Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-24 13:54:07 (9820): Detected: vboxwrapper 26206
2025-02-24 13:54:07 (9820): Detected: BOINC client v8.0.2
2025-02-24 13:54:07 (9820): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-02-24 13:54:08 (9820): Successfully copied 'init_data.xml' to the shared directory.
2025-02-24 13:54:08 (9820): Create VM. (boinc_5023657d123ad2a2, slot#11)
2025-02-24 13:54:09 (9820): Setting Memory Size for VM. (4200MB)
2025-02-24 13:54:09 (9820): Setting CPU Count for VM. (2)
2025-02-24 13:54:09 (9820): Setting Chipset Options for VM.
2025-02-24 13:54:10 (9820): Setting Graphics Controller Options for VM.
2025-02-24 13:54:10 (9820): Setting Boot Options for VM.
2025-02-24 13:54:10 (9820): Setting Network Configuration for NAT.
2025-02-24 13:54:10 (9820): Enabling VM Network Access.
2025-02-24 13:54:11 (9820): Disabling USB Support for VM.
2025-02-24 13:54:11 (9820): Disabling COM Port Support for VM.
2025-02-24 13:54:11 (9820): Disabling LPT Port Support for VM.
2025-02-24 13:54:11 (9820): Disabling Audio Support for VM.
2025-02-24 13:54:12 (9820): Disabling Clipboard Support for VM.
2025-02-24 13:54:12 (9820): Disabling Drag and Drop Support for VM.
2025-02-24 13:54:12 (9820): Adding storage controller(s) to VM.
2025-02-24 13:54:12 (9820): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-24 13:54:13 (9820): Adding VirtualBox Guest Additions to VM.
2025-02-24 13:54:13 (9820): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-24 13:54:14 (9820): forwarding host port 57208 to guest port 80
2025-02-24 13:54:14 (9820): Enabling remote desktop for VM.
2025-02-24 13:54:14 (9820): Required extension pack not installed, remote desktop not enabled.
2025-02-24 13:54:14 (9820): Enabling shared directory for VM.
2025-02-24 13:54:15 (9820): Starting VM using VBoxManage interface. (boinc_5023657d123ad2a2, slot#11)
2025-02-24 13:54:21 (9820): Successfully started VM. (PID = '17716')
2025-02-24 13:54:21 (9820): Reporting VM Process ID to BOINC.
2025-02-24 13:54:21 (9820): Guest Log: BIOS: VirtualBox 7.0.6
2025-02-24 13:54:21 (9820): Guest Log: CPUID EDX: 0x178bfbff
2025-02-24 13:54:21 (9820): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-24 13:54:21 (9820): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-24 13:54:21 (9820): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-24 13:54:21 (9820): Detected: Web Application Enabled (http://localhost:57208)
2025-02-24 13:54:21 (9820): Preference change detected
2025-02-24 13:54:21 (9820): Setting CPU throttle for VM. (100%)
2025-02-24 13:54:22 (9820): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-24 13:54:24 (9820): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-24 13:54:24 (9820): Guest Log: BIOS: Booting from Hard Disk...
2025-02-24 13:54:26 (9820): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-24 13:54:26 (9820): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-24 13:54:26 (9820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-24 13:54:26 (9820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-24 13:54:26 (9820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-24 13:54:26 (9820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-24 13:54:26 (9820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-24 13:54:26 (9820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-24 13:54:26 (9820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-24 13:54:26 (9820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-24 13:54:26 (9820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-24 13:54:26 (9820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-24 13:54:26 (9820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-24 13:54:26 (9820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-24 13:54:26 (9820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-24 13:54:26 (9820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-24 13:54:26 (9820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-24 13:54:26 (9820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-24 13:54:26 (9820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-24 13:54:26 (9820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-24 13:54:26 (9820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-24 13:54:26 (9820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-24 13:54:26 (9820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-24 13:54:26 (9820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-24 13:54:26 (9820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-24 13:54:26 (9820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-24 13:54:26 (9820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-24 13:54:26 (9820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-24 13:54:26 (9820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-24 13:54:26 (9820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-24 13:54:26 (9820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-24 13:54:26 (9820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-24 13:54:31 (9820): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-24 13:54:31 (9820): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-24 13:54:37 (9820): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-24 13:54:37 (9820): Guest Log: 00:00:00.000074 main     Log opened 2025-02-24T13:54:34.505811000Z
2025-02-24 13:54:37 (9820): Guest Log: 00:00:00.000140 main     OS Product: Linux
2025-02-24 13:54:37 (9820): Guest Log: 00:00:00.000163 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-24 13:54:37 (9820): Guest Log: 00:00:00.000180 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-24 13:54:37 (9820): Guest Log: 00:00:00.000197 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-24 13:54:37 (9820): Guest Log: 00:00:00.000198 main     Process ID: 1262
2025-02-24 13:54:37 (9820): Guest Log: 00:00:00.000198 main     Package type: LINUX_64BITS_GENERIC
2025-02-24 13:54:37 (9820): Guest Log: 00:00:00.001142 main     5.2.32 r132073 started. Verbose level = 0
2025-02-24 13:54:37 (9820): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-24 13:54:37 (9820): Guest Log: [INFO] Mounting shared directory
2025-02-24 13:54:37 (9820): Guest Log: [INFO] Checking for init_data.xml
2025-02-24 13:54:45 (9820): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-24 13:54:45 (9820): Guest Log: [INFO] Detected branch: prod
2025-02-24 13:54:46 (9820): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-24 13:54:46 (9820): Guest Log: Copying input files
2025-02-24 13:54:47 (9820): Guest Log: 00:00:10.002814 timesync vgsvcTimeSyncWorker: Radical guest time change: -39 588 167 403 000ns (GuestNow=1 740 365 686 340 555 000 ns GuestLast=1 740 405 274 507 958 000 ns fSetTimeLastLoop=true )
2025-02-24 13:54:47 (9820): Guest Log: Copied input files into RunAtlas.
2025-02-24 13:54:47 (9820): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-24 13:54:47 (9820): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-24 13:54:47 (9820): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-24 13:54:47 (9820): Guest Log: Further information can be found at the LHC@home message board.
2025-02-24 13:55:00 (9820): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-24 13:55:00 (9820): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-24 13:55:00 (9820): Guest Log: 2.6.3.0 1539 0 32092 142995 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-02-24 13:55:00 (9820): Guest Log: copied the webapp to /var/www
2025-02-24 13:55:01 (9820): Guest Log: ATHENA_PROC_NUMBER=2
2025-02-24 13:55:01 (9820): Guest Log: ATHENA_CORE_NUMBER=2
2025-02-24 13:55:01 (9820): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-24 13:55:01 (9820): Guest Log:  *** Starting ATLAS job. (PandaID=6523728812 taskID=43205094) ***
2025-02-24 15:41:32 (9820): Status Report: Elapsed Time: '6000.313292'
2025-02-24 15:41:32 (9820): Status Report: CPU Time: '9998.703125'
2025-02-24 17:27:30 (9820): Status Report: Elapsed Time: '12000.603048'
2025-02-24 17:27:30 (9820): Status Report: CPU Time: '22584.437500'
2025-02-24 19:08:28 (9820): Status Report: Elapsed Time: '18001.124228'
2025-02-24 19:08:28 (9820): Status Report: CPU Time: '34593.078125'
2025-02-24 20:49:29 (9820): Status Report: Elapsed Time: '24001.515478'
2025-02-24 20:49:29 (9820): Status Report: CPU Time: '46594.718750'
2025-02-24 22:32:13 (9820): Status Report: Elapsed Time: '30002.200155'
2025-02-24 22:32:13 (9820): Status Report: CPU Time: '58768.875000'
2025-02-25 00:13:53 (9820): Status Report: Elapsed Time: '36002.690886'
2025-02-25 00:13:53 (9820): Status Report: CPU Time: '70850.875000'
2025-02-25 01:55:19 (9820): Status Report: Elapsed Time: '42002.917402'
2025-02-25 01:55:19 (9820): Status Report: CPU Time: '82917.531250'
2025-02-25 03:35:57 (9820): Status Report: Elapsed Time: '48003.649670'
2025-02-25 03:35:57 (9820): Status Report: CPU Time: '94932.109375'
2025-02-25 05:00:08 (9820): Guest Log:  *** Job finished ***
2025-02-25 05:00:08 (9820): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-25 05:00:08 (9820): Guest Log: 2025-02-24 17:59:39,943 | INFO     | [payload] control thread has finished
2025-02-25 05:00:08 (9820): Guest Log: 2025-02-24 17:59:40,133 | INFO     | [payload] run_realtimelog thread has finished
2025-02-25 05:00:08 (9820): Guest Log: 2025-02-24 17:59:43,097 | INFO     | [data] queue_monitor thread has finished
2025-02-25 05:00:08 (9820): Guest Log: 2025-02-24 17:59:43,533 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139986416371520)>', '<ExcThread(monitor, started 139985525139200)>']
2025-02-25 05:00:08 (9820): Guest Log: 2025-02-24 17:59:43,859 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-25 05:00:08 (9820): Guest Log: 2025-02-24 17:59:43,860 | INFO     | [monitor] control thread has ended
2025-02-25 05:00:08 (9820): Guest Log: 2025-02-24 17:59:48,537 | INFO     | all workflow threads have been joined
2025-02-25 05:00:08 (9820): Guest Log: 2025-02-24 17:59:48,538 | INFO     | end of generic workflow (traces error code: 0)
2025-02-25 05:00:08 (9820): Guest Log: 2025-02-24 17:59:48,538 | INFO     | traces error code: 0
2025-02-25 05:00:08 (9820): Guest Log: 2025-02-24 17:59:48,538 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-25 05:00:08 (9820): Guest Log: 2025-02-24 17:59:48,647 [wrapper] ==== pilot stdout END ====
2025-02-25 05:00:08 (9820): Guest Log: 2025-02-24 17:59:48,651 [wrapper] ==== wrapper stdout RESUME ====
2025-02-25 05:00:08 (9820): Guest Log: 2025-02-24 17:59:48,654 [wrapper] pilotpid: 5859
2025-02-25 05:00:08 (9820): Guest Log: 2025-02-24 17:59:48,657 [wrapper] Pilot exit status: 0
2025-02-25 05:00:08 (9820): Guest Log: 2025-02-24 17:59:49,121 [wrapper] pandaids: 6523728812
2025-02-25 05:00:08 (9820): Guest Log: 2025-02-24 17:59:49,144 [wrapper] cleanup supervisor_pilot 11203 5860
2025-02-25 05:00:08 (9820): Guest Log: 2025-02-24 17:59:49,148 [wrapper] Test setup, not cleaning
2025-02-25 05:00:08 (9820): Guest Log: 2025-02-24 17:59:49,155 [wrapper] apfmon messages muted
2025-02-25 05:00:08 (9820): Guest Log: 2025-02-24 17:59:49,159 [wrapper] ==== wrapper stdout END ====
2025-02-25 05:00:08 (9820): Guest Log: 2025-02-24 17:59:49,162 [wrapper] ==== wrapper stderr END ====
2025-02-25 05:00:08 (9820): Guest Log:  *** Error codes and diagnostics ***
2025-02-25 05:00:08 (9820): Guest Log:     "exeErrorCode": 0,
2025-02-25 05:00:08 (9820): Guest Log:     "exeErrorDiag": "",
2025-02-25 05:00:08 (9820): Guest Log:     "pilotErrorCode": 0,
2025-02-25 05:00:08 (9820): Guest Log:     "pilotErrorDiag": "",
2025-02-25 05:00:08 (9820): Guest Log:  *** Listing of results directory ***
2025-02-25 05:00:08 (9820): Guest Log: total 332124
2025-02-25 05:00:08 (9820): Guest Log: -rwx------. 1 atlas atlas     35865 Feb 23 04:32 runpilot2-wrapper.sh
2025-02-25 05:00:08 (9820): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 23 04:32 queuedata.json
2025-02-25 05:00:08 (9820): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 23 04:32 pilot3.tar.gz
2025-02-25 05:00:08 (9820): Guest Log: -rwxr-xr-x. 1 atlas atlas      9004 Feb 24 02:54 init_data.xml
2025-02-25 05:00:08 (9820): Guest Log: -rwxr-xr-x. 1 atlas atlas    503549 Feb 24 02:54 input.tar.gz
2025-02-25 05:00:08 (9820): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb 24 02:54 start_atlas.sh
2025-02-25 05:00:08 (9820): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 24 02:54 EVNT.43092757._001867.pool.root.1 -> /data/./ATLAS.root_0
2025-02-25 05:00:08 (9820): Guest Log: -rw-r--r--. 1 atlas atlas      2547 Feb 24 02:55 pandaJob.out
2025-02-25 05:00:08 (9820): Guest Log: -rw-------. 1 atlas atlas       424 Feb 24 02:55 setup.sh.local
2025-02-25 05:00:08 (9820): Guest Log: -rw-------. 1 atlas atlas    987720 Feb 24 02:56 agis_schedconf.cvmfs.json
2025-02-25 05:00:08 (9820): Guest Log: drwx------. 4 atlas atlas      4096 Feb 24 02:57 pilot3
2025-02-25 05:00:08 (9820): Guest Log: -rw-------. 1 atlas atlas 319637648 Feb 24 17:58 HITS.43205094._038016.pool.root.1
2025-02-25 05:00:08 (9820): Guest Log: -rw-------. 1 atlas atlas        95 Feb 24 17:58 pilot_heartbeat.json
2025-02-25 05:00:08 (9820): Guest Log: -rw-------. 1 atlas atlas      1033 Feb 24 17:58 memory_monitor_summary.json
2025-02-25 05:00:08 (9820): Guest Log: -rw-------. 1 atlas atlas   1582569 Feb 24 17:59 agis_ddmendpoints.agis.ALL.json
2025-02-25 05:00:08 (9820): Guest Log: -rw-------. 1 atlas atlas    795976 Feb 24 17:59 log.43205094._038016.job.log.tgz.1
2025-02-25 05:00:08 (9820): Guest Log: -rw-------. 1 atlas atlas      7721 Feb 24 17:59 heartbeat.json
2025-02-25 05:00:08 (9820): Guest Log: -rw-------. 1 atlas atlas      4398 Feb 24 17:59 pilotlog.txt
2025-02-25 05:00:08 (9820): Guest Log: -rw-------. 1 atlas atlas   7562768 Feb 24 17:59 log.43205094._038016.job.log.1
2025-02-25 05:00:08 (9820): Guest Log: -rw-------. 1 atlas atlas       357 Feb 24 17:59 output.list
2025-02-25 05:00:08 (9820): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 24 17:59 runtime_log
2025-02-25 05:00:08 (9820): Guest Log: -rw-------. 1 atlas atlas   8376320 Feb 24 17:59 result.tar.gz
2025-02-25 05:00:08 (9820): Guest Log: -rw-r--r--. 1 atlas atlas     10966 Feb 24 17:59 runtime_log.err
2025-02-25 05:00:08 (9820): Guest Log: -rw-------. 1 atlas atlas       669 Feb 24 17:59 f8mMDmQqI66nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmS1uKDmUXoV7n.diag
2025-02-25 05:00:08 (9820): Guest Log: Looking for outputfile HITS.43205094._038016.pool.root.1
2025-02-25 05:00:08 (9820): Guest Log: HITS file was successfully produced
2025-02-25 05:00:08 (9820): Guest Log: -rw-------. 1 atlas atlas 319637648 Feb 24 17:58 /home/atlas/RunAtlas/HITS.43205094._038016.pool.root.1
2025-02-25 05:00:09 (9820): Guest Log: Successfully finished the ATLAS job!
2025-02-25 05:00:09 (9820): Guest Log: Copying the results back to the shared directory!
2025-02-25 05:00:09 (9820): Guest Log:  *** Contents of shared directory: ***
2025-02-25 05:00:09 (9820): Guest Log: total 653284
2025-02-25 05:00:09 (9820): Guest Log: -rwxrwxrwx. 1 root root 340408199 Feb 24 02:54 ATLAS.root_0
2025-02-25 05:00:09 (9820): Guest Log: -rwxrwxrwx. 1 root root 319637648 Feb 24  2025 HITS.pool.root.1
2025-02-25 05:00:09 (9820): Guest Log: -rwxrwxrwx. 1 root root      9004 Feb 24 02:54 init_data.xml
2025-02-25 05:00:09 (9820): Guest Log: -rwxrwxrwx. 1 root root    503549 Feb 24 02:42 input.tar.gz
2025-02-25 05:00:09 (9820): Guest Log: -rwxrwxrwx. 1 root root   8376320 Feb 24  2025 result.tar.gz
2025-02-25 05:00:09 (9820): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb 24 02:42 start_atlas.sh
2025-02-25 05:00:09 (9820): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-25 05:00:09 (9820): VM Completion File Detected.
2025-02-25 05:00:09 (9820): Powering off VM.
2025-02-25 05:00:10 (9820): Successfully stopped VM.
2025-02-25 05:00:10 (9820): Deregistering VM. (boinc_5023657d123ad2a2, slot#11)
2025-02-25 05:00:10 (9820): Removing network bandwidth throttle group from VM.
2025-02-25 05:00:11 (9820): Removing VM from VirtualBox.
05:00:16 (9820): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN