root.1
2025-02-25 05:58:59 (17836): Guest Log: Successfully finished the ATLAS job!
2025-02-25 05:58:59 (17836): Guest Log: Copying the results back to the shared directory!
2025-02-25 05:58:59 (17836): Guest Log:  *** Contents of shared directory: ***
2025-02-25 05:58:59 (17836): Guest Log: total 668876
2025-02-25 05:58:59 (17836): Guest Log: -rwxrwxrwx. 1 root root 342607883 Feb 24 03:33 ATLAS.root_0
2025-02-25 05:58:59 (17836): Guest Log: -rwxrwxrwx. 1 root root 331028968 Feb 24  2025 HITS.pool.root.1
2025-02-25 05:58:59 (17836): Guest Log: -rwxrwxrwx. 1 root root      9002 Feb 24 03:33 init_data.xml
2025-02-25 05:58:59 (17836): Guest Log: -rwxrwxrwx. 1 root root    503562 Feb 24 03:20 input.tar.gz
2025-02-25 05:58:59 (17836): Guest Log: -rwxrwxrwx. 1 root root  10752000 Feb 24  2025 result.tar.gz
2025-02-25 05:58:59 (17836): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb 24 03:20 start_atlas.sh
2025-02-25 05:58:59 (17836): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-25 05:58:59 (17836): VM Completion File Detected.
2025-02-25 05:58:59 (17836): Powering off VM.
2025-02-25 05:59:00 (17836): Successfully stopped VM.
2025-02-25 05:59:00 (17836): Deregistering VM. (boinc_587fc6263dbc6ee2, slot#4)
2025-02-25 05:59:01 (17836): Removing network bandwidth throttle group from VM.
2025-02-25 05:59:01 (17836): Removing VM from VirtualBox.
05:59:06 (17836): called boinc_finish(0)

</stderr_txt>
]]>

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